Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0002950

Physical Location & Seq

Genomic Coordinates Forward (+)

35368703 .. 35372789

Gene Structure 4087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG338800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGAAACGCTCCGTCGATGGTGTCGCCGCCATCTCTTCGTCGTTGCCGCCGAAGAAACCTGTCTTCTTAACCAAAGGCGAACGCGAGAAGTTAGCTCTCCAACGCCGCCAAGAAGAACACGAGGAACAGAAACGCCGCCAGCACCAGCTTCTCTCCAATCTCCGCTCTTCCTCCGATTCCGTCCCCAACAACTCCAATTCCAATTCGGACCGGGACCGGGACCGGGATCGCGATAGGGACCGGGACCGCGACCGATACTCCCGAAGCGATCGAGACCGTGAGCGTGAATTGGAGCGGCGCAACCGTGACCGTGACCGTGACAACCGTGAGAGGGAGCGCGAAGAGGAGGCCAAGGCCCGAGAGCGTGCTCGATTGGACAAATTAGCGGACCGCGAGCGTGATAAGGAGCTTGACGCAATCAAAGAGCAGTATCTGGGCTCGAAGAAGCCGAAGAAGCGTGTTATTAAACCTAGCGAGAAGTTCCGATTCTCTTTCGATTGGGAGAATACAGAGGACACTTCGCGTGATATGAATGCTTTGTACCAAAACCCTCACGAGGCACAGCTCCTGTTTGGGAGAGGGTTTCGTGCCGGAATGGACCGCCGGGAGCAGAAGAAGCTTGCGGTGAAGCAGGAGAGGGAGCTTAGGGATGAGATTCGGAAGAAGGACGGCGTGGAGGAGAGGCCCGAGGAGGCTGCGGCGCAGAGGCTCAAGGAGGAGGCTGCTGAGCTATATGATACTTTTGATATGAGAGTGGATCGGCATTGGACTGATAAGAAGCTGGAGGAGATGACTGAGAGGGACTGGAGGATATTCCGAGAAGACTTCAATATATCCTACAAAGGGTCTAGGATTCCTCGCCCTATGAGGAGTTGGGTTGAGAGTAGATTGAGTACGGAGCTGCTCAAGGCTGTGGAGAGGGCTGGTTATAAGAAGCCTTCTCCCATTCAGATGGCTGCCATTCCTCTGGGCCTGCAACAGCGTGATGTTATCGGCATTGCAGAGACTGGTTCTGGTAAGACTGCTGCCTTTGTTCTTCCTATGTTGACCTATATTTCTAGGTTGCCTCCTATTAGTGAGGAGAATGAGGCTGAAGGTCCTTATGCTGTTGTCATGGCACCTACTCGTGAGCTTGCGCAGCAGATTGAGGAAGAGACTGTCAAGTTTGCGCATTACTTGGGTATTAAAGTGGTTTCTATTGTTGGTGGGCAGTCAATTGAAGAACAGGGTTTTAAAATTAGGCAAGGATGTGAGGTTGTTATTGCTACGCCAGGGCGGTTGATTGATTGTTTGGAGAGGCGTTATGCTGTTTTGAATCAGTGCAATTATGTTGTTCTTGATGAGGCTGATAGGATGATTGATATGGGGTTTGAGCCGCAGGTTATAGGTGTTTTGGATGCAATGCCTTCCAGCAATTTCAAACCTGAGAATGAGGATGAAGAGCTTGATGACAAGAAGATTTACAGAACCACTTATATGTTTAGTGCGACCATGCCTCCTGCGGTGGAGCGCCTTGCTCGGAAGTATTTGAGGAATCCTGTTGTGGTTACAATTGGCACAGCTGGAAAGACTACTGATTTGATCACTCAGAATGTGGTCTGGAGTAAGGATGCAGAGAAGTTTGAGAGGTTAAAGAGATTGCTTGATGAACTTGGTGATAAGACTGCTATTGTGTTTGTTAACACCAAGAAAACTGCTGATTATGTAGCCAAGAGTTTGGATAAGAATGGATATCGTGTGACCACTTTGCATGGGGGGAAATCACAAGACCAGAGAGAAATTAGTCTTGAAGGTTTCAGGACCAGGAGGTACAATGTCCTTGTTGCAACGGATGTTGCTGGACGTGGTATTGATATACCTGATGTGGCCCATGTAATTAATTATGATATGCCCTCAAGTATTGAAACGTACACCCATCGTATTGGACGTACTGGACGTGCAGGGAAGACTGGTGTAGCCACATCATTGTTGACAATTCACGACACTGATGTCTTCTATGATCTCAAGCAGATGCTCATTCAGAGTAACAGTCATGTTCCTCCTGAATTGGCAAAACATGAAGCCTCAAAGTTCAAGCCTGGTTCTATTCCTGATAGGCCACCTAGACGTAATGACACTATCTTTACGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005682 