FvH4_2g12100

phosphotransferase activity, carboxyl group as acceptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0002381
Physical Location & Seq
Reverse (-)
10587717 .. 10589431
1715 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g12100.t1

Sequence Viewer

Length: 378 bp
ATGTCTCAGGTTACCTGGAAGCTATTAACCTTGCTGCAAGTTTGTGAAAAGCTTAGTGGTGAAGAGACAGACAAAAATTCTCTTGTCAATAAAGAGAAGTCCGGTCCGGAACCAATAATTATACCTATAGTTCTGAAAATGGCTGAATTTGATCATAAGGATAAAGATAAACTAATAAGCAACTTAAAGACCATCCAAGACTATCTTTGCTCATTCAATTCTCAGGGATTGACAGTAGTCAATATATCAGCAACAACATTCCCACAAACATTGGATTGGCTGCACGGATATCTTCTTGAGTGTATTGAGCATGGTATTTCATCTGTGTCGCTGAAAAGTAGATTGCATTCAGGATTTTTAGCTCAAGGCAGGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_18

Protein Analysis

126

Amino Acids

14.07

Weight (kDa)

6.4

Isoelectric Point (pI)

38.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 360
AccIII TCCGGA 1 cut(s) 106
AcsI RAATTY 2 cut(s) 76, 146
AgsI TTSAA 1 cut(s) 217
AjnI CCWGG 1 cut(s) 14
AluBI AGCT 3 cut(s) 22, 52, 362
AluI AGCT 3 cut(s) 22, 52, 362
Alw26I GTCTC 2 cut(s) 9, 59
Aor13HI TCCGGA 1 cut(s) 106
ApeKI GCWGC 2 cut(s) 34, 280
ApoI RAATTY 2 cut(s) 76, 146
AspS9I GGNCC 1 cut(s) 104
AsuHPI GGTGA 1 cut(s) 71
AvaII GGWCC 1 cut(s) 104
BbvI GCAGC 2 cut(s) 21, 267
BccI CCATC 1 cut(s) 200
BciT130I CCWGG 1 cut(s) 16
BclI TGATCA 1 cut(s) 151
BcoDI GTCTC 2 cut(s) 9, 59
BfmI CTRYAG 1 cut(s) 126
BfuAI ACCTGC 1 cut(s) 360
BisI GCNGC 2 cut(s) 35, 281
BlsI GCNGC 2 cut(s) 36, 282
Bme1390I CCNGG 1 cut(s) 16
Bme18I GGWCC 1 cut(s) 104
BmgT120I GGNCC 1 cut(s) 104
BmiI GGNNCC 1 cut(s) 111
BmrFI CCNGG 1 cut(s) 16
BoxI GACNNNNGTC 1 cut(s) 236
BpuEI CTTGAG 2 cut(s) 317, 348
BsaWI WCCGGW 2 cut(s) 101, 106
BseAI TCCGGA 1 cut(s) 106
BseBI CCWGG 1 cut(s) 16
BseGI GGATG 1 cut(s) 192
BseMII CTCAG 2 cut(s) 20, 236
BseXI GCAGC 2 cut(s) 21, 267
BsgI GTGCAG 1 cut(s) 266
BsiSI CCGG 2 cut(s) 102, 107
BsmAI GTCTC 2 cut(s) 9, 59
BsmI GAATGC 1 cut(s) 346
Bsp13I TCCGGA 1 cut(s) 106
Bsp143I GATC 1 cut(s) 151
BspCNI CTCAG 2 cut(s) 19, 235
BspEI TCCGGA 1 cut(s) 106
BspLI GGNNCC 1 cut(s) 111
BspMI ACCTGC 1 cut(s) 360
BssMI GATC 1 cut(s) 151
Bst2UI CCWGG 1 cut(s) 16
Bst4CI ACNGT 1 cut(s) 235
Bst6I CTCTTC 1 cut(s) 57
BstDEI CTNAG 3 cut(s) 6, 53, 222
BstEII GGTNACC 1 cut(s) 10
BstF5I GGATG 1 cut(s) 192
BstKTI GATC 1 cut(s) 154
BstMAI GTCTC 2 cut(s) 9, 59
BstMBI GATC 1 cut(s) 151
BstNI CCWGG 1 cut(s) 16
BstPAI GACNNNNGTC 1 cut(s) 236
BstPI GGTNACC 1 cut(s) 10
BstSCI CCNGG 1 cut(s) 14
BstSFI CTRYAG 1 cut(s) 126
BstV1I GCAGC 2 cut(s) 21, 267
BtsCI GGATG 1 cut(s) 192
BveI ACCTGC 1 cut(s) 360
