Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0002950

Physical Location & Seq

Genomic Coordinates Reverse (-)

40358681 .. 40360800

Gene Structure 2120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013755

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGAACATCTCCGTCGATGGTTTAGCCCTCCAACGCCACCAAGAAGAACACGAGGAACAGAAACGCCGCCAGCACCAGCTTCTCTCCAATCTCCGCTCTTCCTCCTCTGATTCCGTCCCCAACAACTCCAATTCCGACCGGGACAGGGATCGGGACCGCGATAGGGACCGGGACAGCGACCGATACTCCAGAAGCGATGGAGATCGCGACCATGAGCTTGAAAAAAATTGGAGCGGCGCAACCGTGACCGTGAGAGGGAGCGCGAAGAGGAGGCCAAGGCCCGAGAGCATGCTCGATTGGACAAATGAGCGGACCACGAGAGTGATAAGGAGCTTGAGGCAATCAAAGAGCAGTATCTGGGCTCGAAGAAGTCGAAGAAGCGTGTTATTAAACCTAGCGAGAAGTTCTGATTCTCTTTCGATTGGGAGAATAACACTTCGCGAGAGGGAGCTTAGGGATGAGATTCAGAATAAGGACGGCGTGGAGGAGAGGCCGGAGGAGGCTGCGGCGCAGAGGCTCAAGGAGGAGGCTGCTGGGCTATATGATACTTTTGATATGAGAGTGGGTCGGCATTGGACTGATAAGAAGCTGGAGGAGATGACTGAGAGGGACTGGAGGATATTCCGAGAAGACTTCAATATATCCTACAAAGGCTCTAGGATTCCTCCCCTTATGAGGAGTTGGGTTGAGAGTAGATTGAGTACGGAGCTGCACAAGGCTGTGGAGAGGGCTGGTTATAAGAAGCCTTCTCCGATTCAGATGACTGCCATTCCTCTGGGCCTGTTGCCTCCTATTAGTGAGGAGAATGAGGATGAAGGTCCTTATGCTGTTGTCATGGCACCTACTCTTGAGCTTGCACAGCAGATTGAGGAAGAGACTGTCAAGTTTGCACATTACTTGGGCATTAAAGTGGTTTCTATTGTTGGCGGGCAATCAATTGAAGAACATGGTTTTAAAATTAGGCAAGGATGTGAGGTTGTTATTTCTACGCCATGGTGGTTGATTGATTGTTTGGGGAGGCGTTATGCTGTTTTGAATCAGTGCAATTATGTTGTTCTTGATGAGGCTGATAGGATGATTGATATGGGGTTTGAGCCGCAGGTTATAGGTGTTTTGGATGCAATGGCTTCCAGCAATTTCAAACCTGAGAATGAGGATGAAGAGCTTGACAACAAGAAGATTTACAGAACCACTTATATGTTTAGTGCAACCATGCCTCCTGCGGTGGAGCGCTTTGCTCGGAAGTATTTTAGGAATCCTGTTGTGGTTACAATTGGCACAGCTGGAAAAACTACTGATTTGATCACTCAGAATGTGGTCTGGAGTAAGGATGCAGAGAAGTTTGAGAGGTTAAAGAGATTGCTTGATGAACTTGGTGATAAGACTGCTATTGTGTTTGTTAACACCAAGAAAACTGCTGATTATGTAGCCAAGAGTTTGGATAAGAATGGATATCGTGTGACCACTTTGCATGGGGGGAAATCACAAGACCAGACAGAAATTAGTCTTGAAGGTTTCAGGACCAGGAGGTACAATGTCCTTGTTGCAACGGATGTTGCTAGACGTGGTATTGATATACCTGATGTGGCCCATGTAATTAATTATGATATGCCCTCAAGTATTGAAACGTACACCCATCGTATTGGACGTACTGGACGTGCAGGGAAGACTGGTATAGCCACATCATTGTTGACAATTCACAACACTGATGTCTTCTATGATCTCAAGCAGATGCTCATTCAGAGTAACAGTCATGTTCCCCCTGAATTGGCAAAACATGAAGCCTCAAAGTTCAAGCCTGGTTCTATTCCTGATAGGCCACCTAGACGGAATGACACTATCTTTACGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

618

Amino Acids

70.79

Weight (kDa)

8.18

Isoelectric Point (pI)