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009987 GO:0010467 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:0140098 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

710

Amino Acids

82.06

Weight (kDa)

8.85

Isoelectric Point (pI)

42.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DDX23	PF25430	163 - 244	2.9e-22	DDX23-like domain
DEAD	PF00270	314 - 504	2.4e-46	DEAD/DEAH box helicase
Helicase_C	PF00271	539 - 648	1.2e-34	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002950)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28180 AT1G28180 AT2G33730
fragaria_vesca	FvH4_1g07870 FvH4_2g13750
malus_domestica	MD05G1025300.v1.1 MD10G1025500.v1.1
prunus_persica	Prupe.8G029000_v2.0.a1 Prupe.8G029000_v2.0.a1
pyrus_communis	pycom05g01650 pycom10g01680
rosa_chinensis	RchiOBHm_Chr1g0333041 RchiOBHm_Chr2g0093751 RchiOBHm_Chr2g0093761 RchiOBHm_Chr6g0275441
rosa_laevigata	RLG00000013755 RLG00000016434
rosa_multiflora	Rmu_sc0004143.1_g000018 Rmu_sc0021925.1_g000003
rosa_roxburghii	Rroxscaffold_3G00237200 Rroxscaffold_7G00193300
rosa_rugosa	Rorug02G0039500 Rorug06G0092300 Rorug06G0092400 Rorug07G0206900
rosa_samantha	Rh1AG129900 Rh1CG123700 Rh1DG135400 Rh2BG086300 Rh2CG088700 Rh2DG084300 Rh2DG084400 Rh6AG205700 Rh6CG210900 Rh6DG201100 Rh7BG338800
rosa_wichuraiana	Rw1G010290 Rw6G017840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	930
AasI	GACNNNNNNGTC	1 cut(s)	1988
Acc16I	TGCGCA	2 cut(s)	1137, 1170
Acc36I	ACCTGC	1 cut(s)	1369
AccB1I	GGYRCC	1 cut(s)	1117
AccBSI	CCGCTC	2 cut(s)	165, 295
AccII	CGCG	6 cut(s)	84, 231, 249, 339, 393, 523
AclWI	GGATC	2 cut(s)	234, 765
AcuI	CTGAAG	1 cut(s)	1113
AfaI	GTAC	5 cut(s)	542, 895, 1811, 1910, 1930
AfiI	CCNNNNNNNGG	5 cut(s)	217, 223, 331, 556, 843
AgsI	TTSAA	7 cut(s)	829, 1220, 1315, 1420, 1790, 1904, 2074
AjiI	CACGTC	2 cut(s)	1844, 1937
AjnI	CCWGG	3 cut(s)	1270, 1802, 2077
Alw21I	GWGCWC	1 cut(s)	370
Alw26I	GTCTC	3 cut(s)	267, 998, 1148
AlwI	GGATC	2 cut(s)	234, 765
AlwNI	CAGNNNCTG	3 cut(s)	433, 568, 1007
Ama87I	CYCGRG	2 cut(s)	357, 686
