Nuclear pore complex protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51200 AT5G51200 AT5G51200 |
| fragaria_vesca | FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 |
| malus_domestica | MD02G1032900.v1.1 |
| prunus_persica | Prupe.7G242500_v2.0.a1 |
| pyrus_communis | pycom02g02700 |
| rosa_chinensis | RchiOBHm_Chr2g0088511 RchiOBHm_Chr5g0006961 RchiOBHm_Chr5g0007071 RchiOBHm_Chr5g0007211 RchiOBHm_Chr5g0007281 RchiOBHm_Chr5g0007291 RchiOBHm_Chr5g0007331 |
| rosa_laevigata | RLG00000015961 RLG00000031440 RLG00000031448 RLG00000031451 |
| rosa_multiflora | Rmu_sc0002566.1_g000004 Rmu_sc0004733.1_g000009 Rmu_sc0026502.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00152620 |
| rosa_rugosa | Rorug01G0484700 Rorug01G0484800 Rorug01G0484900 Rorug04G0425700 |
| rosa_samantha | Rh2AG039700 Rh2BG038600 Rh2CG039800 Rh2DG039100 Rh5AG053000 Rh5AG053400 Rh5AG054100 Rh5AG054500 Rh5CG060600 Rh5CG061000 |
| rosa_wichuraiana | Rw2G003100 Rw5G005170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 107 |
| AclWI | GGATC | 1 cut(s) | 68 |
| AfaI | GTAC | 1 cut(s) | 126 |
| AflIII | ACRYGT | 1 cut(s) | 22 |
| AgsI | TTSAA | 1 cut(s) | 91 |
| AhlI | ACTAGT | 1 cut(s) | 13 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 33, 65 |
| AluBI | AGCT | 1 cut(s) | 60 |
| AluI | AGCT | 1 cut(s) | 60 |
| AlwI | GGATC | 1 cut(s) | 68 |
| AoxI | GGCC | 1 cut(s) | 118 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 35 |
| AspS9I | GGNCC | 1 cut(s) | 119 |
| AsuC2I | CCSGG | 1 cut(s) | 122 |
| BanI | GGYRCC | 1 cut(s) | 107 |
| BbsI | GAAGAC | 2 cut(s) | 28, 98 |
| BcnI | CCSGG | 1 cut(s) | 122 |
| BcuI | ACTAGT | 1 cut(s) | 13 |
| BfaI | CTAG | 1 cut(s) | 14 |
| Bme1390I | CCNGG | 1 cut(s) | 122 |
| BmgT120I | GGNCC | 1 cut(s) | 119 |
| BmiI | GGNNCC | 1 cut(s) | 109 |
| BmrFI | CCNGG | 1 cut(s) | 122 |
| BmsI | GCATC | 1 cut(s) | 77 |
| BpiI | GAAGAC | 2 cut(s) | 28, 98 |
| BpuMI | CCSGG | 1 cut(s) | 122 |
| BshFI | GGCC | 1 cut(s) | 120 |
| BshNI | GGYRCC | 1 cut(s) | 107 |
| BsiSI | CCGG | 1 cut(s) | 122 |
| BsnI | GGCC | 1 cut(s) | 120 |
| Bsp143I | GATC | 1 cut(s) | 73 |
| BspANI | GGCC | 1 cut(s) | 120 |
| BspLI | GGNNCC | 1 cut(s) | 109 |
| BspPI | GGATC | 1 cut(s) | 68 |
| BspT107I | GGYRCC | 1 cut(s) | 107 |
| BssMI | GATC | 1 cut(s) | 73 |
