FvH4_7g05310

phosphotransferase activity, carboxyl group as acceptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0002381
Physical Location & Seq
Forward (+)
5618275 .. 5627923
9649 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g05310.t4

Sequence Viewer

Length: 1272 bp
ATGAGTGTTGACGAGGGAAGTGGAAGTGGAGAGAGGAGGGAGATGAGGAAAGACAAGCAGCAAGTGATCAAAGAAGAAGAAGAAGACTTCTCTTTCAGGTTCTCTTCTCGCAACACTTCCTCGAAATACGACTTTGTCAAGGTCAAGGTCTGGCTCGGTGATAACGCCGATCACTACTACGTCCTCTCCAGGTTTCTCCTCAGCCGAATGTTAACCGTCACTAAGATCCCTAATTATGTTGCTATTAAAATCGCTCTGGAGCTCAAGAAGCTGCTTATAGACAACAGCCTACTTGATGTATCCCAATCTGATTTGGAAGCTAATCTCTTCAAGCTTATGGAACGAAGGGGTTATGGGGAAGAGTACATAAATCGTTACAAGATGATGACAAGATTTCATCATCAAAGAGTGCCATTAGTTATTCTCGTATGTGGAACTGCTTGTGTTGGCAAGTCTACCATTGCTACCCAGCTCGCACAAAGGCTGAATTTGCCCAATGTCTTGCAGACAGATATGGTGTACGAATTACTGCGCACATCAACAGATGCACCATTGACATCTACTCCTGTTTGGGCGCGAGACTTCAGCTCCTCTGAGGAGTTAATTACTGAATTTTGTAGGGAATGCAGGATTGTACGTAAAGGATTGGCTGGCGATTTGAAGAAAGCAATGAAAGATGGAAAGCCAATAATAATAGAGGGAATATATTTGGATCCAAGCATTTATCTAATGGATGATGAAAATAAGACACTAGCCGATGTGCAAGAGAAAACTCTTGACACAAACCATCTTGCAGCGAATGATTCAAAAACACAGATGGGAATTAATTCTCTACTATATACCGACCATGTCAACTCTGAAGAAGGGACACTAAGTAACGAAGTCAACAATGTCTCAGGTGAAAAGGTTAGTGGTGAAGAGACGGACAAAAGTTCTCTTGTCAATAAAGAGAAGTCCGGTCCGGAACCAATAATTATACCTATAGTTCTGAAAATGGCTGAATTTGATCATAAGGCTTTGCTAGAGGAGGAGATCTCAACACGTACATTCAGTGATAAGTGTCTAGTCCAGGATAAAGATAAACTAATAAGCAACTTAAAGACCATCCAGGACTATCTTTGCTCATTCAATTCTCAGGGATTGACGGTAGTCAATATATCAGCAACAACATTCCCACAAACATTGGATTGGCTGCACGGATATCTTCTTGAGTGTATCGAGCATGGTATTTCATCTGTGTCGAACGAACATAGTAGGCCTGCGGAAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_18

Protein Analysis

424

Amino Acids

47.92

Weight (kDa)

5.4

Isoelectric Point (pI)

