Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0002950

Physical Location & Seq

Genomic Coordinates Forward (+)

2046184 .. 2048366

Gene Structure 2183 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g01650.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGAAACGCTCAGCTGAGGCCGTTCCCATCGCCGCCTCCTCCGCCACCGCCTCCTCCTCCCTGCCGCCCAAGAAACCCGTTTTCTTAACCAAAGCCCAACGGGAGCAATTAGCCCTCCAACGCCGCCAAGAACAAACCGAATACCAGAAACGCCACCAACACCATCTTCTCTCCAGTCTCTCCCACTCGCGCCCTTCCTCCGACAACGCACCGCCCGCAACCACCACTAGTTCTGACCGAGACCAAGATCGAGATAGAGACAGAGACCGAGATCATAGGGACCGAGACCGATACCGAGACAGGGACCGATATTCCCGTGACCGGGAACGAGACCGGGAGCGAGATTCCGAGCGGCGGAACCGCGACCGCGACCGAGATAGGGAGCGCGAAGAGGAGGCCAAGGCTAGAGAGCGTGCCCGCTTTGACAAATTGGCCGAGCGCGAGCGGGACAAAGAGCTGGAAGCCATTAAAGAGCAGTATCTTGGATCGAAGAAGCCCAAGAAGCGAGTGATCAAACCCAGCGAGAAGTTCCGATTCTCTTTCGATTGGGAGAACACAGAGGACACTTCTCGGGACATGAATGCTCTGTATCAAAACCCTCACGAGGCCCAGCTTTTGTTTGGGCGAGGGTTTCGGGCCGGGATGGACCGAAGGGAGCAGAAGAAGCTTGCTGTGAAGTACGAGAGGGAGCTGCGAGAGGAGATTCGGAAGAAAGACGGCGTGGAGGAGAGGCCTGAGGAGGCCGCTGCTCAGAGGCTTAAGGAGGAGGCTGCGGAAATGTATGACACTTTCGACATGAGGGTTGATCGCCATTGGACTGATAAGAAGCTTGAAGAGATGACTGAGAGGGACTGGAGGATTTTTCGAGAGGATTTTAACATTTCGTATAAGGGGTCAAGGATTCCGAGGCCAATGAGGAGTTGGGCAGAGAGTAAATTGAGTGAGGAGTTGCTTAAGACTGTGGAGAAGGCTGGGTACAAAAAGCCTTCCCCGATTCAGATGGCGGCGATTCCACTTGGCATGCAACAGCGCGATGTTATTGGCATTGCTGAGACTGGTTCTGGTAAGACTGCTGCCTTTGTTCTTCCTATGTTGACTTATATTTCGAGGTTGCCTCCCATTAGTGAGGAGAATGCGGCAGAAGGGCCTTACGCTGTTGTTATGGCGCCTACTCGTGAGCTTGCACAGCAGATTGAGGATGAGACTAACAAGTTTGCGCAATTCTTGGGTATCAAAGTGGTTTCCATTGTTGGTGGGCAGTCCATCGAGGATCAAGGGTTTAGAATTAGGCAAGGATGTGCAGTTGTAATTGCCACTCCAGGGCGTTTGATTGATTGCTTGGAGAGGCGTTATGCAGTTCTTAACCAGTGCAATTATGTTGTGCTTGATGAGGCTGATAGGATGATTGATATGGGGTTCGAGCCACAGGTTGTGGGAGTTTTAGATGCAATGCCCTCCAGCAATTTCAAACCTGAGAATGAGGACGAAGAACTTGATGAGAAGAAGATATACAGAACCACTTATATGTTCAGTGCCACCATGCCGCCTGCTGTGGAGCGGCTTGCTAGGAAGTACTTGAGGAATCCTGTTGTGGTCACTATTGGCACGGCTGGAAAGACAACTGATTTGATCACTCAGAATGCGATCATGAGCAAGGAATCTGAGAAATTTGAGAGATTAAAGAGATTGCTTGACGAACTTGGTGATAAGACTGCTATTGTGTTCGTTAACACCAAGAAGAATGCTGACTATGTTGCTAAGAGTTTGGATAAGAATGGATATCGTGTTACCACTTTGCATGGAGGGAAGTCACAGGAGCAGAGAGAAATTAGCCTCGAAGGTTTTCGGACCAAGAAATACAATGTTCTAGTTGCGACCGATGTTGCAGGTCGTGGGATTGACATACCTGATGTGGCCTATGTTATTAATTATGATATGCCTGGGAATATCGAACAGTACACTCATCGTATTGGGCGTACTGGCCGTGCAGGGAAGACTGGTGTGGCCACAACATTCTTGACTATGCATGACACGGATGTATTTTATGATCCTTCAAGCAGATGCTTATTCAGATTCAAGCCAGGTTCAGTTCCTGATAGACCACCAAGGCGTAATGATACTATTTTTACTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

