Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002713

Physical Location & Seq

Genomic Coordinates Reverse (-)

17674254 .. 17679887

Gene Structure 5634 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g24600.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGACCATGTCTTTGGCCTCCAAGGTCATATTTGAATATTTCTCAGAGAAGCAACAAAAGCCGGCTCTGAGATTTATTCGGAGTGTGTGGAGACTCTCTTTCTCCCATGGAGCCACTGCTGACACAAAGCACTATATTGTTTACATGGGGCACCACTCGCACCCCAACTCGGAATCTGTCATCAGACATAACCATGAGATTCTTGCTTCAGTCACTGACAGGCAGGACACTAATTTGACTACTTATGCAGATTTATCATCTCCCTCAGCTTCGAGTACTGGTGGACAAGAAGCAGCACTTAACCACTACAGTAAAAGTTTTCAAGGATTCTCAGCCAAGCTCACTCCATATCAAGCTCAACAACTTGCTGAACATGATTCAGTTATTTCGGTGTTTGAGAGCAAGACAAACAAACTGAGCACAACACATTCCTGGGGTTTTCTAGGCGTAGACTCTACTCCAAGTTACAATCAAATGCCAATGGATTCAAAATCCAATGTCATTGTTGGTGTAATTGACACTGGAGTTTGGCCAGAGTCAAAGAGCTTCAGTGACGAAGGATTAGGACCTGTGCCTGATAAATTCAAAGGAGAGTGTGTTACTGGTCAGAATTTTACATTGGCCAACTGCAACAGAAAAATCATAGGTTCTCGCTTCTATTATCACGGATTTGAAGTAGAAAATGGAAAACTTGAGTCCTTTGCGCCATTACCTTTCTTCAGATCAGCTCGAGATGCTGATGGACATGGGAGTCACACTGCCTCGACGATAGCTGGATCCACAGTAACTAACGTCAGTTTCTTGGGAATGGCCACAGGAACTGCAAGAGGCGGTGCACAAAGCGCCAGACTTGCTATCTACAAGGCATGTTGGTTTGACTTGTGTAGTGATGCAGATATTCTTTCAGCTCTGGATGATGCCATTGGCGATGGTGTTGATGTTCTCTCCCTTTCCCTTGGCCCTGATCCTCCACAGCCTACGTATTTTGAAAATGCAATCTCCGTTGGAAGTTTCCATGCATTCCAGAAAGGAATAGTTGTTTCTGCATCAGCAGGGAACTCTGGTTTCCCTAGTACTGCATGCAATGTTGCTCCCTGGATCCTCACTGTTGCTGCAAGCACTTTGGATAGAGAATTCCATTCAAACGTGTATCTGGGAAATTCACAAATATTAAAGGGTTCCTCTCTAAACCCACTCAATATGGAGAAGTCTTATGGTTTGATAGCTGCGAGTGTTGCAGCTGCCCCTGGAGTCACAGCGAAGAATGCAAGCTTCTGCAAGGACAGTACTCTACATGCAAGCTTAATTAAGGGGAAAATTGTCGTGTGCACCTTCGAGACATTTACTGATAACCGAAGGGAGAAAAGCATAGTTGTAAGACAAGGTGGTGGTGTAGGAATGATTCTTGTGGATCCATTTCTCAAAGATGTCGGATTTCAGTTTGTCATCCCCGCCACTCTTATTGGTCAAGAGGAAGCAGCACAACTCCAAGCATACATGATGACAGCGAAGTATCCAGTTGCTAGAATATCACAAACGACTACAATACTGAAAACTAAACCTGCACCAGAAATGGCAGTGTTCTCTTCCATGGGGCCAAATATCATAACCCCAGACATCATCAAACCAGATATTACAGGACCTGGGGTAAATATCTTAGCAGCATGGTCTCCGGTCGCAACTACAGCCACAGCAGAAAGGTCCGTCAATTATAATATCATTTCTGGCACCTCGATGTCTTGTCCACATGTATCTGCAGTTGCAGCAACATTGAAATCGTACCGACCTACCTGGAGTCCAGCAGCCATAATGTCTGCAATAATGACAACAGCAACAGTCCTAGATAACAACAAACTCCCTATTGGGAGAGATCCAAATGGCACCCCTACTACACCTTTTGACTACGGATCTGGGCACATTAATCCAGTTGCAGTAATTGAACCTGGACTTGTATATGATTTTGATTCCCATGACATAATCAGTTTTCTCTGCAGCACTGGGGCTAGCTCTTTGCAACTGAAAAACCTCACGGGTAATCTAGTCGATTGCCAGAAGTCTTCTATGCCTTCCTACAATTTTAATTACCCTTCTATTGGTGTGTCAAAAATGAGTGGAAGGCTATCTGTTCAGCGAACAGTCACTTATTATGGTAAAGGCCCAACAGTGTATGCTGCATATGTAGACTATCCAGCAGGTGTAAATGTTACAGTTACACCAGCTAAACTGAAGTTTACAAAGACTGGGGAAAAGATGTATTTCCGTGTAGATTTCACCCCCCTTAAGAATAGTAATGGAAGCTATGTGTTTGGAGCTCTAACATGGAGTAATGGTCTTCAGAATGTCAGGAGTCCTATTGCTCTTAATGTGATTTCAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

793

Amino Acids

84.98

Weight (kDa)

7.92

Isoelectric Point (pI)

37.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	45 - 139	2.2e-13	Peptidase inhibitor I9
Peptidase_S8	PF00082	165 - 636	9e-43	Subtilase family
PA	PF02225	422 - 496	5.8e-07	PA domain
fn3_6	PF17766	692 - 786	9.2e-28	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34560 AT2G34560
fragaria_vesca	FvH4_3g05520 FvH4_3g05520 FvH4_3g05520 FvH4_3g05520 FvH4_3g05520 FvH4_3g24600
malus_domestica	MD05G1283700.v1.1 MD10G1261900.v1.1 MD11G1161400.v1.1 MD17G1012100.v1.1
prunus_persica	Prupe.4G080800_v2.0.a1 Prupe.4G080800_v2.0.a1 Prupe.6G127100_v2.0.a1
pyrus_communis	pycom05g26280 pycom07g21360 pycom10g21820 pycom11g13380
rosa_chinensis	RchiOBHm_Chr5g0014221 RchiOBHm_Chr5g0044151
rosa_laevigata	RLG00000032091 RLG00000034247
rosa_multiflora	Rmu_sc0000939.1_g000032 Rmu_sc0014980.1_g000003 Rmu_ssc0000120.1_g000006
rosa_roxburghii	Rroxscaffold_1G00036900 Rroxscaffold_1G00062360
rosa_rugosa	Rorug05G0016300 Rorug05G0210900 Rorug05G0211000
rosa_samantha	Rh5AG295800 Rh5BG303600 Rh5CG119300 Rh5CG330600 Rh5DG312400
rosa_wichuraiana	Rw5G009640 Rw5G027350 Rw5G027420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1713
AarI	CACCTGC	1 cut(s)	2183
AasI	GACNNNNNNGTC	1 cut(s)	750
Acc36I	ACCTGC	2 cut(s)	1570, 2183
AccB1I	GGYRCC	3 cut(s)	150, 1727, 1880
AccI	GTMKAC	2 cut(s)	450, 2181
AciI	CCGC	2 cut(s)	831, 1452
AclWI	GGATC	9 cut(s)	771, 784, 959, 1093, 1106, 1406, 1419, 1865, 1915
AcoI	YGGCCR	3 cut(s)	530, 621, 810
AcsI	RAATTY	4 cut(s)	581, 610, 1133, 1159
AcuI	CTGAAG	5 cut(s)	192, 532, 703, 2246, 2318
AfaI	GTAC	4 cut(s)	277, 1075, 1288, 1781
