Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0002950

Physical Location & Seq

Genomic Coordinates Forward (+)

2645500 .. 2648266

Gene Structure 2767 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G029000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGAAACGCTTAGCAGATAGCGTTCCCGTAGCACCCTCCTCCTCCTCGTTGCCGCCCAAAAAACCCGTTTTCTTGACGAAAGCCCAACGCGAGCAGTTAGCCCTCCAACGCCGTCAAGAAGAAACCGAAGACCAGAAACGCCGTCAAAGTCATGTTCTCTCCAATCTCTCCCATTCCCGCCCTTCCTCCGACGCCGCACCACCCACAGCCACCGCCAATTCCGACCGGGACAGGGACCGGGACCGGGACCGAGACCGAGACAGAGACAGAGACAGAGATCGAGATCATAGGGACCGAGACAGGGACCGATATTCCCGAGACAGAGACCGGGAACGAGATTCGGAGCGGCGAAACCGCGACCGCGACCGAGATAGGGAGCGGGAGGAGGAGGCCAAGGTTCGAGAGCGTGCCCGCTTGGACAAATTAGCAGAGCGCGAGCGAGACAAAGAGCTGGACGCCATTAAAGAGCAGTATCTCGGATCGAAGAAGCCGAAGAAGCGGGTCATCAAGCCCAGCGAGAAGTTTCGGTTCTCTTTCGATTGGGAGAACACGGAGGACACTTCTCGGGATATGAATGCTTTGTATCAAAACCCTCACGAGGCCCAGCTCTTGTTTGGGCGAGGTTTTCGGGCTGGGATGGACCGGAGGGAGCAGAAGAAGCTGGCTGTGAAGTACGAGAGGGAGCTGAGGGAGGAGATCCGGAAGAAGGAGGGCGTAGAGGAGAAGCCCGAGGAGGCCATGGCGCAGAAGCTCAAGGAGGAGGCTGCAGAATTATACGATACTTTTGACATGAGGGTCGATCGCCATTGGACTGATAAGAAGCTTGAAGAGATGACTGAGAGGGATTGGAGGATTTTTCGGGAGGATTTCAATATTTCATATAAAGGGTCGAGGATTCCGAGGCCTATGAGGAGTTGGGCAGAGAGTAGATTGAGTGAGGAGTTGCTCAAGGCTGTGGAGAGAGCTGGTTACAAGAAGCCTTCTCCGATTCAGATGGCGGCGATTCCACTTGGGCTGCAACAGCGCGATGTTATTGGCATTGCTGAGACTGGTTCGGGTAAGACTGCTGCCTTTGTTCTTCCTATGTTGACTTATATTTCGAGGTTGCCTCCCATTAGTGAGGAGAATGAGGCCGAAGGACCGTATGCTGTTGTTATGGCGCCTACTCGTGAGCTTGCACAGCAGATTGAGGATGAGACTGTCAAGTTTGCGCATTTCTTGGGTATCAAAGTGGTTTCCATTGTTGGTGGGCAGTCGATTGAGGAGCAAGGGTTTAGAATTAGGCAAGGCTGTGAGGTTGTAATTGCCACTCCGGGGCGTTTGATTGATTGCCTGGAGAGGCGTTATGCTGTTCTCAACCAGTGCAATTATGTTGTTCTTGATGAAGCTGATAGGATGATTGATATGGGGTTTGAGCCGCAGGTTGTAGGTGTCTTAGATGCAATGCCTTCCAGCAATTTCAAACCTGAGAATGAGGACGAAGAGCTTGATGAGAAGAAGATTTACAGAACCACGTATATGTTCAGTGCCACAATGCCGCCTGCTGTAGAGCGGCTTGCTAGGAAGTACTTGAGGAATCCTGTTGTGGTCACGATTGGCACGGCTGGAAAGACAACTGATTTGATCACTCAGAATGTGATCATGAGCAAGGAATCTGAGAAGTTTGAGAGGTTAAAGAGGTTGCTTGATGAACTTGGTGATAAGACTGCTATTGTGTTCGTTAATACCAAGAAGAATGCAGACTATGTCGCTAAGAGTTTGGATAAGAATGGATATCGTGTGACCACTTTGCATGGGGGTAAGTCACAGGAGCAGAGAGAAATTAGCCTTGACGGTTTTCGAGCCAAGAAATACAATGTCCTTGTTGCAACTGATGTTGCAGGACGTGGGATTGACATACCTGATGTGGCCTATGTTATTAATTATGATATGCCTGGGAATATTGAACAGTACACGCATCGTATTGGACGTACTGGACGTGCAGGGAAGACTGGTGTGGCCACAACATTTTTGACTATGCACGACACCGAAGTCTTTTATGATCTCAAGCAGATGCTCATTCAGAGTAATAGTCATGTTCCTCCTGAACTGGCAAAACATGAGGCCTCAAAGTTCAAACCCGGTTCAGTTCCTGATAGACCACCTAGGCGTAATGACACTATTTTTACTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

725

Amino Acids

83.77

Weight (kDa)

8.75

Isoelectric Point (pI)

44.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28180 AT1G28180 AT2G33730
fragaria_vesca	FvH4_1g07870 FvH4_2g13750
malus_domestica	MD05G1025300.v1.1 MD10G1025500.v1.1
prunus_persica	Prupe.8G029000_v2.0.a1 Prupe.8G029000_v2.0.a1
pyrus_communis	pycom05g01650 pycom10g01680
rosa_chinensis	RchiOBHm_Chr1g0333041 RchiOBHm_Chr2g0093751 RchiOBHm_Chr2g0093761 RchiOBHm_Chr6g0275441
rosa_laevigata	RLG00000013755 RLG00000016434
rosa_multiflora	Rmu_sc0004143.1_g000018 Rmu_sc0021925.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237200 Rroxscaffold_7G00193300
rosa_rugosa	Rorug02G0039500 Rorug06G0092300 Rorug06G0092400 Rorug07G0206900
rosa_samantha	Rh1AG129900 Rh1CG123700 Rh1DG135400 Rh2BG086300 Rh2CG088700 Rh2DG084300 Rh2DG084400 Rh6AG205700 Rh6CG210900 Rh6DG201100 Rh7BG338800
rosa_wichuraiana	Rw1G010290 Rw6G017840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	794, 2030
Acc16I	TGCGCA	1 cut(s)	1212
Acc36I	ACCTGC	1 cut(s)	1411
AccB1I	GGYRCC	1 cut(s)	1159
AccBSI	CCGCTC	3 cut(s)	346, 379, 1552
AccII	CGCG	5 cut(s)	90, 357, 363, 435, 1026
AccIII	TCCGGA	1 cut(s)	699
AclWI	GGATC	2 cut(s)	487, 691
AcoI	YGGCCR	1 cut(s)	1998
AcyI	GRCGYC	3 cut(s)	192, 456, 1160
AfaI	GTAC	4 cut(s)	674, 1568, 1952, 1972
AfiI	CCNNNNNNNGG	7 cut(s)	232, 244, 301, 373, 598, 706, 1314
AgsI	TTSAA	5 cut(s)	827, 871, 1462, 1946, 2116
AjiI	CACGTC	2 cut(s)	1886, 1979
AjnI	CCWGG	2 cut(s)	1332, 1933
AlwI	GGATC	2 cut(s)	487, 691
AlwNI	CAGNNNCTG	1 cut(s)	2132
Ama87I	CYCGRG	3 cut(s)	315, 564, 728
Aor13HI	TCCGGA	1 cut(s)	699
AoxI	GGCC	8 cut(s)	390, 600, 735, 902, 1131, 1908, 1998, 2103
ApeKI	GCWGC	3 cut(s)	764, 1015, 1067
ArsI	GACNNNNNNTTYG	4 cut(s)	1081, 1113, 1603, 1635
