Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0002950

Physical Location & Seq

Genomic Coordinates Forward (+)

4165850 .. 4169192

Gene Structure 3343 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g07870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGAACTCTCAAACAAACATGTTTTCTTAACAAAAGCCGAACGTGAGCAGCTAGCCCTACAAACCCACCAACATGAAAATCTCTTCCATTCTCGTCCTTCCTCCGATGATGCAGGCCAAAAAACAACAGACCGTGAATCATCCGAGAGGCAGAGACGCCGTGACTGCGACCACCTTAAGAGAAAACGTGAAGAGGGAGCTAGGGCAAGCCGCTTAGAGAAGGAGCTTGAAGCCATTAAAGAACAGTATCTAGGTTCCAACAAGCCTAAAAAACGTGTCATTAAACCTAGCGAGAAGTTCCGGTTCTCTTTCGATTGGGACACCACAGAAGACACTTCTCGTGACATGAACCCCTTGTACCAAAACCCTCACGAGGCCCATCTCTTGTTTGGGCGAGGGCTTCGCGCCGGTATGGACCGGCGTGAGCAGAAGATGCAGGCTGCCAAGCAAGAGAGGGAGATTCGGAACAAGGAGTGCCGTGTGGAAGAGGAAGTAGTGTATGATTCTTTTGACATGAAGGTGGATCGACATTGGAGTGATAAGAAGCTTGGGGAGATGAATGAGAGGGATTGGAGGATTTTCCGAGAGGATTTCAATATTTCATACAAAGGGTCCAAGATTCCTAGACCTATTAGGAAATGGGATGAGAGTAAATTGAGTGCGGAGTTGCTCAAGGCTGTGAATAGGGCTGGTTATAAGAAACCGTCTCCCATTCAGATGGCAGCAATCCCTCTCGGTTTACAACAGCGTGATGTTATTGGCATTGCCGAGACTGGTTCCGGCAAGACTGCTGCCTTTGTTCTTCCTATGTTAAGTTATATATCTAGGTTGCCTCCTATTAGTGAAGATAATGAGGCTGAAGGGCCTTATGCTGTGGTCTTGGCACCTACTCGCGAGCTTGCGCAGCAGATTGAGAAAGAGACTGTCAAGCTTGCGCATTACTTGGGAATCAAGGTTGTTTCTATTGTTGGTGGGAAGTCAATTGAGGAACAGGGTTTTAGAATCGCGCAAGGGTGTGAGGTTGTCATTGCCACGCCAGGGCGTATGATTGATTGTTTGCAGAGGCGTCTTGCTGTTTTGAATCAGTGCAACTATGTGGTTCTTGACGAGGCTGATACGATGATAGATAAAGGATTTGAGGACCAGGTTGTTGGTGTCTTGGATGCAATGCCTTCGAGCAACTTGAAACCCGAGAATGAGGATGAAGAGCTAGATGAGAAGAGGATTTACAGAACCACTTATATGTTCAGCGCAACTATGCCTCCTGCCGTGGAGCGACTCGCCCGTAATTACTTGAGGAATCCTGTTGTGGTTACTATTGGCACTGCCGGAACCACCACTGATTTGATCACTCAGAATGTGGTCATGATCAGCAAGGAATCCGAGAAGTTTGAAAAGTTGAAAAAATTGCTTGATGAAGTACTTGGTGATCATAAGAATGCTATTGTATTTGCCAACACCAAGAAAAATGTTAGTAGTCTAGCCAAGAATTTGAGCAAGAATGGATATCATCATGTGATCACTTTGCATTCGGATTTATCACAACCACAGAGAGACTCTAACCTTGAAGGTTTTAGGACCAAGAGATACAATGTCCTTATTGCGACAGATGCTGCAGGACGAGGTATTGATGTGCCGGATGTGTCACATGTAATAAACTATGAAATGCCGTCAAAGATAGAAACGTACACTCATCGAATTGGACGTACTGGTCGTGCAGGGAAGAGTGGTTTAGCCACAACATTCTTGACAATGCAAGACACTGGGGTGTTCTATGATCTCAAGAAGATGCTCATTCAGAGCAACAGTCCTGTTCCTTCTGAGCTAGCGAGACACGAAGCCTCAAAGTATAAGCCTGGCACATTTCGTGACAGACCGCCGAGGCGTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