712

Amino Acids

82.2

Weight (kDa)

9.02

Isoelectric Point (pI)

43.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28180 AT1G28180 AT2G33730
fragaria_vesca	FvH4_1g07870 FvH4_2g13750
malus_domestica	MD05G1025300.v1.1 MD10G1025500.v1.1
prunus_persica	Prupe.8G029000_v2.0.a1 Prupe.8G029000_v2.0.a1
pyrus_communis	pycom05g01650 pycom10g01680
rosa_chinensis	RchiOBHm_Chr1g0333041 RchiOBHm_Chr2g0093751 RchiOBHm_Chr2g0093761 RchiOBHm_Chr6g0275441
rosa_laevigata	RLG00000013755 RLG00000016434
rosa_multiflora	Rmu_sc0004143.1_g000018 Rmu_sc0021925.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237200 Rroxscaffold_7G00193300
rosa_rugosa	Rorug02G0039500 Rorug06G0092300 Rorug06G0092400 Rorug07G0206900
rosa_samantha	Rh1AG129900 Rh1CG123700 Rh1DG135400 Rh2BG086300 Rh2CG088700 Rh2DG084300 Rh2DG084400 Rh6AG205700 Rh6CG210900 Rh6DG201100 Rh7BG338800
rosa_wichuraiana	Rw1G010290 Rw6G017840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1218
Acc36I	ACCTGC	1 cut(s)	1877
AccB1I	GGYRCC	1 cut(s)	1165
AccBSI	CCGCTC	3 cut(s)	352, 445, 1558
AccII	CGCG	6 cut(s)	190, 363, 369, 387, 441, 1032
AclWI	GGATC	3 cut(s)	493, 1278, 2042
AcoI	YGGCCR	3 cut(s)	432, 1981, 2004
AcsI	RAATTY	1 cut(s)	1667
AcyI	GRCGYC	1 cut(s)	1166
AfaI	GTAC	5 cut(s)	680, 977, 1574, 1958, 1978
AfiI	CCNNNNNNNGG	7 cut(s)	301, 321, 322, 354, 379, 604, 1320
AflII	CTTAAG	2 cut(s)	758, 953
AgsI	TTSAA	4 cut(s)	833, 1468, 2055, 2077
AhlI	ACTAGT	1 cut(s)	227
AjnI	CCWGG	3 cut(s)	1318, 1939, 2080
AjuI	GAANNNNNNNTTGG	2 cut(s)	150, 182
AluBI	AGCT	7 cut(s)	14, 457, 613, 667, 691, 829, 1180
AluI	AGCT	7 cut(s)	14, 457, 613, 667, 691, 829, 1180
Alw26I	GTCTC	9 cut(s)	182, 234, 252, 258, 279, 291, 324, 1046, 1196
AlwI	GGATC	3 cut(s)	493, 1278, 2042
AlwNI	CAGNNNCTG	1 cut(s)	2093
Ama87I	CYCGRG	1 cut(s)	570
ApeKI	GCWGC	4 cut(s)	691, 746, 770, 1073
ApoI	RAATTY	1 cut(s)	1667
ArsI	GACNNNNNNTTYG	4 cut(s)	1087, 1119, 1609, 1641
AseI	ATTAAT	1 cut(s)	1926
Asp700I	GAANNNNTTC	1 cut(s)	1842
AspLEI	GCGC	6 cut(s)	192, 387, 441, 1032, 1168, 1219
AspS9I	GGNCC	7 cut(s)	280, 304, 607, 636, 646, 1145, 1848
AsuC2I	CCSGG	3 cut(s)	323, 335, 640
