Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51200 AT5G51200 AT5G51200 |
| fragaria_vesca | FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 FvH4_1g03320 |
| malus_domestica | MD02G1032900.v1.1 |
| prunus_persica | Prupe.7G242500_v2.0.a1 |
| pyrus_communis | pycom02g02700 |
| rosa_chinensis | RchiOBHm_Chr2g0088511 RchiOBHm_Chr5g0006961 RchiOBHm_Chr5g0007071 RchiOBHm_Chr5g0007211 RchiOBHm_Chr5g0007281 RchiOBHm_Chr5g0007291 RchiOBHm_Chr5g0007331 |
| rosa_laevigata | RLG00000015961 RLG00000031440 RLG00000031448 RLG00000031451 |
| rosa_multiflora | Rmu_sc0002566.1_g000004 Rmu_sc0004733.1_g000009 Rmu_sc0026502.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00152620 |
| rosa_rugosa | Rorug01G0484700 Rorug01G0484800 Rorug01G0484900 Rorug04G0425700 |
| rosa_samantha | Rh2AG039700 Rh2BG038600 Rh2CG039800 Rh2DG039100 Rh5AG053000 Rh5AG053400 Rh5AG054100 Rh5AG054500 Rh5CG060600 Rh5CG061000 |
| rosa_wichuraiana | Rw2G003100 Rw5G005170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 524, 2453, 4637 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 227 |
| AatII | GACGTC | 1 cut(s) | 231 |
| Acc16I | TGCGCA | 1 cut(s) | 3234 |
| Acc36I | ACCTGC | 1 cut(s) | 350 |
| AccB1I | GGYRCC | 2 cut(s) | 599, 5471 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2515 |
| AccBSI | CCGCTC | 3 cut(s) | 1237, 1545, 3505 |
| AccI | GTMKAC | 2 cut(s) | 2790, 4834 |
| AccIII | TCCGGA | 3 cut(s) | 193, 1633, 2340 |
| AciI | CCGC | 9 cut(s) | 140, 203, 613, 1116, 1237, 1264, 1543, 1619, 3505 |
| AclI | AACGTT | 1 cut(s) | 924 |
| AcoI | YGGCCR | 1 cut(s) | 2804 |
| AcsI | RAATTY | 9 cut(s) | 884, 1359, 1441, 1595, 1637, 2592, 2963, 3557, 4691 |
| AcuI | CTGAAG | 6 cut(s) | 1511, 2058, 2159, 3789, 4757, 4993 |
| AcyI | GRCGYC | 2 cut(s) | 228, 2497 |
| AfaI | GTAC | 9 cut(s) | 371, 966, 1154, 1480, 1877, 2652, 2769, 3453, 4079 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 159, 609, 1648, 2464, 2515, 2862, 3008, 5416, 5491 |
| AflII | CTTAAG | 4 cut(s) | 4036, 4348, 4375, 5576 |
| AflIII | ACRYGT | 1 cut(s) | 5386 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 3012, 4930 |
| AjnI | CCWGG | 9 cut(s) | 222, 432, 555, 2365, 2761, 3111, 3852, 3904, 5331 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2141, 2173, 3165, 3197 |
| Alw21I | GWGCWC | 7 cut(s) | 87, 579, 1562, 1921, 2606, 4501, 5021 |
| Alw44I | GTGCAC | 1 cut(s) | 1917 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2515, 2659 |
