Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002713

Physical Location & Seq

Genomic Coordinates Reverse (-)

39350887 .. 39354609

Gene Structure 3723 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ32236

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGGGGCACCACTCGCACACCAACTCGGAATCTGTCATCAGAGCTAACCATGAGATTCTTGCTTCAGTCACCGGCAGTACCGGTGGACAAGAAGCAGCACTTAACCATTACAGTAAAAGTTTCCAAGGCTTCTCAGCCAAGCTTACACCAGATCAAGCTCAGCAACTTGCTGAACATGATTTGGTTATTTCGGTGTTTGAGAGCAAGACAAACAAACTGAGCACAACACATTCCTGGGATTTTCTAGGCGTAGACGCTACTCCTAATTACAATCAAATGCCAATGGGTTCCAAATCCAATGTCATTGTTGGTGTAATTGACAGTGGAGTTTGGCCAGAGTCAGAGAGCTTCAATGATGAAGGATTAGGACCTGTGCCAGCTAAATTCAGAGGAGAGTGTGTTACTGGTCAGAATTTTACATTGGCCAACTGCAACAGAAAAATCATAGGCTCTCGCTTCTATTATCATGGATTTGAAGTAGAAAATGGGCCACTTGAGTCCTTTGCACCTCTTCCTTTCTTCAGATCAGCTCGAGATGCTGATGGACATGGGAGTCACACTGCCTCCACGATAGCTGGATCCACAGTAACTAATGTCAGCTTCTTGGGAATGGCCACAGGAACTGCAAGAGGCGGTGCAGAAAGTGCCAGACTTGCTATCTACAAGGCATGTTGGTTCGGCTTGTGTAGTGATGCAGACCTTCTTTCAGCTCTGGATGATGCCATTGGTGATGGTGTCGATATTCTGTCCCTTTCCCTTGGTCCTGATCCTCCACAGCCAACATATTTTGAAGATGCAGTCTCCATTGGAGCTTTCCATGCATTCCAGAAAGGAATACTTGTTTCTGCATCAGCAGGGAACTCTGGTTTCCCCAGTACTGCATGCAATGTAGCTCCCTGGATTCTCACTATTGCTGCAAGCACTTTGGATAGAGAATTCCATTCAAACGTTTATCTGGGAAATTCACAAATACTAAAGGGTTCCTCTTTAAACCCACTAAAGATGGATAAGTCTTACAGTTTGATTGCTGCAAGTGTTGCAGCTGCCCCTGGAGTCACAGCAAAGAATGCAAGCTTCTGCAAGGACAAAACTCTAAATGCAAGCTTAATTAAGGGAAAAATCGTTGTGTGCACCTTTGAGACATTTACCGACAACCGAAGGGAAAAAAGTATAGTTGTAAGACAAGGTGGTGGTGTAGGAATGATTCTTGTGGATCCATTTCTCAAAGATGTTGGCTTTGAGTTTGTCATCCCGGCCACCCTAATTGGTCAAGAAGAAGCAGCACAGCTTCAAGCATACATGACAACAGAGAAGTACCCAGTTGCTAGAATCTCACAAACGACAACAATTCTGAAAACTAAACCTGCACCTGAGATGGCAGTGTTCTCCTCCATGGGGCCAAATATCATAACCCCAGACATTATCAAACCAGATATTACAGGACCTGGGGTGAATATCTTAGCAGCATGGTCTCCGGTCTCAACTACACCCACAGCAGAAAGGTCTGTCAATTATAACATCATTTCTGGCACCTCGATGTCTTGTCCACATGTATCTGCAGTTGCAGCAACTTTGAAATCATACCGACCTTCCTGGAGTCCAGCAGCCATAATGTCTGCAATAATGACAACATCAACAACTCTAGACAACAACAAACGCCCTATTGGGAGAGATCCAAATGGCACCCCTACCACACCTTTTGACTACGGATCTGGACACATTAACCCAGTTGCAGCAATTGATCCTGGACTTGTATATGATTTTGATTCCCATGACATAATCGACTTTCTCTGCAGCACTGGGGCTAGCACTCTGCAACTGAAAAACCTCACGGGTAATCTAGTTTATTGCCAGAAGCCTTCTATACCTTCCTACAATTTTAACTACCCTTCCATTGGCGTGTCAAAAATGAGTGGAAGGCTATCTGTTCAGCGTACAGTTACTTATTACGGCAAAGGCCCAACGGTATATGCTGCATATGTAGACTACCCAGCAGGTGTAAATGTTACAGTAACACCAGCTAAGCTCAAGTTTACAAATACCGGGGAAAAGATGTCTTTCTGTGTTGATTTCACCCCCCTCAAGAATAGTAATGGAAGCTTTGTGTTTGGAGCTCTGACATGGAGTAATGGTATTCAGAAGGTTAGGAGTCCTATTGGTCTTAATGTGCTTTCAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