631

Amino Acids

71.86

Weight (kDa)

9.02

Isoelectric Point (pI)

45.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DDX23	PF25430	102 - 195	1.8e-21	DDX23-like domain
DEAD	PF00270	236 - 426	8.9e-45	DEAD/DEAH box helicase
Helicase_C	PF00271	463 - 574	2.8e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28180 AT1G28180 AT2G33730
fragaria_vesca	FvH4_1g07870 FvH4_2g13750
malus_domestica	MD05G1025300.v1.1 MD10G1025500.v1.1
prunus_persica	Prupe.8G029000_v2.0.a1 Prupe.8G029000_v2.0.a1
pyrus_communis	pycom05g01650 pycom10g01680
rosa_chinensis	RchiOBHm_Chr1g0333041 RchiOBHm_Chr2g0093751 RchiOBHm_Chr2g0093761 RchiOBHm_Chr6g0275441
rosa_laevigata	RLG00000013755 RLG00000016434
rosa_multiflora	Rmu_sc0004143.1_g000018 Rmu_sc0021925.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237200 Rroxscaffold_7G00193300
rosa_rugosa	Rorug02G0039500 Rorug06G0092300 Rorug06G0092400 Rorug07G0206900
rosa_samantha	Rh1AG129900 Rh1CG123700 Rh1DG135400 Rh2BG086300 Rh2CG088700 Rh2DG084300 Rh2DG084400 Rh6AG205700 Rh6CG210900 Rh6DG201100 Rh7BG338800
rosa_wichuraiana	Rw1G010290 Rw6G017840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	696
AasI	GACNNNNNNGTC	1 cut(s)	1710
Acc16I	TGCGCA	2 cut(s)	903, 936
AccB1I	GGYRCC	1 cut(s)	883
AccII	CGCG	3 cut(s)	405, 894, 1007
AciI	CCGC	3 cut(s)	211, 662, 1877
AclWI	GGATC	1 cut(s)	531
AcsI	RAATTY	1 cut(s)	1489
AcuI	CTGAAG	1 cut(s)	879
AcyI	GRCGYC	2 cut(s)	157, 1066
AfaI	GTAC	4 cut(s)	359, 1422, 1688, 1708
AfiI	CCNNNNNNNGG	2 cut(s)	373, 1038
AflII	CTTAAG	1 cut(s)	176
AflIII	ACRYGT	3 cut(s)	19, 274, 1648
AgsI	TTSAA	7 cut(s)	230, 595, 1081, 1186, 1394, 1402, 1568
AjnI	CCWGG	3 cut(s)	1036, 1143, 1855
AleI	CACNNNNGTG	1 cut(s)	1766
AluBI	AGCT	8 cut(s)	52, 200, 226, 547, 898, 931, 1210, 1825
AluI	AGCT	8 cut(s)	52, 200, 226, 547, 898, 931, 1210, 1825
Alw26I	GTCTC	6 cut(s)	148, 711, 764, 914, 1548, 1825
AlwI	GGATC	1 cut(s)	531
AlwNI	CAGNNNCTG	1 cut(s)	1613
Ama87I	CYCGRG	1 cut(s)	1190
AoxI	GGCC	3 cut(s)	115, 375, 863
ApeKI	GCWGC	6 cut(s)	49, 440, 722, 791, 904, 1613
ApoI	RAATTY	1 cut(s)	1489
AspLEI	GCGC	5 cut(s)	407, 904, 937, 1009, 1253