| Ama87I | CYCGRG | 3 cut(s) | 4442, 5485, 5606 |
| Aor13HI | TCCGGA | 3 cut(s) | 193, 1633, 2340 |
| ApaI | GGGCCC | 1 cut(s) | 53 |
| ApaLI | GTGCAC | 1 cut(s) | 1917 |
| ApoI | RAATTY | 9 cut(s) | 884, 1359, 1441, 1595, 1637, 2592, 2963, 3557, 4691 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1937, 1969 |
| AseI | ATTAAT | 1 cut(s) | 3518 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 688, 3627, 5399 |
| AspLEI | GCGC | 4 cut(s) | 166, 351, 3118, 3235 |
| AsuC2I | CCSGG | 2 cut(s) | 5486, 5487 |
| AsuHPI | GGTGA | 8 cut(s) | 1187, 2812, 3197, 3197, 3521, 4163, 4714, 4816 |
| AsuII | TTCGAA | 1 cut(s) | 1108 |
| AvaI | CYCGRG | 3 cut(s) | 4442, 5485, 5606 |
| AvaII | GGWCC | 1 cut(s) | 3014 |
| BaeGI | GKGCMC | 3 cut(s) | 53, 604, 1921 |
| BamHI | GGATCC | 1 cut(s) | 2758 |
| BanI | GGYRCC | 2 cut(s) | 599, 5471 |
| BanII | GRGCYC | 5 cut(s) | 53, 68, 87, 4501, 5021 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1279, 1311 |
| BauI | CACGAG | 4 cut(s) | 3278, 4200, 4920, 5378 |
| BbsI | GAAGAC | 4 cut(s) | 779, 2165, 4785, 5096 |
| Bbv12I | GWGCWC | 7 cut(s) | 87, 579, 1562, 1921, 2606, 4501, 5021 |
| BceAI | ACGGC | 4 cut(s) | 818, 947, 2098, 4061 |
| BcgI | CGANNNNNNTGC | 5 cut(s) | 35, 80, 114, 3198, 3232 |
| BciT130I | CCWGG | 9 cut(s) | 224, 434, 557, 2367, 2763, 3113, 3854, 3906, 5333 |
| BciVI | GTATCC | 3 cut(s) | 997, 5354, 5443 |
| BclI | TGATCA | 3 cut(s) | 1176, 2098, 4762 |
| BcnI | CCSGG | 2 cut(s) | 5486, 5487 |
| BfaI | CTAG | 9 cut(s) | 587, 594, 630, 1094, 1491, 2711, 2786, 2996, 3068 |
| BfmI | CTRYAG | 3 cut(s) | 1043, 4121, 5060 |
| BfoI | RGCGCY | 1 cut(s) | 3119 |
| BfrI | CTTAAG | 4 cut(s) | 4036, 4348, 4375, 5576 |
| BfuAI | ACCTGC | 1 cut(s) | 350 |
| BfuI | GTATCC | 3 cut(s) | 997, 5354, 5443 |
| BglII | AGATCT | 3 cut(s) | 4379, 5064, 5423 |
| BlpI | GCTNAGC | 2 cut(s) | 4233, 5262 |
| BmcAI | AGTACT | 1 cut(s) | 4079 |
| Bme18I | GGWCC | 1 cut(s) | 3014 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 3012, 4930 |
| BmeT110I | CYCGRG | 3 cut(s) | 4442, 5485, 5606 |
| BmiI | GGNNCC | 6 cut(s) | 51, 601, 1374, 2760, 3325, 5473 |
| BmrI | ACTGGG | 2 cut(s) | 3571, 4936 |
| BmuI | ACTGGG | 2 cut(s) | 3571, 4936 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5487 |
| BpiI | GAAGAC | 4 cut(s) | 779, 2165, 4785, 5096 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 55, 87, 69, 101, 4976, 5008 |