AseI	ATTAAT	1 cut(s)	1920
AspA2I	CCTAGG	1 cut(s)	2144
AspLEI	GCGC	5 cut(s)	435, 745, 1026, 1162, 1213
AspS9I	GGNCC	8 cut(s)	235, 241, 247, 292, 304, 601, 640, 1139
AsuC2I	CCSGG	6 cut(s)	227, 239, 245, 329, 1314, 2121
AsuHPI	GGTGA	1 cut(s)	1709
AvaI	CYCGRG	3 cut(s)	315, 564, 728
AvaII	GGWCC	7 cut(s)	235, 241, 247, 292, 304, 640, 1139
AvrII	CCTAGG	1 cut(s)	2144
BaeGI	GKGCMC	1 cut(s)	412
BalI	TGGCCA	1 cut(s)	2000
BanI	GGYRCC	1 cut(s)	1159
BarI	GAAGNNNNNNTAC	2 cut(s)	1487, 1519
BauI	CACGAG	2 cut(s)	596, 1167
BbsI	GAAGAC	2 cut(s)	135, 1994
BbvCI	CCTCAGC	1 cut(s)	686
BbvI	GCAGC	3 cut(s)	751, 1002, 1054
BccI	CCATC	2 cut(s)	631, 988
BceAI	ACGGC	3 cut(s)	96, 126, 1617
BciT130I	CCWGG	2 cut(s)	1334, 1935
BclI	TGATCA	2 cut(s)	1623, 1638
BcnI	CCSGG	6 cut(s)	227, 239, 245, 329, 1314, 2121
BfaI	CTAG	2 cut(s)	1560, 2145
BfmI	CTRYAG	2 cut(s)	765, 1545
BfoI	RGCGCY	1 cut(s)	1163
BfuAI	ACCTGC	1 cut(s)	1411
BlnI	CCTAGG	1 cut(s)	2144
BlpI	GCTNAGC	1 cut(s)	10
BmcAI	AGTACT	1 cut(s)	1568
Bme1390I	CCNGG	8 cut(s)	227, 239, 245, 329, 1314, 1334, 1935, 2121
Bme18I	GGWCC	7 cut(s)	235, 241, 247, 292, 304, 640, 1139
BmeT110I	CYCGRG	3 cut(s)	315, 564, 728
BmgBI	CACGTC	2 cut(s)	1886, 1979
BmgT120I	GGNCC	8 cut(s)	235, 241, 247, 292, 304, 601, 640, 1139
BmiI	GGNNCC	6 cut(s)	236, 242, 248, 293, 305, 1161
BmrFI	CCNGG	8 cut(s)	227, 239, 245, 329, 1314, 1334, 1935, 2121
BmsI	GCATC	3 cut(s)	1429, 1966, 2043
BpiI	GAAGAC	2 cut(s)	135, 1994
BplI	GAGNNNNNCTC	2 cut(s)	1093, 1125
BpmI	CTGGAG	1 cut(s)	1355
Bpu10I	CCTNAGC	1 cut(s)	686
Bpu1102I	GCTNAGC	1 cut(s)	10
BpuEI	CTTGAG	4 cut(s)	737, 932, 1591, 2030
BpuMI	CCSGG	6 cut(s)	227, 239, 245, 329, 1314, 2121
BsaAI	YACGTR	1 cut(s)	1515
BsaBI	GATNNNNATC	1 cut(s)	282
BsaHI	GRCGYC	3 cut(s)	192, 456, 1160
BsaI	GGTCTC	2 cut(s)	246, 318
BsaJI	CCNNGG	7 cut(s)	393, 729, 738, 899, 1313, 1934, 2144
BsaWI	WCCGGW	2 cut(s)	642, 699
BsaXI	ACNNNNNCTCC	2 cut(s)	1256, 1286
Bsc4I	CCNNNNNNNGG	7 cut(s)	232, 244, 301, 373, 598, 706, 1314
Bse1I	ACTGG	5 cut(s)	1054, 1360, 1978, 1996, 2094
Bse3DI	GCAATG	2 cut(s)	1038, 1449
Bse8I	GATNNNNATC	1 cut(s)	282
BseAI	TCCGGA	1 cut(s)	699
BseBI	CCWGG	2 cut(s)	1334, 1935
