RLG00000029700

phosphotransferase activity, carboxyl group as acceptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0002381
Physical Location & Seq
Forward (+)
43400506 .. 43408239
7734 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029700

Sequence Viewer

Length: 1302 bp
ATGAGGAAAGATAAGGGAGTAGATGAAAACAGCAGCGAGGAAGAGTTGGACAAAGGCGTCTCTTTGACTTCCACCAGGTTCTCTTCTCGCAACACTTCCTCCAAATACGACTTTGTCAAGGTGAAGGTGTGGCTGGGAGATAATGCGGATCACTACTACGTGCTTTCCAGGTTTCTGCTCAGCCGAATGTTAACTGTCACCAAGATCCCAAATTATGTAGCTATTAAAATCGCTCTGGAGCTCAAGAAGCTGCTAATAGACAACAGCCTTCTAGATGTTTCCCAGTCTGATTTGGAAGCTAATCTCTTTAAGCTTATGGAACGAAGGGGTTATGGCGAAGAGTACATAAGTCGTTACAAGATGATGACCAGATTTCATCATCAAAGAGTGCCGTTAGTTATTCTTGTCTGTGGAACTGCTTGTGTCGGGAAGTCAACCATTGCTACCCAACTCGCACAAAGGCTAAATTTGCCCAATGTCTTGCAGACAGATATGGTGTACGAATTACTGCGCACATCAACAGATGCACCATTGACATCTACTCCTGTTTGGGCGCGAGACTTCAGCTCCTCTGAGGAGTTAATTACTGAATTTTGCAGGGAATGCAGGATTGTTCGTAAAGGATTGGCTGGTGATTTGAAGAAAGCAATGAAAGATGGAAAGCCAATAATAATAGAGGGGATACATTTGGATCCAAGCATTTATTTAATGGATGATGAAAATAAAACACGAGCTGATGTGCAAGAGAAAACTCCGGAGGCAAACCATCTTGCAGCAAATGATTCAAAAACACAGATGGGAAATGATTCTCTAATATATACCGAGCATGTCAACTCTGAAGAAGGGACACTAAATAACAAAGTCAACAATGTCTCAGATTACCTGGAAGCTATTAACCTTGCTGGAAGTTTGTCTGATAAAAAAGGTGAAAATCTTAGTGGTGAAGAGACAAACAAAAATTCTCTTGTTAAGAAAGAGAAGTCCGGTCCGGAACCAATAATTATACCTATAGTTCTGAAGATGGCTGAATTTGATCATAAGGCTTTGCTAGAGGAGGAGATCTCAACACGAACATTTAGTGATAAATGTCTAGTCCAGGATAAAGATAAACTAATAAGCAACTTAAAGATCATCCAGGACTATCTTTGCTCATTCAATTCTCAGGGATTGACAGTAGTCAATATATCAGCAACAACATTCCCACAAACATTGGATTGGCTGCATGGATATCTTCTTGAGTGTATTGAGCATGGTATTTCATCTGTGTCCAATGAAAATAGTAGGCGGCCTGCGGAAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_18

Protein Analysis

434

Amino Acids

48.81

Weight (kDa)

5.73

Isoelectric Point (pI)