| BpmI | CTGGAG | 7 cut(s) | 1446, 2264, 2388, 3393, 3801, 4151, 4515 |
| Bpu10I | CCTNAGC | 4 cut(s) | 500, 3221, 4500, 5015 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 4233, 5262 |
| Bpu14I | TTCGAA | 1 cut(s) | 1108 |
| BpuEI | CTTGAG | 7 cut(s) | 1889, 2517, 2819, 3692, 4254, 4591, 5561 |
| BpuMI | CCSGG | 2 cut(s) | 5486, 5487 |
| Bsa29I | ATCGAT | 2 cut(s) | 3514, 3763 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2541 |
| BsaHI | GRCGYC | 2 cut(s) | 228, 2497 |
| BsaI | GGTCTC | 2 cut(s) | 368, 2040 |
| BsaJI | CCNNGG | 8 cut(s) | 433, 556, 1482, 1762, 1926, 3904, 5175, 5485 |
| BsaWI | WCCGGW | 3 cut(s) | 193, 1633, 2340 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 95, 125, 4488, 4518 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 159, 609, 1648, 2464, 2515, 2862, 3008, 5416, 5491 |
| Bse118I | RCCGGY | 2 cut(s) | 547, 1316 |
| Bse3DI | GCAATG | 2 cut(s) | 652, 1399 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2541 |
| BseAI | TCCGGA | 3 cut(s) | 193, 1633, 2340 |
| BseBI | CCWGG | 9 cut(s) | 224, 434, 557, 2367, 2763, 3113, 3854, 3906, 5333 |
| BseCI | ATCGAT | 2 cut(s) | 3514, 3763 |
| BseDI | CCNNGG | 8 cut(s) | 433, 556, 1482, 1762, 1926, 3904, 5175, 5485 |
| BseJI | GATNNNNATC | 1 cut(s) | 2541 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 159, 609, 1648, 2464, 2515, 2862, 3008, 5416, 5491 |
| BseMI | GCAATG | 2 cut(s) | 652, 1399 |
| BseRI | GAGGAG | 3 cut(s) | 103, 2231, 3689 |
| BseSI | GKGCMC | 3 cut(s) | 53, 604, 1921 |
| BseYI | CCCAGC | 1 cut(s) | 1907 |
| BshNI | GGYRCC | 2 cut(s) | 599, 5471 |
| BshVI | ATCGAT | 2 cut(s) | 3514, 3763 |
| BsiHKAI | GWGCWC | 7 cut(s) | 87, 579, 1562, 1921, 2606, 4501, 5021 |
| BsiHKCI | CYCGRG | 3 cut(s) | 4442, 5485, 5606 |
| BsiSI | CCGG | 6 cut(s) | 194, 548, 1317, 1634, 2341, 5486 |
| BslFI | GGGAC | 5 cut(s) | 109, 450, 844, 1763, 4091 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 159, 609, 1648, 2464, 2515, 2862, 3008, 5416, 5491 |
| BsmBI | CGTCTC | 2 cut(s) | 75, 4036 |
| BsmFI | GGGAC | 5 cut(s) | 109, 450, 844, 1763, 4091 |
| BsmI | GAATGC | 1 cut(s) | 1248 |
| Bso31I | GGTCTC | 2 cut(s) | 368, 2040 |
| BsoBI | CYCGRG | 3 cut(s) | 4442, 5485, 5606 |
| Bsp119I | TTCGAA | 1 cut(s) | 1108 |
| Bsp120I | GGGCCC | 1 cut(s) | 49 |
| Bsp13I | TCCGGA | 3 cut(s) | 193, 1633, 2340 |