AspS9I	GGNCC	6 cut(s)	376, 415, 612, 863, 1141, 1578
AsuHPI	GGTGA	1 cut(s)	1439
AsuNHI	GCTAGC	2 cut(s)	52, 1825
AvaI	CYCGRG	1 cut(s)	1190
AvaII	GGWCC	4 cut(s)	415, 612, 1141, 1578
BanI	GGYRCC	1 cut(s)	883
BarI	GAAGNNNNNNTAC	2 cut(s)	1211, 1243
BauI	CACGAG	2 cut(s)	339, 371
BbsI	GAAGAC	1 cut(s)	336
BbvI	GCAGC	6 cut(s)	61, 427, 734, 778, 916, 1600
BccI	CCATC	2 cut(s)	387, 712
BceAI	ACGGC	4 cut(s)	144, 462, 1253, 1654
BcgI	CGANNNNNNTGC	2 cut(s)	1155, 1189
BciT130I	CCWGG	3 cut(s)	1038, 1145, 1857
BclI	TGATCA	4 cut(s)	1347, 1368, 1429, 1518
BcoDI	GTCTC	6 cut(s)	148, 711, 764, 914, 1548, 1825
BfmI	CTRYAG	1 cut(s)	1614
BfrI	CTTAAG	1 cut(s)	176
BisI	GCNGC	7 cut(s)	50, 211, 441, 723, 792, 905, 1614
BlsI	GCNGC	7 cut(s)	51, 212, 442, 724, 793, 906, 1615
BmcAI	AGTACT	1 cut(s)	1422
Bme1390I	CCNGG	3 cut(s)	1038, 1145, 1857
Bme18I	GGWCC	4 cut(s)	415, 612, 1141, 1578
BmeT110I	CYCGRG	1 cut(s)	1190
BmgT120I	GGNCC	6 cut(s)	376, 415, 612, 863, 1141, 1578
BmiI	GGNNCC	5 cut(s)	256, 613, 778, 885, 1333
BmrFI	CCNGG	3 cut(s)	1038, 1145, 1857
BmrI	ACTGGG	1 cut(s)	1773
BmsI	GCATC	5 cut(s)	100, 423, 1153, 1600, 1779
BmtI	GCTAGC	2 cut(s)	56, 1829
BmuI	ACTGGG	1 cut(s)	1773
BpiI	GAAGAC	1 cut(s)	336
BpuEI	CTTGAG	3 cut(s)	656, 1315, 1766
BsaHI	GRCGYC	2 cut(s)	157, 1066
BsaJI	CCNNGG	3 cut(s)	1037, 1269, 1880
BsaWI	WCCGGW	1 cut(s)	300
BsaXI	ACNNNNNCTCC	2 cut(s)	1246, 1276
Bsc4I	CCNNNNNNNGG	2 cut(s)	373, 1038
Bse118I	RCCGGY	2 cut(s)	407, 417
Bse1I	ACTGG	3 cut(s)	778, 1714, 1768
Bse3DI	GCAATG	3 cut(s)	762, 1026, 1173
BseBI	CCWGG	3 cut(s)	1038, 1145, 1857
BseDI	CCNNGG	3 cut(s)	1037, 1269, 1880
BseGI	GGATG	5 cut(s)	140, 649, 1168, 1207, 1645
BseLI	CCNNNNNNNGG	2 cut(s)	373, 1038
BseMI	GCAATG	3 cut(s)	762, 1026, 1173
BseMII	CTCAG	2 cut(s)	1367, 1812
BseNI	ACTGG	3 cut(s)	778, 1714, 1768
BseXI	GCAGC	6 cut(s)	61, 427, 734, 778, 916, 1600
BsgI	GTGCAG	1 cut(s)	1737
Bsh1236I	CGCG	3 cut(s)	405, 894, 1007
BshFI	GGCC	3 cut(s)	117, 377, 865
BshNI	GGYRCC	1 cut(s)	883
BsiHKCI	CYCGRG	1 cut(s)	1190
BsiSI	CCGG	6 cut(s)	301, 408, 418, 780, 1329, 1637
BslFI	GGGAC	1 cut(s)	332
BslI	CCNNNNNNNGG	2 cut(s)	373, 1038
BsmAI	GTCTC	6 cut(s)	148, 711, 764, 914, 1548, 1825