AoxI	GGCC	6 cut(s)	348, 354, 683, 970, 1866, 2096
ApeKI	GCWGC	6 cut(s)	695, 722, 901, 956, 1025, 1138
ArsI	GACNNNNNNTTYG	2 cut(s)	1561, 1593
AseI	ATTAAT	1 cut(s)	1878
AspLEI	GCGC	6 cut(s)	300, 339, 703, 1138, 1171, 1512
AsuC2I	CCSGG	5 cut(s)	212, 218, 224, 242, 605
AsuHPI	GGTGA	2 cut(s)	637, 1667
AvaI	CYCGRG	2 cut(s)	357, 686
AvaII	GGWCC	9 cut(s)	208, 214, 220, 238, 244, 388, 598, 1097, 1800
BanI	GGYRCC	1 cut(s)	1117
BanII	GRGCYC	1 cut(s)	440
BauI	CACGAG	3 cut(s)	119, 554, 1125
BbsI	GAAGAC	4 cut(s)	55, 828, 1952, 1984
Bbv12I	GWGCWC	1 cut(s)	370
BbvI	GCAGC	6 cut(s)	682, 709, 888, 943, 1012, 1150
BccI	CCATC	4 cut(s)	11, 38, 946, 1923
BceAI	ACGGC	1 cut(s)	685
BcgI	CGANNNNNNTGC	2 cut(s)	677, 711
BciT130I	CCWGG	3 cut(s)	1272, 1804, 2079
BclI	TGATCA	1 cut(s)	1581
BcnI	CCSGG	5 cut(s)	212, 218, 224, 242, 605
BcoDI	GTCTC	3 cut(s)	267, 998, 1148
BfaI	CTAG	4 cut(s)	471, 849, 1059, 2103
BfoI	RGCGCY	1 cut(s)	1513
BfuAI	ACCTGC	1 cut(s)	1369
BlpI	GCTNAGC	1 cut(s)	726
Bme1390I	CCNGG	8 cut(s)	212, 218, 224, 242, 605, 1272, 1804, 2079
Bme18I	GGWCC	9 cut(s)	208, 214, 220, 238, 244, 388, 598, 1097, 1800
BmeT110I	CYCGRG	2 cut(s)	357, 686
BmgBI	CACGTC	2 cut(s)	1844, 1937
BmiI	GGNNCC	5 cut(s)	215, 221, 239, 245, 1119
BmrFI	CCNGG	8 cut(s)	212, 218, 224, 242, 605, 1272, 1804, 2079
BmsI	GCATC	3 cut(s)	1387, 1600, 2001
BpiI	GAAGAC	4 cut(s)	55, 828, 1952, 1984
BpmI	CTGGAG	3 cut(s)	803, 826, 1621
Bpu10I	CCTNAGC	1 cut(s)	644
Bpu1102I	GCTNAGC	1 cut(s)	726
BpuEI	CTTGAG	4 cut(s)	695, 890, 1879, 1988
BpuMI	CCSGG	5 cut(s)	212, 218, 224, 242, 605
BsaI	GGTCTC	1 cut(s)	267
BsaJI	CCNNGG	3 cut(s)	351, 687, 1271
BsaXI	ACNNNNNCTCC	4 cut(s)	242, 272, 1480, 1510
Bsc4I	CCNNNNNNNGG	5 cut(s)	217, 223, 331, 556, 843
Bse1I	ACTGG	4 cut(s)	809, 1012, 1936, 1954
Bse3DI	GCAATG	2 cut(s)	996, 1407
BseBI	CCWGG	3 cut(s)	1272, 1804, 2079
BseDI	CCNNGG	3 cut(s)	351, 687, 1271
BseGI	GGATG	7 cut(s)	655, 1253, 1359, 1402, 1441, 1615, 1837
BseLI	CCNNNNNNNGG	5 cut(s)	217, 223, 331, 556, 843
BseMI	GCAATG	2 cut(s)	996, 1407
BseMII	CTCAG	4 cut(s)	717, 786, 1416, 1601
BseNI	ACTGG	4 cut(s)	809, 1012, 1936, 1954
BseRI	GAGGAG	7 cut(s)	359, 692, 704, 731, 800, 883, 1094
BseXI	GCAGC	6 cut(s)	682, 709, 888, 943, 1012, 1150
BsgI	GTGCAG	1 cut(s)	1959