AsuHPI	GGTGA	1 cut(s)	1715
AvaI	CYCGRG	1 cut(s)	570
AvaII	GGWCC	4 cut(s)	280, 304, 646, 1848
AxyI	CCTNAGG	1 cut(s)	735
BaeGI	GKGCMC	1 cut(s)	418
BalI	TGGCCA	1 cut(s)	2006
BanI	GGYRCC	1 cut(s)	1165
BarI	GAAGNNNNNNTAC	4 cut(s)	959, 991, 1493, 1525
BauI	CACGAG	2 cut(s)	602, 1173
BbsI	GAAGAC	1 cut(s)	2000
BbvCI	CCTCAGC	1 cut(s)	15
BbvI	GCAGC	4 cut(s)	678, 733, 757, 1060
BccI	CCATC	5 cut(s)	35, 171, 637, 994, 1271
BceAI	ACGGC	4 cut(s)	5, 733, 1623, 1968
BciT130I	CCWGG	3 cut(s)	1320, 1941, 2082
BclI	TGATCA	2 cut(s)	510, 1629
BcnI	CCSGG	3 cut(s)	323, 335, 640
BcoDI	GTCTC	9 cut(s)	182, 234, 252, 258, 279, 291, 324, 1046, 1196
BcuI	ACTAGT	1 cut(s)	227
BfaI	CTAG	4 cut(s)	228, 405, 1566, 1868
BfoI	RGCGCY	1 cut(s)	1169
BfrI	CTTAAG	2 cut(s)	758, 953
BfuAI	ACCTGC	1 cut(s)	1877
BlpI	GCTNAGC	1 cut(s)	10
BmcAI	AGTACT	1 cut(s)	1574
Bme1390I	CCNGG	6 cut(s)	323, 335, 640, 1320, 1941, 2082
Bme18I	GGWCC	4 cut(s)	280, 304, 646, 1848
BmeT110I	CYCGRG	1 cut(s)	570
BmgT120I	GGNCC	7 cut(s)	280, 304, 607, 636, 646, 1145, 1848
BmiI	GGNNCC	4 cut(s)	281, 305, 359, 1167
BmrFI	CCNGG	6 cut(s)	323, 335, 640, 1320, 1941, 2082
BmsI	GCATC	2 cut(s)	1435, 2051
BpiI	GAAGAC	1 cut(s)	2000
BplI	GAGNNNNNCTC	2 cut(s)	1099, 1131
BpmI	CTGGAG	4 cut(s)	157, 874, 1302, 1441
Bpu10I	CCTNAGC	1 cut(s)	15
Bpu1102I	GCTNAGC	1 cut(s)	10
BpuEI	CTTGAG	1 cut(s)	1597
BpuMI	CCSGG	3 cut(s)	323, 335, 640
BsaHI	GRCGYC	1 cut(s)	1166
BsaI	GGTCTC	4 cut(s)	234, 258, 279, 324
BsaJI	CCNNGG	5 cut(s)	399, 905, 1319, 1940, 2105
Bsc4I	CCNNNNNNNGG	7 cut(s)	301, 321, 322, 354, 379, 604, 1320
Bse1I	ACTGG	6 cut(s)	174, 857, 1060, 1366, 1984, 2002
Bse21I	CCTNAGG	1 cut(s)	735
Bse3DI	GCAATG	2 cut(s)	1044, 1455
BseBI	CCWGG	3 cut(s)	1320, 1941, 2082
BseDI	CCNNGG	5 cut(s)	399, 905, 1319, 1940, 2105
BseGI	GGATG	5 cut(s)	648, 1204, 1301, 1407, 2041
BseLI	CCNNNNNNNGG	7 cut(s)	301, 321, 322, 354, 379, 604, 1320
BseMI	GCAATG	2 cut(s)	1044, 1455
BseMII	CTCAG	9 cut(s)	6, 24, 726, 764, 834, 1041, 1464, 1649, 1653
BseNI	ACTGG	6 cut(s)	174, 857, 1060, 1366, 1984, 2002
BseSI	GKGCMC	1 cut(s)	418
BseXI	GCAGC	4 cut(s)	678, 733, 757, 1060
BseYI	CCCAGC	3 cut(s)	518, 609, 971
BsgI	GTGCAG	2 cut(s)	1320, 2007
Bsh1236I	CGCG	6 cut(s)	190, 363, 369, 387, 441, 1032
Bsh1285I	CGRYCG	3 cut(s)	367, 373, 1878
BshNI	GGYRCC	1 cut(s)	1165
