RchiOBHm_Chr1g0374151

phosphotransferase activity, carboxyl group as acceptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0002381
Physical Location & Seq
Forward (+)
62070322 .. 62072834
2513 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59798

Sequence Viewer

Length: 1053 bp
ATGGGTCGTGAAATAAAGCATGGTTCCTCCAAATACGACTATGTCAAGGTTAAGGTGTGGCTGGGTGATCATGCCGAGCACTACTACGTGTTTTCCAGGTTTTTACTCAGCCAAAATTTAACTGTCACCAAGATTCCAAATCATATATCTATCAAAATCGCTCTTGATCTCAAGAAGCTACTCGTAGACAACAGCCTTCTAGATGTCTCGCAGTCTGATTTGGAAGAGAATCTGTTTAAGATTATGGAGCAAAGGGGTTTTGGGGAAGATTACGTAAAGCGTTACCGGATGATGACCAGATTTCACCATCAACGAGTGCCATTAGTTATTATTGTGTGTGGAACTTCCTGTGTTGGAAAGTCCACTATTGCTGCCCAAATTTCACAAAGGTTCAATTTGCCTAATGTCATGCAGACAGATGTGGTGTACGAATTGCTGCGCACATCGACAGATGCACCACTGGCCTCCACTCCGATATGGGCACGAGACTTCAGCTCCTCTGAAGAGTTGATTACTGAATTTTGTAGAGAATGCCGGGTTGTTCGAAAAGGTTTGGCTGGTGATTTGAAGAAAGCACTGAAAGATGGAAAGCCAATAATAATAGAGGGGATACATTTGGATCCAAACATTTTTTTAATGTATGAAGAAAAGAGCCACTCACCGGATCTGAACTCTAGTACCGATCAGCATGTCAGCTCAGAAAAAGGGAAGGGTGTTTCTGAGAATAAAGGTGAAAATGTTAAGGGTCCTGACCCAATAATTATACCTCTGATTTTGAATATGGCTCAATTTGAGCACCAGGCATTGCTAGAGGAGTGGTTCTCTTCTTGCACATGTAGTGATAAATGGCAAGTCCAGGATAGAGATAAGCTGACAAGCAATGTGAAGATGATTCAGGACTATCTTCACTCATTTGATTCAAAGGGACTGACAGTTCTCAACCTATCAGCAGCCACATTTGCTCAAACACTAGATTGGCTGCACGGATATATTCTTGAGCGTATTGAGCAGGGCATGCGATCAGCGTCCAACGAAAATGGCTGGTTTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_18

Protein Analysis

350

Amino Acids

39.92

Weight (kDa)

6.32

Isoelectric Point (pI)