BseDI	CCNNGG	7 cut(s)	393, 729, 738, 899, 1313, 1934, 2144
BseGI	GGATG	3 cut(s)	642, 1198, 1401
BseJI	GATNNNNATC	1 cut(s)	282
BseLI	CCNNNNNNNGG	7 cut(s)	232, 244, 301, 373, 598, 706, 1314
BseMI	GCAATG	2 cut(s)	1038, 1449
BseMII	CTCAG	6 cut(s)	677, 828, 1035, 1458, 1643, 1647
BseNI	ACTGG	5 cut(s)	1054, 1360, 1978, 1996, 2094
BseSI	GKGCMC	1 cut(s)	412
BseXI	GCAGC	3 cut(s)	751, 1002, 1054
BseYI	CCCAGC	3 cut(s)	512, 603, 632
BsgI	GTGCAG	1 cut(s)	2001
Bsh1236I	CGCG	5 cut(s)	90, 357, 363, 435, 1026
Bsh1285I	CGRYCG	4 cut(s)	226, 361, 367, 802
BshFI	GGCC	8 cut(s)	392, 602, 737, 904, 1133, 1910, 2000, 2105
BshNI	GGYRCC	1 cut(s)	1159
BsiEI	CGRYCG	4 cut(s)	226, 361, 367, 802
BsiHKCI	CYCGRG	3 cut(s)	315, 564, 728
BsiSI	CCGG	8 cut(s)	226, 238, 244, 328, 643, 700, 1313, 2121
BslFI	GGGAC	6 cut(s)	242, 248, 254, 260, 305, 317
BslI	CCNNNNNNNGG	7 cut(s)	232, 244, 301, 373, 598, 706, 1314
BsmFI	GGGAC	6 cut(s)	242, 248, 254, 260, 305, 317
BsmI	GAATGC	2 cut(s)	580, 1741
BsnI	GGCC	8 cut(s)	392, 602, 737, 904, 1133, 1910, 2000, 2105
Bso31I	GGTCTC	2 cut(s)	246, 318
BsoBI	CYCGRG	3 cut(s)	315, 564, 728
Bsp1286I	GDGCHC	1 cut(s)	412
Bsp13I	TCCGGA	1 cut(s)	699
Bsp143I	GATC	8 cut(s)	277, 283, 479, 696, 799, 1623, 1638, 2041
Bsp1720I	GCTNAGC	1 cut(s)	10
Bsp19I	CCATGG	1 cut(s)	738
BspANI	GGCC	8 cut(s)	392, 602, 737, 904, 1133, 1910, 2000, 2105
BspCNI	CTCAG	6 cut(s)	678, 829, 1036, 1459, 1642, 1648
BspEI	TCCGGA	1 cut(s)	699
BspFNI	CGCG	5 cut(s)	90, 357, 363, 435, 1026
BspHI	TCATGA	1 cut(s)	1641
BspLI	GGNNCC	6 cut(s)	236, 242, 248, 293, 305, 1161
BspMAI	CTGCAG	1 cut(s)	769
BspMI	ACCTGC	1 cut(s)	1411
BspPI	GGATC	2 cut(s)	487, 691
BspQI	GCTCTTC	1 cut(s)	1476
BspT107I	GGYRCC	1 cut(s)	1159
BspTNI	GGTCTC	2 cut(s)	246, 318
BsrBI	CCGCTC	3 cut(s)	346, 379, 1552
BsrDI	GCAATG	2 cut(s)	1038, 1449
BsrI	ACTGG	5 cut(s)	1054, 1360, 1978, 1996, 2094
BssECI	CCNNGG	7 cut(s)	393, 729, 738, 899, 1313, 1934, 2144
BssMI	GATC	8 cut(s)	277, 283, 479, 696, 799, 1623, 1638, 2041
BssNI	GRCGYC	3 cut(s)	192, 456, 1160
BssSI	CACGAG	2 cut(s)	596, 1167
BssT1I	CCWWGG	3 cut(s)	393, 738, 2144
Bst2BI	CACGAG	2 cut(s)	596, 1167
