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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g22100 FvH4_2g22120 |
| pyrus_communis | pycom11g21110 |
| rosa_laevigata | RLG00000012287 RLG00000012305 RLG00000012335 RLG00000013934 |
| rosa_multiflora | Rmu_ssc0000422.1_g000045 |
| rosa_roxburghii | Rroxscaffold_7G00177800 |
| rosa_rugosa | Rorug06G0036100 Rorug06G0039200 Rorug06G0197400 Rorug06G0199900 Rorug06G0203300 Rorug06G0205100 |
| rosa_samantha | Rh3AG160500 Rh3BG185000 Rh3CG175500 Rh3DG189700 Rh5AG111800 Rh5AG112000 Rh5DG107900 Rh6AG158500 Rh6AG311300 Rh6AG314400 Rh6AG316800 Rh6BG153800 Rh6BG160700 Rh6BG161400 Rh6BG162500 Rh6BG162700 Rh6BG317800 Rh6BG322000 Rh6CG155900 Rh6CG324900 Rh6CG328200 Rh6CG329800 Rh6DG138800 Rh6DG146100 Rh6DG148200 Rh6DG148500 Rh6DG310600 Rh6DG313900 Rh6DG315200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 520 |
| AcuI | CTGAAG | 1 cut(s) | 15 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 167, 212, 338, 370, 383, 509, 557 |
| AgsI | TTSAA | 3 cut(s) | 228, 399, 573 |
| AjnI | CCWGG | 1 cut(s) | 535 |
| AlwI | GGATC | 1 cut(s) | 520 |
| AoxI | GGCC | 3 cut(s) | 253, 424, 598 |
| ApeKI | GCWGC | 1 cut(s) | 566 |
| AspLEI | GCGC | 1 cut(s) | 525 |
| AspS9I | GGNCC | 4 cut(s) | 152, 323, 494, 539 |
| AsuC2I | CCSGG | 3 cut(s) | 165, 336, 507 |
| AsuHPI | GGTGA | 2 cut(s) | 175, 346 |
| AvaII | GGWCC | 4 cut(s) | 152, 323, 494, 539 |
| BbvI | GCAGC | 1 cut(s) | 553 |
| BciT130I | CCWGG | 1 cut(s) | 537 |
| BcnI | CCSGG | 3 cut(s) | 165, 336, 507 |
| BfaI | CTAG | 2 cut(s) | 195, 622 |
| BisI | GCNGC | 1 cut(s) | 567 |
| BlsI | GCNGC | 1 cut(s) | 568 |
| Bme1390I | CCNGG | 4 cut(s) | 165, 336, 507, 537 |
| Bme18I | GGWCC | 4 cut(s) | 152, 323, 494, 539 |
| BmgT120I | GGNCC | 4 cut(s) | 152, 323, 494, 539 |
| BmiI | GGNNCC | 5 cut(s) | 153, 309, 324, 375, 495 |
| BmrFI | CCNGG | 4 cut(s) | 165, 336, 507, 537 |
| BmrI | ACTGGG | 1 cut(s) | 360 |
| BmuI | ACTGGG | 1 cut(s) | 360 |
| BpuMI | CCSGG | 3 cut(s) | 165, 336, 507 |
| BsaWI | WCCGGW | 1 cut(s) | 467 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 167, 212, 338, 370, 383, 509, 557 |
| Bse1I | ACTGG | 3 cut(s) | 110, 297, 366 |
| BseBI | CCWGG | 1 cut(s) | 537 |
| BseGI | GGATG | 1 cut(s) | 217 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 167, 212, 338, 370, 383, 509, 557 |
| BseNI | ACTGG | 3 cut(s) | 110, 297, 366 |
| BseXI | GCAGC | 1 cut(s) | 553 |
| BshFI | GGCC | 3 cut(s) | 255, 426, 600 |
| BsiSI | CCGG | 5 cut(s) | 165, 336, 371, 468, 507 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 167, 212, 338, 370, 383, 509, 557 |
| BsnI | GGCC | 3 cut(s) | 255, 426, 600 |
| Bsp143I | GATC | 1 cut(s) | 512 |
| BspANI | GGCC | 3 cut(s) | 255, 426, 600 |
