Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003686

Physical Location & Seq

Genomic Coordinates Reverse (-)

31341616 .. 31343554

Gene Structure 1939 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0178600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGCGAGGCCTTCCTCCACCGTTCATGTCCCCAATCGACGATTCCGTTCTGATCACGATAACGGCCGTCACTCCCCGCCGGACTATGACAACTCACCTGACGACCGCCGCCACCGTCGCAGCCCCAGCTATGAAAGGTACGACCGCCACCGAAATCGCTCTTACTCTCCTGATTACCCTAGCCCTAGGTCCAACGGAGGCCGAAGATTCGGTCGGGCCGGGAACGACCGGTCTTACTCGCCTCGACGAAGCCCTAGGTCCAACGGAGGGCCGGAGTCTTTACCCAGGAGATTCGGGCGCGCCGGGAACGATAGGGACCGGAATGGAAGGTGGCCAGAGGCGGAGGAGTCCGACGAGGAGCTGAAGGGGCTGAATATTGAGGAGTACCGGAGGCTGAAGAGGCAGAAGCTGAGGAAGGCGTTGAGGAGTTGTATCTGGAATGTGACGCCGAGCCCGCCGAGGAATGAGAACGATGATTTCGAATTGGAGGACAAGGCTGACGAGATTCCAGAGGTTTTTGGTGAAGAGAACAACGATGCAGGCGAGAAATTGAAGGACAAAGCCAAGAGTGAATCGGAGTCTGAATCGGAATCGGAATCGGAGGATTCGCGGTCGAGAAAGAGGAAGAAGAGTTCGGGTTCTAAGCGTAGGAAGAAGAGTTCGAGATACAGTGATAGCGAATCGGAGAGCGAGAGTGATGATGAGTCAGATGAGGAAGAGGATCGCAGAAGGAGAAGGAAATCTAGAACTAGGAGTAAGCGAAAGAAGAGCAGAAGAGAAAGGAGAAGAAGGAAGAGTAGGCGGAGCAGCGATTCCGATGAGAGTGAAGCAAGTGATAGTGAGGAGGGTTCAGATTCTTCTGATAGGGTAAAGTCGAAGAAGAAGAAGGGAAAGGTGAGCAGTAAGAGTAAGAAGAAGAAGTACTCTGAAACGGAGAGTGAGGATTCTGGTTCAGAGAAGAGTTTGGATTCTGAAGTTGATGCCAAGCCTAAAGCTCTAGTCGAAGTGGAGGAGCCAGAAATGGATGAGAATAGTATTGAGGCCTTGAAATTGAAGGAAATCCTTGAGGCTCAGAGGAACCCTTCATTGGATTTGGATAATGAACCTGTGGTTGGGCCAATGCCCTTGCCTAGAGCCGAAGGGCATATTAGTTATGGTGGAGCGCTTAGGCCTGGTGAAGGTGATGCCATTGCACAGTATGTTCAACAAGGGAAGCGTATTCCGCGAAGAGGAGAAGTTGGTCTTTCTGCAGAGGAGATTCAGAAGTTTGAGGGTCTTGGCTATGTGATGAGTGGTAGTAGGCACCAGAGGATGAATGCCATTCGTATTAGAAAAGAAAACCAGGTTTATAGTGCTGAGGATAAGAGGGCATTGGCCATGTTTAACTATGAGGAGAAAGCAAAGCGTGAGCACAAGGTTATGGCTGATTTGCAGCGGCTGGTTCAGCGCCATATTGGACAGGATGTTGGTCCTACTCACGATCCCTTTTCTTCCAAGGCCTCCGAGGATCCTGATGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001525 GO:0001568 GO:0001944 GO:0003008 GO:0003013 GO:0003073 GO:0003085 GO:0003674 GO:0003824 GO:0004177 GO:0006508 GO:0006807 GO:0006950 GO:0007275 GO:0008015 GO:0008150 GO:0008152 GO:0008217 GO:0008233 GO:0008238 GO:0008239 GO:0009611 GO:0009653 GO:0010594 GO:0010632 GO:0016787 GO:0019538 GO:0030334 GO:0032501 GO:0032502 GO:0032879 GO:0035239 GO:0035295 GO:0040012 GO:0042060 GO:0043170 GO:0043535 GO:0044238 GO:0045776 GO:0048514 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051239 GO:0051270 GO:0060055 GO:0065007 GO:0065008 GO:0070011 GO:0071704 GO:0072358 GO:0072359 GO:0140096 GO:1901564 GO:2000145