Bst2UI	CCWGG	2 cut(s)	1334, 1935
Bst4CI	ACNGT	4 cut(s)	1143, 1201, 1835, 1950
Bst6I	CTCTTC	2 cut(s)	822, 1476
BstACI	GRCGYC	3 cut(s)	192, 456, 1160
BstBAI	YACGTR	1 cut(s)	1515
BstC8I	GCNNGC	8 cut(s)	92, 408, 412, 437, 663, 1176, 1542, 1557
BstDEI	CTNAG	9 cut(s)	10, 686, 837, 1044, 1435, 1467, 1629, 1656, 1752
BstDSI	CCRYGG	1 cut(s)	738
BstF5I	GGATG	3 cut(s)	642, 1198, 1401
BstFNI	CGCG	5 cut(s)	90, 357, 363, 435, 1026
BstH2I	RGCGCY	1 cut(s)	1163
BstHHI	GCGC	5 cut(s)	435, 745, 1026, 1162, 1213
BstKTI	GATC	8 cut(s)	280, 286, 482, 699, 802, 1626, 1641, 2044
BstMBI	GATC	8 cut(s)	277, 283, 479, 696, 799, 1623, 1638, 2041
BstMCI	CGRYCG	4 cut(s)	226, 361, 367, 802
BstMWI	GCNNNNNNNGC	4 cut(s)	496, 658, 1021, 1180
BstNI	CCWGG	2 cut(s)	1334, 1935
BstSCI	CCNGG	8 cut(s)	225, 237, 243, 327, 1312, 1332, 1933, 2119
BstSFI	CTRYAG	2 cut(s)	765, 1545
BstSLI	GKGCMC	1 cut(s)	412
BstUI	CGCG	5 cut(s)	90, 357, 363, 435, 1026
BstV1I	GCAGC	3 cut(s)	751, 1002, 1054
BstV2I	GAAGAC	2 cut(s)	135, 1994
BstX2I	RGATCY	1 cut(s)	696
BstYI	RGATCY	1 cut(s)	696
BsuRI	GGCC	8 cut(s)	392, 602, 737, 904, 1133, 1910, 2000, 2105
BtgI	CCRYGG	1 cut(s)	738
BtgZI	GCGATG	1 cut(s)	1041
BtrI	CACGTC	2 cut(s)	1886, 1979
BtsCI	GGATG	3 cut(s)	642, 1198, 1401
BtsIMutI	CAGTG	2 cut(s)	1367, 1531
BveI	ACCTGC	1 cut(s)	1411
Cac8I	GCNNGC	8 cut(s)	92, 408, 412, 437, 663, 1176, 1542, 1557
CaiI	CAGNNNCTG	1 cut(s)	2132
CciI	TCATGA	1 cut(s)	1641
CfoI	GCGC	5 cut(s)	435, 745, 1026, 1162, 1213
Cfr13I	GGNCC	8 cut(s)	235, 241, 247, 292, 304, 601, 640, 1139
CseI	GACGC	2 cut(s)	200, 464
Csp6I	GTAC	4 cut(s)	673, 1567, 1951, 1971
CviAII	CATG	7 cut(s)	152, 739, 790, 1642, 1793, 2075, 2099
CviQI	GTAC	4 cut(s)	673, 1567, 1951, 1971
DdeI	CTNAG	9 cut(s)	10, 686, 837, 1044, 1435, 1467, 1629, 1656, 1752
DinI	GGCGCC	1 cut(s)	1161
DpnI	GATC	8 cut(s)	279, 285, 481, 698, 801, 1625, 1640, 2043
DpnII	GATC	8 cut(s)	277, 283, 479, 696, 799, 1623, 1638, 2041
DrdI	GACNNNNNNGTC	2 cut(s)	794, 2030
DseDI	GACNNNNNNGTC	2 cut(s)	794, 2030
EaeI	YGGCCR	1 cut(s)	1998
Eam1104I	CTCTTC	2 cut(s)	822, 1476
EarI	CTCTTC	2 cut(s)	822, 1476
Eco130I	CCWWGG	3 cut(s)	393, 738, 2144
Eco147I	AGGCCT	2 cut(s)	904, 2105