51.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	269 - 411	3.3e-26	DEAD/DEAH box helicase
Helicase_C	PF00271	446 - 555	4e-33	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28180 AT1G28180 AT2G33730
fragaria_vesca	FvH4_1g07870 FvH4_2g13750
malus_domestica	MD05G1025300.v1.1 MD10G1025500.v1.1
prunus_persica	Prupe.8G029000_v2.0.a1 Prupe.8G029000_v2.0.a1
pyrus_communis	pycom05g01650 pycom10g01680
rosa_chinensis	RchiOBHm_Chr1g0333041 RchiOBHm_Chr2g0093751 RchiOBHm_Chr2g0093761 RchiOBHm_Chr6g0275441
rosa_laevigata	RLG00000013755 RLG00000016434
rosa_multiflora	Rmu_sc0004143.1_g000018 Rmu_sc0021925.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237200 Rroxscaffold_7G00193300
rosa_rugosa	Rorug02G0039500 Rorug06G0092300 Rorug06G0092400 Rorug07G0206900
rosa_samantha	Rh1AG129900 Rh1CG123700 Rh1DG135400 Rh2BG086300 Rh2CG088700 Rh2DG084300 Rh2DG084400 Rh6AG205700 Rh6CG210900 Rh6DG201100 Rh7BG338800
rosa_wichuraiana	Rw1G010290 Rw6G017840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	738
Acc36I	ACCTGC	1 cut(s)	1090
AccB1I	GGYRCC	1 cut(s)	838
AccBSI	CCGCTC	3 cut(s)	96, 234, 310
AccII	CGCG	4 cut(s)	159, 207, 263, 441
AciI	CCGC	9 cut(s)	67, 94, 157, 234, 310, 506, 927, 1097, 1223
AclWI	GGATC	1 cut(s)	156
AfaI	GTAC	4 cut(s)	703, 1532, 1631, 1651
AfeI	AGCGCT	1 cut(s)	1232
AfiI	CCNNNNNNNGG	5 cut(s)	145, 163, 255, 675, 1768
AgsI	TTSAA	8 cut(s)	221, 637, 941, 1036, 1141, 1511, 1625, 1795
AjiI	CACGTC	2 cut(s)	1565, 1658
AjnI	CCWGG	2 cut(s)	1523, 1798
AleI	CACNNNNGTG	1 cut(s)	320
AluBI	AGCT	9 cut(s)	79, 217, 333, 451, 589, 709, 853, 1165, 1283
AluI	AGCT	9 cut(s)	79, 217, 333, 451, 589, 709, 853, 1165, 1283
Alw26I	GTCTC	1 cut(s)	869
AlwI	GGATC	1 cut(s)	156
AlwNI	CAGNNNCTG	1 cut(s)	357
Ama87I	CYCGRG	1 cut(s)	281
Aor51HI	AGCGCT	1 cut(s)	1232
AoxI	GGCC	6 cut(s)	272, 278, 491, 778, 1587, 1817
ApeKI	GCWGC	3 cut(s)	503, 530, 709
AseI	ATTAAT	1 cut(s)	1599
AspLEI	GCGC	4 cut(s)	239, 263, 511, 1233
AspS9I	GGNCC	8 cut(s)	154, 166, 279, 312, 778, 818, 1521, 1588
AsuC2I	CCSGG	2 cut(s)	140, 170
AsuHPI	GGTGA	1 cut(s)	1388
AvaI	CYCGRG	1 cut(s)	281
AvaII	GGWCC	5 cut(s)	154, 166, 312, 818, 1521
BanI	GGYRCC	1 cut(s)	838
BanII	GRGCYC	1 cut(s)	364
BauI	CACGAG	2 cut(s)	50, 316
BbsI	GAAGAC	3 cut(s)	636, 1673, 1705
BbvI	GCAGC	3 cut(s)	490, 517, 696
BccI	CCATC	3 cut(s)	11, 191, 1644
BceAI	ACGGC	1 cut(s)	493
BciT130I	CCWGG	2 cut(s)	1525, 1800
BclI	TGATCA	1 cut(s)	1302