KEGG Pathways

Metabolic & Signaling

ko04614 ko04974 map04614 map04974

Pfam Domains

Protein Families

Peptidase_S28

Protein Analysis

507

Amino Acids

58.34

Weight (kDa)

9.16

Isoelectric Point (pI)

93.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nkap_C	PF06047	384 - 482	9.6e-47	NF-kappa-B-activating protein C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003686)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g29120 FvH4_1g29701 FvH4_2g10340 FvH4_3g26319 FvH4_4g05781 FvH4_4g16191 FvH4_4g17212 FvH4_4g18132 FvH4_6g16754 FvH4_6g23731
rosa_chinensis	RchiOBHm_Chr0c29g0501111 RchiOBHm_Chr2g0126951 RchiOBHm_Chr2g0133761 RchiOBHm_Chr4g0407741 RchiOBHm_Chr6g0278911
rosa_laevigata	RLG00000034039
rosa_multiflora	Rmu_co8166508.1_g000001 Rmu_sc0002986.1_g000053 Rmu_sc0005664.1_g000049
rosa_roxburghii	Rroxscaffold_3G00250140 Rroxscaffold_5G00362530 Rroxscaffold_6G00423300
rosa_rugosa	Rorug04G0115900 Rorug04G0116000 Rorug04G0116000 Rorug04G0178600 Rorug04G0178700 Rorug04G0178800 Rorug04G0178800 Rorug05G0495800
rosa_samantha	Rh1CG126400 Rh4AG111400 Rh4BG376900 Rh6BG350300 Rh6BG405500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1302
AccII	CGCG	3 cut(s)	300, 610, 1225
AclWI	GGATC	4 cut(s)	729, 1475, 1502, 1515
AcoI	YGGCCR	3 cut(s)	64, 332, 1374
AcuI	CTGAAG	3 cut(s)	383, 416, 993
AcyI	GRCGYC	1 cut(s)	446
AfaI	GTAC	3 cut(s)	140, 386, 923
AfeI	AGCGCT	1 cut(s)	1164
AfiI	CCNNNNNNNGG	5 cut(s)	267, 1087, 1112, 1178, 1229
AgeI	ACCGGT	1 cut(s)	228
AgsI	TTSAA	4 cut(s)	553, 1048, 1054, 1205
AjnI	CCWGG	3 cut(s)	284, 1171, 1341
AjuI	GAANNNNNNNTTGG	6 cut(s)	26, 58, 1070, 1095, 1102, 1127
AloI	GAACNNNNNNTCC	4 cut(s)	616, 643, 648, 675
AluBI	AGCT	4 cut(s)	129, 361, 409, 995
AluI	AGCT	4 cut(s)	129, 361, 409, 995
Alw21I	GWGCWC	1 cut(s)	1413
AlwI	GGATC	4 cut(s)	729, 1475, 1502, 1515
AlwNI	CAGNNNCTG	2 cut(s)	409, 1438
Aor51HI	AGCGCT	1 cut(s)	1164
ApeKI	GCWGC	3 cut(s)	120, 807, 1432
ArsI	GACNNNNNNTTYG	2 cut(s)	196, 228
AscI	GGCGCGCC	1 cut(s)	298