Eco31I	GGTCTC	2 cut(s)	246, 318
Eco32I	GATATC	1 cut(s)	1775
Eco47I	GGWCC	7 cut(s)	235, 241, 247, 292, 304, 640, 1139
Eco88I	CYCGRG	3 cut(s)	315, 564, 728
EcoRII	CCWGG	2 cut(s)	1332, 1933
EcoRV	GATATC	1 cut(s)	1775
EcoT14I	CCWWGG	3 cut(s)	393, 738, 2144
EgeI	GGCGCC	1 cut(s)	1161
EheI	GGCGCC	1 cut(s)	1161
ErhI	CCWWGG	3 cut(s)	393, 738, 2144
FaeI	CATG	7 cut(s)	155, 742, 793, 1645, 1796, 2078, 2102
FaqI	GGGAC	6 cut(s)	242, 248, 254, 260, 305, 317
FatI	CATG	7 cut(s)	151, 738, 789, 1641, 1792, 2074, 2098
FauI	CCCGC	4 cut(s)	185, 372, 419, 492
FbaI	TGATCA	2 cut(s)	1623, 1638
FokI	GGATG	3 cut(s)	649, 1205, 1408
FspBI	CTAG	2 cut(s)	1560, 2145
FspI	TGCGCA	1 cut(s)	1212
GlaI	GCGC	5 cut(s)	434, 744, 1025, 1161, 1212
GsaI	CCCAGC	3 cut(s)	516, 607, 636
GsuI	CTGGAG	1 cut(s)	1355
HaeII	RGCGCY	1 cut(s)	1163
HaeIII	GGCC	8 cut(s)	392, 602, 737, 904, 1133, 1910, 2000, 2105
HapII	CCGG	8 cut(s)	226, 238, 244, 328, 643, 700, 1313, 2121
HgaI	GACGC	2 cut(s)	200, 464
HhaI	GCGC	5 cut(s)	435, 745, 1026, 1162, 1213
Hin1I	GRCGYC	3 cut(s)	192, 456, 1160
Hin1II	CATG	7 cut(s)	155, 742, 793, 1645, 1796, 2078, 2102
Hin6I	GCGC	5 cut(s)	433, 743, 1024, 1160, 1211
HinP1I	GCGC	5 cut(s)	433, 743, 1024, 1160, 1211
HincII	GTYRAC	1 cut(s)	1089
HindII	GTYRAC	1 cut(s)	1089
HindIII	AAGCTT	1 cut(s)	821
HinfI	GANTC	6 cut(s)	338, 895, 988, 1003, 1576, 1652
HpaII	CCGG	8 cut(s)	226, 238, 244, 328, 643, 700, 1313, 2121
HphI	GGTGA	1 cut(s)	1709
Hpy166II	GTNNAC	2 cut(s)	1089, 1953
Hpy8I	GTNNAC	2 cut(s)	1089, 1953
Hpy99I	CGWCG	1 cut(s)	194
HpyAV	CCTTC	5 cut(s)	192, 700, 990, 1130, 1458
HpyCH4III	ACNGT	4 cut(s)	1143, 1201, 1835, 1950
HpyCH4IV	ACGT	4 cut(s)	1514, 1885, 1969, 1978
HpyF10VI	GCNNNNNNNGC	4 cut(s)	496, 658, 1021, 1180
HpyF3I	CTNAG	9 cut(s)	10, 686, 837, 1044, 1435, 1467, 1629, 1656, 1752
HpySE526I	ACGT	4 cut(s)	1514, 1885, 1969, 1978
Hsp92I	GRCGYC	3 cut(s)	192, 456, 1160
Hsp92II	CATG	7 cut(s)	155, 742, 793, 1645, 1796, 2078, 2102
HspAI	GCGC	5 cut(s)	433, 743, 1024, 1160, 1211
KasI	GGCGCC	1 cut(s)	1159
Kpn2I	TCCGGA	1 cut(s)	699
Ksp22I	TGATCA	2 cut(s)	1623, 1638
Kzo9I	GATC	8 cut(s)	277, 283, 479, 696, 799, 1623, 1638, 2041
