Rh1BG356100

phosphotransferase activity, carboxyl group as acceptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0002381
Physical Location & Seq
Forward (+)
48724359 .. 48726584
2226 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG356100.1

Sequence Viewer

Length: 1116 bp
ATGGGTCGTGAAATAAAGCACGGTTCCTCCAAATACGACTATGTCAAGGTGAAGGTGTGGCTGGGTGATCATGCCGAGCACTACTACGTGTTTTCCAGGTTTCTACTCAGCCAAAATTTAACTGTCACCAAGATTCCAAATCATATATCTATCAAAATCGCTCTTGATCTCAAGAAGCTACTCGTAGACAACAGCCTTCTAGATGTCTCGCAGTCGGATTTGGAAGAGAATCTGTTTAAGATTATGGAGCAAAGGGGTTTTGGGGAAGATTACGTAAAGCGTTACCGGATGATGACCAGATTTCACCATCAACGAGTGCCATTAGTTATTATTGTGTGCGGAACTTCCTGTGTTGGAAAGTCCACCATTGCTGCCCAAATTTCACAAAGGTTCAATTTGCCTAATGTCATGCAGACAGACGTGGTGTACGAATTGCTGCGCACATCGACAGATGCACCATTGGCCTCCACTCCGATATGGGCACGAGACTTCAGCTCCTCCGAAGAGTTGATTACTGAATTTTGTAGAGAATGCCGGGTTGTTCGAAAAGGTTTGGCTGGTGATTTGAAGAAAGCACTGAAAGATGGAAAGCCAATAATAATAGAGGGGATACATTTGGATCCAAACATTTTTTTAATGTATGAAGAAAAGAGCCACTCACCGGATCTGAACTCTAGTACCGATCAGCATGTCTGCTCAGAAAAAGGGAAGGCACCGGCAAGTGTTTCTGAGAAGAAGAAAGGTGAAAATGTTAAGGGTCCTGACCCAATAATTATACCTCTGATTTTGAATATGGCTGAATTTGAGCACCAGGCATTGCTAGAGGAGTGGTTCTCTTCTTGCACATGCAGTGATAAATGGCAAGTCCAGGATAGAGATAAGCTGATAAGCAATGTGAAGATGATTCAGGACTATCTTCACTCATTTGATTCAAAGGTAGGTATCGTGTCTGAACTCTCCAGGTACTTTCTGATTCGCTTTATCTTTGAAATGGCTGGTGTTTATCCATGGTTATCTTATTATGTCATTCCTATACTATCAGGGACTGACAGTTCTCAACCTATCAGCAGCCACATTCGCTCAAACACTAGATTGGCTGCACGGATATATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_18

Protein Analysis

371

Amino Acids

42.38

Weight (kDa)

7.64

Isoelectric Point (pI)