AsiGI	ACCGGT	1 cut(s)	228
AspA2I	CCTAGG	2 cut(s)	185, 254
AspLEI	GCGC	4 cut(s)	300, 302, 1165, 1449
AspS9I	GGNCC	7 cut(s)	189, 216, 258, 269, 316, 1115, 1469
AsuC2I	CCSGG	2 cut(s)	220, 304
AsuHPI	GGTGA	5 cut(s)	87, 533, 907, 1187, 1193
AsuII	TTCGAA	1 cut(s)	480
AvaII	GGWCC	4 cut(s)	189, 258, 316, 1469
AvrII	CCTAGG	2 cut(s)	185, 254
BalI	TGGCCA	2 cut(s)	334, 1376
BamHI	GGATCC	1 cut(s)	1507
BanI	GGYRCC	1 cut(s)	1302
BanII	GRGCYC	1 cut(s)	455
BarI	GAAGNNNNNNTAC	2 cut(s)	905, 937
Bbv12I	GWGCWC	1 cut(s)	1413
BbvCI	CCTCAGC	2 cut(s)	410, 1356
BbvI	GCAGC	3 cut(s)	132, 819, 1444
BceAI	ACGGC	2 cut(s)	51, 79
BciT130I	CCWGG	3 cut(s)	286, 1173, 1343
BclI	TGATCA	1 cut(s)	52
BcnI	CCSGG	2 cut(s)	220, 304
BfaI	CTAG	7 cut(s)	180, 186, 255, 744, 750, 998, 1131
BfmI	CTRYAG	1 cut(s)	1248
BfoI	RGCGCY	2 cut(s)	1166, 1450
BisI	GCNGC	5 cut(s)	109, 121, 808, 1433, 1436
BlnI	CCTAGG	2 cut(s)	185, 254
BlsI	GCNGC	5 cut(s)	110, 122, 809, 1434, 1437
BmcAI	AGTACT	1 cut(s)	923
Bme1390I	CCNGG	5 cut(s)	220, 286, 304, 1173, 1343
Bme18I	GGWCC	4 cut(s)	189, 258, 316, 1469
BmgT120I	GGNCC	7 cut(s)	189, 216, 258, 269, 316, 1115, 1469
BmiI	GGNNCC	5 cut(s)	317, 1014, 1079, 1304, 1509
BmrFI	CCNGG	5 cut(s)	220, 286, 304, 1173, 1343
BmsI	GCATC	3 cut(s)	526, 970, 1174
Bpu10I	CCTNAGC	3 cut(s)	410, 1166, 1356
Bpu14I	TTCGAA	1 cut(s)	480
BpuEI	CTTGAG	1 cut(s)	1085
BpuMI	CCSGG	2 cut(s)	220, 304
BsaHI	GRCGYC	1 cut(s)	446
BsaJI	CCNNGG	6 cut(s)	185, 254, 284, 458, 1494, 1503
BsaWI	WCCGGW	3 cut(s)	228, 318, 387
Bsc4I	CCNNNNNNNGG	5 cut(s)	267, 1087, 1112, 1178, 1229
Bse118I	RCCGGY	1 cut(s)	228
Bse3DI	GCAATG	1 cut(s)	1188
BseBI	CCWGG	3 cut(s)	286, 1173, 1343
BseDI	CCNNGG	6 cut(s)	185, 254, 284, 458, 1494, 1503
BseGI	GGATG	3 cut(s)	1030, 1317, 1468
BseLI	CCNNNNNNNGG	5 cut(s)	267, 1087, 1112, 1178, 1229
BseMI	GCAATG	1 cut(s)	1188
BseMII	CTCAG	3 cut(s)	401, 1085, 1347
BsePI	GCGCGC	1 cut(s)	298
BseRI	GAGGAG	9 cut(s)	359, 371, 395, 439, 857, 1025, 1245, 1268, 1406
BseX3I	CGGCCG	1 cut(s)	64
BseXI	GCAGC	3 cut(s)	132, 819, 1444
BseYI	CCCAGC	1 cut(s)	125
Bsh1236I	CGCG	3 cut(s)	300, 610, 1225
Bsh1285I	CGRYCG	6 cut(s)	67, 106, 145, 214, 229, 614
BshNI	GGYRCC	1 cut(s)	1302
BshTI	ACCGGT	1 cut(s)	228
BsiEI	CGRYCG	6 cut(s)	67, 106, 145, 214, 229, 614
BsiHKAI	GWGCWC	1 cut(s)	1413
BsiSI	CCGG	7 cut(s)	80, 219, 229, 272, 303, 319, 388
BslFI	GGGAC	2 cut(s)	14, 329
BslI	CCNNNNNNNGG	5 cut(s)	267, 1087, 1112, 1178, 1229
BsmFI	GGGAC	2 cut(s)	14, 329
BsmI	GAATGC	1 cut(s)	1321
Bsp119I	TTCGAA	1 cut(s)	480
Bsp1286I	GDGCHC	2 cut(s)	455, 1413
Bsp143I	GATC	4 cut(s)	52, 721, 1480, 1507
BspCNI	CTCAG	3 cut(s)	402, 1084, 1348
BspFNI	CGCG	3 cut(s)	300, 610, 1225
BspLI	GGNNCC	5 cut(s)	317, 1014, 1079, 1304, 1509
BspMAI	CTGCAG	1 cut(s)	1252
BspPI	GGATC	4 cut(s)	729, 1475, 1502, 1515
BspQI	GCTCTTC	1 cut(s)	761
BspT104I	TTCGAA	1 cut(s)	480
BspT107I	GGYRCC	1 cut(s)	1302
BsrDI	GCAATG	1 cut(s)	1188
BsrFI	RCCGGY	1 cut(s)	228
BssAI	RCCGGY	1 cut(s)	228
BssECI	CCNNGG	6 cut(s)	185, 254, 284, 458, 1494, 1503
BssHII	GCGCGC	1 cut(s)	298
BssMI	GATC	4 cut(s)	52, 721, 1480, 1507
BssNI	GRCGYC	1 cut(s)	446
BssT1I	CCWWGG	3 cut(s)	185, 254, 1494
Bst2UI	CCWGG	3 cut(s)	286, 1173, 1343
Bst4CI	ACNGT	4 cut(s)	22, 116, 671, 1197
BstACI	GRCGYC	1 cut(s)	446
BstBI	TTCGAA	1 cut(s)	480
BstC8I	GCNNGC	3 cut(s)	300, 455, 541
BstDEI	CTNAG	5 cut(s)	410, 642, 1071, 1166, 1356
BstENI	CCTNNNNNAGG	1 cut(s)	1176
BstF5I	GGATG	3 cut(s)	1030, 1317, 1468
BstFNI	CGCG	3 cut(s)	300, 610, 1225
BstH2I	RGCGCY	2 cut(s)	1166, 1450
BstHHI	GCGC	4 cut(s)	300, 302, 1165, 1449
BstKTI	GATC	4 cut(s)	55, 724, 1483, 1510
BstMBI	GATC	4 cut(s)	52, 721, 1480, 1507
BstMCI	CGRYCG	6 cut(s)	67, 106, 145, 214, 229, 614
BstMWI	GCNNNNNNNGC	7 cut(s)	117, 126, 367, 400, 454, 1222, 1444
BstNI	CCWGG	3 cut(s)	286, 1173, 1343
BstSCI	CCNGG	5 cut(s)	218, 284, 302, 1171, 1341
BstSFI	CTRYAG	1 cut(s)	1248
BstUI	CGCG	3 cut(s)	300, 610, 1225
BstV1I	GCAGC	3 cut(s)	132, 819, 1444
BstX2I	RGATCY	1 cut(s)	1507
BstYI	RGATCY	1 cut(s)	1507
BstZI	CGGCCG	1 cut(s)	64
BtsCI	GGATG	3 cut(s)	1030, 1317, 1468