BsmBI	CGTCTC	2 cut(s)	148, 711
BsmFI	GGGAC	1 cut(s)	332
BsmI	GAATGC	2 cut(s)	1444, 1528
BsnI	GGCC	3 cut(s)	117, 377, 865
BsoBI	CYCGRG	1 cut(s)	1190
Bsp143I	GATC	6 cut(s)	523, 1347, 1368, 1429, 1518, 1777
Bsp68I	TCGCGA	1 cut(s)	894
BspACI	CCGC	3 cut(s)	211, 662, 1877
BspANI	GGCC	3 cut(s)	117, 377, 865
BspCNI	CTCAG	2 cut(s)	1366, 1813
BspFNI	CGCG	3 cut(s)	405, 894, 1007
BspHI	TCATGA	1 cut(s)	1365
BspLI	GGNNCC	5 cut(s)	256, 613, 778, 885, 1333
BspMAI	CTGCAG	1 cut(s)	1618
BspOI	GCTAGC	2 cut(s)	56, 1829
BspPI	GGATC	1 cut(s)	531
BspQI	GCTCTTC	1 cut(s)	1200
BspT107I	GGYRCC	1 cut(s)	883
BspTI	CTTAAG	1 cut(s)	176
BsrDI	GCAATG	3 cut(s)	762, 1026, 1173
BsrFI	RCCGGY	2 cut(s)	407, 417
BsrI	ACTGG	3 cut(s)	778, 1714, 1768
BssAI	RCCGGY	2 cut(s)	407, 417
BssECI	CCNNGG	3 cut(s)	1037, 1269, 1880
BssMI	GATC	6 cut(s)	523, 1347, 1368, 1429, 1518, 1777
BssNI	GRCGYC	2 cut(s)	157, 1066
BssSI	CACGAG	2 cut(s)	339, 371
Bst2BI	CACGAG	2 cut(s)	339, 371
Bst2UI	CCWGG	3 cut(s)	1038, 1145, 1857
Bst4CI	ACNGT	5 cut(s)	134, 246, 705, 925, 1808
Bst6I	CTCTTC	6 cut(s)	89, 186, 480, 1200, 1214, 1718
BstACI	GRCGYC	2 cut(s)	157, 1066
BstAFI	CTTAAG	1 cut(s)	176
BstAPI	GCANNNNNTGC	1 cut(s)	433
BstC8I	GCNNGC	8 cut(s)	54, 115, 208, 438, 896, 900, 933, 1827
BstDEI	CTNAG	3 cut(s)	214, 1353, 1821
BstDSI	CCRYGG	1 cut(s)	1269
BstF5I	GGATG	5 cut(s)	140, 649, 1168, 1207, 1645
BstFNI	CGCG	3 cut(s)	405, 894, 1007
BstHHI	GCGC	5 cut(s)	407, 904, 937, 1009, 1253
BstKTI	GATC	6 cut(s)	526, 1350, 1371, 1432, 1521, 1780
BstMAI	GTCTC	6 cut(s)	148, 711, 764, 914, 1548, 1825
BstMBI	GATC	6 cut(s)	523, 1347, 1368, 1429, 1518, 1777
BstMWI	GCNNNNNNNGC	4 cut(s)	165, 433, 904, 1610
BstNI	CCWGG	3 cut(s)	1038, 1145, 1857
BstNSI	RCATGY	2 cut(s)	23, 1652
BstSCI	CCNGG	3 cut(s)	1036, 1143, 1855
BstSFI	CTRYAG	1 cut(s)	1614
BstUI	CGCG	3 cut(s)	405, 894, 1007
BstV1I	GCAGC	6 cut(s)	61, 427, 734, 778, 916, 1600
BstV2I	GAAGAC	1 cut(s)	336
BstXI	CCANNNNNNTGG	2 cut(s)	718, 1151
BsuRI	GGCC	3 cut(s)	117, 377, 865
BtgI	CCRYGG	1 cut(s)	1269
BtsCI	GGATG	5 cut(s)	140, 649, 1168, 1207, 1645
BtsI	GCAGTG	1 cut(s)	1323
BtsIMutI	CAGTG	4 cut(s)	1091, 1323, 1338, 1761
BtuMI	TCGCGA	1 cut(s)	894