36.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_18 PF13238 110 - 207 7.8e-06 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 440
AccB1I GGYRCC 1 cut(s) 712
AccI GTMKAC 1 cut(s) 186
AciI CCGC 1 cut(s) 339
AclWI GGATC 3 cut(s) 614, 627, 672
AcsI RAATTY 4 cut(s) 115, 378, 518, 800
AcuI CTGAAG 1 cut(s) 475
AfaI GTAC 3 cut(s) 428, 679, 965
AfiI CCNNNNNNNGG 1 cut(s) 661
AflIII ACRYGT 1 cut(s) 87
AgsI TTSAA 5 cut(s) 394, 568, 790, 933, 989
AjiI CACGTC 1 cut(s) 421
AjnI CCWGG 4 cut(s) 95, 810, 867, 959
AloI GAACNNNNNNTCC 2 cut(s) 1036, 1068
AluBI AGCT 3 cut(s) 178, 495, 883
AluI AGCT 3 cut(s) 178, 495, 883
Alw21I GWGCWC 2 cut(s) 81, 810
Alw26I GTCTC 2 cut(s) 211, 480
AlwI GGATC 3 cut(s) 614, 627, 672
AlwNI CAGNNNCTG 1 cut(s) 1046
AoxI GGCC 1 cut(s) 462
ApeKI GCWGC 4 cut(s) 371, 436, 1068, 1097
ApoI RAATTY 4 cut(s) 115, 378, 518, 800
AspLEI GCGC 1 cut(s) 441
AspS9I GGNCC 1 cut(s) 758
AsuC2I CCSGG 1 cut(s) 536
AsuHPI GGTGA 7 cut(s) 61, 77, 118, 296, 572, 651, 755
AsuII TTCGAA 1 cut(s) 544
AvaII GGWCC 1 cut(s) 758
BaeGI GKGCMC 1 cut(s) 484
BaeI ACNNNNGTAYC 2 cut(s) 661, 694
BamHI GGATCC 1 cut(s) 619
BanI GGYRCC 1 cut(s) 712
BauI CACGAG 1 cut(s) 483
Bbv12I GWGCWC 2 cut(s) 81, 810
BbvI GCAGC 4 cut(s) 358, 423, 1080, 1084
BccI CCATC 2 cut(s) 315, 578
BciT130I CCWGG 4 cut(s) 97, 812, 869, 961
BciVI GTATCC 1 cut(s) 603
BclI TGATCA 1 cut(s) 67
BcnI CCSGG 1 cut(s) 536
BcoDI GTCTC 2 cut(s) 211, 480
BfaI CTAG 4 cut(s) 200, 675, 821, 1089
BfuI GTATCC 1 cut(s) 603
BisI GCNGC 4 cut(s) 372, 437, 1069, 1098
BlsI GCNGC 4 cut(s) 373, 438, 1070, 1099
Bme1390I CCNGG 5 cut(s) 97, 536, 812, 869, 961
Bme18I GGWCC 1 cut(s) 758
BmgBI CACGTC 1 cut(s) 421
BmgT120I GGNCC 1 cut(s) 758
BmiI GGNNCC 4 cut(s) 25, 621, 714, 759
BmrFI CCNGG 5 cut(s) 97, 536, 812, 869, 961
BmsI GCATC 1 cut(s) 442
BplI GAGNNNNNCTC 2 cut(s) 818, 850
BpmI CTGGAG 1 cut(s) 943
Bpu14I TTCGAA 1 cut(s) 544
BpuEI CTTGAG 1 cut(s) 155
BpuMI CCSGG 1 cut(s) 536
BsaAI YACGTR 2 cut(s) 88, 274
BsaJI CCNNGG 1 cut(s) 1007
BsaWI WCCGGW 2 cut(s) 285, 661
BsaXI ACNNNNNCTCC 4 cut(s) 11, 41, 479, 509
Bsc4I CCNNNNNNNGG 1 cut(s) 661
Bse118I RCCGGY 1 cut(s) 715
Bse3DI GCAATG 3 cut(s) 366, 815, 898
BseBI CCWGG 4 cut(s) 97, 812, 869, 961
BseDI CCNNGG 1 cut(s) 1007
BseGI GGATG 1 cut(s) 294
BseLI CCNNNNNNNGG 1 cut(s) 661
BseMI GCAATG 3 cut(s) 366, 815, 898