726

Amino Acids

77.27

Weight (kDa)

6.44

Isoelectric Point (pI)

34.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	3 - 73	3.1e-11	Peptidase inhibitor I9
Peptidase_S8	PF00082	99 - 552	2.1e-42	Subtilase family
PA	PF02225	354 - 430	2.4e-07	PA domain
fn3_6	PF17766	626 - 719	3.5e-27	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002713)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34560 AT2G34560
fragaria_vesca	FvH4_3g05520 FvH4_3g05520 FvH4_3g05520 FvH4_3g05520 FvH4_3g05520 FvH4_3g24600
malus_domestica	MD05G1283700.v1.1 MD10G1261900.v1.1 MD11G1161400.v1.1 MD17G1012100.v1.1
prunus_persica	Prupe.4G080800_v2.0.a1 Prupe.4G080800_v2.0.a1 Prupe.6G127100_v2.0.a1
pyrus_communis	pycom05g26280 pycom07g21360 pycom10g21820 pycom11g13380
rosa_chinensis	RchiOBHm_Chr5g0014221 RchiOBHm_Chr5g0044151
rosa_laevigata	RLG00000032091 RLG00000034247
rosa_multiflora	Rmu_sc0000939.1_g000032 Rmu_sc0014980.1_g000003 Rmu_ssc0000120.1_g000006
rosa_roxburghii	Rroxscaffold_1G00036900 Rroxscaffold_1G00062360
rosa_rugosa	Rorug05G0016300 Rorug05G0210900 Rorug05G0211000
rosa_samantha	Rh5AG295800 Rh5BG303600 Rh5CG119300 Rh5CG330600 Rh5DG312400
rosa_wichuraiana	Rw5G009640 Rw5G027350 Rw5G027420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1515
AarI	CACCTGC	1 cut(s)	1985
AasI	GACNNNNNNGTC	1 cut(s)	552
Acc36I	ACCTGC	2 cut(s)	1372, 1985
AccB1I	GGYRCC	3 cut(s)	6, 1529, 1682
AccI	GTMKAC	2 cut(s)	252, 1983
AciI	CCGC	1 cut(s)	633
AclI	AACGTT	1 cut(s)	948
AclWI	GGATC	8 cut(s)	573, 586, 761, 1208, 1221, 1667, 1717, 1736
AcoI	YGGCCR	4 cut(s)	332, 423, 612, 1254
AcsI	RAATTY	4 cut(s)	383, 412, 935, 961
AcuI	CTGAAG	2 cut(s)	48, 505
AfaI	GTAC	4 cut(s)	79, 877, 1316, 1936
AfiI	CCNNNNNNNGG	2 cut(s)	1395, 1895
AflIII	ACRYGT	1 cut(s)	1549
AgeI	ACCGGT	1 cut(s)	80
AgsI	TTSAA	7 cut(s)	352, 476, 791, 945, 1292, 1576, 2175
AjnI	CCWGG	6 cut(s)	233, 896, 1048, 1444, 1592, 1744
AjuI	GAANNNNNNNTTGG	2 cut(s)	404, 436
Alw21I	GWGCWC	3 cut(s)	224, 1133, 2116
