No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g29120 FvH4_1g29701 FvH4_2g10340 FvH4_3g26319 FvH4_4g05781 FvH4_4g16191 FvH4_4g17212 FvH4_4g18132 FvH4_6g16754 FvH4_6g23731 |
| rosa_chinensis | RchiOBHm_Chr0c29g0501111 RchiOBHm_Chr2g0126951 RchiOBHm_Chr2g0133761 RchiOBHm_Chr4g0407741 RchiOBHm_Chr6g0278911 |
| rosa_laevigata | RLG00000034039 |
| rosa_multiflora | Rmu_co8166508.1_g000001 Rmu_sc0002986.1_g000053 Rmu_sc0005664.1_g000049 |
| rosa_roxburghii | Rroxscaffold_3G00250140 Rroxscaffold_5G00362530 Rroxscaffold_6G00423300 |
| rosa_rugosa | Rorug04G0115900 Rorug04G0116000 Rorug04G0116000 Rorug04G0178600 Rorug04G0178700 Rorug04G0178800 Rorug04G0178800 Rorug05G0495800 |
| rosa_samantha | Rh1CG126400 Rh4AG111400 Rh4BG376900 Rh6BG350300 Rh6BG405500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 160 |
| AcsI | RAATTY | 1 cut(s) | 34 |
| AfaI | GTAC | 1 cut(s) | 62 |
| AluBI | AGCT | 1 cut(s) | 28 |
| AluI | AGCT | 1 cut(s) | 28 |
| AoxI | GGCC | 1 cut(s) | 160 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| ApoI | RAATTY | 1 cut(s) | 34 |
| AseI | ATTAAT | 1 cut(s) | 272 |
| BalI | TGGCCA | 1 cut(s) | 162 |
| BbvI | GCAGC | 1 cut(s) | 69 |
| BisI | GCNGC | 1 cut(s) | 83 |
| BlsI | GCNGC | 1 cut(s) | 84 |
| BmcAI | AGTACT | 1 cut(s) | 62 |
| BmiI | GGNNCC | 1 cut(s) | 308 |
| BmrI | ACTGGG | 1 cut(s) | 311 |
| BmuI | ACTGGG | 1 cut(s) | 311 |
| BsaJI | CCNNGG | 1 cut(s) | 257 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 280, 310 |
| Bse1I | ACTGG | 1 cut(s) | 306 |
| Bse3DI | GCAATG | 2 cut(s) | 138, 163 |
| BseDI | CCNNGG | 1 cut(s) | 257 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseMI | GCAATG | 2 cut(s) | 138, 163 |
| BseMII | CTCAG | 1 cut(s) | 53 |
| BseNI | ACTGG | 1 cut(s) | 306 |
| BseXI | GCAGC | 1 cut(s) | 69 |
| BsgI | GTGCAG | 1 cut(s) | 77 |
| Bsh1285I | CGRYCG | 1 cut(s) | 181 |
| BshFI | GGCC | 1 cut(s) | 162 |
| BsiEI | CGRYCG | 1 cut(s) | 181 |
| BsnI | GGCC | 1 cut(s) | 162 |
| BspANI | GGCC | 1 cut(s) | 162 |
| BspCNI | CTCAG | 1 cut(s) | 52 |
| BspLI | GGNNCC | 1 cut(s) | 308 |
| BsrDI | GCAATG | 2 cut(s) | 138, 163 |
| BsrI | ACTGG | 1 cut(s) | 306 |
| BssECI | CCNNGG | 1 cut(s) | 257 |
| Bst4CI | ACNGT | 1 cut(s) | 126 |
| BstDEI | CTNAG | 1 cut(s) | 39 |
| BstDSI | CCRYGG | 1 cut(s) | 257 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstMCI | CGRYCG | 1 cut(s) | 181 |
| BstV1I | GCAGC | 1 cut(s) | 69 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 126 |