BcnI	CCSGG	2 cut(s)	140, 170
BcoDI	GTCTC	1 cut(s)	869
BfaI	CTAG	4 cut(s)	395, 657, 1560, 1824
BfoI	RGCGCY	1 cut(s)	1234
BfuAI	ACCTGC	1 cut(s)	1090
BisI	GCNGC	7 cut(s)	67, 235, 504, 507, 531, 710, 1097
BlsI	GCNGC	7 cut(s)	68, 236, 505, 508, 532, 711, 1098
Bme1390I	CCNGG	4 cut(s)	140, 170, 1525, 1800
Bme18I	GGWCC	5 cut(s)	154, 166, 312, 818, 1521
BmeT110I	CYCGRG	1 cut(s)	281
BmgBI	CACGTC	2 cut(s)	1565, 1658
BmgT120I	GGNCC	8 cut(s)	154, 166, 279, 312, 778, 818, 1521, 1588
BmiI	GGNNCC	3 cut(s)	155, 167, 840
BmrFI	CCNGG	4 cut(s)	140, 170, 1525, 1800
BmsI	GCATC	3 cut(s)	1108, 1321, 1722
BpiI	GAAGAC	3 cut(s)	636, 1673, 1705
BpmI	CTGGAG	4 cut(s)	172, 611, 634, 1342
Bpu10I	CCTNAGC	1 cut(s)	452
BpuEI	CTTGAG	5 cut(s)	355, 503, 869, 1600, 1709
BpuMI	CCSGG	2 cut(s)	140, 170
BsaBI	GATNNNNATC	1 cut(s)	201
BsaJI	CCNNGG	2 cut(s)	275, 992
BsaXI	ACNNNNNCTCC	4 cut(s)	170, 200, 1201, 1231
Bsc4I	CCNNNNNNNGG	5 cut(s)	145, 163, 255, 675, 1768
Bse1I	ACTGG	3 cut(s)	617, 1657, 1675
Bse3DI	GCAATG	1 cut(s)	1128
Bse8I	GATNNNNATC	1 cut(s)	201
BseBI	CCWGG	2 cut(s)	1525, 1800
BseDI	CCNNGG	2 cut(s)	275, 992
BseGI	GGATG	8 cut(s)	463, 817, 974, 1080, 1123, 1162, 1336, 1558
BseJI	GATNNNNATC	1 cut(s)	201
BseLI	CCNNNNNNNGG	5 cut(s)	145, 163, 255, 675, 1768
BseMI	GCAATG	1 cut(s)	1128
BseMII	CTCAG	3 cut(s)	594, 1137, 1322
BseNI	ACTGG	3 cut(s)	617, 1657, 1675
BseRI	GAGGAG	8 cut(s)	94, 283, 500, 512, 539, 608, 691, 815
BseXI	GCAGC	3 cut(s)	490, 517, 696
BseYI	CCCAGC	1 cut(s)	533
BsgI	GTGCAG	2 cut(s)	695, 1680
Bsh1236I	CGCG	4 cut(s)	159, 207, 263, 441
Bsh1285I	CGRYCG	2 cut(s)	139, 181
BshFI	GGCC	6 cut(s)	274, 280, 493, 780, 1589, 1819
BshNI	GGYRCC	1 cut(s)	838
BsiEI	CGRYCG	2 cut(s)	139, 181
BsiHKCI	CYCGRG	1 cut(s)	281
BsiSI	CCGG	3 cut(s)	139, 169, 494
BslFI	GGGAC	6 cut(s)	101, 155, 167, 179, 185, 623
BslI	CCNNNNNNNGG	5 cut(s)	145, 163, 255, 675, 1768
BsmAI	GTCTC	1 cut(s)	869
BsmFI	GGGAC	6 cut(s)	101, 155, 167, 179, 185, 623
BsnI	GGCC	6 cut(s)	274, 280, 493, 780, 1589, 1819
BsoBI	CYCGRG	1 cut(s)	281
Bsp1286I	GDGCHC	1 cut(s)	364
Bsp143I	GATC	4 cut(s)	148, 202, 1302, 1720
Bsp19I	CCATGG	1 cut(s)	992
Bsp68I	TCGCGA	2 cut(s)	207, 441
BspACI	CCGC	9 cut(s)	67, 94, 157, 234, 310, 506, 927, 1097, 1223
BspANI	GGCC	6 cut(s)	274, 280, 493, 780, 1589, 1819
BspCNI	CTCAG	3 cut(s)	595, 1138, 1321
BspFNI	CGCG	4 cut(s)	159, 207, 263, 441
BspLI	GGNNCC	3 cut(s)	155, 167, 840