AfiI	CCNNNNNNNGG	2 cut(s)	169, 2093
AflII	CTTAAG	1 cut(s)	2279
AflIII	ACRYGT	2 cut(s)	1146, 1747
AjnI	CCWGG	6 cut(s)	431, 1094, 1246, 1642, 1790, 1942
AjuI	GAANNNNNNNTTGG	2 cut(s)	602, 634
Alw21I	GWGCWC	4 cut(s)	422, 838, 1331, 2314
Alw26I	GTCTC	3 cut(s)	85, 1331, 1674
Alw44I	GTGCAC	2 cut(s)	834, 1327
AlwI	GGATC	9 cut(s)	771, 784, 959, 1093, 1106, 1406, 1419, 1865, 1915
AlwNI	CAGNNNCTG	3 cut(s)	215, 821, 1643
Ama87I	CYCGRG	1 cut(s)	729
AoxI	GGCC	7 cut(s)	15, 530, 621, 810, 958, 1595, 2155
ApaLI	GTGCAC	2 cut(s)	834, 1327
ApoI	RAATTY	4 cut(s)	581, 610, 1133, 1159
ArsI	GACNNNNNNTTYG	1 cut(s)	27
AseI	ATTAAT	1 cut(s)	1920
AspLEI	GCGC	2 cut(s)	706, 845
AspS9I	GGNCC	6 cut(s)	566, 959, 1595, 1640, 1701, 2156
AsuHPI	GGTGA	1 cut(s)	2263
AsuNHI	GCTAGC	1 cut(s)	2003
AvaI	CYCGRG	1 cut(s)	729
AvaII	GGWCC	3 cut(s)	566, 1640, 1701
BaeGI	GKGCMC	4 cut(s)	153, 838, 1331, 1917
BalI	TGGCCA	3 cut(s)	532, 623, 812
BamHI	GGATCC	3 cut(s)	776, 1098, 1411
BanI	GGYRCC	3 cut(s)	150, 1727, 1880
BanII	GRGCYC	1 cut(s)	2314
BbsI	GAAGAC	2 cut(s)	2049, 2324
Bbv12I	GWGCWC	4 cut(s)	422, 838, 1331, 2314
BbvCI	CCTCAGC	1 cut(s)	265
BccI	CCATC	2 cut(s)	734, 923
BciT130I	CCWGG	6 cut(s)	433, 1096, 1248, 1644, 1792, 1944
BciVI	GTATCC	1 cut(s)	1524
BcoDI	GTCTC	3 cut(s)	85, 1331, 1674
BfaI	CTAG	6 cut(s)	443, 1071, 1524, 1841, 2004, 2039
BfmI	CTRYAG	4 cut(s)	307, 1683, 1755, 1990
BfoI	RGCGCY	1 cut(s)	846
BfrI	CTTAAG	1 cut(s)	2279
BfuAI	ACCTGC	2 cut(s)	1570, 2183
BfuI	GTATCC	1 cut(s)	1524
BmcAI	AGTACT	3 cut(s)	277, 1075, 1288
Bme1390I	CCNGG	6 cut(s)	433, 1096, 1248, 1644, 1792, 1944
Bme18I	GGWCC	3 cut(s)	566, 1640, 1701
BmeT110I	CYCGRG	1 cut(s)	729
BmgT120I	GGNCC	6 cut(s)	566, 959, 1595, 1640, 1701, 2156
BmiI	GGNNCC	9 cut(s)	112, 152, 778, 1100, 1180, 1413, 1596, 1729, 1882
BmrFI	CCNGG	6 cut(s)	433, 1096, 1248, 1644, 1792, 1944
BmrI	ACTGGG	2 cut(s)	2007, 2250
BmsI	GCATC	4 cut(s)	724, 880, 907, 1055
BmtI	GCTAGC	1 cut(s)	2007
BmuI	ACTGGG	2 cut(s)	2007, 2250
BpiI	GAAGAC	2 cut(s)	2049, 2324
BpmI	CTGGAG	3 cut(s)	543, 1269, 1813
Bpu10I	CCTNAGC	1 cut(s)	265
BpuEI	CTTGAG	1 cut(s)	713
BsaAI	YACGTR	1 cut(s)	981
BsaI	GGTCTC	1 cut(s)	1674
BsaJI	CCNNGG	8 cut(s)	21, 106, 432, 955, 1094, 1246, 1590, 1643