| Bsp1407I | TGTACA | 2 cut(s) | 1152, 2650 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 4233, 5262 |
| Bsp19I | CCATGG | 1 cut(s) | 1926 |
| BspACI | CCGC | 9 cut(s) | 140, 203, 613, 1116, 1237, 1264, 1543, 1619, 3505 |
| BspDI | ATCGAT | 2 cut(s) | 3514, 3763 |
| BspEI | TCCGGA | 3 cut(s) | 193, 1633, 2340 |
| BspHI | TCATGA | 5 cut(s) | 889, 2319, 2616, 2959, 4333 |
| BspLI | GGNNCC | 6 cut(s) | 51, 601, 1374, 2760, 3325, 5473 |
| BspMAI | CTGCAG | 2 cut(s) | 4125, 5064 |
| BspMI | ACCTGC | 1 cut(s) | 350 |
| BspT104I | TTCGAA | 1 cut(s) | 1108 |
| BspT107I | GGYRCC | 2 cut(s) | 599, 5471 |
| BspTI | CTTAAG | 4 cut(s) | 4036, 4348, 4375, 5576 |
| BspTNI | GGTCTC | 2 cut(s) | 368, 2040 |
| BsrBI | CCGCTC | 3 cut(s) | 1237, 1545, 3505 |
| BsrDI | GCAATG | 2 cut(s) | 652, 1399 |
| BsrFI | RCCGGY | 2 cut(s) | 547, 1316 |
| BsrGI | TGTACA | 2 cut(s) | 1152, 2650 |
| BssAI | RCCGGY | 2 cut(s) | 547, 1316 |
| BssECI | CCNNGG | 8 cut(s) | 433, 556, 1482, 1762, 1926, 3904, 5175, 5485 |
| BssNAI | GTATAC | 1 cut(s) | 4835 |
| BssNI | GRCGYC | 2 cut(s) | 228, 2497 |
| BssSI | CACGAG | 4 cut(s) | 3278, 4200, 4920, 5378 |
| BssT1I | CCWWGG | 3 cut(s) | 1482, 1762, 1926 |
| Bst1107I | GTATAC | 1 cut(s) | 4835 |
| Bst2BI | CACGAG | 4 cut(s) | 3278, 4200, 4920, 5378 |
| Bst2UI | CCWGG | 9 cut(s) | 224, 434, 557, 2367, 2763, 3113, 3854, 3906, 5333 |
| Bst6I | CTCTTC | 4 cut(s) | 322, 1907, 3303, 4854 |
| BstACI | GRCGYC | 2 cut(s) | 228, 2497 |
| BstAFI | CTTAAG | 4 cut(s) | 4036, 4348, 4375, 5576 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1667, 4129 |
| BstAUI | TGTACA | 2 cut(s) | 1152, 2650 |
| BstBI | TTCGAA | 1 cut(s) | 1108 |
| BstDSI | CCRYGG | 1 cut(s) | 1926 |
| BstEII | GGTNACC | 1 cut(s) | 1037 |
| BstH2I | RGCGCY | 1 cut(s) | 3119 |
| BstHHI | GCGC | 4 cut(s) | 166, 351, 3118, 3235 |
| BstNI | CCWGG | 9 cut(s) | 224, 434, 557, 2367, 2763, 3113, 3854, 3906, 5333 |
| BstNSI | RCATGY | 9 cut(s) | 1951, 2733, 3182, 3219, 3320, 3870, 3936, 4910, 5390 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5487 |
| BstPI | GGTNACC | 1 cut(s) | 1037 |
| BstSFI | CTRYAG | 3 cut(s) | 1043, 4121, 5060 |
| BstSLI | GKGCMC | 3 cut(s) | 53, 604, 1921 |
| BstV2I | GAAGAC | 4 cut(s) | 779, 2165, 4785, 5096 |
| BstX2I | RGATCY | 9 cut(s) | 385, 1898, 2758, 2998, 3025, 4379, 5064, 5423, 5447 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 5339 |
| BstYI | RGATCY | 9 cut(s) | 385, 1898, 2758, 2998, 3025, 4379, 5064, 5423, 5447 |