Bsh1236I	CGCG	6 cut(s)	84, 231, 249, 339, 393, 523
Bsh1285I	CGRYCG	2 cut(s)	253, 271
BshFI	GGCC	6 cut(s)	350, 356, 685, 972, 1868, 2098
BshNI	GGYRCC	1 cut(s)	1117
BsiEI	CGRYCG	2 cut(s)	253, 271
BsiHKAI	GWGCWC	1 cut(s)	370
BsiHKCI	CYCGRG	2 cut(s)	357, 686
BsiSI	CCGG	6 cut(s)	211, 217, 223, 241, 591, 604
BslFI	GGGAC	6 cut(s)	167, 227, 233, 251, 257, 815
BslI	CCNNNNNNNGG	5 cut(s)	217, 223, 331, 556, 843
BsmAI	GTCTC	3 cut(s)	267, 998, 1148
BsmFI	GGGAC	6 cut(s)	167, 227, 233, 251, 257, 815
BsmI	GAATGC	1 cut(s)	538
BsnI	GGCC	6 cut(s)	350, 356, 685, 972, 1868, 2098
Bso31I	GGTCTC	1 cut(s)	267
BsoBI	CYCGRG	2 cut(s)	357, 686
Bsp1286I	GDGCHC	2 cut(s)	370, 440
Bsp143I	GATC	5 cut(s)	226, 268, 757, 1581, 1999
Bsp1720I	GCTNAGC	1 cut(s)	726
Bsp68I	TCGCGA	1 cut(s)	231
BspANI	GGCC	6 cut(s)	350, 356, 685, 972, 1868, 2098
BspCNI	CTCAG	4 cut(s)	718, 787, 1417, 1600
BspFNI	CGCG	6 cut(s)	84, 231, 249, 339, 393, 523
BspLI	GGNNCC	5 cut(s)	215, 221, 239, 245, 1119
BspMI	ACCTGC	1 cut(s)	1369
BspPI	GGATC	2 cut(s)	234, 765
BspQI	GCTCTTC	2 cut(s)	172, 1434
BspT107I	GGYRCC	1 cut(s)	1117
BspTNI	GGTCTC	1 cut(s)	267
BsrBI	CCGCTC	2 cut(s)	165, 295
BsrDI	GCAATG	2 cut(s)	996, 1407
BsrI	ACTGG	4 cut(s)	809, 1012, 1936, 1954
BssECI	CCNNGG	3 cut(s)	351, 687, 1271
BssMI	GATC	5 cut(s)	226, 268, 757, 1581, 1999
BssSI	CACGAG	3 cut(s)	119, 554, 1125
BssT1I	CCWWGG	1 cut(s)	351
Bst2BI	CACGAG	3 cut(s)	119, 554, 1125
Bst2UI	CCWGG	3 cut(s)	1272, 1804, 2079
Bst4CI	ACNGT	7 cut(s)	278, 305, 311, 317, 326, 1159, 2030
Bst6I	CTCTTC	5 cut(s)	40, 172, 336, 1146, 1434
BstC8I	GCNNGC	6 cut(s)	140, 366, 395, 621, 974, 1134
BstDEI	CTNAG	5 cut(s)	644, 726, 795, 1425, 1587
BstF5I	GGATG	7 cut(s)	655, 1253, 1359, 1402, 1441, 1615, 1837
BstFNI	CGCG	6 cut(s)	84, 231, 249, 339, 393, 523
BstH2I	RGCGCY	1 cut(s)	1513
BstHHI	GCGC	6 cut(s)	300, 339, 703, 1138, 1171, 1512
BstKTI	GATC	5 cut(s)	229, 271, 760, 1584, 2002
BstMAI	GTCTC	3 cut(s)	267, 998, 1148
BstMBI	GATC	5 cut(s)	226, 268, 757, 1581, 1999
BstMCI	CGRYCG	2 cut(s)	253, 271
BstMWI	GCNNNNNNNGC	3 cut(s)	454, 616, 1138
BstNI	CCWGG	3 cut(s)	1272, 1804, 2079
BstSCI	CCNGG	8 cut(s)	210, 216, 222, 240, 603, 1270, 1802, 2077
BstUI	CGCG	6 cut(s)	84, 231, 249, 339, 393, 523
BstV1I	GCAGC	6 cut(s)	682, 709, 888, 943, 1012, 1150