BsiEI	CGRYCG	3 cut(s)	367, 373, 1878
BsiHKCI	CYCGRG	1 cut(s)	570
BsiSI	CCGG	3 cut(s)	322, 334, 639
BslFI	GGGAC	5 cut(s)	293, 317, 461, 587, 863
BslI	CCNNNNNNNGG	7 cut(s)	301, 321, 322, 354, 379, 604, 1320
BsmAI	GTCTC	9 cut(s)	182, 234, 252, 258, 279, 291, 324, 1046, 1196
BsmFI	GGGAC	5 cut(s)	293, 317, 461, 587, 863
BsmI	GAATGC	4 cut(s)	586, 1138, 1645, 1747
Bso31I	GGTCTC	4 cut(s)	234, 258, 279, 324
BsoBI	CYCGRG	1 cut(s)	570
Bsp1286I	GDGCHC	1 cut(s)	418
Bsp143I	GATC	9 cut(s)	247, 271, 485, 510, 805, 1270, 1629, 1644, 2047
Bsp1720I	GCTNAGC	1 cut(s)	10
BspCNI	CTCAG	9 cut(s)	7, 23, 727, 763, 835, 1042, 1465, 1648, 1654
BspFNI	CGCG	6 cut(s)	190, 363, 369, 387, 441, 1032
BspHI	TCATGA	1 cut(s)	1647
BspLI	GGNNCC	4 cut(s)	281, 305, 359, 1167
BspMI	ACCTGC	1 cut(s)	1877
BspPI	GGATC	3 cut(s)	493, 1278, 2042
BspT107I	GGYRCC	1 cut(s)	1165
BspTI	CTTAAG	2 cut(s)	758, 953
BspTNI	GGTCTC	4 cut(s)	234, 258, 279, 324
BsrBI	CCGCTC	3 cut(s)	352, 445, 1558
BsrDI	GCAATG	2 cut(s)	1044, 1455
BsrI	ACTGG	6 cut(s)	174, 857, 1060, 1366, 1984, 2002
BssECI	CCNNGG	5 cut(s)	399, 905, 1319, 1940, 2105
BssMI	GATC	9 cut(s)	247, 271, 485, 510, 805, 1270, 1629, 1644, 2047
BssNI	GRCGYC	1 cut(s)	1166
BssSI	CACGAG	2 cut(s)	602, 1173
BssT1I	CCWWGG	2 cut(s)	399, 2105
Bst2BI	CACGAG	2 cut(s)	602, 1173
Bst2UI	CCWGG	3 cut(s)	1320, 1941, 2082
Bst4CI	ACNGT	2 cut(s)	961, 1956
Bst6I	CTCTTC	2 cut(s)	384, 828
BstACI	GRCGYC	1 cut(s)	1166
BstAFI	CTTAAG	2 cut(s)	758, 953
BstC8I	GCNNGC	9 cut(s)	216, 414, 418, 443, 669, 1022, 1182, 1548, 1563
BstF5I	GGATG	5 cut(s)	648, 1204, 1301, 1407, 2041
BstFNI	CGCG	6 cut(s)	190, 363, 369, 387, 441, 1032
BstH2I	RGCGCY	1 cut(s)	1169
BstHHI	GCGC	6 cut(s)	192, 387, 441, 1032, 1168, 1219
BstKTI	GATC	9 cut(s)	250, 274, 488, 513, 808, 1273, 1632, 1647, 2050
BstMAI	GTCTC	9 cut(s)	182, 234, 252, 258, 279, 291, 324, 1046, 1196
BstMBI	GATC	9 cut(s)	247, 271, 485, 510, 805, 1270, 1629, 1644, 2047
BstMCI	CGRYCG	3 cut(s)	367, 373, 1878
BstMWI	GCNNNNNNNGC	5 cut(s)	41, 215, 502, 664, 1186
BstNI	CCWGG	3 cut(s)	1320, 1941, 2082
BstNSI	RCATGY	1 cut(s)	1024
BstSCI	CCNGG	6 cut(s)	321, 333, 638, 1318, 1939, 2080
BstSLI	GKGCMC	1 cut(s)	418
BstUI	CGCG	6 cut(s)	190, 363, 369, 387, 441, 1032
BstV1I	GCAGC	4 cut(s)	678, 733, 757, 1060
BstV2I	GAAGAC	1 cut(s)	2000
Bsu36I	CCTNAGG	1 cut(s)	735