BspMI	ACCTGC	1 cut(s)	1090
BspPI	GGATC	1 cut(s)	156
BspQI	GCTCTTC	2 cut(s)	103, 1155
BspT107I	GGYRCC	1 cut(s)	838
BsrBI	CCGCTC	3 cut(s)	96, 234, 310
BsrDI	GCAATG	1 cut(s)	1128
BsrI	ACTGG	3 cut(s)	617, 1657, 1675
BssECI	CCNNGG	2 cut(s)	275, 992
BssMI	GATC	4 cut(s)	148, 202, 1302, 1720
BssSI	CACGAG	2 cut(s)	50, 316
BssT1I	CCWWGG	2 cut(s)	275, 992
Bst2BI	CACGAG	2 cut(s)	50, 316
Bst2UI	CCWGG	2 cut(s)	1525, 1800
Bst4CI	ACNGT	4 cut(s)	244, 250, 880, 1751
Bst6I	CTCTTC	4 cut(s)	103, 260, 867, 1155
BstC8I	GCNNGC	4 cut(s)	71, 290, 855, 929
BstDEI	CTNAG	4 cut(s)	452, 603, 1146, 1308
BstDSI	CCRYGG	1 cut(s)	992
BstF5I	GGATG	8 cut(s)	463, 817, 974, 1080, 1123, 1162, 1336, 1558
BstFNI	CGCG	4 cut(s)	159, 207, 263, 441
BstH2I	RGCGCY	1 cut(s)	1234
BstHHI	GCGC	4 cut(s)	239, 263, 511, 1233
BstKTI	GATC	4 cut(s)	151, 205, 1305, 1723
BstMAI	GTCTC	1 cut(s)	869
BstMBI	GATC	4 cut(s)	148, 202, 1302, 1720
BstMCI	CGRYCG	2 cut(s)	139, 181
BstMWI	GCNNNNNNNGC	1 cut(s)	859
BstNI	CCWGG	2 cut(s)	1525, 1800
BstNSI	RCATGY	1 cut(s)	292
BstSCI	CCNGG	4 cut(s)	138, 168, 1523, 1798
BstUI	CGCG	4 cut(s)	159, 207, 263, 441
BstV1I	GCAGC	3 cut(s)	490, 517, 696
BstV2I	GAAGAC	3 cut(s)	636, 1673, 1705
BstXI	CCANNNNNNTGG	3 cut(s)	775, 1438, 1643
BsuRI	GGCC	6 cut(s)	274, 280, 493, 780, 1589, 1819
BtgI	CCRYGG	1 cut(s)	992
BtgZI	GCGATG	1 cut(s)	210
BtrI	CACGTC	2 cut(s)	1565, 1658
BtsCI	GGATG	8 cut(s)	463, 817, 974, 1080, 1123, 1162, 1336, 1558
BtsIMutI	CAGTG	2 cut(s)	1046, 1704
BtuMI	TCGCGA	2 cut(s)	207, 441
BveI	ACCTGC	1 cut(s)	1090
Cac8I	GCNNGC	4 cut(s)	71, 290, 855, 929
CaiI	CAGNNNCTG	1 cut(s)	357
CfoI	GCGC	4 cut(s)	239, 263, 511, 1233
Cfr13I	GGNCC	8 cut(s)	154, 166, 279, 312, 778, 818, 1521, 1588
Csp6I	GTAC	4 cut(s)	702, 1531, 1630, 1650
CviQI	GTAC	4 cut(s)	702, 1531, 1630, 1650
DdeI	CTNAG	4 cut(s)	452, 603, 1146, 1308
DpnI	GATC	4 cut(s)	150, 204, 1304, 1722
DpnII	GATC	4 cut(s)	148, 202, 1302, 1720
DraI	TTTAAA	1 cut(s)	955
Eam1104I	CTCTTC	4 cut(s)	103, 260, 867, 1155
EarI	CTCTTC	4 cut(s)	103, 260, 867, 1155
Eco130I	CCWWGG	2 cut(s)	275, 992
Eco24I	GRGCYC	1 cut(s)	364
Eco32I	GATATC	1 cut(s)	1454
Eco47I	GGWCC	5 cut(s)	154, 166, 312, 818, 1521
Eco47III	AGCGCT	1 cut(s)	1232
Eco88I	CYCGRG	1 cut(s)	281
EcoO109I	RGGNCCY	1 cut(s)	818
EcoRII	CCWGG	2 cut(s)	1523, 1798
EcoRV	GATATC	1 cut(s)	1454
EcoT14I	CCWWGG	2 cut(s)	275, 992
EcoT38I	GRGCYC	1 cut(s)	364
ErhI	CCWWGG	2 cut(s)	275, 992