BstV2I	GAAGAC	4 cut(s)	55, 828, 1952, 1984
BstXI	CCANNNNNNTGG	4 cut(s)	952, 967, 1717, 1922
BsuRI	GGCC	6 cut(s)	350, 356, 685, 972, 1868, 2098
BtrI	CACGTC	2 cut(s)	1844, 1937
BtsCI	GGATG	7 cut(s)	655, 1253, 1359, 1402, 1441, 1615, 1837
BtsIMutI	CAGTG	2 cut(s)	1325, 1983
BtuMI	TCGCGA	1 cut(s)	231
BveI	ACCTGC	1 cut(s)	1369
Cac8I	GCNNGC	6 cut(s)	140, 366, 395, 621, 974, 1134
CaiI	CAGNNNCTG	3 cut(s)	433, 568, 1007
CfoI	GCGC	6 cut(s)	300, 339, 703, 1138, 1171, 1512
CpoI	CGGWCCG	2 cut(s)	208, 388
CseI	GACGC	1 cut(s)	422
Csp6I	GTAC	5 cut(s)	541, 894, 1810, 1909, 1929
CspI	CGGWCCG	2 cut(s)	208, 388
CviAII	CATG	6 cut(s)	1114, 1492, 1751, 1871, 2033, 2057
CviQI	GTAC	5 cut(s)	541, 894, 1810, 1909, 1929
DdeI	CTNAG	5 cut(s)	644, 726, 795, 1425, 1587
DpnI	GATC	5 cut(s)	228, 270, 759, 1583, 2001
DpnII	GATC	5 cut(s)	226, 268, 757, 1581, 1999
DraI	TTTAAA	1 cut(s)	1234
DrdI	GACNNNNNNGTC	1 cut(s)	1988
DseDI	GACNNNNNNGTC	1 cut(s)	1988
Eam1104I	CTCTTC	5 cut(s)	40, 172, 336, 1146, 1434
EarI	CTCTTC	5 cut(s)	40, 172, 336, 1146, 1434
Eco130I	CCWWGG	1 cut(s)	351
Eco24I	GRGCYC	1 cut(s)	440
Eco31I	GGTCTC	1 cut(s)	267
Eco32I	GATATC	1 cut(s)	1733
Eco47I	GGWCC	9 cut(s)	208, 214, 220, 238, 244, 388, 598, 1097, 1800
Eco57I	CTGAAG	1 cut(s)	1113
Eco88I	CYCGRG	2 cut(s)	357, 686
EcoO109I	RGGNCCY	1 cut(s)	1097
EcoRII	CCWGG	3 cut(s)	1270, 1802, 2077
EcoRV	GATATC	1 cut(s)	1733
EcoT14I	CCWWGG	1 cut(s)	351
EcoT38I	GRGCYC	1 cut(s)	440
ErhI	CCWWGG	1 cut(s)	351
FaeI	CATG	6 cut(s)	1117, 1495, 1754, 1874, 2036, 2060
FaqI	GGGAC	6 cut(s)	167, 227, 233, 251, 257, 815
FatI	CATG	6 cut(s)	1113, 1491, 1750, 1870, 2032, 2056
FbaI	TGATCA	1 cut(s)	1581
FokI	GGATG	7 cut(s)	662, 1260, 1366, 1409, 1448, 1622, 1844
FriOI	GRGCYC	1 cut(s)	440
FspBI	CTAG	4 cut(s)	471, 849, 1059, 2103
FspI	TGCGCA	2 cut(s)	1137, 1170
GlaI	GCGC	6 cut(s)	299, 338, 702, 1137, 1170, 1511
GsuI	CTGGAG	3 cut(s)	803, 826, 1621
HaeII	RGCGCY	1 cut(s)	1513
HaeIII	GGCC	6 cut(s)	350, 356, 685, 972, 1868, 2098
HapII	CCGG	6 cut(s)	211, 217, 223, 241, 591, 604
HgaI	GACGC	1 cut(s)	422
HhaI	GCGC	6 cut(s)	300, 339, 703, 1138, 1171, 1512
Hin1II	CATG	6 cut(s)	1117, 1495, 1754, 1874, 2036, 2060
Hin6I	GCGC	6 cut(s)	298, 337, 701, 1136, 1169, 1510
HinP1I	GCGC	6 cut(s)	298, 337, 701, 1136, 1169, 1510