Alw26I	GTCTC	4 cut(s)	805, 1133, 1476, 1483
Alw44I	GTGCAC	1 cut(s)	1129
AlwI	GGATC	8 cut(s)	573, 586, 761, 1208, 1221, 1667, 1717, 1736
AlwNI	CAGNNNCTG	2 cut(s)	623, 1445
Ama87I	CYCGRG	1 cut(s)	531
AoxI	GGCC	7 cut(s)	332, 423, 488, 612, 1254, 1397, 1957
ApaLI	GTGCAC	1 cut(s)	1129
ApoI	RAATTY	4 cut(s)	383, 412, 935, 961
ArsI	GACNNNNNNTTYG	2 cut(s)	285, 317
AsiGI	ACCGGT	1 cut(s)	80
AspS9I	GGNCC	6 cut(s)	368, 488, 761, 1397, 1442, 1958
AsuC2I	CCSGG	2 cut(s)	1253, 2044
AsuHPI	GGTGA	4 cut(s)	61, 740, 1462, 2065
AsuNHI	GCTAGC	1 cut(s)	1805
AvaI	CYCGRG	1 cut(s)	531
AvaII	GGWCC	3 cut(s)	368, 761, 1442
BaeGI	GKGCMC	2 cut(s)	9, 1133
BalI	TGGCCA	3 cut(s)	334, 425, 614
BamHI	GGATCC	2 cut(s)	578, 1213
BanI	GGYRCC	3 cut(s)	6, 1529, 1682
BanII	GRGCYC	1 cut(s)	2116
Bbv12I	GWGCWC	3 cut(s)	224, 1133, 2116
BccI	CCATC	4 cut(s)	536, 725, 997, 1369
BceAI	ACGGC	1 cut(s)	1966
BciT130I	CCWGG	6 cut(s)	235, 898, 1050, 1446, 1594, 1746
BcnI	CCSGG	2 cut(s)	1253, 2044
BcoDI	GTCTC	4 cut(s)	805, 1133, 1476, 1483
BfaI	CTAG	5 cut(s)	245, 1326, 1643, 1806, 1841
BfmI	CTRYAG	2 cut(s)	1557, 1792
BfuAI	ACCTGC	2 cut(s)	1372, 1985
BlpI	GCTNAGC	2 cut(s)	159, 2022
BmcAI	AGTACT	1 cut(s)	877
Bme1390I	CCNGG	8 cut(s)	235, 898, 1050, 1253, 1446, 1594, 1746, 2044
Bme18I	GGWCC	3 cut(s)	368, 761, 1442
BmeT110I	CYCGRG	1 cut(s)	531
BmgT120I	GGNCC	6 cut(s)	368, 488, 761, 1397, 1442, 1958
BmiI	GGNNCC	8 cut(s)	8, 289, 580, 982, 1215, 1398, 1531, 1684
BmrFI	CCNGG	8 cut(s)	235, 898, 1050, 1253, 1446, 1594, 1746, 2044
BmrI	ACTGGG	4 cut(s)	867, 1313, 1721, 1809
BmsI	GCATC	5 cut(s)	526, 682, 709, 784, 857
BmtI	GCTAGC	1 cut(s)	1809
BmuI	ACTGGG	4 cut(s)	867, 1313, 1721, 1809
BpmI	CTGGAG	2 cut(s)	1071, 1615
Bpu1102I	GCTNAGC	2 cut(s)	159, 2022
BpuEI	CTTGAG	3 cut(s)	515, 2012, 2066
BpuMI	CCSGG	2 cut(s)	1253, 2044
BsaI	GGTCTC	2 cut(s)	1476, 1483
BsaJI	CCNNGG	8 cut(s)	124, 234, 757, 896, 1048, 1392, 1445, 2043
BsaWI	WCCGGW	2 cut(s)	80, 1474