FaqI	GGGAC	6 cut(s)	101, 155, 167, 179, 185, 623
FauI	CCCGC	1 cut(s)	920
FbaI	TGATCA	1 cut(s)	1302
Fnu4HI	GCNGC	7 cut(s)	67, 235, 504, 507, 531, 710, 1097
FokI	GGATG	8 cut(s)	470, 824, 981, 1087, 1130, 1169, 1343, 1565
FriOI	GRGCYC	1 cut(s)	364
Fsp4HI	GCNGC	7 cut(s)	67, 235, 504, 507, 531, 710, 1097
FspBI	CTAG	4 cut(s)	395, 657, 1560, 1824
GlaI	GCGC	4 cut(s)	238, 262, 510, 1232
GluI	GCNGC	7 cut(s)	67, 235, 504, 507, 531, 710, 1097
GsaI	CCCAGC	1 cut(s)	537
GsuI	CTGGAG	4 cut(s)	172, 611, 634, 1342
HaeII	RGCGCY	1 cut(s)	1234
HaeIII	GGCC	6 cut(s)	274, 280, 493, 780, 1589, 1819
HapII	CCGG	3 cut(s)	139, 169, 494
HhaI	GCGC	4 cut(s)	239, 263, 511, 1233
Hin6I	GCGC	4 cut(s)	237, 261, 509, 1231
HinP1I	GCGC	4 cut(s)	237, 261, 509, 1231
HincII	GTYRAC	2 cut(s)	1402, 1692
HindII	GTYRAC	2 cut(s)	1402, 1692
HinfI	GANTC	7 cut(s)	110, 410, 463, 661, 754, 1036, 1255
HpaI	GTTAAC	1 cut(s)	1402
HpaII	CCGG	3 cut(s)	139, 169, 494
HphI	GGTGA	1 cut(s)	1388
Hpy166II	GTNNAC	3 cut(s)	1402, 1632, 1692
Hpy8I	GTNNAC	3 cut(s)	1402, 1632, 1692
Hpy99I	CGWCG	1 cut(s)	17
HpyAV	CCTTC	3 cut(s)	756, 809, 1505
HpyCH4III	ACNGT	4 cut(s)	244, 250, 880, 1751
HpyCH4IV	ACGT	4 cut(s)	1564, 1628, 1648, 1657
HpyF10VI	GCNNNNNNNGC	1 cut(s)	859
HpyF3I	CTNAG	4 cut(s)	452, 603, 1146, 1308
HpySE526I	ACGT	4 cut(s)	1564, 1628, 1648, 1657
HspAI	GCGC	4 cut(s)	237, 261, 509, 1231
Ksp22I	TGATCA	1 cut(s)	1302
KspAI	GTTAAC	1 cut(s)	1402
Kzo9I	GATC	4 cut(s)	148, 202, 1302, 1720
LguI	GCTCTTC	2 cut(s)	103, 1155
LmnI	GCTCC	6 cut(s)	231, 258, 330, 448, 706, 1228
Lsp1109I	GCAGC	3 cut(s)	490, 517, 696
LweI	GCATC	3 cut(s)	1108, 1321, 1722
MaeI	CTAG	4 cut(s)	395, 657, 1560, 1824
MaeII	ACGT	4 cut(s)	1564, 1628, 1648, 1657
MaeIII	GTNAC	4 cut(s)	244, 1267, 1459, 1745
MalI	GATC	4 cut(s)	150, 204, 1304, 1722
MbiI	CCGCTC	3 cut(s)	96, 234, 310
MboI	GATC	4 cut(s)	148, 202, 1302, 1720
MfeI	CAATTG	2 cut(s)	936, 1272
MhlI	GDGCHC	1 cut(s)	364
MmeI	TCCRAC	2 cut(s)	55, 159
MseI	TTAA	6 cut(s)	389, 906, 954, 1352, 1401, 1599
MslI	CAYNNNNRTG	3 cut(s)	320, 908, 1196
MspA1I	CMGCKG	1 cut(s)	1283
MspI	CCGG	3 cut(s)	139, 169, 494
MspR9I	CCNGG	4 cut(s)	140, 170, 1525, 1800
MunI	CAATTG	2 cut(s)	936, 1272
MvaI	CCWGG	2 cut(s)	1525, 1800
MvnI	CGCG	4 cut(s)	159, 207, 263, 441
MwoI	GCNNNNNNNGC	1 cut(s)	859
NciI	CCSGG	2 cut(s)	140, 170
NcoI	CCATGG	1 cut(s)	992
NdeII	GATC	4 cut(s)	148, 202, 1302, 1720
NlaIV	GGNNCC	3 cut(s)	155, 167, 840