BtgZI	GCGATG	2 cut(s)	13, 1047
BtsCI	GGATG	5 cut(s)	648, 1204, 1301, 1407, 2041
BtsIMutI	CAGTG	3 cut(s)	1373, 1537, 2131
BveI	ACCTGC	1 cut(s)	1877
Cac8I	GCNNGC	9 cut(s)	216, 414, 418, 443, 669, 1022, 1182, 1548, 1563
CaiI	CAGNNNCTG	1 cut(s)	2093
CciI	TCATGA	1 cut(s)	1647
CfoI	GCGC	6 cut(s)	192, 387, 441, 1032, 1168, 1219
Cfr13I	GGNCC	7 cut(s)	280, 304, 607, 636, 646, 1145, 1848
Csp6I	GTAC	5 cut(s)	679, 976, 1573, 1957, 1977
CviAII	CATG	7 cut(s)	577, 796, 1021, 1540, 1648, 1799, 2027
CviQI	GTAC	5 cut(s)	679, 976, 1573, 1957, 1977
DinI	GGCGCC	1 cut(s)	1167
DpnI	GATC	9 cut(s)	249, 273, 487, 512, 807, 1272, 1631, 1646, 2049
DpnII	GATC	9 cut(s)	247, 271, 485, 510, 805, 1270, 1629, 1644, 2047
EaeI	YGGCCR	3 cut(s)	432, 1981, 2004
Eam1104I	CTCTTC	2 cut(s)	384, 828
EarI	CTCTTC	2 cut(s)	384, 828
EciI	GGCGGA	2 cut(s)	31, 370
Eco130I	CCWWGG	2 cut(s)	399, 2105
Eco147I	AGGCCT	1 cut(s)	733
Eco31I	GGTCTC	4 cut(s)	234, 258, 279, 324
Eco32I	GATATC	1 cut(s)	1781
Eco47I	GGWCC	4 cut(s)	280, 304, 646, 1848
Eco81I	CCTNAGG	1 cut(s)	735
Eco88I	CYCGRG	1 cut(s)	570
EcoO109I	RGGNCCY	1 cut(s)	1145
EcoRII	CCWGG	3 cut(s)	1318, 1939, 2080
EcoRV	GATATC	1 cut(s)	1781
EcoT14I	CCWWGG	2 cut(s)	399, 2105
EcoT22I	ATGCAT	1 cut(s)	2028
EgeI	GGCGCC	1 cut(s)	1167
EheI	GGCGCC	1 cut(s)	1167
ErhI	CCWWGG	2 cut(s)	399, 2105
FaeI	CATG	7 cut(s)	580, 799, 1024, 1543, 1651, 1802, 2030
FaqI	GGGAC	5 cut(s)	293, 317, 461, 587, 863
FatI	CATG	7 cut(s)	576, 795, 1020, 1539, 1647, 1798, 2026
FauI	CCCGC	3 cut(s)	223, 425, 438
FbaI	TGATCA	2 cut(s)	510, 1629
FokI	GGATG	5 cut(s)	655, 1211, 1308, 1414, 2048
FspBI	CTAG	4 cut(s)	228, 405, 1566, 1868
FspI	TGCGCA	1 cut(s)	1218
GlaI	GCGC	6 cut(s)	191, 386, 440, 1031, 1167, 1218
GsaI	CCCAGC	3 cut(s)	522, 613, 975
GsuI	CTGGAG	4 cut(s)	157, 874, 1302, 1441
HaeII	RGCGCY	1 cut(s)	1169
HapII	CCGG	3 cut(s)	322, 334, 639
HhaI	GCGC	6 cut(s)	192, 387, 441, 1032, 1168, 1219
Hin1I	GRCGYC	1 cut(s)	1166
Hin1II	CATG	7 cut(s)	580, 799, 1024, 1543, 1651, 1802, 2030
Hin6I	GCGC	6 cut(s)	190, 385, 439, 1030, 1166, 1217
HinP1I	GCGC	6 cut(s)	190, 385, 439, 1030, 1166, 1217
HincII	GTYRAC	2 cut(s)	1095, 1729
HindII	GTYRAC	2 cut(s)	1095, 1729
HindIII	AAGCTT	2 cut(s)	665, 827
HinfI	GANTC	9 cut(s)	344, 534, 703, 901, 994, 1009, 1582, 1658, 2073
HpaI	GTTAAC	1 cut(s)	1729