| BspLI | GGNNCC | 5 cut(s) | 153, 309, 324, 375, 495 |
| BspPI | GGATC | 1 cut(s) | 520 |
| BspQI | GCTCTTC | 1 cut(s) | 278 |
| BsrI | ACTGG | 3 cut(s) | 110, 297, 366 |
| BssMI | GATC | 1 cut(s) | 512 |
| Bst2UI | CCWGG | 1 cut(s) | 537 |
| Bst6I | CTCTTC | 1 cut(s) | 278 |
| BstC8I | GCNNGC | 5 cut(s) | 59, 76, 253, 424, 598 |
| BstDEI | CTNAG | 1 cut(s) | 453 |
| BstF5I | GGATG | 1 cut(s) | 217 |
| BstHHI | GCGC | 1 cut(s) | 525 |
| BstKTI | GATC | 1 cut(s) | 515 |
| BstMBI | GATC | 1 cut(s) | 512 |
| BstNI | CCWGG | 1 cut(s) | 537 |
| BstNSI | RCATGY | 1 cut(s) | 61 |
| BstSCI | CCNGG | 4 cut(s) | 163, 334, 505, 535 |
| BstV1I | GCAGC | 1 cut(s) | 553 |
| BstX2I | RGATCY | 1 cut(s) | 512 |
| BstYI | RGATCY | 1 cut(s) | 512 |
| BsuRI | GGCC | 3 cut(s) | 255, 426, 600 |
| BtsCI | GGATG | 1 cut(s) | 217 |
| BtsIMutI | CAGTG | 1 cut(s) | 39 |
| Cac8I | GCNNGC | 5 cut(s) | 59, 76, 253, 424, 598 |
| CfoI | GCGC | 1 cut(s) | 525 |
| Cfr13I | GGNCC | 4 cut(s) | 152, 323, 494, 539 |
| CsiI | ACCWGGT | 1 cut(s) | 535 |
| CviAII | CATG | 3 cut(s) | 58, 392, 563 |
| CviJI | RGCY | 6 cut(s) | 74, 255, 310, 374, 426, 600 |
| CviKI_1 | RGCY | 6 cut(s) | 74, 255, 310, 374, 426, 600 |
| DdeI | CTNAG | 1 cut(s) | 453 |
| DpnI | GATC | 1 cut(s) | 514 |
| DpnII | GATC | 1 cut(s) | 512 |
| Eam1104I | CTCTTC | 1 cut(s) | 278 |
| EarI | CTCTTC | 1 cut(s) | 278 |
| Eco47I | GGWCC | 4 cut(s) | 152, 323, 494, 539 |
| Eco57I | CTGAAG | 1 cut(s) | 15 |
| EcoO109I | RGGNCCY | 1 cut(s) | 152 |
| EcoRII | CCWGG | 1 cut(s) | 535 |
| FaeI | CATG | 3 cut(s) | 61, 395, 566 |
| FaiI | YATR | 7 cut(s) | 53, 59, 134, 174, 345, 393, 564 |
| FatI | CATG | 3 cut(s) | 57, 391, 562 |
| Fnu4HI | GCNGC | 1 cut(s) | 567 |
| FokI | GGATG | 1 cut(s) | 204 |
| Fsp4HI | GCNGC | 1 cut(s) | 567 |
| FspBI | CTAG | 2 cut(s) | 195, 622 |
| GlaI | GCGC | 1 cut(s) | 524 |
| GluI | GCNGC | 1 cut(s) | 567 |
| HaeIII | GGCC | 3 cut(s) | 255, 426, 600 |
| HapII | CCGG | 5 cut(s) | 165, 336, 371, 468, 507 |
| HhaI | GCGC | 1 cut(s) | 525 |
| Hin1II | CATG | 3 cut(s) | 61, 395, 566 |
| Hin6I | GCGC | 1 cut(s) | 523 |
| HinP1I | GCGC | 1 cut(s) | 523 |
| HinfI | GANTC | 2 cut(s) | 140, 479 |
| HpaII | CCGG | 5 cut(s) | 165, 336, 371, 468, 507 |
| HphI | GGTGA | 2 cut(s) | 175, 346 |
| Hpy166II | GTNNAC | 2 cut(s) | 170, 341 |
| Hpy188I | TCNGA | 2 cut(s) | 23, 70 |
| Hpy8I | GTNNAC | 2 cut(s) | 170, 341 |
| Hpy99I | CGWCG | 1 cut(s) | 283 |
| HpyAV | CCTTC | 4 cut(s) | 142, 234, 313, 484 |
| HpyCH4V | TGCA | 4 cut(s) | 61, 251, 422, 596 |
| HpyF3I | CTNAG | 1 cut(s) | 453 |
| Hsp92II | CATG | 3 cut(s) | 61, 395, 566 |
| HspAI | GCGC | 1 cut(s) | 523 |
| Kzo9I | GATC | 1 cut(s) | 512 |
| LguI | GCTCTTC | 1 cut(s) | 278 |
| LmnI | GCTCC | 3 cut(s) | 208, 307, 379 |
| Lsp1109I | GCAGC | 1 cut(s) | 553 |