| BsuRI | GGCC | 1 cut(s) | 162 |
| BtgI | CCRYGG | 1 cut(s) | 257 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| Csp6I | GTAC | 1 cut(s) | 61 |
| CviAII | CATG | 2 cut(s) | 164, 293 |
| CviJI | RGCY | 7 cut(s) | 28, 82, 105, 136, 162, 262, 309 |
| CviKI_1 | RGCY | 7 cut(s) | 28, 82, 105, 136, 162, 262, 309 |
| CviQI | GTAC | 1 cut(s) | 61 |
| DdeI | CTNAG | 1 cut(s) | 39 |
| EaeI | YGGCCR | 1 cut(s) | 160 |
| EcoRI | GAATTC | 1 cut(s) | 34 |
| FaeI | CATG | 2 cut(s) | 167, 296 |
| FaiI | YATR | 4 cut(s) | 67, 69, 165, 294 |
| FatI | CATG | 2 cut(s) | 163, 292 |
| FauNDI | CATATG | 1 cut(s) | 67 |
| Fnu4HI | GCNGC | 1 cut(s) | 83 |
| FokI | GGATG | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 1 cut(s) | 83 |
| GluI | GCNGC | 1 cut(s) | 83 |
| HaeIII | GGCC | 1 cut(s) | 162 |
| Hin1II | CATG | 2 cut(s) | 167, 296 |
| Hpy166II | GTNNAC | 1 cut(s) | 299 |
| Hpy188I | TCNGA | 1 cut(s) | 42 |
| Hpy8I | GTNNAC | 1 cut(s) | 299 |
| Hpy99I | CGWCG | 6 cut(s) | 135, 149, 197, 208, 227, 248 |
| HpyCH4III | ACNGT | 1 cut(s) | 126 |
| HpyCH4V | TGCA | 2 cut(s) | 58, 85 |
| HpyF3I | CTNAG | 1 cut(s) | 39 |
| Hsp92II | CATG | 2 cut(s) | 167, 296 |
| LmnI | GCTCC | 1 cut(s) | 306 |
| LpnPI | CCDG | 1 cut(s) | 287 |
| Lsp1109I | GCAGC | 1 cut(s) | 69 |
| MlsI | TGGCCA | 1 cut(s) | 162 |
| MluCI | AATT | 3 cut(s) | 34, 269, 273 |
| MluNI | TGGCCA | 1 cut(s) | 162 |
| MnlI | CCTC | 2 cut(s) | 179, 282 |
| Mox20I | TGGCCA | 1 cut(s) | 162 |
| MscI | TGGCCA | 1 cut(s) | 162 |
| MseI | TTAA | 1 cut(s) | 272 |
| Msp20I | TGGCCA | 1 cut(s) | 162 |
| NdeI | CATATG | 1 cut(s) | 67 |
| NlaIII | CATG | 2 cut(s) | 167, 296 |
| NlaIV | GGNNCC | 1 cut(s) | 308 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 206 |
| PkrI | GCNGC | 1 cut(s) | 84 |
| PshBI | ATTAAT | 1 cut(s) | 272 |
| PspN4I | GGNNCC | 1 cut(s) | 308 |
| RsaI | GTAC | 1 cut(s) | 62 |
| RsaNI | GTAC | 1 cut(s) | 61 |
| SaqAI | TTAA | 1 cut(s) | 272 |
| SatI | GCNGC | 1 cut(s) | 83 |
| ScaI | AGTACT | 1 cut(s) | 62 |
| SetI | ASST | 2 cut(s) | 30, 77 |
| Sse9I | AATT | 3 cut(s) | 34, 269, 273 |
| TaaI | ACNGT | 1 cut(s) | 126 |
| TaqII | GACCGA | 1 cut(s) | 195 |
| TasI | AATT | 3 cut(s) | 34, 269, 273 |
| TatI | WGTACW | 1 cut(s) | 60 |
| Tru1I | TTAA | 1 cut(s) | 272 |
| Tru9I | TTAA | 1 cut(s) | 272 |
| TseI | GCWGC | 1 cut(s) | 82 |
| VspI | ATTAAT | 1 cut(s) | 272 |
| XapI | RAATTY | 1 cut(s) | 34 |
| ZrmI | AGTACT | 1 cut(s) | 62 |