38.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_18 PF13238 134 - 233 3.9e-07 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 56
Acc16I TGCGCA 1 cut(s) 512
AccII CGCG 1 cut(s) 556
AccIII TCCGGA 2 cut(s) 754, 988
AciI CCGC 3 cut(s) 146, 1285, 1292
AclWI GGATC 4 cut(s) 156, 199, 686, 699
AcsI RAATTY 4 cut(s) 466, 590, 958, 1028
AcuI CTGAAG 3 cut(s) 547, 858, 1037
AcyI GRCGYC 1 cut(s) 57
AfaI GTAC 2 cut(s) 344, 500
AgsI TTSAA 3 cut(s) 640, 786, 1156
AjnI CCWGG 5 cut(s) 74, 167, 882, 1095, 1134
AluBI AGCT 8 cut(s) 221, 241, 250, 299, 313, 567, 734, 890
AluI AGCT 8 cut(s) 221, 241, 250, 299, 313, 567, 734, 890
Alw21I GWGCWC 1 cut(s) 243
Alw26I GTCTC 4 cut(s) 64, 552, 877, 941
AlwI GGATC 4 cut(s) 156, 199, 686, 699
Aor13HI TCCGGA 2 cut(s) 754, 988
AoxI GGCC 1 cut(s) 1286
ApeKI GCWGC 4 cut(s) 33, 250, 773, 1219
ApoI RAATTY 4 cut(s) 466, 590, 958, 1028
Asp700I GAANNNNTTC 1 cut(s) 805
AspLEI GCGC 2 cut(s) 513, 556
AspS9I GGNCC 1 cut(s) 986
AsuHPI GGTGA 5 cut(s) 133, 190, 644, 938, 953
AvaII GGWCC 1 cut(s) 986
BamHI GGATCC 1 cut(s) 691
BanII GRGCYC 1 cut(s) 243
BauI CACGAG 1 cut(s) 729
Bbv12I GWGCWC 1 cut(s) 243
BbvI GCAGC 4 cut(s) 45, 237, 785, 1206
BccI CCATC 4 cut(s) 650, 774, 790, 1015
BceAI ACGGC 1 cut(s) 376
BciT130I CCWGG 5 cut(s) 76, 169, 884, 1097, 1136
BciVI GTATCC 1 cut(s) 675
BclI TGATCA 1 cut(s) 1033
BcoDI GTCTC 4 cut(s) 64, 552, 877, 941
BfaI CTAG 3 cut(s) 272, 1049, 1091
BfmI CTRYAG 1 cut(s) 1008
BfuI GTATCC 1 cut(s) 675
BglII AGATCT 1 cut(s) 1059
BisI GCNGC 5 cut(s) 34, 251, 774, 1220, 1286
BlpI GCTNAGC 1 cut(s) 179
BlsI GCNGC 5 cut(s) 35, 252, 775, 1221, 1287
Bme1390I CCNGG 5 cut(s) 76, 169, 884, 1097, 1136
Bme18I GGWCC 1 cut(s) 986
BmgT120I GGNCC 1 cut(s) 986
BmiI GGNNCC 2 cut(s) 693, 993
BmrFI CCNGG 5 cut(s) 76, 169, 884, 1097, 1136
BmrI ACTGGG 1 cut(s) 277
BmsI GCATC 1 cut(s) 514
BmuI ACTGGG 1 cut(s) 277
BoxI GACNNNNGTC 1 cut(s) 1175
BplI GAGNNNNNCTC 2 cut(s) 1046, 1078
BpmI CTGGAG 1 cut(s) 257
Bpu1102I GCTNAGC 1 cut(s) 179
BpuEI CTTGAG 2 cut(s) 227, 1256
BsaAI YACGTR 1 cut(s) 160
BsaHI GRCGYC 1 cut(s) 57
BsaWI WCCGGW 3 cut(s) 754, 983, 988
BsaXI ACNNNNNCTCC 6 cut(s) 83, 113, 526, 551, 556, 581
Bse1I ACTGG 1 cut(s) 283
Bse3DI GCAATG 2 cut(s) 438, 654
BseAI TCCGGA 2 cut(s) 754, 988
BseBI CCWGG 5 cut(s) 76, 169, 884, 1097, 1136
BseGI GGATG 2 cut(s) 718, 1131
BseMI GCAATG 2 cut(s) 438, 654
BseMII CTCAG 4 cut(s) 193, 564, 888, 1175
BseNI ACTGG 1 cut(s) 283
BseRI GAGGAG 4 cut(s) 559, 590, 1067, 1070
BseXI GCAGC 4 cut(s) 45, 237, 785, 1206
