Rorug01G0097400

phosphotransferase activity, carboxyl group as acceptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002381
Physical Location & Seq
Reverse (-)
16137193 .. 16139810
2618 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0097400.1

Sequence Viewer

Length: 873 bp
ATGCATATGGACTTTAAAAATACAAAATTAACATCGAGGAAAGAAAAGAAAAAAGGATGGTATGAAAGTTTTTCTGGATTGCGGACCAGGAAACGACTGAACCCTGAAAAGACTTGTAAATTCCGCCAACAAAAAAGAAAAGAATTTATGAGTATGTTTAGGCGTAATTGCTTGAACGCGTTGAGATCTGTGAGACGTCTCAGCCATCTCGGATTTCGAAATTATGCAAGCTGCGGCTGTGTCGGAGATGCCCCCGCAAAATTTGGGTGTTCGGTTGTGGCCCCGAAAGACCATGTTTATGTGATTGAGCGTTTTGATGAGGACTGGGAGACTCTCATGCCTGGAGAATCAGTGTTCCTGTTTCCCATGATGGATAAAATTGCTCATGTGCTGTGTTCCAACGAGAAGCAGCTTATAGTTCCTGACCACACAGTTTTCACCAACGACCTTTGCCCAGTCACAATTAGTGGTCTGATTTCTCTCAAGATTGAGGATGCTCTGCGGGCCTCGTATCTTCCTGAACATCCTATGGCTACAGCTATTAGGCGTGCCCAGACTGCCATGCGTTCTGCGGTTGGGAGAGTGGCTTATGATAACTTATATCTCGAAACACGATACATCAACAATTTCATATTGGACGAACTCGACAATAGATTCCTCATACTGGGCTTGAGGTGTCTTCAGTTTGATATAAAGCTTCCGCAGGAGGTGCTAGAAGGAATGGATATCCGTGCAGCAGTCAAATGCATCAAACGCATCAAAGGCATCGATGGCGTAATTCTTGATGAGTCTCAGAAAGAAGAGCTACACGGCCTTTACCAAGCCTTGTCAAAGAATGTTGAGGAAACCAGTGGGACATTTGCTGCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_18

Protein Analysis

290

Amino Acids

33.27

Weight (kDa)

9.07

Isoelectric Point (pI)