BseMII CTCAG 3 cut(s) 121, 711, 720
BseRI GAGGAG 2 cut(s) 487, 839
BseSI GKGCMC 1 cut(s) 484
BseXI GCAGC 4 cut(s) 358, 423, 1080, 1084
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 1 cut(s) 1083
BshFI GGCC 1 cut(s) 464
BshNI GGYRCC 1 cut(s) 712
BsiHKAI GWGCWC 2 cut(s) 81, 810
BsiSI CCGG 4 cut(s) 286, 535, 662, 716
BslFI GGGAC 1 cut(s) 1057
BslI CCNNNNNNNGG 1 cut(s) 661
BsmAI GTCTC 2 cut(s) 211, 480
BsmFI GGGAC 1 cut(s) 1057
BsmI GAATGC 1 cut(s) 536
BsnI GGCC 1 cut(s) 464
Bsp119I TTCGAA 1 cut(s) 544
Bsp1286I GDGCHC 3 cut(s) 81, 484, 810
Bsp143I GATC 5 cut(s) 67, 166, 619, 664, 682
Bsp19I CCATGG 1 cut(s) 1007
BspACI CCGC 1 cut(s) 339
BspANI GGCC 1 cut(s) 464
BspCNI CTCAG 3 cut(s) 120, 710, 721
BspLI GGNNCC 4 cut(s) 25, 621, 714, 759
BspPI GGATC 3 cut(s) 614, 627, 672
BspT104I TTCGAA 1 cut(s) 544
BspT107I GGYRCC 1 cut(s) 712
BsrDI GCAATG 3 cut(s) 366, 815, 898
BsrFI RCCGGY 1 cut(s) 715
BssAI RCCGGY 1 cut(s) 715
BssECI CCNNGG 1 cut(s) 1007
BssMI GATC 5 cut(s) 67, 166, 619, 664, 682
BssSI CACGAG 1 cut(s) 483
BssT1I CCWWGG 1 cut(s) 1007
Bst2BI CACGAG 1 cut(s) 483
Bst2UI CCWGG 4 cut(s) 97, 812, 869, 961
Bst4CI ACNGT 3 cut(s) 23, 124, 1052
Bst6I CTCTTC 3 cut(s) 219, 498, 841
BstBAI YACGTR 2 cut(s) 88, 274
BstBI TTCGAA 1 cut(s) 544
BstDEI CTNAG 3 cut(s) 107, 697, 729
BstDSI CCRYGG 1 cut(s) 1007
BstF5I GGATG 1 cut(s) 294
BstHHI GCGC 1 cut(s) 441
BstKTI GATC 5 cut(s) 70, 169, 622, 667, 685
BstMAI GTCTC 2 cut(s) 211, 480
BstMBI GATC 5 cut(s) 67, 166, 619, 664, 682
BstMWI GCNNNNNNNGC 2 cut(s) 461, 1077
BstNI CCWGG 4 cut(s) 97, 812, 869, 961
BstNSI RCATGY 2 cut(s) 692, 849
BstSCI CCNGG 5 cut(s) 95, 534, 810, 867, 959
BstSLI GKGCMC 1 cut(s) 484
BstSNI TACGTA 1 cut(s) 274
BstV1I GCAGC 4 cut(s) 358, 423, 1080, 1084
BstX2I RGATCY 2 cut(s) 619, 664
BstYI RGATCY 2 cut(s) 619, 664
BsuI GTATCC 1 cut(s) 603
BsuRI GGCC 1 cut(s) 464
BtgI CCRYGG 1 cut(s) 1007
BtrI CACGTC 1 cut(s) 421
BtsCI GGATG 1 cut(s) 294
BtsI GCAGTG 1 cut(s) 856
BtsIMutI CAGTG 2 cut(s) 575, 856
CaiI CAGNNNCTG 1 cut(s) 1046
CfoI GCGC 1 cut(s) 441
Cfr10I RCCGGY 1 cut(s) 715
Cfr13I GGNCC 1 cut(s) 758
Csp6I GTAC 3 cut(s) 427, 678, 964
CviAII CATG 5 cut(s) 71, 409, 689, 846, 1008
CviQI GTAC 3 cut(s) 427, 678, 964
DdeI CTNAG 3 cut(s) 107, 697, 729
DpnI GATC 5 cut(s) 69, 168, 621, 666, 684
DpnII GATC 5 cut(s) 67, 166, 619, 664, 682