Cfr13I GGNCC 1 cut(s) 104
CpoI CGGWCCG 1 cut(s) 104
CspCI CAANNNNNGTGG 2 cut(s) 252, 287
CspI CGGWCCG 1 cut(s) 104
CviAII CATG 1 cut(s) 311
CviJI RGCY 5 cut(s) 22, 52, 143, 280, 362
CviKI_1 RGCY 5 cut(s) 22, 52, 143, 280, 362
DdeI CTNAG 3 cut(s) 6, 53, 222
DpnI GATC 1 cut(s) 153
DpnII GATC 1 cut(s) 151
Eam1104I CTCTTC 1 cut(s) 57
EarI CTCTTC 1 cut(s) 57
Eco32I GATATC 1 cut(s) 290
Eco47I GGWCC 1 cut(s) 104
Eco91I GGTNACC 1 cut(s) 10
EcoO65I GGTNACC 1 cut(s) 10
EcoRII CCWGG 1 cut(s) 14
EcoRV GATATC 1 cut(s) 290
FaeI CATG 1 cut(s) 314
FaiI YATR 5 cut(s) 122, 128, 156, 245, 312
FalI AAGNNNNNCTT 2 cut(s) 189, 221
FatI CATG 1 cut(s) 310
FbaI TGATCA 1 cut(s) 151
Fnu4HI GCNGC 2 cut(s) 35, 281
FokI GGATG 1 cut(s) 179
Fsp4HI GCNGC 2 cut(s) 35, 281
GluI GCNGC 2 cut(s) 35, 281
HapII CCGG 2 cut(s) 102, 107
Hin1II CATG 1 cut(s) 314
HindIII AAGCTT 1 cut(s) 50
HpaII CCGG 2 cut(s) 102, 107
HphI GGTGA 1 cut(s) 71
Hpy188I TCNGA 1 cut(s) 135
Hpy188III TCNNGA 3 cut(s) 107, 296, 351
HpyCH4III ACNGT 1 cut(s) 235
HpyCH4V TGCA 3 cut(s) 37, 283, 346
HpyF3I CTNAG 3 cut(s) 6, 53, 222
Hsp92II CATG 1 cut(s) 314
Kpn2I TCCGGA 1 cut(s) 106
Ksp22I TGATCA 1 cut(s) 151
Kzo9I GATC 1 cut(s) 151
LpnPI CCDG 6 cut(s) 28, 115, 120, 209, 336, 355
Lsp1109I GCAGC 2 cut(s) 21, 267
MaeIII GTNAC 1 cut(s) 10
MalI GATC 1 cut(s) 153
MboI GATC 1 cut(s) 151
MboII GAAGA 2 cut(s) 74, 284
MluCI AATT 4 cut(s) 76, 117, 146, 217
MroI TCCGGA 1 cut(s) 106
MseI TTAA 2 cut(s) 26, 185
MspI CCGG 2 cut(s) 102, 107
MspR9I CCNGG 1 cut(s) 16
Mva1269I GAATGC 1 cut(s) 346
MvaI CCWGG 1 cut(s) 16
NdeII GATC 1 cut(s) 151
NlaIII CATG 1 cut(s) 314
NlaIV GGNNCC 1 cut(s) 111
PctI GAATGC 1 cut(s) 346
PkrI GCNGC 2 cut(s) 36, 282
PshAI GACNNNNGTC 1 cut(s) 236
Psp6I CCWGG 1 cut(s) 14
PspEI GGTNACC 1 cut(s) 10
PspGI CCWGG 1 cut(s) 14
PspN4I GGNNCC 1 cut(s) 111
PspPI GGNCC 1 cut(s) 104
Rsr2I CGGWCCG 1 cut(s) 104
RsrII CGGWCCG 1 cut(s) 104
SaqAI TTAA 2 cut(s) 26, 185
SatI GCNGC 2 cut(s) 35, 281
Sau3AI GATC 1 cut(s) 151
Sau96I GGNCC 1 cut(s) 104
ScrFI CCNGG 1 cut(s) 16
SetI ASST 8 cut(s) 12, 17, 24, 32, 54, 127, 364, 374
SfcI CTRYAG 1 cut(s) 126
SinI GGWCC 1 cut(s) 104
SmlI CTYRAG 2 cut(s) 296, 363
SmoI CTYRAG 2 cut(s) 296, 363
Sse9I AATT 4 cut(s) 76, 117, 146, 217
StyD4I CCNGG 1 cut(s) 14
TaaI ACNGT 1 cut(s) 235
TasI AATT 4 cut(s) 76, 117, 146, 217
Tru1I TTAA 2 cut(s) 26, 185
Tru9I TTAA 2 cut(s) 26, 185
TseI GCWGC 2 cut(s) 34, 280
TspDTI ATGAA 1 cut(s) 309
TspGWI ACGGA 1 cut(s) 300
VpaK11BI GGWCC 1 cut(s) 104
XapI RAATTY 2 cut(s) 76, 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.