34.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_18 PF13238 110 - 207 6.8e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 440
AccI GTMKAC 1 cut(s) 186
AclWI GGATC 3 cut(s) 614, 627, 672
AcsI RAATTY 3 cut(s) 115, 378, 518
AcuI CTGAAG 2 cut(s) 475, 522
AfaI GTAC 2 cut(s) 428, 679
AfiI CCNNNNNNNGG 1 cut(s) 661
AflIII ACRYGT 2 cut(s) 87, 833
AgsI TTSAA 4 cut(s) 394, 568, 778, 921
AjnI CCWGG 3 cut(s) 95, 798, 855
AloI GAACNNNNNNTCC 2 cut(s) 918, 950
AluBI AGCT 4 cut(s) 178, 495, 696, 871
AluI AGCT 4 cut(s) 178, 495, 696, 871
Alw21I GWGCWC 2 cut(s) 81, 798
Alw26I GTCTC 2 cut(s) 211, 480
AlwI GGATC 3 cut(s) 614, 627, 672
AoxI GGCC 1 cut(s) 462
ApeKI GCWGC 4 cut(s) 371, 436, 950, 979
ApoI RAATTY 3 cut(s) 115, 378, 518
AspLEI GCGC 1 cut(s) 441
AspS9I GGNCC 1 cut(s) 746
AsuC2I CCSGG 1 cut(s) 536
AsuHPI GGTGA 6 cut(s) 77, 118, 296, 572, 651, 743
AsuII TTCGAA 1 cut(s) 544
AvaII GGWCC 1 cut(s) 746
BaeGI GKGCMC 1 cut(s) 484
BaeI ACNNNNGTAYC 2 cut(s) 661, 694
BamHI GGATCC 1 cut(s) 619
BauI CACGAG 1 cut(s) 483
Bbv12I GWGCWC 2 cut(s) 81, 798
BbvI GCAGC 4 cut(s) 358, 423, 962, 966
BccI CCATC 2 cut(s) 315, 578
BciT130I CCWGG 3 cut(s) 97, 800, 857
BciVI GTATCC 1 cut(s) 603
BclI TGATCA 1 cut(s) 67
BcnI CCSGG 1 cut(s) 536
BcoDI GTCTC 2 cut(s) 211, 480
BfaI CTAG 4 cut(s) 200, 675, 809, 971
BfuI GTATCC 1 cut(s) 603
BisI GCNGC 4 cut(s) 372, 437, 951, 980
BlsI GCNGC 4 cut(s) 373, 438, 952, 981
Bme1390I CCNGG 4 cut(s) 97, 536, 800, 857
Bme18I GGWCC 1 cut(s) 746
BmgT120I GGNCC 1 cut(s) 746
BmiI GGNNCC 3 cut(s) 25, 621, 747
BmrFI CCNGG 4 cut(s) 97, 536, 800, 857
BmsI GCATC 1 cut(s) 442
BplI GAGNNNNNCTC 2 cut(s) 806, 838
Bpu14I TTCGAA 1 cut(s) 544
BpuEI CTTGAG 2 cut(s) 155, 1016
BpuMI CCSGG 1 cut(s) 536
BsaAI YACGTR 2 cut(s) 88, 274
BsaWI WCCGGW 2 cut(s) 285, 661
BsaXI ACNNNNNCTCC 2 cut(s) 479, 509
Bsc4I CCNNNNNNNGG 1 cut(s) 661
Bse1I ACTGG 1 cut(s) 465
Bse3DI GCAATG 2 cut(s) 803, 886
BseBI CCWGG 3 cut(s) 97, 800, 857
BseGI GGATG 1 cut(s) 294
BseLI CCNNNNNNNGG 1 cut(s) 661
BseMI GCAATG 2 cut(s) 803, 886
BseMII CTCAG 3 cut(s) 121, 711, 711
BseNI ACTGG 1 cut(s) 465
BseRI GAGGAG 2 cut(s) 487, 827
BseSI GKGCMC 1 cut(s) 484
BseXI GCAGC 4 cut(s) 358, 423, 962, 966
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 1 cut(s) 965
BshFI GGCC 1 cut(s) 464
BsiHKAI GWGCWC 2 cut(s) 81, 798
BsiSI CCGG 3 cut(s) 286, 535, 662
BslFI GGGAC 1 cut(s) 939
BslI CCNNNNNNNGG 1 cut(s) 661
BsmAI GTCTC 2 cut(s) 211, 480
BsmFI GGGAC 1 cut(s) 939
BsmI GAATGC 1 cut(s) 536
BsnI GGCC 1 cut(s) 464
Bsp119I TTCGAA 1 cut(s) 544
Bsp1286I GDGCHC 3 cut(s) 81, 484, 798
Bsp143I GATC 6 cut(s) 67, 166, 619, 664, 682, 1019
BspANI GGCC 1 cut(s) 464
BspCNI CTCAG 3 cut(s) 120, 710, 712
BspLI GGNNCC 3 cut(s) 25, 621, 747
BspPI GGATC 3 cut(s) 614, 627, 672
BspT104I TTCGAA 1 cut(s) 544
BsrDI GCAATG 2 cut(s) 803, 886
BsrI ACTGG 1 cut(s) 465
BssMI GATC 6 cut(s) 67, 166, 619, 664, 682, 1019
BssSI CACGAG 1 cut(s) 483