39.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_18 PF13238 141 - 239 8e-07 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 533
AccI GTMKAC 1 cut(s) 455
AccII CGCG 1 cut(s) 577
AccIII TCCGGA 1 cut(s) 961
AciI CCGC 1 cut(s) 1262
AclWI GGATC 3 cut(s) 220, 707, 720
AcsI RAATTY 3 cut(s) 487, 611, 1001
AcuI CTGAAG 2 cut(s) 568, 879
AfaI GTAC 4 cut(s) 365, 521, 636, 1045
AflIII ACRYGT 1 cut(s) 1040
AgsI TTSAA 4 cut(s) 331, 661, 807, 1129
AjnI CCWGG 3 cut(s) 188, 1068, 1107
AluBI AGCT 6 cut(s) 262, 271, 320, 334, 472, 588
AluI AGCT 6 cut(s) 262, 271, 320, 334, 472, 588
Alw21I GWGCWC 1 cut(s) 264
Alw26I GTCTC 3 cut(s) 573, 898, 914
AlwI GGATC 3 cut(s) 220, 707, 720
Aor13HI TCCGGA 1 cut(s) 961
AoxI GGCC 1 cut(s) 1256
ApeKI GCWGC 4 cut(s) 58, 271, 794, 1192
ApoI RAATTY 3 cut(s) 487, 611, 1001
AseI ATTAAT 1 cut(s) 825
Asp700I GAANNNNTTC 1 cut(s) 826
AspLEI GCGC 2 cut(s) 534, 577
AspS9I GGNCC 1 cut(s) 959
AsuHPI GGTGA 3 cut(s) 170, 911, 926
AvaII GGWCC 1 cut(s) 959
BamHI GGATCC 1 cut(s) 712
BanII GRGCYC 1 cut(s) 264
BbsI GAAGAC 1 cut(s) 90
Bbv12I GWGCWC 1 cut(s) 264
BbvCI CCTCAGC 1 cut(s) 200
BbvI GCAGC 4 cut(s) 70, 258, 806, 1179
BccI CCATC 4 cut(s) 671, 795, 811, 1112
BciT130I CCWGG 3 cut(s) 190, 1070, 1109
BciVI GTATCC 1 cut(s) 310
BclI TGATCA 2 cut(s) 66, 1006
BcoDI GTCTC 3 cut(s) 573, 898, 914
BfaI CTAG 3 cut(s) 752, 1022, 1064
BfmI CTRYAG 1 cut(s) 981
BfuI GTATCC 1 cut(s) 310
BglII AGATCT 1 cut(s) 1032
BisI GCNGC 4 cut(s) 59, 272, 795, 1193
BlsI GCNGC 4 cut(s) 60, 273, 796, 1194
Bme1390I CCNGG 3 cut(s) 190, 1070, 1109
Bme18I GGWCC 1 cut(s) 959
BmgT120I GGNCC 1 cut(s) 959
BmiI GGNNCC 2 cut(s) 714, 966
BmrFI CCNGG 3 cut(s) 190, 1070, 1109
BmsI GCATC 1 cut(s) 535
BoxI GACNNNNGTC 1 cut(s) 1148
BpiI GAAGAC 1 cut(s) 90
BplI GAGNNNNNCTC 2 cut(s) 1019, 1051
BpmI CTGGAG 2 cut(s) 172, 278
Bpu10I CCTNAGC 1 cut(s) 200
BpuEI CTTGAG 2 cut(s) 248, 1229
BsaAI YACGTR 2 cut(s) 638, 1043
BsaWI WCCGGW 2 cut(s) 956, 961
BsaXI ACNNNNNCTCC 6 cut(s) 170, 200, 547, 572, 577, 602
Bse3DI GCAATG 2 cut(s) 459, 675
BseAI TCCGGA 1 cut(s) 961
BseBI CCWGG 3 cut(s) 190, 1070, 1109
BseGI GGATG 2 cut(s) 739, 1104
BseMI GCAATG 2 cut(s) 459, 675
BseMII CTCAG 4 cut(s) 214, 585, 909, 1148
BseRI GAGGAG 6 cut(s) 49, 188, 580, 611, 1040, 1043
BseXI GCAGC 4 cut(s) 70, 258, 806, 1179