HpaII	CCGG	3 cut(s)	322, 334, 639
HphI	GGTGA	1 cut(s)	1715
Hpy166II	GTNNAC	3 cut(s)	1095, 1729, 1959
Hpy188III	TCNNGA	8 cut(s)	251, 572, 602, 866, 1175, 1648, 2017, 2093
Hpy8I	GTNNAC	3 cut(s)	1095, 1729, 1959
HpyAV	CCTTC	7 cut(s)	204, 645, 961, 996, 1136, 1832, 2061
HpyCH4III	ACNGT	2 cut(s)	961, 1956
HpyF10VI	GCNNNNNNNGC	5 cut(s)	41, 215, 502, 664, 1186
Hsp92I	GRCGYC	1 cut(s)	1166
Hsp92II	CATG	7 cut(s)	580, 799, 1024, 1543, 1651, 1802, 2030
HspAI	GCGC	6 cut(s)	190, 385, 439, 1030, 1166, 1217
KasI	GGCGCC	1 cut(s)	1165
Ksp22I	TGATCA	2 cut(s)	510, 1629
KspAI	GTTAAC	1 cut(s)	1729
Kzo9I	GATC	9 cut(s)	247, 271, 485, 510, 805, 1270, 1629, 1644, 2047
LmnI	GCTCC	7 cut(s)	103, 337, 382, 655, 688, 1555, 1816
Lsp1109I	GCAGC	4 cut(s)	678, 733, 757, 1060
LweI	GCATC	2 cut(s)	1435, 2051
MaeI	CTAG	4 cut(s)	228, 405, 1566, 1868
MaeIII	GTNAC	4 cut(s)	317, 1594, 1786, 1809
MalI	GATC	9 cut(s)	249, 273, 487, 512, 807, 1272, 1631, 1646, 2049
MbiI	CCGCTC	3 cut(s)	352, 445, 1558
MboI	GATC	9 cut(s)	247, 271, 485, 510, 805, 1270, 1629, 1644, 2047
MhlI	GDGCHC	1 cut(s)	418
MlsI	TGGCCA	1 cut(s)	2006
MluNI	TGGCCA	1 cut(s)	2006
Mly113I	GGCGCC	1 cut(s)	1166
MmeI	TCCRAC	2 cut(s)	142, 225
Mox20I	TGGCCA	1 cut(s)	2006
Mph1103I	ATGCAT	1 cut(s)	2028
MroXI	GAANNNNTTC	1 cut(s)	1842
MscI	TGGCCA	1 cut(s)	2006
MseI	TTAA	9 cut(s)	86, 468, 759, 876, 954, 1362, 1679, 1728, 1926
MslI	CAYNNNNRTG	1 cut(s)	1523
Msp20I	TGGCCA	1 cut(s)	2006
MspA1I	CMGCKG	2 cut(s)	14, 746
MspCI	CTTAAG	2 cut(s)	758, 953
MspI	CCGG	3 cut(s)	322, 334, 639
MspR9I	CCNGG	6 cut(s)	323, 335, 640, 1320, 1941, 2082
Mva1269I	GAATGC	4 cut(s)	586, 1138, 1645, 1747
MvaI	CCWGG	3 cut(s)	1320, 1941, 2082
MvnI	CGCG	6 cut(s)	190, 363, 369, 387, 441, 1032
MwoI	GCNNNNNNNGC	5 cut(s)	41, 215, 502, 664, 1186
NarI	GGCGCC	1 cut(s)	1166
NciI	CCSGG	3 cut(s)	323, 335, 640
NdeII	GATC	9 cut(s)	247, 271, 485, 510, 805, 1270, 1629, 1644, 2047
NlaIII	CATG	7 cut(s)	580, 799, 1024, 1543, 1651, 1802, 2030
NlaIV	GGNNCC	4 cut(s)	281, 305, 359, 1167
NmeAIII	GCCGAG	1 cut(s)	460
NmuCI	GTSAC	3 cut(s)	317, 1594, 1809
NsbI	TGCGCA	1 cut(s)	1218
NsiI	ATGCAT	1 cut(s)	2028
NspI	RCATGY	1 cut(s)	1024
PaeI	GCATGC	1 cut(s)	1024
PagI	TCATGA	1 cut(s)	1647
PceI	AGGCCT	1 cut(s)	733
PcsI	WCGNNNNNNNCGW	1 cut(s)	1972
PctI	GAATGC	4 cut(s)	586, 1138, 1645, 1747
PdmI	GAANNNNTTC	1 cut(s)	1842