Cac8I	GCNNGC	8 cut(s)	54, 115, 208, 438, 896, 900, 933, 1827
CaiI	CAGNNNCTG	1 cut(s)	1613
CciI	TCATGA	1 cut(s)	1365
CfoI	GCGC	5 cut(s)	407, 904, 937, 1009, 1253
Cfr10I	RCCGGY	2 cut(s)	407, 417
Cfr13I	GGNCC	6 cut(s)	376, 415, 612, 863, 1141, 1578
CseI	GACGC	2 cut(s)	165, 1055
CsiI	ACCWGGT	1 cut(s)	1143
Csp6I	GTAC	4 cut(s)	358, 1421, 1687, 1707
CviAII	CATG	7 cut(s)	20, 74, 346, 514, 1366, 1514, 1649
CviQI	GTAC	4 cut(s)	358, 1421, 1687, 1707
DdeI	CTNAG	3 cut(s)	214, 1353, 1821
DpnI	GATC	6 cut(s)	525, 1349, 1370, 1431, 1520, 1779
DpnII	GATC	6 cut(s)	523, 1347, 1368, 1429, 1518, 1777
DrdI	GACNNNNNNGTC	1 cut(s)	1710
DseDI	GACNNNNNNGTC	1 cut(s)	1710
Eam1104I	CTCTTC	6 cut(s)	89, 186, 480, 1200, 1214, 1718
EarI	CTCTTC	6 cut(s)	89, 186, 480, 1200, 1214, 1718
Eco32I	GATATC	1 cut(s)	1508
Eco47I	GGWCC	4 cut(s)	415, 612, 1141, 1578
Eco57I	CTGAAG	1 cut(s)	879
Eco88I	CYCGRG	1 cut(s)	1190
EcoO109I	RGGNCCY	1 cut(s)	863
EcoRII	CCWGG	3 cut(s)	1036, 1143, 1855
EcoRV	GATATC	1 cut(s)	1508
Esp3I	CGTCTC	2 cut(s)	148, 711
FaeI	CATG	7 cut(s)	23, 77, 349, 517, 1369, 1517, 1652
FaqI	GGGAC	1 cut(s)	332
FatI	CATG	7 cut(s)	19, 73, 345, 513, 1365, 1513, 1648
FbaI	TGATCA	4 cut(s)	1347, 1368, 1429, 1518
Fnu4HI	GCNGC	7 cut(s)	50, 211, 441, 723, 792, 905, 1614
FokI	GGATG	5 cut(s)	127, 656, 1175, 1214, 1652
Fsp4HI	GCNGC	7 cut(s)	50, 211, 441, 723, 792, 905, 1614
FspI	TGCGCA	2 cut(s)	903, 936
GlaI	GCGC	5 cut(s)	406, 903, 936, 1008, 1252
GluI	GCNGC	7 cut(s)	50, 211, 441, 723, 792, 905, 1614
HaeIII	GGCC	3 cut(s)	117, 377, 865
HapII	CCGG	6 cut(s)	301, 408, 418, 780, 1329, 1637
HgaI	GACGC	2 cut(s)	165, 1055
HhaI	GCGC	5 cut(s)	407, 904, 937, 1009, 1253
Hin1I	GRCGYC	2 cut(s)	157, 1066
Hin1II	CATG	7 cut(s)	23, 77, 349, 517, 1369, 1517, 1652
Hin6I	GCGC	5 cut(s)	405, 902, 935, 1007, 1251
HinP1I	GCGC	5 cut(s)	405, 902, 935, 1007, 1251
HindIII	AAGCTT	2 cut(s)	545, 929
HpaII	CCGG	6 cut(s)	301, 408, 418, 780, 1329, 1637
HphI	GGTGA	1 cut(s)	1439
Hpy166II	GTNNAC	2 cut(s)	740, 1689
Hpy188III	TCNNGA	8 cut(s)	341, 371, 893, 1103, 1366, 1747, 1783, 1868
Hpy8I	GTNNAC	2 cut(s)	740, 1689
HpyAV	CCTTC	7 cut(s)	108, 214, 511, 854, 1182, 1562, 1827
HpyCH4III	ACNGT	5 cut(s)	134, 246, 705, 925, 1808