BsaXI	ACNNNNNCTCC	6 cut(s)	384, 414, 548, 578, 2116, 2146
Bsc4I	CCNNNNNNNGG	2 cut(s)	1395, 1895
Bse118I	RCCGGY	2 cut(s)	71, 80
Bse1I	ACTGG	5 cut(s)	409, 873, 1319, 1727, 1804
Bse3DI	GCAATG	1 cut(s)	892
BseBI	CCWGG	6 cut(s)	235, 898, 1050, 1446, 1594, 1746
BseDI	CCNNGG	8 cut(s)	124, 234, 757, 896, 1048, 1392, 1445, 2043
BseGI	GGATG	2 cut(s)	721, 1248
BseLI	CCNNNNNNNGG	2 cut(s)	1395, 1895
BseMI	GCAATG	1 cut(s)	892
BseMII	CTCAG	4 cut(s)	147, 173, 209, 1362
BseNI	ACTGG	5 cut(s)	409, 873, 1319, 1727, 1804
BseRI	GAGGAG	2 cut(s)	405, 1378
BseSI	GKGCMC	2 cut(s)	9, 1133
BseYI	CCCAGC	1 cut(s)	1990
BsgI	GTGCAG	2 cut(s)	657, 1350
BshFI	GGCC	7 cut(s)	334, 425, 490, 614, 1256, 1399, 1959
BshNI	GGYRCC	3 cut(s)	6, 1529, 1682
BshTI	ACCGGT	1 cut(s)	80
BsiHKAI	GWGCWC	3 cut(s)	224, 1133, 2116
BsiHKCI	CYCGRG	1 cut(s)	531
BsiSI	CCGG	5 cut(s)	72, 81, 1253, 1475, 2043
BslFI	GGGAC	1 cut(s)	733
BslI	CCNNNNNNNGG	2 cut(s)	1395, 1895
BsmAI	GTCTC	4 cut(s)	805, 1133, 1476, 1483
BsmFI	GGGAC	1 cut(s)	733
BsmI	GAATGC	2 cut(s)	821, 1072
BsnI	GGCC	7 cut(s)	334, 425, 490, 614, 1256, 1399, 1959
Bso31I	GGTCTC	2 cut(s)	1476, 1483
BsoBI	CYCGRG	1 cut(s)	531
Bsp1286I	GDGCHC	4 cut(s)	9, 224, 1133, 2116
Bsp143I	GATC	8 cut(s)	151, 524, 578, 766, 1213, 1672, 1709, 1741
Bsp1720I	GCTNAGC	2 cut(s)	159, 2022
Bsp19I	CCATGG	1 cut(s)	1392
BspACI	CCGC	1 cut(s)	633
BspANI	GGCC	7 cut(s)	334, 425, 490, 614, 1256, 1399, 1959
BspCNI	CTCAG	4 cut(s)	146, 172, 210, 1363
BspLI	GGNNCC	8 cut(s)	8, 289, 580, 982, 1215, 1398, 1531, 1684
BspMAI	CTGCAG	2 cut(s)	1561, 1796
BspMI	ACCTGC	2 cut(s)	1372, 1985
BspOI	GCTAGC	1 cut(s)	1809
BspPI	GGATC	8 cut(s)	573, 586, 761, 1208, 1221, 1667, 1717, 1736
BspT107I	GGYRCC	3 cut(s)	6, 1529, 1682
BspTNI	GGTCTC	2 cut(s)	1476, 1483
BsrDI	GCAATG	1 cut(s)	892
BsrFI	RCCGGY	2 cut(s)	71, 80
BsrI	ACTGG	5 cut(s)	409, 873, 1319, 1727, 1804
BssAI	RCCGGY	2 cut(s)	71, 80
BssECI	CCNNGG	8 cut(s)	124, 234, 757, 896, 1048, 1392, 1445, 2043