BseYI CCCAGC 1 cut(s) 133
Bsh1236I CGCG 1 cut(s) 556
BshFI GGCC 1 cut(s) 1288
BsiHKAI GWGCWC 1 cut(s) 243
BsiSI CCGG 3 cut(s) 755, 984, 989
BslFI GGGAC 1 cut(s) 859
BsmAI GTCTC 4 cut(s) 64, 552, 877, 941
BsmBI CGTCTC 1 cut(s) 64
BsmFI GGGAC 1 cut(s) 859
BsmI GAATGC 1 cut(s) 608
BsnI GGCC 1 cut(s) 1288
Bsp1286I GDGCHC 1 cut(s) 243
Bsp13I TCCGGA 2 cut(s) 754, 988
Bsp143I GATC 6 cut(s) 148, 204, 691, 1033, 1059, 1128
Bsp1720I GCTNAGC 1 cut(s) 179
BspACI CCGC 3 cut(s) 146, 1285, 1292
BspANI GGCC 1 cut(s) 1288
BspCNI CTCAG 4 cut(s) 192, 565, 887, 1174
BspEI TCCGGA 2 cut(s) 754, 988
BspFNI CGCG 1 cut(s) 556
BspLI GGNNCC 2 cut(s) 693, 993
BspPI GGATC 4 cut(s) 156, 199, 686, 699
BsrDI GCAATG 2 cut(s) 438, 654
BsrI ACTGG 1 cut(s) 283
BssMI GATC 6 cut(s) 148, 204, 691, 1033, 1059, 1128
BssNI GRCGYC 1 cut(s) 57
BssSI CACGAG 1 cut(s) 729
Bst2BI CACGAG 1 cut(s) 729
Bst2UI CCWGG 5 cut(s) 76, 169, 884, 1097, 1136
Bst4CI ACNGT 2 cut(s) 196, 1174
Bst6I CTCTTC 4 cut(s) 36, 88, 333, 939
BstACI GRCGYC 1 cut(s) 57
BstAPI GCANNNNNTGC 1 cut(s) 603
BstBAI YACGTR 1 cut(s) 160
BstC8I GCNNGC 1 cut(s) 1290
BstDEI CTNAG 5 cut(s) 179, 573, 874, 935, 1161
BstF5I GGATG 2 cut(s) 718, 1131
BstFNI CGCG 1 cut(s) 556
BstHHI GCGC 2 cut(s) 513, 556
BstKTI GATC 6 cut(s) 151, 207, 694, 1036, 1062, 1131
BstMAI GTCTC 4 cut(s) 64, 552, 877, 941
BstMBI GATC 6 cut(s) 148, 204, 691, 1033, 1059, 1128
BstMWI GCNNNNNNNGC 3 cut(s) 247, 469, 603
BstNI CCWGG 5 cut(s) 76, 169, 884, 1097, 1136
BstNSI RCATGY 1 cut(s) 830
BstPAI GACNNNNGTC 1 cut(s) 1175
BstSCI CCNGG 5 cut(s) 74, 167, 882, 1095, 1134
BstSFI CTRYAG 1 cut(s) 1008
BstUI CGCG 1 cut(s) 556
BstV1I GCAGC 4 cut(s) 45, 237, 785, 1206
BstX2I RGATCY 3 cut(s) 204, 691, 1059
BstYI RGATCY 3 cut(s) 204, 691, 1059
BsuI GTATCC 1 cut(s) 675
BsuRI GGCC 1 cut(s) 1288
BtsCI GGATG 2 cut(s) 718, 1131
Cac8I GCNNGC 1 cut(s) 1290
CfoI GCGC 2 cut(s) 513, 556
Cfr13I GGNCC 1 cut(s) 986
CpoI CGGWCCG 1 cut(s) 986
CseI GACGC 1 cut(s) 46
CsiI ACCWGGT 1 cut(s) 74
Csp6I GTAC 2 cut(s) 343, 499
CspCI CAANNNNNGTGG 2 cut(s) 1191, 1226
CspI CGGWCCG 1 cut(s) 986
CviAII CATG 3 cut(s) 827, 1223, 1250
CviQI GTAC 2 cut(s) 343, 499
DdeI CTNAG 5 cut(s) 179, 573, 874, 935, 1161
DpnI GATC 6 cut(s) 150, 206, 693, 1035, 1061, 1130
DpnII GATC 6 cut(s) 148, 204, 691, 1033, 1059, 1128
DrdI GACNNNNNNGTC 1 cut(s) 56
DseDI GACNNNNNNGTC 1 cut(s) 56
Eam1104I CTCTTC 4 cut(s) 36, 88, 333, 939
EarI CTCTTC 4 cut(s) 36, 88, 333, 939
Ecl136II GAGCTC 1 cut(s) 241
Eco24I GRGCYC 1 cut(s) 243
Eco32I GATATC 1 cut(s) 1229