Bst2BI CACGAG 1 cut(s) 483
Bst2UI CCWGG 3 cut(s) 97, 800, 857
Bst4CI ACNGT 2 cut(s) 124, 934
Bst6I CTCTTC 3 cut(s) 219, 498, 829
BstAPI GCANNNNNTGC 1 cut(s) 1015
BstBAI YACGTR 2 cut(s) 88, 274
BstBI TTCGAA 1 cut(s) 544
BstC8I GCNNGC 1 cut(s) 1016
BstDEI CTNAG 3 cut(s) 107, 697, 720
BstF5I GGATG 1 cut(s) 294
BstHHI GCGC 1 cut(s) 441
BstKTI GATC 6 cut(s) 70, 169, 622, 667, 685, 1022
BstMAI GTCTC 2 cut(s) 211, 480
BstMBI GATC 6 cut(s) 67, 166, 619, 664, 682, 1019
BstMWI GCNNNNNNNGC 4 cut(s) 461, 959, 1006, 1015
BstNI CCWGG 3 cut(s) 97, 800, 857
BstNSI RCATGY 3 cut(s) 692, 837, 1018
BstSCI CCNGG 4 cut(s) 95, 534, 798, 855
BstSLI GKGCMC 1 cut(s) 484
BstSNI TACGTA 1 cut(s) 274
BstV1I GCAGC 4 cut(s) 358, 423, 962, 966
BstX2I RGATCY 2 cut(s) 619, 664
BstYI RGATCY 2 cut(s) 619, 664
BsuI GTATCC 1 cut(s) 603
BsuRI GGCC 1 cut(s) 464
BtsCI GGATG 1 cut(s) 294
BtsIMutI CAGTG 2 cut(s) 458, 575
Cac8I GCNNGC 1 cut(s) 1016
CfoI GCGC 1 cut(s) 441
Cfr13I GGNCC 1 cut(s) 746
CseI GACGC 1 cut(s) 1014
Csp6I GTAC 2 cut(s) 427, 678
CviAII CATG 6 cut(s) 20, 71, 409, 689, 834, 1015
CviQI GTAC 2 cut(s) 427, 678
DdeI CTNAG 3 cut(s) 107, 697, 720
DpnI GATC 6 cut(s) 69, 168, 621, 666, 684, 1021
DpnII GATC 6 cut(s) 67, 166, 619, 664, 682, 1019
Eam1104I CTCTTC 3 cut(s) 219, 498, 829
EarI CTCTTC 3 cut(s) 219, 498, 829
Eco105I TACGTA 1 cut(s) 274
Eco47I GGWCC 1 cut(s) 746
Eco57I CTGAAG 2 cut(s) 475, 522
EcoO109I RGGNCCY 1 cut(s) 746
EcoRII CCWGG 3 cut(s) 95, 798, 855
FaeI CATG 6 cut(s) 23, 74, 412, 692, 837, 1018
FaqI GGGAC 1 cut(s) 939
FatI CATG 6 cut(s) 19, 70, 408, 688, 833, 1014
FbaI TGATCA 1 cut(s) 67
FblI GTMKAC 1 cut(s) 186
Fnu4HI GCNGC 4 cut(s) 372, 437, 951, 980
FokI GGATG 1 cut(s) 301
Fsp4HI GCNGC 4 cut(s) 372, 437, 951, 980
FspBI CTAG 4 cut(s) 200, 675, 809, 971
FspI TGCGCA 1 cut(s) 440
GlaI GCGC 1 cut(s) 440
GluI GCNGC 4 cut(s) 372, 437, 951, 980
GsaI CCCAGC 1 cut(s) 65
HaeIII GGCC 1 cut(s) 464
HapII CCGG 3 cut(s) 286, 535, 662
HgaI GACGC 1 cut(s) 1014
HhaI GCGC 1 cut(s) 441
Hin1II CATG 6 cut(s) 23, 74, 412, 692, 837, 1018
Hin6I GCGC 1 cut(s) 439
HinP1I GCGC 1 cut(s) 439
HinfI GANTC 4 cut(s) 133, 229, 892, 917
HpaII CCGG 3 cut(s) 286, 535, 662
HphI GGTGA 6 cut(s) 77, 118, 296, 572, 651, 743
Hpy166II GTNNAC 3 cut(s) 187, 363, 427
Hpy188I TCNGA 7 cut(s) 217, 474, 502, 669, 700, 721, 771
Hpy188III TCNNGA 7 cut(s) 8, 164, 172, 200, 749, 896, 995
Hpy8I GTNNAC 3 cut(s) 187, 363, 427
HpyAV CCTTC 2 cut(s) 206, 703
HpyCH4III ACNGT 2 cut(s) 124, 934
HpyCH4IV ACGT 2 cut(s) 87, 273
HpyCH4V TGCA 4 cut(s) 412, 455, 831, 982
HpyF10VI GCNNNNNNNGC 4 cut(s) 461, 959, 1006, 1015
HpyF3I CTNAG 3 cut(s) 107, 697, 720
HpySE526I ACGT 2 cut(s) 87, 273
Hsp92II CATG 6 cut(s) 23, 74, 412, 692, 837, 1018
HspAI GCGC 1 cut(s) 439
Ksp22I TGATCA 1 cut(s) 67
Kzo9I GATC 6 cut(s) 67, 166, 619, 664, 682, 1019
LmnI GCTCC 2 cut(s) 247, 500
Lsp1109I GCAGC 4 cut(s) 358, 423, 962, 966
LweI GCATC 1 cut(s) 442