Eam1104I CTCTTC 3 cut(s) 219, 498, 841
EarI CTCTTC 3 cut(s) 219, 498, 841
Eco105I TACGTA 1 cut(s) 274
Eco130I CCWWGG 1 cut(s) 1007
Eco47I GGWCC 1 cut(s) 758
Eco57I CTGAAG 1 cut(s) 475
EcoO109I RGGNCCY 1 cut(s) 758
EcoRII CCWGG 4 cut(s) 95, 810, 867, 959
EcoT14I CCWWGG 1 cut(s) 1007
ErhI CCWWGG 1 cut(s) 1007
FaeI CATG 5 cut(s) 74, 412, 692, 849, 1011
FaqI GGGAC 1 cut(s) 1057
FatI CATG 5 cut(s) 70, 408, 688, 845, 1007
FbaI TGATCA 1 cut(s) 67
FblI GTMKAC 1 cut(s) 186
Fnu4HI GCNGC 4 cut(s) 372, 437, 1069, 1098
FokI GGATG 1 cut(s) 301
Fsp4HI GCNGC 4 cut(s) 372, 437, 1069, 1098
FspBI CTAG 4 cut(s) 200, 675, 821, 1089
FspI TGCGCA 1 cut(s) 440
GlaI GCGC 1 cut(s) 440
GluI GCNGC 4 cut(s) 372, 437, 1069, 1098
GsaI CCCAGC 1 cut(s) 65
GsuI CTGGAG 1 cut(s) 943
HaeIII GGCC 1 cut(s) 464
HapII CCGG 4 cut(s) 286, 535, 662, 716
HhaI GCGC 1 cut(s) 441
Hin1II CATG 5 cut(s) 74, 412, 692, 849, 1011
Hin6I GCGC 1 cut(s) 439
HinP1I GCGC 1 cut(s) 439
HinfI GANTC 5 cut(s) 133, 229, 904, 929, 973
HpaII CCGG 4 cut(s) 286, 535, 662, 716
HphI GGTGA 7 cut(s) 61, 77, 118, 296, 572, 651, 755
Hpy166II GTNNAC 3 cut(s) 187, 363, 427
Hpy188I TCNGA 9 cut(s) 217, 474, 502, 669, 700, 730, 783, 952, 972
Hpy188III TCNNGA 7 cut(s) 8, 164, 172, 200, 761, 908, 1113
Hpy8I GTNNAC 3 cut(s) 187, 363, 427
HpyAV CCTTC 3 cut(s) 46, 206, 703
HpyCH4III ACNGT 3 cut(s) 23, 124, 1052
HpyCH4IV ACGT 3 cut(s) 87, 273, 420
HpyCH4V TGCA 5 cut(s) 412, 455, 843, 849, 1100
HpyF10VI GCNNNNNNNGC 2 cut(s) 461, 1077
HpyF3I CTNAG 3 cut(s) 107, 697, 729
HpySE526I ACGT 3 cut(s) 87, 273, 420
Hsp92II CATG 5 cut(s) 74, 412, 692, 849, 1011
HspAI GCGC 1 cut(s) 439
Ksp22I TGATCA 1 cut(s) 67
Kzo9I GATC 5 cut(s) 67, 166, 619, 664, 682
LmnI GCTCC 2 cut(s) 247, 500
Lsp1109I GCAGC 4 cut(s) 358, 423, 1080, 1084
LweI GCATC 1 cut(s) 442
MaeI CTAG 4 cut(s) 200, 675, 821, 1089
MaeII ACGT 3 cut(s) 87, 273, 420
MaeIII GTNAC 2 cut(s) 124, 281
MalI GATC 5 cut(s) 69, 168, 621, 666, 684
MboI GATC 5 cut(s) 67, 166, 619, 664, 682
MflI RGATCY 2 cut(s) 619, 664
MhlI GDGCHC 3 cut(s) 81, 484, 810
MluCI AATT 7 cut(s) 115, 378, 394, 431, 518, 771, 800
MmeI TCCRAC 2 cut(s) 195, 334
MnlI CCTC 6 cut(s) 37, 475, 508, 598, 789, 817
MseI TTAA 4 cut(s) 119, 237, 635, 753
MspI CCGG 4 cut(s) 286, 535, 662, 716
MspR9I CCNGG 5 cut(s) 97, 536, 812, 869, 961
Mva1269I GAATGC 1 cut(s) 536