49.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Band_7 PF01145 93 - 242 5.1e-07 SPFH domain / Band 7 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 199
AccII CGCG 1 cut(s) 179
AciI CCGC 7 cut(s) 82, 124, 234, 255, 502, 572, 701
AcsI RAATTY 3 cut(s) 119, 143, 260
AcuI CTGAAG 1 cut(s) 665
AcyI GRCGYC 1 cut(s) 196
AfiI CCNNNNNNNGG 1 cut(s) 664
AflIII ACRYGT 1 cut(s) 177
AgsI TTSAA 1 cut(s) 175
AjnI CCWGG 2 cut(s) 86, 340
AluBI AGCT 5 cut(s) 231, 412, 539, 697, 805
AluI AGCT 5 cut(s) 231, 412, 539, 697, 805
Alw26I GTCTC 4 cut(s) 187, 203, 323, 795
AoxI GGCC 3 cut(s) 279, 504, 811
ApeKI GCWGC 5 cut(s) 231, 409, 734, 863, 866
ApoI RAATTY 3 cut(s) 119, 143, 260
AspS9I GGNCC 3 cut(s) 84, 280, 504
AsuHPI GGTGA 1 cut(s) 430
AsuII TTCGAA 1 cut(s) 217
AvaII GGWCC 1 cut(s) 84
BaeGI GKGCMC 1 cut(s) 553
BbsI GAAGAC 1 cut(s) 671
BbvI GCAGC 5 cut(s) 218, 421, 746, 850, 853
BccI CCATC 4 cut(s) 51, 213, 364, 764
BceAI ACGGC 1 cut(s) 826
BciT130I CCWGG 2 cut(s) 88, 342
BcoDI GTCTC 4 cut(s) 187, 203, 323, 795
BfaI CTAG 1 cut(s) 713
BfmI CTRYAG 1 cut(s) 534
BglII AGATCT 1 cut(s) 185
BisI GCNGC 6 cut(s) 232, 235, 410, 735, 864, 867
BlsI GCNGC 6 cut(s) 233, 236, 411, 736, 865, 868
Bme1390I CCNGG 2 cut(s) 88, 342
Bme18I GGWCC 1 cut(s) 84
BmgT120I GGNCC 3 cut(s) 84, 280, 504
BmiI GGNNCC 1 cut(s) 282
BmrFI CCNGG 2 cut(s) 88, 342
BmrI ACTGGG 3 cut(s) 334, 449, 674
BmsI GCATC 5 cut(s) 238, 484, 756, 765, 774
BmuI ACTGGG 3 cut(s) 334, 449, 674
BpiI GAAGAC 1 cut(s) 671
BpmI CTGGAG 1 cut(s) 363
Bpu14I TTCGAA 1 cut(s) 217
BpuEI CTTGAG 2 cut(s) 467, 691
Bsa29I ATCGAT 1 cut(s) 768
BsaHI GRCGYC 1 cut(s) 196
BsaXI ACNNNNNCTCC 2 cut(s) 336, 366
Bsc4I CCNNNNNNNGG 1 cut(s) 664
Bse1I ACTGG 4 cut(s) 329, 455, 669, 849
BseBI CCWGG 2 cut(s) 88, 342
BseCI ATCGAT 1 cut(s) 768
BseGI GGATG 3 cut(s) 62, 499, 523
BseLI CCNNNNNNNGG 1 cut(s) 664
BseMII CTCAG 2 cut(s) 214, 806
BseNI ACTGG 4 cut(s) 329, 455, 669, 849
BseSI GKGCMC 1 cut(s) 553
BseXI GCAGC 5 cut(s) 218, 421, 746, 850, 853
BsgI GTGCAG 1 cut(s) 753
Bsh1236I CGCG 1 cut(s) 179
BshFI GGCC 3 cut(s) 281, 506, 813
BshVI ATCGAT 1 cut(s) 768
BslFI GGGAC 1 cut(s) 868
BslI CCNNNNNNNGG 1 cut(s) 664
BsmAI GTCTC 4 cut(s) 187, 203, 323, 795
BsmBI CGTCTC 2 cut(s) 187, 203
BsmFI GGGAC 1 cut(s) 868
BsnI GGCC 3 cut(s) 281, 506, 813
Bsp119I TTCGAA 1 cut(s) 217
Bsp1286I GDGCHC 1 cut(s) 553
Bsp143I GATC 1 cut(s) 185
BspACI CCGC 7 cut(s) 82, 124, 234, 255, 502, 572, 701
BspANI GGCC 3 cut(s) 281, 506, 813
BspCNI CTCAG 2 cut(s) 213, 805
BspDI ATCGAT 1 cut(s) 768