MaeI CTAG 4 cut(s) 200, 675, 809, 971
MaeII ACGT 2 cut(s) 87, 273
MaeIII GTNAC 2 cut(s) 124, 281
MalI GATC 6 cut(s) 69, 168, 621, 666, 684, 1021
MboI GATC 6 cut(s) 67, 166, 619, 664, 682, 1019
MboII GAAGA 8 cut(s) 236, 278, 515, 580, 656, 816, 896, 898
MflI RGATCY 2 cut(s) 619, 664
MhlI GDGCHC 3 cut(s) 81, 484, 798
MluCI AATT 7 cut(s) 115, 378, 394, 431, 518, 759, 788
MmeI TCCRAC 2 cut(s) 334, 1053
MnlI CCTC 6 cut(s) 37, 475, 508, 598, 777, 805
MseI TTAA 5 cut(s) 51, 119, 237, 635, 741
MspI CCGG 3 cut(s) 286, 535, 662
MspR9I CCNGG 4 cut(s) 97, 536, 800, 857
Mva1269I GAATGC 1 cut(s) 536
MvaI CCWGG 3 cut(s) 97, 800, 857
MwoI GCNNNNNNNGC 4 cut(s) 461, 959, 1006, 1015
NciI CCSGG 1 cut(s) 536
NdeII GATC 6 cut(s) 67, 166, 619, 664, 682, 1019
NlaIII CATG 6 cut(s) 23, 74, 412, 692, 837, 1018
NlaIV GGNNCC 3 cut(s) 25, 621, 747
NmeAIII GCCGAG 1 cut(s) 100
NmuCI GTSAC 1 cut(s) 124
NsbI TGCGCA 1 cut(s) 440
NspI RCATGY 3 cut(s) 692, 837, 1018
NspV TTCGAA 1 cut(s) 544
PaeI GCATGC 1 cut(s) 1018
PciI ACATGT 1 cut(s) 833
PctI GAATGC 1 cut(s) 536
PfeI GAWTC 4 cut(s) 133, 229, 892, 917
PflFI GACNNNGTC 1 cut(s) 41
PfoI TCCNGGA 1 cut(s) 855
PkrI GCNGC 4 cut(s) 373, 438, 952, 981
Ppu21I YACGTR 2 cut(s) 88, 274
PpuMI RGGWCCY 1 cut(s) 746
PscI ACATGT 1 cut(s) 833
Psp5II RGGWCCY 1 cut(s) 746
Psp6I CCWGG 3 cut(s) 95, 798, 855
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 3 cut(s) 95, 798, 855
PspN4I GGNNCC 3 cut(s) 25, 621, 747
PspPI GGNCC 1 cut(s) 746
PspPPI RGGWCCY 1 cut(s) 746
PsuI RGATCY 2 cut(s) 619, 664
PsyI GACNNNGTC 1 cut(s) 41
RsaI GTAC 2 cut(s) 428, 679
RsaNI GTAC 2 cut(s) 427, 678
SaqAI TTAA 5 cut(s) 51, 119, 237, 635, 741
SatI GCNGC 4 cut(s) 372, 437, 951, 980
Sau3AI GATC 6 cut(s) 67, 166, 619, 664, 682, 1019
Sau96I GGNCC 1 cut(s) 746
ScrFI CCNGG 4 cut(s) 97, 536, 800, 857
SduI GDGCHC 3 cut(s) 81, 484, 798
SfaNI GCATC 1 cut(s) 442
SfuI TTCGAA 1 cut(s) 544
SinI GGWCC 1 cut(s) 746
SmlI CTYRAG 2 cut(s) 170, 995
SmoI CTYRAG 2 cut(s) 170, 995
SnaBI TACGTA 1 cut(s) 274
SphI GCATGC 1 cut(s) 1018
Sse9I AATT 7 cut(s) 115, 378, 394, 431, 518, 759, 788
SspMI CTAG 4 cut(s) 200, 675, 809, 971
StyD4I CCNGG 4 cut(s) 95, 534, 798, 855
TaaI ACNGT 2 cut(s) 124, 934
TaiI ACGT 2 cut(s) 90, 276
TaqI TCGA 2 cut(s) 446, 544
TasI AATT 7 cut(s) 115, 378, 394, 431, 518, 759, 788
TfiI GAWTC 4 cut(s) 133, 229, 892, 917
Tru1I TTAA 5 cut(s) 51, 119, 237, 635, 741
Tru9I TTAA 5 cut(s) 51, 119, 237, 635, 741
TscAI CASTG 2 cut(s) 465, 582
TseFI GTSAC 1 cut(s) 124
TseI GCWGC 4 cut(s) 371, 436, 950, 979
Tsp45I GTSAC 1 cut(s) 124
TspDTI ATGAA 1 cut(s) 657
TspGWI ACGGA 1 cut(s) 999
TspRI CASTG 2 cut(s) 465, 582
Tth111I GACNNNGTC 1 cut(s) 41
VpaK11BI GGWCC 1 cut(s) 746
XapI RAATTY 3 cut(s) 115, 378, 518
XbaI TCTAGA 1 cut(s) 199
XceI RCATGY 3 cut(s) 692, 837, 1018
XmiI GTMKAC 1 cut(s) 186
XspI CTAG 4 cut(s) 200, 675, 809, 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.