HpyCH4IV	ACGT	5 cut(s)	43, 187, 274, 1685, 1705
HpyCH4V	TGCA	9 cut(s)	113, 436, 1060, 1089, 1166, 1528, 1616, 1718, 1756
HpyF10VI	GCNNNNNNNGC	4 cut(s)	165, 433, 904, 1610
HpyF3I	CTNAG	3 cut(s)	214, 1353, 1821
HpySE526I	ACGT	5 cut(s)	43, 187, 274, 1685, 1705
Hsp92I	GRCGYC	2 cut(s)	157, 1066
Hsp92II	CATG	7 cut(s)	23, 77, 349, 517, 1369, 1517, 1652
HspAI	GCGC	5 cut(s)	405, 902, 935, 1007, 1251
Ksp22I	TGATCA	4 cut(s)	1347, 1368, 1429, 1518
Kzo9I	GATC	6 cut(s)	523, 1347, 1368, 1429, 1518, 1777
LguI	GCTCTTC	1 cut(s)	1200
LmnI	GCTCC	3 cut(s)	197, 223, 1273
Lsp1109I	GCAGC	6 cut(s)	61, 427, 734, 778, 916, 1600
LweI	GCATC	5 cut(s)	100, 423, 1153, 1600, 1779
MabI	ACCWGGT	1 cut(s)	1143
MaeII	ACGT	5 cut(s)	43, 187, 274, 1685, 1705
MaeIII	GTNAC	6 cut(s)	161, 341, 1312, 1644, 1868, 1886
MalI	GATC	6 cut(s)	525, 1349, 1370, 1431, 1520, 1779
MboI	GATC	6 cut(s)	523, 1347, 1368, 1429, 1518, 1777
MfeI	CAATTG	1 cut(s)	981
MluCI	AATT	6 cut(s)	653, 981, 1288, 1406, 1489, 1698
MlyI	GAGTC	2 cut(s)	1272, 1550
MmeI	TCCRAC	1 cut(s)	282
MseI	TTAA	5 cut(s)	29, 177, 237, 282, 812
MslI	CAYNNNNRTG	7 cut(s)	72, 518, 534, 716, 1241, 1437, 1766
MspCI	CTTAAG	1 cut(s)	176
MspI	CCGG	6 cut(s)	301, 408, 418, 780, 1329, 1637
MspR9I	CCNGG	3 cut(s)	1038, 1145, 1857
MunI	CAATTG	1 cut(s)	981
Mva1269I	GAATGC	2 cut(s)	1444, 1528
MvaI	CCWGG	3 cut(s)	1038, 1145, 1857
MvnI	CGCG	3 cut(s)	405, 894, 1007
MwoI	GCNNNNNNNGC	4 cut(s)	165, 433, 904, 1610
NdeII	GATC	6 cut(s)	523, 1347, 1368, 1429, 1518, 1777
NheI	GCTAGC	2 cut(s)	52, 1825
NlaIII	CATG	7 cut(s)	23, 77, 349, 517, 1369, 1517, 1652
NlaIV	GGNNCC	5 cut(s)	256, 613, 778, 885, 1333
NmeAIII	GCCGAG	1 cut(s)	793
NmuCI	GTSAC	4 cut(s)	161, 341, 1644, 1868
NruI	TCGCGA	1 cut(s)	894
NsbI	TGCGCA	2 cut(s)	903, 936
NspI	RCATGY	2 cut(s)	23, 1652
OliI	CACNNNNGTG	1 cut(s)	1766
PagI	TCATGA	1 cut(s)	1365
PciI	ACATGT	2 cut(s)	19, 1648
PciSI	GCTCTTC	1 cut(s)	1200
PcsI	WCGNNNNNNNCGW	2 cut(s)	1702, 1711
PctI	GAATGC	2 cut(s)	1444, 1528
PfeI	GAWTC	9 cut(s)	137, 460, 503, 619, 948, 1002, 1081, 1300, 1379
PkrI	GCNGC	7 cut(s)	51, 212, 442, 724, 793, 906, 1615
PleI	GAGTC	2 cut(s)	1272, 1550
PpsI	GAGTC	2 cut(s)	1272, 1550
PscI	ACATGT	2 cut(s)	19, 1648