BspFNI CGCG 1 cut(s) 179
BspLI GGNNCC 1 cut(s) 282
BspQI GCTCTTC 1 cut(s) 795
BspT104I TTCGAA 1 cut(s) 217
BsrI ACTGG 4 cut(s) 329, 455, 669, 849
BssMI GATC 1 cut(s) 185
BssNI GRCGYC 1 cut(s) 196
Bst2UI CCWGG 2 cut(s) 88, 342
Bst4CI ACNGT 1 cut(s) 433
Bst6I CTCTTC 1 cut(s) 795
BstACI GRCGYC 1 cut(s) 196
BstAPI GCANNNNNTGC 1 cut(s) 709
BstBI TTCGAA 1 cut(s) 217
BstC8I GCNNGC 3 cut(s) 229, 504, 549
BstDEI CTNAG 2 cut(s) 200, 792
BstF5I GGATG 3 cut(s) 62, 499, 523
BstFNI CGCG 1 cut(s) 179
BstKTI GATC 1 cut(s) 188
BstMAI GTCTC 4 cut(s) 187, 203, 323, 795
BstMBI GATC 1 cut(s) 185
BstMWI GCNNNNNNNGC 6 cut(s) 503, 557, 709, 753, 762, 771
BstNI CCWGG 2 cut(s) 88, 342
BstSCI CCNGG 2 cut(s) 86, 340
BstSFI CTRYAG 1 cut(s) 534
BstSLI GKGCMC 1 cut(s) 553
BstUI CGCG 1 cut(s) 179
BstV1I GCAGC 5 cut(s) 218, 421, 746, 850, 853
BstV2I GAAGAC 1 cut(s) 671
BstX2I RGATCY 1 cut(s) 185
BstYI RGATCY 1 cut(s) 185
Bsu15I ATCGAT 1 cut(s) 768
BsuRI GGCC 3 cut(s) 281, 506, 813
BsuTUI ATCGAT 1 cut(s) 768
BtsCI GGATG 3 cut(s) 62, 499, 523
BtsIMutI CAGTG 2 cut(s) 357, 856
Cac8I GCNNGC 3 cut(s) 229, 504, 549
Cfr13I GGNCC 3 cut(s) 84, 280, 504
ClaI ATCGAT 1 cut(s) 768
CviAII CATG 5 cut(s) 293, 337, 367, 386, 562
DdeI CTNAG 2 cut(s) 200, 792
DpnI GATC 1 cut(s) 187
DpnII GATC 1 cut(s) 185
DraI TTTAAA 1 cut(s) 16
Eam1104I CTCTTC 1 cut(s) 795
EarI CTCTTC 1 cut(s) 795
EciI GGCGGA 1 cut(s) 113
Eco32I GATATC 1 cut(s) 727
Eco47I GGWCC 1 cut(s) 84
Eco57I CTGAAG 1 cut(s) 665
EcoRII CCWGG 2 cut(s) 86, 340
EcoRV GATATC 1 cut(s) 727
EcoT22I ATGCAT 2 cut(s) 6, 749
Esp3I CGTCTC 2 cut(s) 187, 203
FaeI CATG 5 cut(s) 296, 340, 370, 389, 565
FaqI GGGAC 1 cut(s) 868
FatI CATG 5 cut(s) 292, 336, 366, 385, 561
FauI CCCGC 2 cut(s) 262, 495
FauNDI CATATG 1 cut(s) 6
Fnu4HI GCNGC 6 cut(s) 232, 235, 410, 735, 864, 867
FokI GGATG 3 cut(s) 69, 506, 510
Fsp4HI GCNGC 6 cut(s) 232, 235, 410, 735, 864, 867
FspBI CTAG 1 cut(s) 713
GluI GCNGC 6 cut(s) 232, 235, 410, 735, 864, 867
GsuI CTGGAG 1 cut(s) 363
HaeIII GGCC 3 cut(s) 281, 506, 813
Hin1I GRCGYC 1 cut(s) 196
Hin1II CATG 5 cut(s) 296, 340, 370, 389, 565
HindIII AAGCTT 1 cut(s) 695
HinfI GANTC 4 cut(s) 331, 347, 654, 788
HphI GGTGA 1 cut(s) 430
Hpy188I TCNGA 4 cut(s) 212, 245, 474, 795
Hpy188III TCNNGA 6 cut(s) 75, 422, 484, 518, 605, 782
HpyAV CCTTC 1 cut(s) 710
HpyCH4III ACNGT 1 cut(s) 433
HpyCH4IV ACGT 1 cut(s) 196
HpyCH4V TGCA 4 cut(s) 4, 227, 734, 747
HpyF10VI GCNNNNNNNGC 6 cut(s) 503, 557, 709, 753, 762, 771
HpyF3I CTNAG 2 cut(s) 200, 792
HpySE526I ACGT 1 cut(s) 196
Hsp92I GRCGYC 1 cut(s) 196