LguI	GCTCTTC	1 cut(s)	1476
LmnI	GCTCC	6 cut(s)	343, 376, 649, 682, 1264, 1810
Lsp1109I	GCAGC	3 cut(s)	751, 1002, 1054
LweI	GCATC	3 cut(s)	1429, 1966, 2043
MaeI	CTAG	2 cut(s)	1560, 2145
MaeII	ACGT	4 cut(s)	1514, 1885, 1969, 1978
MaeIII	GTNAC	4 cut(s)	968, 1588, 1780, 1803
MalI	GATC	8 cut(s)	279, 285, 481, 698, 801, 1625, 1640, 2043
MbiI	CCGCTC	3 cut(s)	346, 379, 1552
MboI	GATC	8 cut(s)	277, 283, 479, 696, 799, 1623, 1638, 2041
MflI	RGATCY	1 cut(s)	696
MhlI	GDGCHC	1 cut(s)	412
MlsI	TGGCCA	1 cut(s)	2000
MluCI	AATT	9 cut(s)	217, 422, 770, 1278, 1302, 1366, 1456, 1821, 1921
MluNI	TGGCCA	1 cut(s)	2000
Mly113I	GGCGCC	1 cut(s)	1160
MmeI	TCCRAC	3 cut(s)	130, 213, 246
Mox20I	TGGCCA	1 cut(s)	2000
MroI	TCCGGA	1 cut(s)	699
MscI	TGGCCA	1 cut(s)	2000
MseI	TTAA	4 cut(s)	462, 1673, 1722, 1920
MslI	CAYNNNNRTG	1 cut(s)	1517
Msp20I	TGGCCA	1 cut(s)	2000
MspI	CCGG	8 cut(s)	226, 238, 244, 328, 643, 700, 1313, 2121
MspR9I	CCNGG	8 cut(s)	227, 239, 245, 329, 1314, 1334, 1935, 2121
Mva1269I	GAATGC	2 cut(s)	580, 1741
MvaI	CCWGG	2 cut(s)	1334, 1935
MvnI	CGCG	5 cut(s)	90, 357, 363, 435, 1026
MwoI	GCNNNNNNNGC	4 cut(s)	496, 658, 1021, 1180
NarI	GGCGCC	1 cut(s)	1160
NciI	CCSGG	6 cut(s)	227, 239, 245, 329, 1314, 2121
NcoI	CCATGG	1 cut(s)	738
NdeII	GATC	8 cut(s)	277, 283, 479, 696, 799, 1623, 1638, 2041
NlaIII	CATG	7 cut(s)	155, 742, 793, 1645, 1796, 2078, 2102
NlaIV	GGNNCC	6 cut(s)	236, 242, 248, 293, 305, 1161
NmuCI	GTSAC	3 cut(s)	1588, 1780, 1803
NsbI	TGCGCA	1 cut(s)	1212
PagI	TCATGA	1 cut(s)	1641
PceI	AGGCCT	2 cut(s)	904, 2105
PciSI	GCTCTTC	1 cut(s)	1476
PcsI	WCGNNNNNNNCGW	4 cut(s)	488, 896, 1966, 1975
PctI	GAATGC	2 cut(s)	580, 1741
PfeI	GAWTC	6 cut(s)	338, 895, 988, 1003, 1576, 1652
PflFI	GACNNNGTC	1 cut(s)	1745
Ple19I	CGATCG	1 cut(s)	802
PluTI	GGCGCC	1 cut(s)	1163
Ppu21I	YACGTR	1 cut(s)	1515
PshBI	ATTAAT	1 cut(s)	1920
Psp6I	CCWGG	2 cut(s)	1332, 1933
PspFI	CCCAGC	3 cut(s)	512, 603, 632
PspGI	CCWGG	2 cut(s)	1332, 1933
PspN4I	GGNNCC	6 cut(s)	236, 242, 248, 293, 305, 1161
PspPI	GGNCC	8 cut(s)	235, 241, 247, 292, 304, 601, 640, 1139
PstI	CTGCAG	1 cut(s)	769
PstNI	CAGNNNCTG	1 cut(s)	2132