BseYI CCCAGC 1 cut(s) 468
BsgI GTGCAG 1 cut(s) 1178
Bsh1236I CGCG 1 cut(s) 577
BshFI GGCC 1 cut(s) 1258
BsiHKAI GWGCWC 1 cut(s) 264
BsiSI CCGG 2 cut(s) 957, 962
BslFI GGGAC 1 cut(s) 880
BsmAI GTCTC 3 cut(s) 573, 898, 914
BsmBI CGTCTC 1 cut(s) 914
BsmFI GGGAC 1 cut(s) 880
BsmI GAATGC 1 cut(s) 629
BsnI GGCC 1 cut(s) 1258
Bsp1286I GDGCHC 1 cut(s) 264
Bsp13I TCCGGA 1 cut(s) 961
Bsp143I GATC 6 cut(s) 66, 169, 225, 712, 1006, 1032
BspACI CCGC 1 cut(s) 1262
BspANI GGCC 1 cut(s) 1258
BspCNI CTCAG 4 cut(s) 213, 586, 908, 1147
BspEI TCCGGA 1 cut(s) 961
BspFNI CGCG 1 cut(s) 577
BspLI GGNNCC 2 cut(s) 714, 966
BspPI GGATC 3 cut(s) 220, 707, 720
BsrDI GCAATG 2 cut(s) 459, 675
BssMI GATC 6 cut(s) 66, 169, 225, 712, 1006, 1032
Bst2UI CCWGG 3 cut(s) 190, 1070, 1109
Bst4CI ACNGT 2 cut(s) 217, 1147
Bst6I CTCTTC 4 cut(s) 109, 332, 354, 912
BstBAI YACGTR 2 cut(s) 638, 1043
BstC8I GCNNGC 3 cut(s) 474, 652, 1260
BstDEI CTNAG 6 cut(s) 200, 222, 594, 872, 895, 1134
BstF5I GGATG 2 cut(s) 739, 1104
BstFNI CGCG 1 cut(s) 577
BstHHI GCGC 2 cut(s) 534, 577
BstKTI GATC 6 cut(s) 69, 172, 228, 715, 1009, 1035
BstMAI GTCTC 3 cut(s) 573, 898, 914
BstMBI GATC 6 cut(s) 66, 169, 225, 712, 1006, 1032
BstMWI GCNNNNNNNGC 2 cut(s) 268, 490
BstNI CCWGG 3 cut(s) 190, 1070, 1109
BstPAI GACNNNNGTC 1 cut(s) 1148
BstSCI CCNGG 3 cut(s) 188, 1068, 1107
BstSFI CTRYAG 1 cut(s) 981
BstSNI TACGTA 1 cut(s) 638
BstUI CGCG 1 cut(s) 577
BstV1I GCAGC 4 cut(s) 70, 258, 806, 1179
BstV2I GAAGAC 1 cut(s) 90
BstX2I RGATCY 3 cut(s) 225, 712, 1032
BstYI RGATCY 3 cut(s) 225, 712, 1032
BsuI GTATCC 1 cut(s) 310
BsuRI GGCC 1 cut(s) 1258
BtsCI GGATG 2 cut(s) 739, 1104
BtsIMutI CAGTG 1 cut(s) 1057
Cac8I GCNNGC 3 cut(s) 474, 652, 1260
CfoI GCGC 2 cut(s) 534, 577
Cfr13I GGNCC 1 cut(s) 959
CpoI CGGWCCG 1 cut(s) 959
Csp6I GTAC 4 cut(s) 364, 520, 635, 1044
CspCI CAANNNNNGTGG 2 cut(s) 1164, 1199
CspI CGGWCCG 1 cut(s) 959
CviAII CATG 2 cut(s) 848, 1223
CviQI GTAC 4 cut(s) 364, 520, 635, 1044
DdeI CTNAG 6 cut(s) 200, 222, 594, 872, 895, 1134
DpnI GATC 6 cut(s) 68, 171, 227, 714, 1008, 1034
DpnII GATC 6 cut(s) 66, 169, 225, 712, 1006, 1032
Eam1104I CTCTTC 4 cut(s) 109, 332, 354, 912
EarI CTCTTC 4 cut(s) 109, 332, 354, 912
Ecl136II GAGCTC 1 cut(s) 262
Eco105I TACGTA 1 cut(s) 638
Eco147I AGGCCT 1 cut(s) 1258
Eco24I GRGCYC 1 cut(s) 264