HincII	GTYRAC	3 cut(s)	1047, 1681, 1971
HindII	GTYRAC	3 cut(s)	1047, 1681, 1971
HindIII	AAGCTT	1 cut(s)	617
HinfI	GANTC	6 cut(s)	176, 486, 655, 853, 1315, 1534
HpaI	GTTAAC	1 cut(s)	1681
HpaII	CCGG	6 cut(s)	211, 217, 223, 241, 591, 604
HphI	GGTGA	2 cut(s)	637, 1667
Hpy166II	GTNNAC	4 cut(s)	1047, 1681, 1911, 1971
Hpy188I	TCNGA	9 cut(s)	175, 208, 485, 660, 818, 951, 1521, 1590, 2022
Hpy8I	GTNNAC	4 cut(s)	1047, 1681, 1911, 1971
Hpy99I	CGWCG	2 cut(s)	17, 43
HpyAV	CCTTC	5 cut(s)	658, 948, 1088, 1416, 1784
HpyCH4III	ACNGT	7 cut(s)	278, 305, 311, 317, 326, 1159, 2030
HpyCH4IV	ACGT	5 cut(s)	1843, 1907, 1927, 1936, 2107
HpyCH4V	TGCA	8 cut(s)	976, 1001, 1323, 1400, 1613, 1750, 1826, 1940
HpyF10VI	GCNNNNNNNGC	3 cut(s)	454, 616, 1138
HpyF3I	CTNAG	5 cut(s)	644, 726, 795, 1425, 1587
HpySE526I	ACGT	5 cut(s)	1843, 1907, 1927, 1936, 2107
Hsp92II	CATG	6 cut(s)	1117, 1495, 1754, 1874, 2036, 2060
HspAI	GCGC	6 cut(s)	298, 337, 701, 1136, 1169, 1510
Ksp22I	TGATCA	1 cut(s)	1581
KspAI	GTTAAC	1 cut(s)	1681
Kzo9I	GATC	5 cut(s)	226, 268, 757, 1581, 1999
LguI	GCTCTTC	2 cut(s)	172, 1434
LmnI	GCTCC	9 cut(s)	14, 292, 334, 406, 570, 607, 640, 898, 1507
Lsp1109I	GCAGC	6 cut(s)	682, 709, 888, 943, 1012, 1150
LweI	GCATC	3 cut(s)	1387, 1600, 2001
MaeI	CTAG	4 cut(s)	471, 849, 1059, 2103
MaeII	ACGT	5 cut(s)	1843, 1907, 1927, 1936, 2107
MaeIII	GTNAC	6 cut(s)	305, 311, 317, 1546, 1738, 2024
MalI	GATC	5 cut(s)	228, 270, 759, 1583, 2001
MbiI	CCGCTC	2 cut(s)	165, 295
MboI	GATC	5 cut(s)	226, 268, 757, 1581, 1999
MfeI	CAATTG	2 cut(s)	1215, 1551
MhlI	GDGCHC	2 cut(s)	370, 440
MmeI	TCCRAC	1 cut(s)	124
MseI	TTAA	7 cut(s)	68, 465, 1185, 1233, 1631, 1680, 1878
MslI	CAYNNNNRTG	2 cut(s)	950, 1475
MspA1I	CMGCKG	1 cut(s)	1562
MspI	CCGG	6 cut(s)	211, 217, 223, 241, 591, 604
MspR9I	CCNGG	8 cut(s)	212, 218, 224, 242, 605, 1272, 1804, 2079
MunI	CAATTG	2 cut(s)	1215, 1551
Mva1269I	GAATGC	1 cut(s)	538
MvaI	CCWGG	3 cut(s)	1272, 1804, 2079
MvnI	CGCG	6 cut(s)	84, 231, 249, 339, 393, 523
MwoI	GCNNNNNNNGC	3 cut(s)	454, 616, 1138
NciI	CCSGG	5 cut(s)	212, 218, 224, 242, 605
NdeII	GATC	5 cut(s)	226, 268, 757, 1581, 1999
NlaIII	CATG	6 cut(s)	1117, 1495, 1754, 1874, 2036, 2060
NlaIV	GGNNCC	5 cut(s)	215, 221, 239, 245, 1119
NmuCI	GTSAC	4 cut(s)	305, 311, 317, 1738
NruI	TCGCGA	1 cut(s)	231