| BstZ17I | GTATAC | 1 cut(s) | 4835 |
| Bsu15I | ATCGAT | 2 cut(s) | 3514, 3763 |
| BsuI | GTATCC | 3 cut(s) | 997, 5354, 5443 |
| BsuTUI | ATCGAT | 2 cut(s) | 3514, 3763 |
| BtgI | CCRYGG | 1 cut(s) | 1926 |
| BtgZI | GCGATG | 1 cut(s) | 5330 |
| BtsI | GCAGTG | 2 cut(s) | 2606, 4282 |
| BtsIMutI | CAGTG | 5 cut(s) | 2606, 3002, 3860, 4282, 4614 |
| BveI | ACCTGC | 1 cut(s) | 350 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2515, 2659 |
| CciI | TCATGA | 5 cut(s) | 889, 2319, 2616, 2959, 4333 |
| CfoI | GCGC | 4 cut(s) | 166, 351, 3118, 3235 |
| Cfr10I | RCCGGY | 2 cut(s) | 547, 1316 |
| Cfr9I | CCCGGG | 1 cut(s) | 5485 |
| ClaI | ATCGAT | 2 cut(s) | 3514, 3763 |
| CseI | GACGC | 1 cut(s) | 2486 |
| Csp6I | GTAC | 9 cut(s) | 370, 965, 1153, 1479, 1876, 2651, 2768, 3452, 4078 |
| CviQI | GTAC | 9 cut(s) | 370, 965, 1153, 1479, 1876, 2651, 2768, 3452, 4078 |
| DraI | TTTAAA | 3 cut(s) | 723, 1600, 3379 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 227 |
| DriI | GACNNNNNGTC | 2 cut(s) | 3012, 4930 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 227 |
| EaeI | YGGCCR | 1 cut(s) | 2804 |
| Eam1104I | CTCTTC | 4 cut(s) | 322, 1907, 3303, 4854 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 3012, 4930 |
| EarI | CTCTTC | 4 cut(s) | 322, 1907, 3303, 4854 |
| EciI | GGCGGA | 1 cut(s) | 129 |
| Ecl136II | GAGCTC | 3 cut(s) | 85, 4499, 5019 |
| Eco130I | CCWWGG | 3 cut(s) | 1482, 1762, 1926 |
| Eco24I | GRGCYC | 5 cut(s) | 53, 68, 87, 4501, 5021 |
| Eco31I | GGTCTC | 2 cut(s) | 368, 2040 |
| Eco32I | GATATC | 3 cut(s) | 3729, 3747, 4615 |
| Eco47I | GGWCC | 1 cut(s) | 3014 |
| Eco53kI | GAGCTC | 3 cut(s) | 85, 4499, 5019 |
| Eco57I | CTGAAG | 6 cut(s) | 1511, 2058, 2159, 3789, 4757, 4993 |
| Eco88I | CYCGRG | 3 cut(s) | 4442, 5485, 5606 |
| Eco91I | GGTNACC | 1 cut(s) | 1037 |
| EcoICRI | GAGCTC | 3 cut(s) | 85, 4499, 5019 |
| EcoO65I | GGTNACC | 1 cut(s) | 1037 |
| EcoRI | GAATTC | 2 cut(s) | 1637, 2963 |
| EcoRII | CCWGG | 9 cut(s) | 222, 432, 555, 2365, 2761, 3111, 3852, 3904, 5331 |
| EcoRV | GATATC | 3 cut(s) | 3729, 3747, 4615 |
| EcoT14I | CCWWGG | 3 cut(s) | 1482, 1762, 1926 |
| EcoT22I | ATGCAT | 3 cut(s) | 3872, 4318, 4908 |
| EcoT38I | GRGCYC | 5 cut(s) | 53, 68, 87, 4501, 5021 |
| ErhI | CCWWGG | 3 cut(s) | 1482, 1762, 1926 |
| Esp3I | CGTCTC | 2 cut(s) | 75, 4036 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 174, 206, 435, 467, 940, 972 |