Eco32I GATATC 1 cut(s) 1202
Eco47I GGWCC 1 cut(s) 959
Eco53kI GAGCTC 1 cut(s) 262
Eco57I CTGAAG 2 cut(s) 568, 879
EcoICRI GAGCTC 1 cut(s) 262
EcoRII CCWGG 3 cut(s) 188, 1068, 1107
EcoRV GATATC 1 cut(s) 1202
EcoT38I GRGCYC 1 cut(s) 264
Esp3I CGTCTC 1 cut(s) 914
FaeI CATG 2 cut(s) 851, 1226
FaqI GGGAC 1 cut(s) 880
FatI CATG 2 cut(s) 847, 1222
FbaI TGATCA 2 cut(s) 66, 1006
FblI GTMKAC 1 cut(s) 455
Fnu4HI GCNGC 4 cut(s) 59, 272, 795, 1193
FokI GGATG 2 cut(s) 746, 1091
FriOI GRGCYC 1 cut(s) 264
Fsp4HI GCNGC 4 cut(s) 59, 272, 795, 1193
FspBI CTAG 3 cut(s) 752, 1022, 1064
FspI TGCGCA 1 cut(s) 533
GlaI GCGC 2 cut(s) 533, 576
GluI GCNGC 4 cut(s) 59, 272, 795, 1193
GsaI CCCAGC 1 cut(s) 472
GsuI CTGGAG 2 cut(s) 172, 278
HaeIII GGCC 1 cut(s) 1258
HapII CCGG 2 cut(s) 957, 962
HhaI GCGC 2 cut(s) 534, 577
Hin1II CATG 2 cut(s) 851, 1226
Hin6I GCGC 2 cut(s) 532, 575
HinP1I GCGC 2 cut(s) 532, 575
HincII GTYRAC 4 cut(s) 10, 213, 853, 886
HindII GTYRAC 4 cut(s) 10, 213, 853, 886
HindIII AAGCTT 1 cut(s) 332
HinfI GANTC 1 cut(s) 803
HpaI GTTAAC 1 cut(s) 213
HpaII CCGG 2 cut(s) 957, 962
HphI GGTGA 3 cut(s) 170, 911, 926
Hpy166II GTNNAC 6 cut(s) 10, 213, 456, 520, 853, 886
Hpy188I TCNGA 4 cut(s) 310, 595, 859, 990
Hpy188III TCNNGA 5 cut(s) 257, 265, 776, 962, 1208
Hpy8I GTNNAC 6 cut(s) 10, 213, 456, 520, 853, 886
HpyAV CCTTC 2 cut(s) 339, 857
HpyCH4III ACNGT 2 cut(s) 217, 1147
HpyCH4IV ACGT 3 cut(s) 180, 637, 1042
HpyCH4V TGCA 6 cut(s) 505, 548, 627, 763, 794, 1195
HpyF10VI GCNNNNNNNGC 2 cut(s) 268, 490
HpyF3I CTNAG 6 cut(s) 200, 222, 594, 872, 895, 1134
HpySE526I ACGT 3 cut(s) 180, 637, 1042
Hsp92II CATG 2 cut(s) 851, 1226
HspAI GCGC 2 cut(s) 532, 575
Kpn2I TCCGGA 1 cut(s) 961
Ksp22I TGATCA 2 cut(s) 66, 1006
KspAI GTTAAC 1 cut(s) 213
Kzo9I GATC 6 cut(s) 66, 169, 225, 712, 1006, 1032
LmnI GCTCC 2 cut(s) 259, 593
Lsp1109I GCAGC 4 cut(s) 70, 258, 806, 1179
LweI GCATC 1 cut(s) 535
MaeI CTAG 3 cut(s) 752, 1022, 1064
MaeII ACGT 3 cut(s) 180, 637, 1042
MaeIII GTNAC 3 cut(s) 217, 374, 875
MalI GATC 6 cut(s) 68, 171, 227, 714, 1008, 1034
MboI GATC 6 cut(s) 66, 169, 225, 712, 1006, 1032
MflI RGATCY 3 cut(s) 225, 712, 1032
MhlI GDGCHC 1 cut(s) 264
MroI TCCGGA 1 cut(s) 961
MroXI GAANNNNTTC 1 cut(s) 826
MseI TTAA 5 cut(s) 212, 246, 602, 825, 1097
MspI CCGG 2 cut(s) 957, 962
MspR9I CCNGG 3 cut(s) 190, 1070, 1109