BsaWI	WCCGGW	1 cut(s)	1672
BsaXI	ACNNNNNCTCC	4 cut(s)	582, 612, 2314, 2344
Bsc4I	CCNNNNNNNGG	2 cut(s)	169, 2093
Bse118I	RCCGGY	1 cut(s)	61
Bse1I	ACTGG	7 cut(s)	283, 526, 607, 1517, 1925, 2002, 2245
Bse3DI	GCAATG	1 cut(s)	1090
BseBI	CCWGG	6 cut(s)	433, 1096, 1248, 1644, 1792, 1944
BseDI	CCNNGG	8 cut(s)	21, 106, 432, 955, 1094, 1246, 1590, 1643
BseGI	GGATG	2 cut(s)	919, 1446
BseLI	CCNNNNNNNGG	2 cut(s)	169, 2093
BseMI	GCAATG	1 cut(s)	1090
BseMII	CTCAG	5 cut(s)	57, 59, 279, 345, 407
BseNI	ACTGG	7 cut(s)	283, 526, 607, 1517, 1925, 2002, 2245
BseSI	GKGCMC	4 cut(s)	153, 838, 1331, 1917
BsgI	GTGCAG	1 cut(s)	1548
Bsh1285I	CGRYCG	1 cut(s)	1677
BshFI	GGCC	7 cut(s)	17, 532, 623, 812, 960, 1597, 2157
BshNI	GGYRCC	3 cut(s)	150, 1727, 1880
BsiEI	CGRYCG	1 cut(s)	1677
BsiHKAI	GWGCWC	4 cut(s)	422, 838, 1331, 2314
BsiHKCI	CYCGRG	1 cut(s)	729
BsiSI	CCGG	2 cut(s)	62, 1673
BslI	CCNNNNNNNGG	2 cut(s)	169, 2093
BsmAI	GTCTC	3 cut(s)	85, 1331, 1674
BsmI	GAATGC	2 cut(s)	1019, 1270
BsnI	GGCC	7 cut(s)	17, 532, 623, 812, 960, 1597, 2157
Bso31I	GGTCTC	1 cut(s)	1674
BsoBI	CYCGRG	1 cut(s)	729
Bsp1286I	GDGCHC	6 cut(s)	153, 422, 838, 1331, 1917, 2314
Bsp143I	GATC	7 cut(s)	722, 776, 964, 1098, 1411, 1870, 1907
Bsp19I	CCATGG	2 cut(s)	106, 1590
BspACI	CCGC	2 cut(s)	831, 1452
BspANI	GGCC	7 cut(s)	17, 532, 623, 812, 960, 1597, 2157
BspCNI	CTCAG	5 cut(s)	56, 60, 278, 344, 408
BspLI	GGNNCC	9 cut(s)	112, 152, 778, 1100, 1180, 1413, 1596, 1729, 1882
BspMAI	CTGCAG	2 cut(s)	1759, 1994
BspMI	ACCTGC	2 cut(s)	1570, 2183
BspOI	GCTAGC	1 cut(s)	2007
BspPI	GGATC	9 cut(s)	771, 784, 959, 1093, 1106, 1406, 1419, 1865, 1915
BspT107I	GGYRCC	3 cut(s)	150, 1727, 1880
BspTI	CTTAAG	1 cut(s)	2279
BspTNI	GGTCTC	1 cut(s)	1674
BsrDI	GCAATG	1 cut(s)	1090
BsrFI	RCCGGY	1 cut(s)	61
BsrI	ACTGG	7 cut(s)	283, 526, 607, 1517, 1925, 2002, 2245
BssAI	RCCGGY	1 cut(s)	61
BssECI	CCNNGG	8 cut(s)	21, 106, 432, 955, 1094, 1246, 1590, 1643
BssMI	GATC	7 cut(s)	722, 776, 964, 1098, 1411, 1870, 1907
BssT1I	CCWWGG	4 cut(s)	21, 106, 955, 1590
Bst2UI	CCWGG	6 cut(s)	433, 1096, 1248, 1644, 1792, 1944
Bst4CI	ACNGT	8 cut(s)	311, 784, 1108, 1286, 1837, 2137, 2164, 2209
Bst6I	CTCTTC	1 cut(s)	1591