PfeI	GAWTC	9 cut(s)	344, 534, 703, 901, 994, 1009, 1582, 1658, 2073
PluTI	GGCGCC	1 cut(s)	1169
PshBI	ATTAAT	1 cut(s)	1926
Psp6I	CCWGG	3 cut(s)	1318, 1939, 2080
PspFI	CCCAGC	3 cut(s)	518, 609, 971
PspGI	CCWGG	3 cut(s)	1318, 1939, 2080
PspN4I	GGNNCC	4 cut(s)	281, 305, 359, 1167
PspPI	GGNCC	7 cut(s)	280, 304, 607, 636, 646, 1145, 1848
PstNI	CAGNNNCTG	1 cut(s)	2093
PvuII	CAGCTG	1 cut(s)	14
RsaI	GTAC	5 cut(s)	680, 977, 1574, 1958, 1978
RsaNI	GTAC	5 cut(s)	679, 976, 1573, 1957, 1977
RseI	CAYNNNNRTG	1 cut(s)	1523
SaqAI	TTAA	9 cut(s)	86, 468, 759, 876, 954, 1362, 1679, 1728, 1926
Sau3AI	GATC	9 cut(s)	247, 271, 485, 510, 805, 1270, 1629, 1644, 2047
Sau96I	GGNCC	7 cut(s)	280, 304, 607, 636, 646, 1145, 1848
ScaI	AGTACT	1 cut(s)	1574
ScrFI	CCNGG	6 cut(s)	323, 335, 640, 1320, 1941, 2082
SduI	GDGCHC	1 cut(s)	418
SfaNI	GCATC	2 cut(s)	1435, 2051
SfoI	GGCGCC	1 cut(s)	1167
SinI	GGWCC	4 cut(s)	280, 304, 646, 1848
SmiMI	CAYNNNNRTG	1 cut(s)	1523
SmlI	CTYRAG	3 cut(s)	758, 953, 1576
SmoI	CTYRAG	3 cut(s)	758, 953, 1576
SpeI	ACTAGT	1 cut(s)	227
SphI	GCATGC	1 cut(s)	1024
SseBI	AGGCCT	1 cut(s)	733
SspDI	GGCGCC	1 cut(s)	1165
SspMI	CTAG	4 cut(s)	228, 405, 1566, 1868
StuI	AGGCCT	1 cut(s)	733
StyD4I	CCNGG	6 cut(s)	321, 333, 638, 1318, 1939, 2080
StyI	CCWWGG	2 cut(s)	399, 2105
TaaI	ACNGT	2 cut(s)	961, 1956
TaqII	GACCGA	8 cut(s)	252, 282, 297, 303, 321, 387, 663, 1892
TatI	WGTACW	2 cut(s)	1572, 1956
TauI	GCSGC	9 cut(s)	35, 67, 126, 355, 746, 1007, 1139, 1546, 1561
TfiI	GAWTC	9 cut(s)	344, 534, 703, 901, 994, 1009, 1582, 1658, 2073
Tru1I	TTAA	9 cut(s)	86, 468, 759, 876, 954, 1362, 1679, 1728, 1926
Tru9I	TTAA	9 cut(s)	86, 468, 759, 876, 954, 1362, 1679, 1728, 1926
TscAI	CASTG	2 cut(s)	1373, 1537
TseFI	GTSAC	3 cut(s)	317, 1594, 1809
TseI	GCWGC	4 cut(s)	691, 746, 770, 1073
Tsp45I	GTSAC	3 cut(s)	317, 1594, 1809
TspDTI	ATGAA	2 cut(s)	17, 593
TspGWI	ACGGA	1 cut(s)	2048
TspRI	CASTG	2 cut(s)	1373, 1537
Vha464I	CTTAAG	2 cut(s)	758, 953
VpaK11BI	GGWCC	4 cut(s)	280, 304, 646, 1848
VspI	ATTAAT	1 cut(s)	1926
XapI	RAATTY	1 cut(s)	1667
XceI	RCATGY	1 cut(s)	1024
XcmI	CCANNNNNNNNNTGG	2 cut(s)	617, 918
XmnI	GAANNNNTTC	1 cut(s)	1842
XspI	CTAG	4 cut(s)	228, 405, 1566, 1868
ZrmI	AGTACT	1 cut(s)	1574
Zsp2I	ATGCAT	1 cut(s)	2028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.