Mva1269I GAATGC 1 cut(s) 629
MvaI CCWGG 3 cut(s) 190, 1070, 1109
MvnI CGCG 1 cut(s) 577
MwoI GCNNNNNNNGC 2 cut(s) 268, 490
NdeII GATC 6 cut(s) 66, 169, 225, 712, 1006, 1032
NlaIII CATG 2 cut(s) 851, 1226
NlaIV GGNNCC 2 cut(s) 714, 966
NmuCI GTSAC 1 cut(s) 217
NsbI TGCGCA 1 cut(s) 533
PceI AGGCCT 1 cut(s) 1258
PctI GAATGC 1 cut(s) 629
PdmI GAANNNNTTC 1 cut(s) 826
PfeI GAWTC 1 cut(s) 803
PflFI GACNNNGTC 2 cut(s) 134, 848
PfoI TCCNGGA 2 cut(s) 1068, 1107
PkrI GCNGC 4 cut(s) 60, 273, 796, 1194
Ppu21I YACGTR 2 cut(s) 638, 1043
PshAI GACNNNNGTC 1 cut(s) 1148
PshBI ATTAAT 1 cut(s) 825
Psp124BI GAGCTC 1 cut(s) 264
Psp6I CCWGG 3 cut(s) 188, 1068, 1107
PspFI CCCAGC 1 cut(s) 468
PspGI CCWGG 3 cut(s) 188, 1068, 1107
PspN4I GGNNCC 2 cut(s) 714, 966
PspPI GGNCC 1 cut(s) 959
PsuI RGATCY 3 cut(s) 225, 712, 1032
PsyI GACNNNGTC 2 cut(s) 134, 848
RsaI GTAC 4 cut(s) 365, 521, 636, 1045
RsaNI GTAC 4 cut(s) 364, 520, 635, 1044
Rsr2I CGGWCCG 1 cut(s) 959
RsrII CGGWCCG 1 cut(s) 959
SacI GAGCTC 1 cut(s) 264
SaqAI TTAA 5 cut(s) 212, 246, 602, 825, 1097
SatI GCNGC 4 cut(s) 59, 272, 795, 1193
Sau3AI GATC 6 cut(s) 66, 169, 225, 712, 1006, 1032
Sau96I GGNCC 1 cut(s) 959
ScrFI CCNGG 3 cut(s) 190, 1070, 1109
SduI GDGCHC 1 cut(s) 264
SfaNI GCATC 1 cut(s) 535
SfcI CTRYAG 1 cut(s) 981
SinI GGWCC 1 cut(s) 959
SmlI CTYRAG 2 cut(s) 263, 1208
SmoI CTYRAG 2 cut(s) 263, 1208
SnaBI TACGTA 1 cut(s) 638
SseBI AGGCCT 1 cut(s) 1258
SsiI CCGC 1 cut(s) 1262
SspMI CTAG 3 cut(s) 752, 1022, 1064
SstI GAGCTC 1 cut(s) 264
StuI AGGCCT 1 cut(s) 1258
StyD4I CCNGG 3 cut(s) 188, 1068, 1107
TaaI ACNGT 2 cut(s) 217, 1147
TaiI ACGT 3 cut(s) 183, 640, 1045
TaqI TCGA 3 cut(s) 122, 1218, 1241
TatI WGTACW 1 cut(s) 363
TfiI GAWTC 1 cut(s) 803
Tru1I TTAA 5 cut(s) 212, 246, 602, 825, 1097
Tru9I TTAA 5 cut(s) 212, 246, 602, 825, 1097
TscAI CASTG 1 cut(s) 1057
TseFI GTSAC 1 cut(s) 217
TseI GCWGC 4 cut(s) 58, 271, 794, 1192
Tsp45I GTSAC 1 cut(s) 217
TspDTI ATGAA 4 cut(s) 386, 686, 753, 1221
TspGWI ACGGA 2 cut(s) 938, 1212
TspRI CASTG 1 cut(s) 1057
Tth111I GACNNNGTC 2 cut(s) 134, 848
VpaK11BI GGWCC 1 cut(s) 959
VspI ATTAAT 1 cut(s) 825
XapI RAATTY 3 cut(s) 487, 611, 1001
XmiI GTMKAC 1 cut(s) 455
XmnI GAANNNNTTC 1 cut(s) 826
XspI CTAG 3 cut(s) 752, 1022, 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.