BstAFI	CTTAAG	1 cut(s)	2279
BstBAI	YACGTR	1 cut(s)	981
BstC8I	GCNNGC	6 cut(s)	63, 1081, 1117, 1270, 1300, 2005
BstDEI	CTNAG	6 cut(s)	43, 68, 265, 331, 416, 1657
BstDSI	CCRYGG	2 cut(s)	106, 1590
BstF5I	GGATG	2 cut(s)	919, 1446
BstH2I	RGCGCY	1 cut(s)	846
BstHHI	GCGC	2 cut(s)	706, 845
BstKTI	GATC	7 cut(s)	725, 779, 967, 1101, 1414, 1873, 1910
BstMAI	GTCTC	3 cut(s)	85, 1331, 1674
BstMBI	GATC	7 cut(s)	722, 776, 964, 1098, 1411, 1870, 1907
BstMCI	CGRYCG	1 cut(s)	1677
BstMWI	GCNNNNNNNGC	9 cut(s)	58, 157, 734, 842, 851, 1235, 1265, 1685, 1763
BstNI	CCWGG	6 cut(s)	433, 1096, 1248, 1644, 1792, 1944
BstNSI	RCATGY	4 cut(s)	870, 1083, 1298, 1751
BstSCI	CCNGG	6 cut(s)	431, 1094, 1246, 1642, 1790, 1942
BstSFI	CTRYAG	4 cut(s)	307, 1683, 1755, 1990
BstSLI	GKGCMC	4 cut(s)	153, 838, 1331, 1917
BstSNI	TACGTA	1 cut(s)	981
BstV2I	GAAGAC	2 cut(s)	2049, 2324
BstX2I	RGATCY	5 cut(s)	776, 1098, 1411, 1870, 1907
BstXI	CCANNNNNNTGG	1 cut(s)	13
BstYI	RGATCY	5 cut(s)	776, 1098, 1411, 1870, 1907
BsuI	GTATCC	1 cut(s)	1524
BsuRI	GGCC	7 cut(s)	17, 532, 623, 812, 960, 1597, 2157
BtgI	CCRYGG	2 cut(s)	106, 1590
BtgZI	GCGATG	1 cut(s)	942
BtsCI	GGATG	2 cut(s)	919, 1446
BtsI	GCAGTG	3 cut(s)	114, 756, 1584
BtsIMutI	CAGTG	9 cut(s)	114, 213, 519, 556, 756, 1104, 1584, 1995, 2169
BveI	ACCTGC	2 cut(s)	1570, 2183
Cac8I	GCNNGC	6 cut(s)	63, 1081, 1117, 1270, 1300, 2005
CaiI	CAGNNNCTG	3 cut(s)	215, 821, 1643
CfoI	GCGC	2 cut(s)	706, 845
Cfr10I	RCCGGY	1 cut(s)	61
Cfr13I	GGNCC	6 cut(s)	566, 959, 1595, 1640, 1701, 2156
Csp6I	GTAC	4 cut(s)	276, 1074, 1287, 1780
CspCI	CAANNNNNGTGG	2 cut(s)	1444, 1479
CviQI	GTAC	4 cut(s)	276, 1074, 1287, 1780
DdeI	CTNAG	6 cut(s)	43, 68, 265, 331, 416, 1657
DpnI	GATC	7 cut(s)	724, 778, 966, 1100, 1413, 1872, 1909
DpnII	GATC	7 cut(s)	722, 776, 964, 1098, 1411, 1870, 1907
DrdI	GACNNNNNNGTC	1 cut(s)	750
DseDI	GACNNNNNNGTC	1 cut(s)	750
EaeI	YGGCCR	3 cut(s)	530, 621, 810
Eam1104I	CTCTTC	1 cut(s)	1591
EarI	CTCTTC	1 cut(s)	1591
Ecl136II	GAGCTC	1 cut(s)	2312
Eco105I	TACGTA	1 cut(s)	981
Eco130I	CCWWGG	4 cut(s)	21, 106, 955, 1590
Eco24I	GRGCYC	1 cut(s)	2314
Eco31I	GGTCTC	1 cut(s)	1674
Eco47I	GGWCC	3 cut(s)	566, 1640, 1701
Eco53kI	GAGCTC	1 cut(s)	2312