| Bst4CI | ACNGT | 1 cut(s) | 116 |
| BstKTI | GATC | 1 cut(s) | 76 |
| BstMBI | GATC | 1 cut(s) | 73 |
| BstNSI | RCATGY | 1 cut(s) | 26 |
| BstSCI | CCNGG | 1 cut(s) | 120 |
| BstV2I | GAAGAC | 2 cut(s) | 28, 98 |
| BsuRI | GGCC | 1 cut(s) | 120 |
| Cfr13I | GGNCC | 1 cut(s) | 119 |
| Csp6I | GTAC | 1 cut(s) | 125 |
| CviAII | CATG | 1 cut(s) | 23 |
| CviJI | RGCY | 3 cut(s) | 45, 60, 120 |
| CviKI_1 | RGCY | 3 cut(s) | 45, 60, 120 |
| CviQI | GTAC | 1 cut(s) | 125 |
| DpnI | GATC | 1 cut(s) | 75 |
| DpnII | GATC | 1 cut(s) | 73 |
| FaeI | CATG | 1 cut(s) | 26 |
| FaiI | YATR | 3 cut(s) | 24, 57, 134 |
| FatI | CATG | 1 cut(s) | 22 |
| FspBI | CTAG | 1 cut(s) | 14 |
| HaeIII | GGCC | 1 cut(s) | 120 |
| HapII | CCGG | 1 cut(s) | 122 |
| Hin1II | CATG | 1 cut(s) | 26 |
| HpaII | CCGG | 1 cut(s) | 122 |
| Hpy188I | TCNGA | 1 cut(s) | 73 |
| HpyCH4III | ACNGT | 1 cut(s) | 116 |
| Hsp92II | CATG | 1 cut(s) | 26 |
| Kzo9I | GATC | 1 cut(s) | 73 |
| LpnPI | CCDG | 1 cut(s) | 135 |
| LweI | GCATC | 1 cut(s) | 77 |
| MaeI | CTAG | 1 cut(s) | 14 |
| MaeIII | GTNAC | 1 cut(s) | 3 |
| MalI | GATC | 1 cut(s) | 75 |
| MboI | GATC | 1 cut(s) | 73 |
| MboII | GAAGA | 2 cut(s) | 28, 103 |
| MluCI | AATT | 1 cut(s) | 96 |
| MnlI | CCTC | 1 cut(s) | 90 |
| MroXI | GAANNNNTTC | 1 cut(s) | 35 |
| MspI | CCGG | 1 cut(s) | 122 |
| MspR9I | CCNGG | 1 cut(s) | 122 |
| NciI | CCSGG | 1 cut(s) | 122 |
| NdeII | GATC | 1 cut(s) | 73 |
| NlaIII | CATG | 1 cut(s) | 26 |
| NlaIV | GGNNCC | 1 cut(s) | 109 |
| NspI | RCATGY | 1 cut(s) | 26 |
| PciI | ACATGT | 1 cut(s) | 22 |
| PdmI | GAANNNNTTC | 1 cut(s) | 35 |
| PscI | ACATGT | 1 cut(s) | 22 |
| PspN4I | GGNNCC | 1 cut(s) | 109 |
| PspPI | GGNCC | 1 cut(s) | 119 |
| RsaI | GTAC | 1 cut(s) | 126 |
| RsaNI | GTAC | 1 cut(s) | 125 |
| Sau3AI | GATC | 1 cut(s) | 73 |
| Sau96I | GGNCC | 1 cut(s) | 119 |
| ScrFI | CCNGG | 1 cut(s) | 122 |
| SetI | ASST | 1 cut(s) | 62 |
| SfaNI | GCATC | 1 cut(s) | 77 |
| SgeI | CNNG | 6 cut(s) | 26, 35, 93, 133, 134, 140 |
| SpeI | ACTAGT | 1 cut(s) | 13 |
| Sse9I | AATT | 1 cut(s) | 96 |
| SspMI | CTAG | 1 cut(s) | 14 |
| StyD4I | CCNGG | 1 cut(s) | 120 |
| TaaI | ACNGT | 1 cut(s) | 116 |
| TasI | AATT | 1 cut(s) | 96 |
| XceI | RCATGY | 1 cut(s) | 26 |
| XmnI | GAANNNNTTC | 1 cut(s) | 35 |
| XspI | CTAG | 1 cut(s) | 14 |