NmuCI	GTSAC	2 cut(s)	244, 1459
NruI	TCGCGA	2 cut(s)	207, 441
NspI	RCATGY	1 cut(s)	292
OliI	CACNNNNGTG	1 cut(s)	320
PaeI	GCATGC	1 cut(s)	292
PciSI	GCTCTTC	2 cut(s)	103, 1155
PcsI	WCGNNNNNNNCGW	3 cut(s)	370, 1645, 1654
PfeI	GAWTC	7 cut(s)	110, 410, 463, 661, 754, 1036, 1255
PkrI	GCNGC	7 cut(s)	68, 236, 505, 508, 532, 711, 1098
PpuMI	RGGWCCY	1 cut(s)	818
PshBI	ATTAAT	1 cut(s)	1599
PsiI	TTATAA	1 cut(s)	738
Psp5II	RGGWCCY	1 cut(s)	818
Psp6I	CCWGG	2 cut(s)	1523, 1798
PspFI	CCCAGC	1 cut(s)	533
PspGI	CCWGG	2 cut(s)	1523, 1798
PspN4I	GGNNCC	3 cut(s)	155, 167, 840
PspPI	GGNCC	8 cut(s)	154, 166, 279, 312, 778, 818, 1521, 1588
PspPPI	RGGWCCY	1 cut(s)	818
PstNI	CAGNNNCTG	1 cut(s)	357
PvuII	CAGCTG	1 cut(s)	1283
RruI	TCGCGA	2 cut(s)	207, 441
RsaI	GTAC	4 cut(s)	703, 1532, 1631, 1651
RsaNI	GTAC	4 cut(s)	702, 1531, 1630, 1650
RseI	CAYNNNNRTG	3 cut(s)	320, 908, 1196
SapI	GCTCTTC	2 cut(s)	103, 1155
SaqAI	TTAA	6 cut(s)	389, 906, 954, 1352, 1401, 1599
SatI	GCNGC	7 cut(s)	67, 235, 504, 507, 531, 710, 1097
Sau3AI	GATC	4 cut(s)	148, 202, 1302, 1720
Sau96I	GGNCC	8 cut(s)	154, 166, 279, 312, 778, 818, 1521, 1588
ScrFI	CCNGG	4 cut(s)	140, 170, 1525, 1800
SduI	GDGCHC	1 cut(s)	364
SfaNI	GCATC	3 cut(s)	1108, 1321, 1722
SinI	GGWCC	5 cut(s)	154, 166, 312, 818, 1521
SmiMI	CAYNNNNRTG	3 cut(s)	320, 908, 1196
SmlI	CTYRAG	5 cut(s)	334, 518, 848, 1615, 1724
SmoI	CTYRAG	5 cut(s)	334, 518, 848, 1615, 1724
SphI	GCATGC	1 cut(s)	292
SsiI	CCGC	9 cut(s)	67, 94, 157, 234, 310, 506, 927, 1097, 1223
SspMI	CTAG	4 cut(s)	395, 657, 1560, 1824
StyD4I	CCNGG	4 cut(s)	138, 168, 1523, 1798
StyI	CCWWGG	2 cut(s)	275, 992
TaaI	ACNGT	4 cut(s)	244, 250, 880, 1751
TaiI	ACGT	4 cut(s)	1567, 1631, 1651, 1660
TaqI	TCGA	5 cut(s)	15, 294, 364, 373, 419
TaqII	GACCGA	1 cut(s)	195
TauI	GCSGC	4 cut(s)	69, 237, 509, 1099
TfiI	GAWTC	7 cut(s)	110, 410, 463, 661, 754, 1036, 1255
Tru1I	TTAA	6 cut(s)	389, 906, 954, 1352, 1401, 1599
Tru9I	TTAA	6 cut(s)	389, 906, 954, 1352, 1401, 1599
TscAI	CASTG	2 cut(s)	1046, 1711
TseFI	GTSAC	2 cut(s)	244, 1459
TseI	GCWGC	3 cut(s)	503, 530, 709
Tsp45I	GTSAC	2 cut(s)	244, 1459
TspDTI	ATGAA	5 cut(s)	17, 828, 1173, 1383, 1794
TspGWI	ACGGA	4 cut(s)	103, 719, 1565, 1843
TspRI	CASTG	2 cut(s)	1046, 1711
VpaK11BI	GGWCC	5 cut(s)	154, 166, 312, 818, 1521
VspI	ATTAAT	1 cut(s)	1599
XceI	RCATGY	1 cut(s)	292
XspI	CTAG	4 cut(s)	395, 657, 1560, 1824

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.