| FaqI | GGGAC | 5 cut(s) | 109, 450, 844, 1763, 4091 |
| FauI | CCCGC | 3 cut(s) | 1230, 1612, 3498 |
| FauNDI | CATATG | 3 cut(s) | 2187, 3696, 4089 |
| FbaI | TGATCA | 3 cut(s) | 1176, 2098, 4762 |
| FblI | GTMKAC | 2 cut(s) | 2790, 4834 |
| FriOI | GRGCYC | 5 cut(s) | 53, 68, 87, 4501, 5021 |
| FspBI | CTAG | 9 cut(s) | 587, 594, 630, 1094, 1491, 2711, 2786, 2996, 3068 |
| FspI | TGCGCA | 1 cut(s) | 3234 |
| GlaI | GCGC | 4 cut(s) | 165, 350, 3117, 3234 |
| GsaI | CCCAGC | 1 cut(s) | 1911 |
| GsuI | CTGGAG | 7 cut(s) | 1446, 2264, 2388, 3393, 3801, 4151, 4515 |
| HaeII | RGCGCY | 1 cut(s) | 3119 |
| HapII | CCGG | 6 cut(s) | 194, 548, 1317, 1634, 2341, 5486 |
| HgaI | GACGC | 1 cut(s) | 2486 |
| HhaI | GCGC | 4 cut(s) | 166, 351, 3118, 3235 |
| Hin1I | GRCGYC | 2 cut(s) | 228, 2497 |
| Hin6I | GCGC | 4 cut(s) | 164, 349, 3116, 3233 |
| HinP1I | GCGC | 4 cut(s) | 164, 349, 3116, 3233 |
| HincII | GTYRAC | 4 cut(s) | 3702, 4085, 4113, 4555 |
| HindII | GTYRAC | 4 cut(s) | 3702, 4085, 4113, 4555 |
| HindIII | AAGCTT | 3 cut(s) | 2927, 3995, 4567 |
| HpaI | GTTAAC | 1 cut(s) | 3702 |
| HpaII | CCGG | 6 cut(s) | 194, 548, 1317, 1634, 2341, 5486 |
| HphI | GGTGA | 8 cut(s) | 1187, 2812, 3197, 3197, 3521, 4163, 4714, 4816 |
| Hpy99I | CGWCG | 4 cut(s) | 58, 257, 2231, 3452 |
| HpyCH4IV | ACGT | 8 cut(s) | 228, 769, 924, 2229, 3450, 3600, 4001, 5073 |
| HpySE526I | ACGT | 8 cut(s) | 228, 769, 924, 2229, 3450, 3600, 4001, 5073 |
| Hsp92I | GRCGYC | 2 cut(s) | 228, 2497 |
| HspAI | GCGC | 4 cut(s) | 164, 349, 3116, 3233 |
| Kpn2I | TCCGGA | 3 cut(s) | 193, 1633, 2340 |
| Ksp22I | TGATCA | 3 cut(s) | 1176, 2098, 4762 |
| KspAI | GTTAAC | 1 cut(s) | 3702 |
| MaeI | CTAG | 9 cut(s) | 587, 594, 630, 1094, 1491, 2711, 2786, 2996, 3068 |
| MaeII | ACGT | 8 cut(s) | 228, 769, 924, 2229, 3450, 3600, 4001, 5073 |
| MbiI | CCGCTC | 3 cut(s) | 1237, 1545, 3505 |
| MfeI | CAATTG | 1 cut(s) | 3075 |
| MflI | RGATCY | 9 cut(s) | 385, 1898, 2758, 2998, 3025, 4379, 5064, 5423, 5447 |
| MlyI | GAGTC | 3 cut(s) | 1444, 2379, 4940 |
| MmeI | TCCRAC | 4 cut(s) | 889, 1876, 3333, 5549 |
| Mph1103I | ATGCAT | 3 cut(s) | 3872, 4318, 4908 |
| MroI | TCCGGA | 3 cut(s) | 193, 1633, 2340 |
| MroXI | GAANNNNTTC | 3 cut(s) | 688, 3627, 5399 |
| MslI | CAYNNNNRTG | 5 cut(s) | 267, 3183, 3865, 4416, 4482 |
| MspA1I | CMGCKG | 1 cut(s) | 19 |
| MspCI | CTTAAG | 4 cut(s) | 4036, 4348, 4375, 5576 |