PsiI	TTATAA	1 cut(s)	696
Psp6I	CCWGG	3 cut(s)	1036, 1143, 1855
PspGI	CCWGG	3 cut(s)	1036, 1143, 1855
PspN4I	GGNNCC	5 cut(s)	256, 613, 778, 885, 1333
PspPI	GGNCC	6 cut(s)	376, 415, 612, 863, 1141, 1578
PsrI	GAACNNNNNNTAC	2 cut(s)	341, 373
PstI	CTGCAG	1 cut(s)	1618
PstNI	CAGNNNCTG	1 cut(s)	1613
RruI	TCGCGA	1 cut(s)	894
RsaI	GTAC	4 cut(s)	359, 1422, 1688, 1708
RsaNI	GTAC	4 cut(s)	358, 1421, 1687, 1707
RseI	CAYNNNNRTG	7 cut(s)	72, 518, 534, 716, 1241, 1437, 1766
SapI	GCTCTTC	1 cut(s)	1200
SaqAI	TTAA	5 cut(s)	29, 177, 237, 282, 812
SatI	GCNGC	7 cut(s)	50, 211, 441, 723, 792, 905, 1614
Sau3AI	GATC	6 cut(s)	523, 1347, 1368, 1429, 1518, 1777
Sau96I	GGNCC	6 cut(s)	376, 415, 612, 863, 1141, 1578
ScaI	AGTACT	1 cut(s)	1422
SchI	GAGTC	2 cut(s)	1272, 1550
ScrFI	CCNGG	3 cut(s)	1038, 1145, 1857
SexAI	ACCWGGT	1 cut(s)	1143
SfaNI	GCATC	5 cut(s)	100, 423, 1153, 1600, 1779
SfcI	CTRYAG	1 cut(s)	1614
SinI	GGWCC	4 cut(s)	415, 612, 1141, 1578
SmiMI	CAYNNNNRTG	7 cut(s)	72, 518, 534, 716, 1241, 1437, 1766
SmlI	CTYRAG	4 cut(s)	176, 671, 1294, 1781
SmoI	CTYRAG	4 cut(s)	176, 671, 1294, 1781
Sse9I	AATT	6 cut(s)	653, 981, 1288, 1406, 1489, 1698
SsiI	CCGC	3 cut(s)	211, 662, 1877
SspI	AATATT	1 cut(s)	598
StyD4I	CCNGG	3 cut(s)	1036, 1143, 1855
TaaI	ACNGT	5 cut(s)	134, 246, 705, 925, 1808
TaiI	ACGT	5 cut(s)	46, 190, 277, 1688, 1708
TaqI	TCGA	4 cut(s)	312, 526, 1175, 1696
TasI	AATT	6 cut(s)	653, 981, 1288, 1406, 1489, 1698
TatI	WGTACW	1 cut(s)	1420
TauI	GCSGC	1 cut(s)	213
TfiI	GAWTC	9 cut(s)	137, 460, 503, 619, 948, 1002, 1081, 1300, 1379
Tru1I	TTAA	5 cut(s)	29, 177, 237, 282, 812
Tru9I	TTAA	5 cut(s)	29, 177, 237, 282, 812
TscAI	CASTG	4 cut(s)	1091, 1330, 1345, 1768
TseFI	GTSAC	4 cut(s)	161, 341, 1644, 1868
TseI	GCWGC	6 cut(s)	49, 440, 722, 791, 904, 1613
Tsp45I	GTSAC	4 cut(s)	161, 341, 1644, 1868
TspDTI	ATGAA	8 cut(s)	90, 362, 530, 572, 591, 1218, 1431, 1677
TspRI	CASTG	4 cut(s)	1091, 1330, 1345, 1768
Vha464I	CTTAAG	1 cut(s)	176
VpaK11BI	GGWCC	4 cut(s)	415, 612, 1141, 1578
XapI	RAATTY	1 cut(s)	1489
XceI	RCATGY	2 cut(s)	23, 1652
XcmI	CCANNNNNNNNNTGG	1 cut(s)	386
ZrmI	AGTACT	1 cut(s)	1422

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.