BtsIMutI	CAGTG	1 cut(s)	676
Cac8I	GCNNGC	3 cut(s)	300, 455, 541
CaiI	CAGNNNCTG	2 cut(s)	409, 1438
CfoI	GCGC	4 cut(s)	300, 302, 1165, 1449
Cfr10I	RCCGGY	1 cut(s)	228
Cfr13I	GGNCC	7 cut(s)	189, 216, 258, 269, 316, 1115, 1469
CseI	GACGC	1 cut(s)	454
CsiI	ACCWGGT	1 cut(s)	1341
Csp6I	GTAC	3 cut(s)	139, 385, 922
CspAI	ACCGGT	1 cut(s)	228
CviAII	CATG	2 cut(s)	26, 1378
CviQI	GTAC	3 cut(s)	139, 385, 922
DdeI	CTNAG	5 cut(s)	410, 642, 1071, 1166, 1356
DpnI	GATC	4 cut(s)	54, 723, 1482, 1509
DpnII	GATC	4 cut(s)	52, 721, 1480, 1507
EaeI	YGGCCR	3 cut(s)	64, 332, 1374
EagI	CGGCCG	1 cut(s)	64
EciI	GGCGGA	2 cut(s)	356, 817
EclXI	CGGCCG	1 cut(s)	64
Eco130I	CCWWGG	3 cut(s)	185, 254, 1494
Eco147I	AGGCCT	4 cut(s)	10, 1043, 1171, 1499
Eco24I	GRGCYC	1 cut(s)	455
Eco47I	GGWCC	4 cut(s)	189, 258, 316, 1469
Eco47III	AGCGCT	1 cut(s)	1164
Eco52I	CGGCCG	1 cut(s)	64
Eco57I	CTGAAG	3 cut(s)	383, 416, 993
EcoNI	CCTNNNNNAGG	1 cut(s)	1176
EcoRII	CCWGG	3 cut(s)	284, 1171, 1341
EcoT14I	CCWWGG	3 cut(s)	185, 254, 1494
EcoT38I	GRGCYC	1 cut(s)	455
ErhI	CCWWGG	3 cut(s)	185, 254, 1494
FaeI	CATG	2 cut(s)	29, 1381
FalI	AAGNNNNNCTT	2 cut(s)	1227, 1259
FaqI	GGGAC	2 cut(s)	14, 329
FatI	CATG	2 cut(s)	25, 1377
FauI	CCCGC	2 cut(s)	84, 462
FbaI	TGATCA	1 cut(s)	52
Fnu4HI	GCNGC	5 cut(s)	109, 121, 808, 1433, 1436
FokI	GGATG	3 cut(s)	1037, 1324, 1475
FriOI	GRGCYC	1 cut(s)	455
Fsp4HI	GCNGC	5 cut(s)	109, 121, 808, 1433, 1436
FspBI	CTAG	7 cut(s)	180, 186, 255, 744, 750, 998, 1131
GlaI	GCGC	4 cut(s)	299, 301, 1164, 1448
GluI	GCNGC	5 cut(s)	109, 121, 808, 1433, 1436
GsaI	CCCAGC	1 cut(s)	129
HaeII	RGCGCY	2 cut(s)	1166, 1450
HapII	CCGG	7 cut(s)	80, 219, 229, 272, 303, 319, 388
HgaI	GACGC	1 cut(s)	454
HhaI	GCGC	4 cut(s)	300, 302, 1165, 1449
Hin1I	GRCGYC	1 cut(s)	446
Hin1II	CATG	2 cut(s)	29, 1381
Hin6I	GCGC	4 cut(s)	298, 300, 1163, 1447
HinP1I	GCGC	4 cut(s)	298, 300, 1163, 1447
HpaII	CCGG	7 cut(s)	80, 219, 229, 272, 303, 319, 388
HphI	GGTGA	5 cut(s)	87, 533, 907, 1187, 1193
Hpy188III	TCNNGA	9 cut(s)	56, 170, 436, 509, 615, 663, 744, 1478, 1511