NsbI	TGCGCA	2 cut(s)	1137, 1170
PciSI	GCTCTTC	2 cut(s)	172, 1434
PcsI	WCGNNNNNNNCGW	4 cut(s)	47, 446, 1924, 1933
PctI	GAATGC	1 cut(s)	538
PfeI	GAWTC	6 cut(s)	176, 486, 655, 853, 1315, 1534
Ple19I	CGATCG	1 cut(s)	271
PpuMI	RGGWCCY	1 cut(s)	1097
PshBI	ATTAAT	1 cut(s)	1878
PsiI	TTATAA	1 cut(s)	930
Psp5II	RGGWCCY	1 cut(s)	1097
Psp6I	CCWGG	3 cut(s)	1270, 1802, 2077
PspGI	CCWGG	3 cut(s)	1270, 1802, 2077
PspN4I	GGNNCC	5 cut(s)	215, 221, 239, 245, 1119
PspPPI	RGGWCCY	1 cut(s)	1097
PstNI	CAGNNNCTG	3 cut(s)	433, 568, 1007
PvuI	CGATCG	1 cut(s)	271
PvuII	CAGCTG	1 cut(s)	1562
RruI	TCGCGA	1 cut(s)	231
RsaI	GTAC	5 cut(s)	542, 895, 1811, 1910, 1930
RsaNI	GTAC	5 cut(s)	541, 894, 1810, 1909, 1929
RseI	CAYNNNNRTG	2 cut(s)	950, 1475
Rsr2I	CGGWCCG	2 cut(s)	208, 388
RsrII	CGGWCCG	2 cut(s)	208, 388
SapI	GCTCTTC	2 cut(s)	172, 1434
SaqAI	TTAA	7 cut(s)	68, 465, 1185, 1233, 1631, 1680, 1878
Sau3AI	GATC	5 cut(s)	226, 268, 757, 1581, 1999
ScrFI	CCNGG	8 cut(s)	212, 218, 224, 242, 605, 1272, 1804, 2079
SduI	GDGCHC	2 cut(s)	370, 440
SfaNI	GCATC	3 cut(s)	1387, 1600, 2001
SinI	GGWCC	9 cut(s)	208, 214, 220, 238, 244, 388, 598, 1097, 1800
SmiMI	CAYNNNNRTG	2 cut(s)	950, 1475
SmlI	CTYRAG	4 cut(s)	710, 905, 1894, 2003
SmoI	CTYRAG	4 cut(s)	710, 905, 1894, 2003
SspMI	CTAG	4 cut(s)	471, 849, 1059, 2103
StyD4I	CCNGG	8 cut(s)	210, 216, 222, 240, 603, 1270, 1802, 2077
StyI	CCWWGG	1 cut(s)	351
TaaI	ACNGT	7 cut(s)	278, 305, 311, 317, 326, 1159, 2030
TaiI	ACGT	5 cut(s)	1846, 1910, 1930, 1939, 2110
TaqI	TCGA	5 cut(s)	15, 271, 370, 440, 495
TaqII	GACCGA	1 cut(s)	267
TauI	GCSGC	7 cut(s)	29, 49, 108, 138, 298, 701, 1378
TfiI	GAWTC	6 cut(s)	176, 486, 655, 853, 1315, 1534
Tru1I	TTAA	7 cut(s)	68, 465, 1185, 1233, 1631, 1680, 1878
Tru9I	TTAA	7 cut(s)	68, 465, 1185, 1233, 1631, 1680, 1878
TscAI	CASTG	2 cut(s)	1325, 1990
TseFI	GTSAC	4 cut(s)	305, 311, 317, 1738
TseI	GCWGC	6 cut(s)	695, 722, 901, 956, 1025, 1138
Tsp45I	GTSAC	4 cut(s)	305, 311, 317, 1738
TspDTI	ATGAA	5 cut(s)	17, 545, 1452, 1662, 2073
TspGWI	ACGGA	3 cut(s)	169, 911, 1844
TspRI	CASTG	2 cut(s)	1325, 1990
VpaK11BI	GGWCC	9 cut(s)	208, 214, 220, 238, 244, 388, 598, 1097, 1800
VspI	ATTAAT	1 cut(s)	1878
XspI	CTAG	4 cut(s)	471, 849, 1059, 2103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.