| MabI | ACCWGGT | 1 cut(s) | 535 |
| MaeI | CTAG | 2 cut(s) | 195, 622 |
| MaeIII | GTNAC | 2 cut(s) | 181, 352 |
| MalI | GATC | 1 cut(s) | 514 |
| MboI | GATC | 1 cut(s) | 512 |
| MboII | GAAGA | 3 cut(s) | 127, 157, 295 |
| MflI | RGATCY | 1 cut(s) | 512 |
| MlyI | GAGTC | 2 cut(s) | 149, 488 |
| MmeI | TCCRAC | 3 cut(s) | 48, 350, 521 |
| MnlI | CCTC | 6 cut(s) | 64, 171, 231, 342, 513, 558 |
| MseI | TTAA | 4 cut(s) | 12, 234, 405, 579 |
| MslI | CAYNNNNRTG | 1 cut(s) | 56 |
| MspI | CCGG | 5 cut(s) | 165, 336, 371, 468, 507 |
| MspR9I | CCNGG | 4 cut(s) | 165, 336, 507, 537 |
| MvaI | CCWGG | 1 cut(s) | 537 |
| NciI | CCSGG | 3 cut(s) | 165, 336, 507 |
| NdeII | GATC | 1 cut(s) | 512 |
| NlaIII | CATG | 3 cut(s) | 61, 395, 566 |
| NlaIV | GGNNCC | 5 cut(s) | 153, 309, 324, 375, 495 |
| NmuCI | GTSAC | 2 cut(s) | 181, 352 |
| NspI | RCATGY | 1 cut(s) | 61 |
| PaeI | GCATGC | 1 cut(s) | 61 |
| PciSI | GCTCTTC | 1 cut(s) | 278 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 551 |
| PflFI | GACNNNGTC | 2 cut(s) | 139, 478 |
| PkrI | GCNGC | 1 cut(s) | 568 |
| PleI | GAGTC | 2 cut(s) | 148, 487 |
| PpsI | GAGTC | 2 cut(s) | 148, 487 |
| PpuMI | RGGWCCY | 1 cut(s) | 152 |
| Psp5II | RGGWCCY | 1 cut(s) | 152 |
| Psp6I | CCWGG | 1 cut(s) | 535 |
| PspGI | CCWGG | 1 cut(s) | 535 |
| PspN4I | GGNNCC | 5 cut(s) | 153, 309, 324, 375, 495 |
| PspPI | GGNCC | 4 cut(s) | 152, 323, 494, 539 |
| PspPPI | RGGWCCY | 1 cut(s) | 152 |
| PsuI | RGATCY | 1 cut(s) | 512 |
| PsyI | GACNNNGTC | 2 cut(s) | 139, 478 |
| RseI | CAYNNNNRTG | 1 cut(s) | 56 |
| SapI | GCTCTTC | 1 cut(s) | 278 |
| SaqAI | TTAA | 4 cut(s) | 12, 234, 405, 579 |
| SatI | GCNGC | 1 cut(s) | 567 |
| Sau3AI | GATC | 1 cut(s) | 512 |
| Sau96I | GGNCC | 4 cut(s) | 152, 323, 494, 539 |
| SchI | GAGTC | 2 cut(s) | 149, 488 |
| ScrFI | CCNGG | 4 cut(s) | 165, 336, 507, 537 |
| SetI | ASST | 1 cut(s) | 538 |
| SexAI | ACCWGGT | 1 cut(s) | 535 |
| SinI | GGWCC | 4 cut(s) | 152, 323, 494, 539 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 56 |
| SphI | GCATGC | 1 cut(s) | 61 |
| SspMI | CTAG | 2 cut(s) | 195, 622 |
| StyD4I | CCNGG | 4 cut(s) | 163, 334, 505, 535 |
| TaqI | TCGA | 4 cut(s) | 143, 278, 449, 482 |
| Tru1I | TTAA | 4 cut(s) | 12, 234, 405, 579 |
| Tru9I | TTAA | 4 cut(s) | 12, 234, 405, 579 |
| TscAI | CASTG | 1 cut(s) | 39 |
| TseFI | GTSAC | 2 cut(s) | 181, 352 |
| TseI | GCWGC | 1 cut(s) | 566 |
| Tsp45I | GTSAC | 2 cut(s) | 181, 352 |
| TspDTI | ATGAA | 2 cut(s) | 114, 128 |
| TspGWI | ACGGA | 3 cut(s) | 152, 320, 491 |
| TspRI | CASTG | 1 cut(s) | 39 |
| Tth111I | GACNNNGTC | 2 cut(s) | 139, 478 |
| VpaK11BI | GGWCC | 4 cut(s) | 152, 323, 494, 539 |
| XceI | RCATGY | 1 cut(s) | 61 |
| XspI | CTAG | 2 cut(s) | 195, 622 |