Hpy99I	CGWCG	4 cut(s)	42, 120, 249, 356
HpyCH4III	ACNGT	4 cut(s)	22, 116, 671, 1197
HpyCH4V	TGCA	4 cut(s)	539, 1193, 1250, 1432
HpyF10VI	GCNNNNNNNGC	7 cut(s)	117, 126, 367, 400, 454, 1222, 1444
HpyF3I	CTNAG	5 cut(s)	410, 642, 1071, 1166, 1356
Hsp92I	GRCGYC	1 cut(s)	446
Hsp92II	CATG	2 cut(s)	29, 1381
HspAI	GCGC	4 cut(s)	298, 300, 1163, 1447
Ksp22I	TGATCA	1 cut(s)	52
Kzo9I	GATC	4 cut(s)	52, 721, 1480, 1507
LguI	GCTCTTC	1 cut(s)	761
LmnI	GCTCC	4 cut(s)	358, 804, 1012, 1160
Lsp1109I	GCAGC	3 cut(s)	132, 819, 1444
LweI	GCATC	3 cut(s)	526, 970, 1174
MabI	ACCWGGT	1 cut(s)	1341
MaeI	CTAG	7 cut(s)	180, 186, 255, 744, 750, 998, 1131
MaeIII	GTNAC	2 cut(s)	68, 442
MalI	GATC	4 cut(s)	54, 723, 1482, 1509
MboI	GATC	4 cut(s)	52, 721, 1480, 1507
MflI	RGATCY	1 cut(s)	1507
MhlI	GDGCHC	2 cut(s)	455, 1413
MlsI	TGGCCA	2 cut(s)	334, 1376
MluCI	AATT	3 cut(s)	482, 548, 1049
MluNI	TGGCCA	2 cut(s)	334, 1376
MlyI	GAGTC	4 cut(s)	284, 356, 587, 713
MmeI	TCCRAC	3 cut(s)	216, 285, 375
Mox20I	TGGCCA	2 cut(s)	334, 1376
MscI	TGGCCA	2 cut(s)	334, 1376
MseI	TTAA	1 cut(s)	1383
Msp20I	TGGCCA	2 cut(s)	334, 1376
MspA1I	CMGCKG	1 cut(s)	1435
MspI	CCGG	7 cut(s)	80, 219, 229, 272, 303, 319, 388
MspR9I	CCNGG	5 cut(s)	220, 286, 304, 1173, 1343
Mva1269I	GAATGC	1 cut(s)	1321
MvaI	CCWGG	3 cut(s)	286, 1173, 1343
MvnI	CGCG	3 cut(s)	300, 610, 1225
MwoI	GCNNNNNNNGC	7 cut(s)	117, 126, 367, 400, 454, 1222, 1444
NciI	CCSGG	2 cut(s)	220, 304
NdeII	GATC	4 cut(s)	52, 721, 1480, 1507
NlaIII	CATG	2 cut(s)	29, 1381
NlaIV	GGNNCC	5 cut(s)	317, 1014, 1079, 1304, 1509
NmeAIII	GCCGAG	2 cut(s)	474, 483
NmuCI	GTSAC	2 cut(s)	68, 442
NspV	TTCGAA	1 cut(s)	480
PalAI	GGCGCGCC	1 cut(s)	298
PauI	GCGCGC	1 cut(s)	298
PceI	AGGCCT	4 cut(s)	10, 1043, 1171, 1499
PciSI	GCTCTTC	1 cut(s)	761
PcsI	WCGNNNNNNNCGW	3 cut(s)	43, 477, 540
PctI	GAATGC	1 cut(s)	1321
PinAI	ACCGGT	1 cut(s)	228
PkrI	GCNGC	5 cut(s)	110, 122, 809, 1434, 1437
PleI	GAGTC	4 cut(s)	283, 355, 586, 712
PpsI	GAGTC	4 cut(s)	283, 355, 586, 712