| MspI | CCGG | 6 cut(s) | 194, 548, 1317, 1634, 2341, 5486 |
| MunI | CAATTG | 1 cut(s) | 3075 |
| Mva1269I | GAATGC | 1 cut(s) | 1248 |
| MvaI | CCWGG | 9 cut(s) | 224, 434, 557, 2367, 2763, 3113, 3854, 3906, 5333 |
| NciI | CCSGG | 2 cut(s) | 5486, 5487 |
| NcoI | CCATGG | 1 cut(s) | 1926 |
| NdeI | CATATG | 3 cut(s) | 2187, 3696, 4089 |
| NlaIV | GGNNCC | 6 cut(s) | 51, 601, 1374, 2760, 3325, 5473 |
| NmuCI | GTSAC | 8 cut(s) | 3539, 3596, 3977, 4475, 4922, 5038, 5149, 5596 |
| NsbI | TGCGCA | 1 cut(s) | 3234 |
| NsiI | ATGCAT | 3 cut(s) | 3872, 4318, 4908 |
| NspI | RCATGY | 9 cut(s) | 1951, 2733, 3182, 3219, 3320, 3870, 3936, 4910, 5390 |
| NspV | TTCGAA | 1 cut(s) | 1108 |
| PaeI | GCATGC | 3 cut(s) | 2733, 3219, 4910 |
| PaeR7I | CTCGAG | 2 cut(s) | 4442, 5606 |
| PagI | TCATGA | 5 cut(s) | 889, 2319, 2616, 2959, 4333 |
| PciI | ACATGT | 1 cut(s) | 5386 |
| PctI | GAATGC | 1 cut(s) | 1248 |
| PdmI | GAANNNNTTC | 3 cut(s) | 688, 3627, 5399 |
| PfeI | GAWTC | 9 cut(s) | 35, 590, 1226, 2070, 3400, 4022, 5203, 5521, 5620 |
| PflFI | GACNNNGTC | 2 cut(s) | 1214, 2231 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2515 |
| PleI | GAGTC | 3 cut(s) | 1444, 2378, 4939 |
| PpsI | GAGTC | 3 cut(s) | 1444, 2378, 4939 |
| PscI | ACATGT | 1 cut(s) | 5386 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5487 |
| PshBI | ATTAAT | 1 cut(s) | 3518 |
| PsiI | TTATAA | 3 cut(s) | 524, 2453, 4637 |
| Psp124BI | GAGCTC | 3 cut(s) | 87, 4501, 5021 |
| Psp1406I | AACGTT | 1 cut(s) | 924 |
| Psp6I | CCWGG | 9 cut(s) | 222, 432, 555, 2365, 2761, 3111, 3852, 3904, 5331 |
| PspEI | GGTNACC | 1 cut(s) | 1037 |
| PspFI | CCCAGC | 1 cut(s) | 1907 |
| PspGI | CCWGG | 9 cut(s) | 222, 432, 555, 2365, 2761, 3111, 3852, 3904, 5331 |
| PspN4I | GGNNCC | 6 cut(s) | 51, 601, 1374, 2760, 3325, 5473 |
| PspOMI | GGGCCC | 1 cut(s) | 49 |
| PspXI | VCTCGAGB | 1 cut(s) | 5606 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 2614, 2646, 4443, 4475 |
| PstI | CTGCAG | 2 cut(s) | 4125, 5064 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2515, 2659 |
| PsuI | RGATCY | 9 cut(s) | 385, 1898, 2758, 2998, 3025, 4379, 5064, 5423, 5447 |
| PsyI | GACNNNGTC | 2 cut(s) | 1214, 2231 |
| PvuII | CAGCTG | 1 cut(s) | 19 |
| RsaI | GTAC | 9 cut(s) | 371, 966, 1154, 1480, 1877, 2652, 2769, 3453, 4079 |
| RsaNI | GTAC | 9 cut(s) | 370, 965, 1153, 1479, 1876, 2651, 2768, 3452, 4078 |