PsuI	RGATCY	1 cut(s)	696
PsyI	GACNNNGTC	1 cut(s)	1745
PvuI	CGATCG	1 cut(s)	802
RsaI	GTAC	4 cut(s)	674, 1568, 1952, 1972
RsaNI	GTAC	4 cut(s)	673, 1567, 1951, 1971
RseI	CAYNNNNRTG	1 cut(s)	1517
SapI	GCTCTTC	1 cut(s)	1476
SaqAI	TTAA	4 cut(s)	462, 1673, 1722, 1920
Sau3AI	GATC	8 cut(s)	277, 283, 479, 696, 799, 1623, 1638, 2041
Sau96I	GGNCC	8 cut(s)	235, 241, 247, 292, 304, 601, 640, 1139
ScaI	AGTACT	1 cut(s)	1568
ScrFI	CCNGG	8 cut(s)	227, 239, 245, 329, 1314, 1334, 1935, 2121
SduI	GDGCHC	1 cut(s)	412
SfaNI	GCATC	3 cut(s)	1429, 1966, 2043
SfcI	CTRYAG	2 cut(s)	765, 1545
SfoI	GGCGCC	1 cut(s)	1161
SinI	GGWCC	7 cut(s)	235, 241, 247, 292, 304, 640, 1139
SmiMI	CAYNNNNRTG	1 cut(s)	1517
SmlI	CTYRAG	4 cut(s)	752, 947, 1570, 2045
SmoI	CTYRAG	4 cut(s)	752, 947, 1570, 2045
Sse9I	AATT	9 cut(s)	217, 422, 770, 1278, 1302, 1366, 1456, 1821, 1921
SseBI	AGGCCT	2 cut(s)	904, 2105
SspDI	GGCGCC	1 cut(s)	1159
SspI	AATATT	2 cut(s)	874, 1942
SspMI	CTAG	2 cut(s)	1560, 2145
StuI	AGGCCT	2 cut(s)	904, 2105
StyD4I	CCNGG	8 cut(s)	225, 237, 243, 327, 1312, 1332, 1933, 2119
StyI	CCWWGG	3 cut(s)	393, 738, 2144
TaaI	ACNGT	4 cut(s)	1143, 1201, 1835, 1950
TaiI	ACGT	4 cut(s)	1517, 1888, 1972, 1981
TaqI	TCGA	9 cut(s)	280, 400, 482, 537, 798, 890, 1100, 1256, 1840
TaqII	GACCGA	5 cut(s)	264, 270, 309, 321, 381
TasI	AATT	9 cut(s)	217, 422, 770, 1278, 1302, 1366, 1456, 1821, 1921
TatI	WGTACW	2 cut(s)	1566, 1950
TauI	GCSGC	7 cut(s)	55, 197, 349, 1001, 1420, 1540, 1555
TfiI	GAWTC	6 cut(s)	338, 895, 988, 1003, 1576, 1652
Tru1I	TTAA	4 cut(s)	462, 1673, 1722, 1920
Tru9I	TTAA	4 cut(s)	462, 1673, 1722, 1920
TscAI	CASTG	2 cut(s)	1367, 1531
TseFI	GTSAC	3 cut(s)	1588, 1780, 1803
TseI	GCWGC	3 cut(s)	764, 1015, 1067
Tsp45I	GTSAC	3 cut(s)	1588, 1780, 1803
TspDTI	ATGAA	5 cut(s)	17, 587, 867, 1398, 1704
TspGWI	ACGGA	1 cut(s)	566
TspRI	CASTG	2 cut(s)	1367, 1531
Tth111I	GACNNNGTC	1 cut(s)	1745
VpaK11BI	GGWCC	7 cut(s)	235, 241, 247, 292, 304, 640, 1139
VspI	ATTAAT	1 cut(s)	1920
XcmI	CCANNNNNNNNNTGG	1 cut(s)	611
XmaJI	CCTAGG	1 cut(s)	2144
XspI	CTAG	2 cut(s)	1560, 2145
ZrmI	AGTACT	1 cut(s)	1568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.