MvaI CCWGG 4 cut(s) 97, 812, 869, 961
MwoI GCNNNNNNNGC 2 cut(s) 461, 1077
NciI CCSGG 1 cut(s) 536
NcoI CCATGG 1 cut(s) 1007
NdeII GATC 5 cut(s) 67, 166, 619, 664, 682
NlaIII CATG 5 cut(s) 74, 412, 692, 849, 1011
NlaIV GGNNCC 4 cut(s) 25, 621, 714, 759
NmeAIII GCCGAG 1 cut(s) 100
NmuCI GTSAC 1 cut(s) 124
NsbI TGCGCA 1 cut(s) 440
NspI RCATGY 2 cut(s) 692, 849
NspV TTCGAA 1 cut(s) 544
PcsI WCGNNNNNNNCGW 1 cut(s) 426
PctI GAATGC 1 cut(s) 536
PfeI GAWTC 5 cut(s) 133, 229, 904, 929, 973
PflFI GACNNNGTC 1 cut(s) 41
PfoI TCCNGGA 1 cut(s) 867
PkrI GCNGC 4 cut(s) 373, 438, 1070, 1099
Ppu21I YACGTR 2 cut(s) 88, 274
PpuMI RGGWCCY 1 cut(s) 758
Psp5II RGGWCCY 1 cut(s) 758
Psp6I CCWGG 4 cut(s) 95, 810, 867, 959
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 4 cut(s) 95, 810, 867, 959
PspN4I GGNNCC 4 cut(s) 25, 621, 714, 759
PspPI GGNCC 1 cut(s) 758
PspPPI RGGWCCY 1 cut(s) 758
PstNI CAGNNNCTG 1 cut(s) 1046
PsuI RGATCY 2 cut(s) 619, 664
PsyI GACNNNGTC 1 cut(s) 41
RsaI GTAC 3 cut(s) 428, 679, 965
RsaNI GTAC 3 cut(s) 427, 678, 964
SaqAI TTAA 4 cut(s) 119, 237, 635, 753
SatI GCNGC 4 cut(s) 372, 437, 1069, 1098
Sau3AI GATC 5 cut(s) 67, 166, 619, 664, 682
Sau96I GGNCC 1 cut(s) 758
ScrFI CCNGG 5 cut(s) 97, 536, 812, 869, 961
SduI GDGCHC 3 cut(s) 81, 484, 810
SfaNI GCATC 1 cut(s) 442
SfuI TTCGAA 1 cut(s) 544
SinI GGWCC 1 cut(s) 758
SmlI CTYRAG 1 cut(s) 170
SmoI CTYRAG 1 cut(s) 170
SnaBI TACGTA 1 cut(s) 274
Sse9I AATT 7 cut(s) 115, 378, 394, 431, 518, 771, 800
SsiI CCGC 1 cut(s) 339
SspMI CTAG 4 cut(s) 200, 675, 821, 1089
StyD4I CCNGG 5 cut(s) 95, 534, 810, 867, 959
StyI CCWWGG 1 cut(s) 1007
TaaI ACNGT 3 cut(s) 23, 124, 1052
TaiI ACGT 3 cut(s) 90, 276, 423
TaqI TCGA 2 cut(s) 446, 544
TasI AATT 7 cut(s) 115, 378, 394, 431, 518, 771, 800
TfiI GAWTC 5 cut(s) 133, 229, 904, 929, 973
Tru1I TTAA 4 cut(s) 119, 237, 635, 753
Tru9I TTAA 4 cut(s) 119, 237, 635, 753
TscAI CASTG 2 cut(s) 582, 856
TseFI GTSAC 1 cut(s) 124
TseI GCWGC 4 cut(s) 371, 436, 1068, 1097
Tsp45I GTSAC 1 cut(s) 124
TspDTI ATGAA 1 cut(s) 657
TspRI CASTG 2 cut(s) 582, 856
Tth111I GACNNNGTC 1 cut(s) 41
VpaK11BI GGWCC 1 cut(s) 758
XapI RAATTY 4 cut(s) 115, 378, 518, 800
XbaI TCTAGA 1 cut(s) 199
XceI RCATGY 2 cut(s) 692, 849
XmiI GTMKAC 1 cut(s) 186
XspI CTAG 4 cut(s) 200, 675, 821, 1089
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.