| RseI | CAYNNNNRTG | 5 cut(s) | 267, 3183, 3865, 4416, 4482 |
| SacI | GAGCTC | 3 cut(s) | 87, 4501, 5021 |
| ScaI | AGTACT | 1 cut(s) | 4079 |
| SchI | GAGTC | 3 cut(s) | 1444, 2379, 4940 |
| SfcI | CTRYAG | 3 cut(s) | 1043, 4121, 5060 |
| Sfr274I | CTCGAG | 2 cut(s) | 4442, 5606 |
| SfuI | TTCGAA | 1 cut(s) | 1108 |
| SinI | GGWCC | 1 cut(s) | 3014 |
| SlaI | CTCGAG | 2 cut(s) | 4442, 5606 |
| SmaI | CCCGGG | 1 cut(s) | 5487 |
| SmiI | ATTTAAAT | 1 cut(s) | 3379 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 267, 3183, 3865, 4416, 4482 |
| SphI | GCATGC | 3 cut(s) | 2733, 3219, 4910 |
| SsiI | CCGC | 9 cut(s) | 140, 203, 613, 1116, 1237, 1264, 1543, 1619, 3505 |
| SspI | AATATT | 1 cut(s) | 5293 |
| SspMI | CTAG | 9 cut(s) | 587, 594, 630, 1094, 1491, 2711, 2786, 2996, 3068 |
| SstI | GAGCTC | 3 cut(s) | 87, 4501, 5021 |
| StyI | CCWWGG | 3 cut(s) | 1482, 1762, 1926 |
| SwaI | ATTTAAAT | 1 cut(s) | 3379 |
| TaiI | ACGT | 8 cut(s) | 231, 772, 927, 2232, 3453, 3603, 4004, 5076 |
| TatI | WGTACW | 4 cut(s) | 1152, 2650, 2767, 4077 |
| TauI | GCSGC | 3 cut(s) | 205, 616, 1118 |
| TfiI | GAWTC | 9 cut(s) | 35, 590, 1226, 2070, 3400, 4022, 5203, 5521, 5620 |
| TscAI | CASTG | 5 cut(s) | 2606, 3009, 3867, 4282, 4614 |
| TseFI | GTSAC | 8 cut(s) | 3539, 3596, 3977, 4475, 4922, 5038, 5149, 5596 |
| Tsp45I | GTSAC | 8 cut(s) | 3539, 3596, 3977, 4475, 4922, 5038, 5149, 5596 |
| TspGWI | ACGGA | 5 cut(s) | 2407, 2878, 3115, 3527, 4951 |
| TspMI | CCCGGG | 1 cut(s) | 5485 |
| TspRI | CASTG | 5 cut(s) | 2606, 3009, 3867, 4282, 4614 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1214, 2231 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2515 |
| Vha464I | CTTAAG | 4 cut(s) | 4036, 4348, 4375, 5576 |
| VneI | GTGCAC | 1 cut(s) | 1917 |
| VpaK11BI | GGWCC | 1 cut(s) | 3014 |
| VspI | ATTAAT | 1 cut(s) | 3518 |
| XapI | RAATTY | 9 cut(s) | 884, 1359, 1441, 1595, 1637, 2592, 2963, 3557, 4691 |
| XbaI | TCTAGA | 2 cut(s) | 586, 593 |
| XceI | RCATGY | 9 cut(s) | 1951, 2733, 3182, 3219, 3320, 3870, 3936, 4910, 5390 |
| XhoI | CTCGAG | 2 cut(s) | 4442, 5606 |
| XmaI | CCCGGG | 1 cut(s) | 5485 |
| XmiI | GTMKAC | 2 cut(s) | 2790, 4834 |
| XmnI | GAANNNNTTC | 3 cut(s) | 688, 3627, 5399 |
| XspI | CTAG | 9 cut(s) | 587, 594, 630, 1094, 1491, 2711, 2786, 2996, 3068 |
| ZraI | GACGTC | 1 cut(s) | 229 |
| ZrmI | AGTACT | 1 cut(s) | 4079 |
| Zsp2I | ATGCAT | 3 cut(s) | 3872, 4318, 4908 |