Eco47I GGWCC 1 cut(s) 986
Eco53kI GAGCTC 1 cut(s) 241
Eco57I CTGAAG 3 cut(s) 547, 858, 1037
EcoICRI GAGCTC 1 cut(s) 241
EcoRII CCWGG 5 cut(s) 74, 167, 882, 1095, 1134
EcoRV GATATC 1 cut(s) 1229
EcoT38I GRGCYC 1 cut(s) 243
Esp3I CGTCTC 1 cut(s) 64
FaeI CATG 3 cut(s) 830, 1226, 1253
FaqI GGGAC 1 cut(s) 859
FatI CATG 3 cut(s) 826, 1222, 1249
FbaI TGATCA 1 cut(s) 1033
Fnu4HI GCNGC 5 cut(s) 34, 251, 774, 1220, 1286
FokI GGATG 2 cut(s) 725, 1118
FriOI GRGCYC 1 cut(s) 243
Fsp4HI GCNGC 5 cut(s) 34, 251, 774, 1220, 1286
FspBI CTAG 3 cut(s) 272, 1049, 1091
FspI TGCGCA 1 cut(s) 512
GlaI GCGC 2 cut(s) 512, 555
GluI GCNGC 5 cut(s) 34, 251, 774, 1220, 1286
GsaI CCCAGC 1 cut(s) 137
GsuI CTGGAG 1 cut(s) 257
HaeIII GGCC 1 cut(s) 1288
HapII CCGG 3 cut(s) 755, 984, 989
HgaI GACGC 1 cut(s) 46
HhaI GCGC 2 cut(s) 513, 556
Hin1I GRCGYC 1 cut(s) 57
Hin1II CATG 3 cut(s) 830, 1226, 1253
Hin6I GCGC 2 cut(s) 511, 554
HinP1I GCGC 2 cut(s) 511, 554
HincII GTYRAC 4 cut(s) 192, 435, 832, 865
HindII GTYRAC 4 cut(s) 192, 435, 832, 865
HindIII AAGCTT 1 cut(s) 311
HinfI GANTC 2 cut(s) 782, 806
HpaI GTTAAC 1 cut(s) 192
HpaII CCGG 3 cut(s) 755, 984, 989
HphI GGTGA 5 cut(s) 133, 190, 644, 938, 953
Hpy166II GTNNAC 5 cut(s) 192, 435, 499, 832, 865
Hpy188I TCNGA 6 cut(s) 289, 574, 838, 877, 916, 1017
Hpy188III TCNNGA 7 cut(s) 236, 244, 272, 427, 755, 989, 1235
Hpy8I GTNNAC 5 cut(s) 192, 435, 499, 832, 865
HpyAV CCTTC 4 cut(s) 118, 278, 318, 836
HpyCH4III ACNGT 2 cut(s) 196, 1174
HpyCH4IV ACGT 1 cut(s) 159
HpyCH4V TGCA 7 cut(s) 484, 527, 597, 606, 742, 773, 1222
HpyF10VI GCNNNNNNNGC 3 cut(s) 247, 469, 603
HpyF3I CTNAG 5 cut(s) 179, 573, 874, 935, 1161
HpySE526I ACGT 1 cut(s) 159
Hsp92I GRCGYC 1 cut(s) 57
Hsp92II CATG 3 cut(s) 830, 1226, 1253
HspAI GCGC 2 cut(s) 511, 554
Kpn2I TCCGGA 2 cut(s) 754, 988
Ksp22I TGATCA 1 cut(s) 1033
KspAI GTTAAC 1 cut(s) 192
Kzo9I GATC 6 cut(s) 148, 204, 691, 1033, 1059, 1128
LmnI GCTCC 2 cut(s) 238, 572
Lsp1109I GCAGC 4 cut(s) 45, 237, 785, 1206
LweI GCATC 1 cut(s) 514
MabI ACCWGGT 1 cut(s) 74
MaeI CTAG 3 cut(s) 272, 1049, 1091
MaeII ACGT 1 cut(s) 159
MaeIII GTNAC 2 cut(s) 196, 353
MalI GATC 6 cut(s) 150, 206, 693, 1035, 1061, 1130
MboI GATC 6 cut(s) 148, 204, 691, 1033, 1059, 1128
MboII GAAGA 8 cut(s) 53, 75, 350, 652, 851, 956, 1030, 1223
MflI RGATCY 3 cut(s) 204, 691, 1059
MhlI GDGCHC 1 cut(s) 243
MluCI AATT 9 cut(s) 211, 466, 503, 582, 590, 958, 999, 1028, 1156
MmeI TCCRAC 1 cut(s) 27
MnlI CCTC 8 cut(s) 31, 109, 568, 580, 670, 751, 1045, 1048
MroI TCCGGA 2 cut(s) 754, 988