Eco57I	CTGAAG	5 cut(s)	192, 532, 703, 2246, 2318
Eco88I	CYCGRG	1 cut(s)	729
EcoICRI	GAGCTC	1 cut(s)	2312
EcoO109I	RGGNCCY	2 cut(s)	566, 1640
EcoRI	GAATTC	1 cut(s)	1133
EcoRII	CCWGG	6 cut(s)	431, 1094, 1246, 1642, 1790, 1942
EcoT14I	CCWWGG	4 cut(s)	21, 106, 955, 1590
EcoT22I	ATGCAT	1 cut(s)	1021
EcoT38I	GRGCYC	1 cut(s)	2314
ErhI	CCWWGG	4 cut(s)	21, 106, 955, 1590
FalI	AAGNNNNNCTT	2 cut(s)	282, 314
FauI	CCCGC	1 cut(s)	1459
FauNDI	CATATG	1 cut(s)	2176
FblI	GTMKAC	2 cut(s)	450, 2181
FokI	GGATG	2 cut(s)	926, 1433
FriOI	GRGCYC	1 cut(s)	2314
FspBI	CTAG	6 cut(s)	443, 1071, 1524, 1841, 2004, 2039
GlaI	GCGC	2 cut(s)	705, 844
GsuI	CTGGAG	3 cut(s)	543, 1269, 1813
HaeII	RGCGCY	1 cut(s)	846
HaeIII	GGCC	7 cut(s)	17, 532, 623, 812, 960, 1597, 2157
HapII	CCGG	2 cut(s)	62, 1673
HhaI	GCGC	2 cut(s)	706, 845
Hin6I	GCGC	2 cut(s)	704, 843
HinP1I	GCGC	2 cut(s)	704, 843
HindIII	AAGCTT	2 cut(s)	1270, 1300
HpaII	CCGG	2 cut(s)	62, 1673
HphI	GGTGA	1 cut(s)	2263
Hpy166II	GTNNAC	8 cut(s)	142, 284, 451, 836, 1329, 1745, 2182, 2232
Hpy188I	TCNGA	9 cut(s)	46, 69, 81, 172, 185, 609, 722, 1433, 2337
Hpy188III	TCNNGA	6 cut(s)	731, 911, 1024, 1336, 1469, 2344
Hpy8I	GTNNAC	8 cut(s)	142, 284, 451, 836, 1329, 1745, 2182, 2232
Hpy99I	CGWCG	1 cut(s)	769
HpyAV	CCTTC	6 cut(s)	551, 1342, 1350, 2076, 2097, 2109
HpyCH4III	ACNGT	8 cut(s)	311, 784, 1108, 1286, 1837, 2137, 2164, 2209
HpyCH4IV	ACGT	3 cut(s)	792, 980, 1146
HpyF10VI	GCNNNNNNNGC	9 cut(s)	58, 157, 734, 842, 851, 1235, 1265, 1685, 1763
HpyF3I	CTNAG	6 cut(s)	43, 68, 265, 331, 416, 1657
HpySE526I	ACGT	3 cut(s)	792, 980, 1146
HspAI	GCGC	2 cut(s)	704, 843
KroI	GCCGGC	1 cut(s)	61
KroNI	GCCGGC	1 cut(s)	63
Kzo9I	GATC	7 cut(s)	722, 776, 964, 1098, 1411, 1870, 1907
LmnI	GCTCC	3 cut(s)	110, 1096, 2309
LweI	GCATC	4 cut(s)	724, 880, 907, 1055
MaeI	CTAG	6 cut(s)	443, 1071, 1524, 1841, 2004, 2039
MaeII	ACGT	3 cut(s)	792, 980, 1146
MalI	GATC	7 cut(s)	724, 778, 966, 1100, 1413, 1872, 1909
MboI	GATC	7 cut(s)	722, 776, 964, 1098, 1411, 1870, 1907
MboII	GAAGA	5 cut(s)	709, 1273, 1578, 2049, 2324
MflI	RGATCY	5 cut(s)	776, 1098, 1411, 1870, 1907
MhlI	GDGCHC	6 cut(s)	153, 422, 838, 1331, 1917, 2314
MlsI	TGGCCA	3 cut(s)	532, 623, 812