Psp6I	CCWGG	3 cut(s)	284, 1171, 1341
PspFI	CCCAGC	1 cut(s)	125
PspGI	CCWGG	3 cut(s)	284, 1171, 1341
PspN4I	GGNNCC	5 cut(s)	317, 1014, 1079, 1304, 1509
PspPI	GGNCC	7 cut(s)	189, 216, 258, 269, 316, 1115, 1469
PstI	CTGCAG	1 cut(s)	1252
PstNI	CAGNNNCTG	2 cut(s)	409, 1438
PsuI	RGATCY	1 cut(s)	1507
PteI	GCGCGC	1 cut(s)	298
RsaI	GTAC	3 cut(s)	140, 386, 923
RsaNI	GTAC	3 cut(s)	139, 385, 922
SapI	GCTCTTC	1 cut(s)	761
SaqAI	TTAA	1 cut(s)	1383
SatI	GCNGC	5 cut(s)	109, 121, 808, 1433, 1436
Sau3AI	GATC	4 cut(s)	52, 721, 1480, 1507
Sau96I	GGNCC	7 cut(s)	189, 216, 258, 269, 316, 1115, 1469
ScaI	AGTACT	1 cut(s)	923
SchI	GAGTC	4 cut(s)	284, 356, 587, 713
ScrFI	CCNGG	5 cut(s)	220, 286, 304, 1173, 1343
SduI	GDGCHC	2 cut(s)	455, 1413
SexAI	ACCWGGT	1 cut(s)	1341
SfaNI	GCATC	3 cut(s)	526, 970, 1174
SfcI	CTRYAG	1 cut(s)	1248
SfuI	TTCGAA	1 cut(s)	480
SgsI	GGCGCGCC	1 cut(s)	298
SinI	GGWCC	4 cut(s)	189, 258, 316, 1469
SmlI	CTYRAG	1 cut(s)	1064
SmoI	CTYRAG	1 cut(s)	1064
Sse9I	AATT	3 cut(s)	482, 548, 1049
SseBI	AGGCCT	4 cut(s)	10, 1043, 1171, 1499
SspI	AATATT	1 cut(s)	376
SspMI	CTAG	7 cut(s)	180, 186, 255, 744, 750, 998, 1131
StuI	AGGCCT	4 cut(s)	10, 1043, 1171, 1499
StyD4I	CCNGG	5 cut(s)	218, 284, 302, 1171, 1341
StyI	CCWWGG	3 cut(s)	185, 254, 1494
TaaI	ACNGT	4 cut(s)	22, 116, 671, 1197
TaqI	TCGA	7 cut(s)	37, 244, 480, 614, 662, 875, 1002
TaqII	GACCGA	1 cut(s)	200
TasI	AATT	3 cut(s)	482, 548, 1049
TatI	WGTACW	1 cut(s)	921
TauI	GCSGC	2 cut(s)	111, 1438
Tru1I	TTAA	1 cut(s)	1383
Tru9I	TTAA	1 cut(s)	1383
TscAI	CASTG	1 cut(s)	676
TseFI	GTSAC	2 cut(s)	68, 442
TseI	GCWGC	3 cut(s)	120, 807, 1432
Tsp45I	GTSAC	2 cut(s)	68, 442
TspDTI	ATGAA	5 cut(s)	14, 147, 1074, 1116, 1328
TspGWI	ACGGA	4 cut(s)	35, 210, 279, 947
TspRI	CASTG	1 cut(s)	676
VpaK11BI	GGWCC	4 cut(s)	189, 258, 316, 1469
XagI	CCTNNNNNAGG	1 cut(s)	1176
XbaI	TCTAGA	1 cut(s)	743
XmaJI	CCTAGG	2 cut(s)	185, 254
XspI	CTAG	7 cut(s)	180, 186, 255, 744, 750, 998, 1131
ZrmI	AGTACT	1 cut(s)	923

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.