MroXI GAANNNNTTC 1 cut(s) 805
MseI TTAA 8 cut(s) 191, 225, 309, 581, 707, 894, 969, 1124
MspI CCGG 3 cut(s) 755, 984, 989
MspR9I CCNGG 5 cut(s) 76, 169, 884, 1097, 1136
Mva1269I GAATGC 1 cut(s) 608
MvaI CCWGG 5 cut(s) 76, 169, 884, 1097, 1136
MvnI CGCG 1 cut(s) 556
MwoI GCNNNNNNNGC 3 cut(s) 247, 469, 603
NdeII GATC 6 cut(s) 148, 204, 691, 1033, 1059, 1128
NlaIII CATG 3 cut(s) 830, 1226, 1253
NlaIV GGNNCC 2 cut(s) 693, 993
NmuCI GTSAC 1 cut(s) 196
NsbI TGCGCA 1 cut(s) 512
NspI RCATGY 1 cut(s) 830
PctI GAATGC 1 cut(s) 608
PdmI GAANNNNTTC 1 cut(s) 805
PfeI GAWTC 2 cut(s) 782, 806
PflFI GACNNNGTC 1 cut(s) 113
PfoI TCCNGGA 2 cut(s) 1095, 1134
PkrI GCNGC 5 cut(s) 35, 252, 775, 1221, 1287
Ppu21I YACGTR 1 cut(s) 160
PshAI GACNNNNGTC 1 cut(s) 1175
Psp124BI GAGCTC 1 cut(s) 243
Psp6I CCWGG 5 cut(s) 74, 167, 882, 1095, 1134
PspFI CCCAGC 1 cut(s) 133
PspGI CCWGG 5 cut(s) 74, 167, 882, 1095, 1134
PspN4I GGNNCC 2 cut(s) 693, 993
PspPI GGNCC 1 cut(s) 986
PsuI RGATCY 3 cut(s) 204, 691, 1059
PsyI GACNNNGTC 1 cut(s) 113
RsaI GTAC 2 cut(s) 344, 500
RsaNI GTAC 2 cut(s) 343, 499
Rsr2I CGGWCCG 1 cut(s) 986
RsrII CGGWCCG 1 cut(s) 986
SacI GAGCTC 1 cut(s) 243
SaqAI TTAA 8 cut(s) 191, 225, 309, 581, 707, 894, 969, 1124
SatI GCNGC 5 cut(s) 34, 251, 774, 1220, 1286
Sau3AI GATC 6 cut(s) 148, 204, 691, 1033, 1059, 1128
Sau96I GGNCC 1 cut(s) 986
ScrFI CCNGG 5 cut(s) 76, 169, 884, 1097, 1136
SduI GDGCHC 1 cut(s) 243
SexAI ACCWGGT 1 cut(s) 74
SfaNI GCATC 1 cut(s) 514
SfcI CTRYAG 1 cut(s) 1008
SinI GGWCC 1 cut(s) 986
SmlI CTYRAG 2 cut(s) 242, 1235
SmoI CTYRAG 2 cut(s) 242, 1235
Sse9I AATT 9 cut(s) 211, 466, 503, 582, 590, 958, 999, 1028, 1156
SsiI CCGC 3 cut(s) 146, 1285, 1292
SspMI CTAG 3 cut(s) 272, 1049, 1091
SstI GAGCTC 1 cut(s) 243
StyD4I CCNGG 5 cut(s) 74, 167, 882, 1095, 1134
TaaI ACNGT 2 cut(s) 196, 1174
TaiI ACGT 1 cut(s) 162
TasI AATT 9 cut(s) 211, 466, 503, 582, 590, 958, 999, 1028, 1156
TatI WGTACW 1 cut(s) 342
TauI GCSGC 1 cut(s) 1288
TfiI GAWTC 2 cut(s) 782, 806
Tru1I TTAA 8 cut(s) 191, 225, 309, 581, 707, 894, 969, 1124
Tru9I TTAA 8 cut(s) 191, 225, 309, 581, 707, 894, 969, 1124
TseFI GTSAC 1 cut(s) 196
TseI GCWGC 4 cut(s) 33, 250, 773, 1219
Tsp45I GTSAC 1 cut(s) 196
TspDTI ATGAA 6 cut(s) 39, 365, 665, 732, 1248, 1287
Tth111I GACNNNGTC 1 cut(s) 113
VpaK11BI GGWCC 1 cut(s) 986
XapI RAATTY 4 cut(s) 466, 590, 958, 1028
XbaI TCTAGA 1 cut(s) 271
XceI RCATGY 1 cut(s) 830
XmnI GAANNNNTTC 1 cut(s) 805
XspI CTAG 3 cut(s) 272, 1049, 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.