MluNI	TGGCCA	3 cut(s)	532, 623, 812
MlyI	GAGTC	8 cut(s)	87, 446, 545, 704, 760, 1260, 1804, 2356
MmeI	TCCRAC	2 cut(s)	985, 1411
Mox20I	TGGCCA	3 cut(s)	532, 623, 812
Mph1103I	ATGCAT	1 cut(s)	1021
MroNI	GCCGGC	1 cut(s)	61
MscI	TGGCCA	3 cut(s)	532, 623, 812
MseI	TTAA	8 cut(s)	300, 1172, 1304, 1308, 1920, 2079, 2280, 2361
MslI	CAYNNNNRTG	2 cut(s)	192, 1733
Msp20I	TGGCCA	3 cut(s)	532, 623, 812
MspA1I	CMGCKG	1 cut(s)	1241
MspCI	CTTAAG	1 cut(s)	2279
MspI	CCGG	2 cut(s)	62, 1673
MspR9I	CCNGG	6 cut(s)	433, 1096, 1248, 1644, 1792, 1944
Mva1269I	GAATGC	2 cut(s)	1019, 1270
MvaI	CCWGG	6 cut(s)	433, 1096, 1248, 1644, 1792, 1944
MwoI	GCNNNNNNNGC	9 cut(s)	58, 157, 734, 842, 851, 1235, 1265, 1685, 1763
NaeI	GCCGGC	1 cut(s)	63
NcoI	CCATGG	2 cut(s)	106, 1590
NdeI	CATATG	1 cut(s)	2176
NdeII	GATC	7 cut(s)	722, 776, 964, 1098, 1411, 1870, 1907
NgoMIV	GCCGGC	1 cut(s)	61
NheI	GCTAGC	1 cut(s)	2003
NlaIV	GGNNCC	9 cut(s)	112, 152, 778, 1100, 1180, 1413, 1596, 1729, 1882
NmuCI	GTSAC	5 cut(s)	211, 551, 752, 1252, 2137
NsiI	ATGCAT	1 cut(s)	1021
NspI	RCATGY	4 cut(s)	870, 1083, 1298, 1751
PacI	TTAATTAA	1 cut(s)	1308
PaeI	GCATGC	1 cut(s)	1083
PaeR7I	CTCGAG	1 cut(s)	729
PaqCI	CACCTGC	1 cut(s)	2183
PciI	ACATGT	1 cut(s)	1747
PctI	GAATGC	2 cut(s)	1019, 1270
PdiI	GCCGGC	1 cut(s)	63
PfeI	GAWTC	7 cut(s)	173, 199, 327, 377, 485, 1402, 1964
PflFI	GACNNNGTC	1 cut(s)	7
PleI	GAGTC	8 cut(s)	87, 446, 544, 703, 759, 1259, 1803, 2355
PpsI	GAGTC	8 cut(s)	87, 446, 544, 703, 759, 1259, 1803, 2355
Ppu21I	YACGTR	1 cut(s)	981
PpuMI	RGGWCCY	2 cut(s)	566, 1640
PscI	ACATGT	1 cut(s)	1747
PshBI	ATTAAT	1 cut(s)	1920
PsiI	TTATAA	1 cut(s)	1713
Psp124BI	GAGCTC	1 cut(s)	2314
Psp5II	RGGWCCY	2 cut(s)	566, 1640
Psp6I	CCWGG	6 cut(s)	431, 1094, 1246, 1642, 1790, 1942
PspGI	CCWGG	6 cut(s)	431, 1094, 1246, 1642, 1790, 1942
PspN4I	GGNNCC	9 cut(s)	112, 152, 778, 1100, 1180, 1413, 1596, 1729, 1882
PspPI	GGNCC	6 cut(s)	566, 959, 1595, 1640, 1701, 2156
PspPPI	RGGWCCY	2 cut(s)	566, 1640
PstI	CTGCAG	2 cut(s)	1759, 1994
PstNI	CAGNNNCTG	3 cut(s)	215, 821, 1643
PsuI	RGATCY	5 cut(s)	776, 1098, 1411, 1870, 1907
PsyI	GACNNNGTC	1 cut(s)	7
PvuII	CAGCTG	1 cut(s)	1241
RsaI	GTAC	4 cut(s)	277, 1075, 1288, 1781