Hsp92II CATG 5 cut(s) 296, 340, 370, 389, 565
Kzo9I GATC 1 cut(s) 185
LguI GCTCTTC 1 cut(s) 795
Lsp1109I GCAGC 5 cut(s) 218, 421, 746, 850, 853
LweI GCATC 5 cut(s) 238, 484, 756, 765, 774
MaeI CTAG 1 cut(s) 713
MaeII ACGT 1 cut(s) 196
MaeIII GTNAC 1 cut(s) 457
MalI GATC 1 cut(s) 187
MboI GATC 1 cut(s) 185
MboII GAAGA 3 cut(s) 506, 671, 812
MflI RGATCY 1 cut(s) 185
MhlI GDGCHC 1 cut(s) 553
MluI ACGCGT 1 cut(s) 177
MlyI GAGTC 2 cut(s) 325, 797
MmeI TCCRAC 2 cut(s) 223, 423
MnlI CCTC 8 cut(s) 30, 313, 484, 517, 666, 668, 700, 835
Mph1103I ATGCAT 2 cut(s) 6, 749
MseI TTAA 2 cut(s) 15, 29
MslI CAYNNNNRTG 1 cut(s) 297
MspR9I CCNGG 2 cut(s) 88, 342
MvaI CCWGG 2 cut(s) 88, 342
MvnI CGCG 1 cut(s) 179
MwoI GCNNNNNNNGC 6 cut(s) 503, 557, 709, 753, 762, 771
NdeI CATATG 1 cut(s) 6
NdeII GATC 1 cut(s) 185
NlaIII CATG 5 cut(s) 296, 340, 370, 389, 565
NlaIV GGNNCC 1 cut(s) 282
NmuCI GTSAC 1 cut(s) 457
NsiI ATGCAT 2 cut(s) 6, 749
NspV TTCGAA 1 cut(s) 217
PciSI GCTCTTC 1 cut(s) 795
PfeI GAWTC 2 cut(s) 347, 654
PkrI GCNGC 6 cut(s) 233, 236, 411, 736, 865, 868
PleI GAGTC 2 cut(s) 325, 796
PpsI GAGTC 2 cut(s) 325, 796
Psp6I CCWGG 2 cut(s) 86, 340
PspGI CCWGG 2 cut(s) 86, 340
PspN4I GGNNCC 1 cut(s) 282
PspPI GGNCC 3 cut(s) 84, 280, 504
PsuI RGATCY 1 cut(s) 185
RseI CAYNNNNRTG 1 cut(s) 297
SapI GCTCTTC 1 cut(s) 795
SaqAI TTAA 2 cut(s) 15, 29
SatI GCNGC 6 cut(s) 232, 235, 410, 735, 864, 867
Sau3AI GATC 1 cut(s) 185
Sau96I GGNCC 3 cut(s) 84, 280, 504
SchI GAGTC 2 cut(s) 325, 797
ScrFI CCNGG 2 cut(s) 88, 342
SduI GDGCHC 1 cut(s) 553
SetI ASST 9 cut(s) 199, 233, 414, 450, 541, 677, 699, 711, 807
SfaNI GCATC 5 cut(s) 238, 484, 756, 765, 774
SfcI CTRYAG 1 cut(s) 534
SfuI TTCGAA 1 cut(s) 217
SinI GGWCC 1 cut(s) 84
SmiMI CAYNNNNRTG 1 cut(s) 297
SmlI CTYRAG 2 cut(s) 482, 670
SmoI CTYRAG 2 cut(s) 482, 670
SsiI CCGC 7 cut(s) 82, 124, 234, 255, 502, 572, 701
SspMI CTAG 1 cut(s) 713
StyD4I CCNGG 2 cut(s) 86, 340
TaaI ACNGT 1 cut(s) 433
TaiI ACGT 1 cut(s) 199
TaqI TCGA 5 cut(s) 35, 217, 606, 645, 768
TauI GCSGC 1 cut(s) 237
TfiI GAWTC 2 cut(s) 347, 654
Tru1I TTAA 2 cut(s) 15, 29
Tru9I TTAA 2 cut(s) 15, 29
TscAI CASTG 2 cut(s) 357, 856
TseFI GTSAC 1 cut(s) 457
TseI GCWGC 5 cut(s) 231, 409, 734, 863, 866
Tsp45I GTSAC 1 cut(s) 457
TspDTI ATGAA 2 cut(s) 78, 619
TspGWI ACGGA 1 cut(s) 719
TspRI CASTG 2 cut(s) 357, 856
VpaK11BI GGWCC 1 cut(s) 84
XapI RAATTY 3 cut(s) 119, 143, 260
XspI CTAG 1 cut(s) 713
ZraI GACGTC 1 cut(s) 197
Zsp2I ATGCAT 2 cut(s) 6, 749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.