RsaNI	GTAC	4 cut(s)	276, 1074, 1287, 1780
RseI	CAYNNNNRTG	2 cut(s)	192, 1733
SacI	GAGCTC	1 cut(s)	2314
SaqAI	TTAA	8 cut(s)	300, 1172, 1304, 1308, 1920, 2079, 2280, 2361
Sau3AI	GATC	7 cut(s)	722, 776, 964, 1098, 1411, 1870, 1907
Sau96I	GGNCC	6 cut(s)	566, 959, 1595, 1640, 1701, 2156
ScaI	AGTACT	3 cut(s)	277, 1075, 1288
SchI	GAGTC	8 cut(s)	87, 446, 545, 704, 760, 1260, 1804, 2356
ScrFI	CCNGG	6 cut(s)	433, 1096, 1248, 1644, 1792, 1944
SduI	GDGCHC	6 cut(s)	153, 422, 838, 1331, 1917, 2314
SfaNI	GCATC	4 cut(s)	724, 880, 907, 1055
SfcI	CTRYAG	4 cut(s)	307, 1683, 1755, 1990
Sfr274I	CTCGAG	1 cut(s)	729
SinI	GGWCC	3 cut(s)	566, 1640, 1701
SlaI	CTCGAG	1 cut(s)	729
SmiMI	CAYNNNNRTG	2 cut(s)	192, 1733
SmlI	CTYRAG	3 cut(s)	692, 729, 2279
SmoI	CTYRAG	3 cut(s)	692, 729, 2279
SnaBI	TACGTA	1 cut(s)	981
SphI	GCATGC	1 cut(s)	1083
SsiI	CCGC	2 cut(s)	831, 1452
SspI	AATATT	2 cut(s)	38, 1170
SspMI	CTAG	6 cut(s)	443, 1071, 1524, 1841, 2004, 2039
SstI	GAGCTC	1 cut(s)	2314
StyD4I	CCNGG	6 cut(s)	431, 1094, 1246, 1642, 1790, 1942
StyI	CCWWGG	4 cut(s)	21, 106, 955, 1590
TaaI	ACNGT	8 cut(s)	311, 784, 1108, 1286, 1837, 2137, 2164, 2209
TaiI	ACGT	3 cut(s)	795, 983, 1149
TaqI	TCGA	6 cut(s)	272, 730, 764, 1335, 1733, 2043
TatI	WGTACW	3 cut(s)	275, 1073, 1286
TfiI	GAWTC	7 cut(s)	173, 199, 327, 377, 485, 1402, 1964
Tru1I	TTAA	8 cut(s)	300, 1172, 1304, 1308, 1920, 2079, 2280, 2361
Tru9I	TTAA	8 cut(s)	300, 1172, 1304, 1308, 1920, 2079, 2280, 2361
TscAI	CASTG	9 cut(s)	121, 220, 526, 556, 763, 1111, 1584, 2002, 2169
TseFI	GTSAC	5 cut(s)	211, 551, 752, 1252, 2137
Tsp45I	GTSAC	5 cut(s)	211, 551, 752, 1252, 2137
TspGWI	ACGGA	5 cut(s)	681, 991, 1693, 1920, 2249
TspRI	CASTG	9 cut(s)	121, 220, 526, 556, 763, 1111, 1584, 2002, 2169
Tth111I	GACNNNGTC	1 cut(s)	7
Vha464I	CTTAAG	1 cut(s)	2279
VneI	GTGCAC	2 cut(s)	834, 1327
VpaK11BI	GGWCC	3 cut(s)	566, 1640, 1701
VspI	ATTAAT	1 cut(s)	1920
XapI	RAATTY	4 cut(s)	581, 610, 1133, 1159
XceI	RCATGY	4 cut(s)	870, 1083, 1298, 1751
XhoI	CTCGAG	1 cut(s)	729
XmiI	GTMKAC	2 cut(s)	450, 2181
XspI	CTAG	6 cut(s)	443, 1071, 1524, 1841, 2004, 2039
ZrmI	AGTACT	3 cut(s)	277, 1075, 1288
Zsp2I	ATGCAT	1 cut(s)	1021

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.