BssMI	GATC	8 cut(s)	151, 524, 578, 766, 1213, 1672, 1709, 1741
BssT1I	CCWWGG	3 cut(s)	124, 757, 1392
Bst2UI	CCWGG	6 cut(s)	235, 898, 1050, 1446, 1594, 1746
Bst4CI	ACNGT	7 cut(s)	113, 323, 586, 1019, 1939, 1966, 2011
Bst6I	CTCTTC	1 cut(s)	516
BstAPI	GCANNNNNTGC	3 cut(s)	644, 1037, 1067
BstC8I	GCNNGC	6 cut(s)	378, 883, 919, 1072, 1102, 1807
BstDEI	CTNAG	6 cut(s)	133, 159, 218, 1371, 1459, 2022
BstDSI	CCRYGG	1 cut(s)	1392
BstF5I	GGATG	2 cut(s)	721, 1248
BstKTI	GATC	8 cut(s)	154, 527, 581, 769, 1216, 1675, 1712, 1744
BstMAI	GTCTC	4 cut(s)	805, 1133, 1476, 1483
BstMBI	GATC	8 cut(s)	151, 524, 578, 766, 1213, 1672, 1709, 1741
BstMWI	GCNNNNNNNGC	8 cut(s)	13, 536, 644, 653, 818, 1037, 1067, 1565
BstNI	CCWGG	6 cut(s)	235, 898, 1050, 1446, 1594, 1746
BstNSI	RCATGY	3 cut(s)	672, 885, 1553
BstSCI	CCNGG	8 cut(s)	233, 896, 1048, 1251, 1444, 1592, 1744, 2042
BstSFI	CTRYAG	2 cut(s)	1557, 1792
BstSLI	GKGCMC	2 cut(s)	9, 1133
BstX2I	RGATCY	4 cut(s)	578, 1213, 1672, 1709
BstYI	RGATCY	4 cut(s)	578, 1213, 1672, 1709
BsuRI	GGCC	7 cut(s)	334, 425, 490, 614, 1256, 1399, 1959
BtgI	CCRYGG	1 cut(s)	1392
BtsCI	GGATG	2 cut(s)	721, 1248
BtsI	GCAGTG	2 cut(s)	558, 1386
BtsIMutI	CAGTG	4 cut(s)	328, 558, 1386, 1797
BveI	ACCTGC	2 cut(s)	1372, 1985
Cac8I	GCNNGC	6 cut(s)	378, 883, 919, 1072, 1102, 1807
CaiI	CAGNNNCTG	2 cut(s)	623, 1445
Cfr10I	RCCGGY	2 cut(s)	71, 80
Cfr13I	GGNCC	6 cut(s)	368, 488, 761, 1397, 1442, 1958
CseI	GACGC	1 cut(s)	263
Csp6I	GTAC	4 cut(s)	78, 876, 1315, 1935
CspAI	ACCGGT	1 cut(s)	80
CspCI	CAANNNNNGTGG	4 cut(s)	1246, 1281, 1681, 1716
CviQI	GTAC	4 cut(s)	78, 876, 1315, 1935
DdeI	CTNAG	6 cut(s)	133, 159, 218, 1371, 1459, 2022
DpnI	GATC	8 cut(s)	153, 526, 580, 768, 1215, 1674, 1711, 1743
DpnII	GATC	8 cut(s)	151, 524, 578, 766, 1213, 1672, 1709, 1741
DraI	TTTAAA	1 cut(s)	990
DrdI	GACNNNNNNGTC	1 cut(s)	552
DseDI	GACNNNNNNGTC	1 cut(s)	552
EaeI	YGGCCR	4 cut(s)	332, 423, 612, 1254
Eam1104I	CTCTTC	1 cut(s)	516
EarI	CTCTTC	1 cut(s)	516
Ecl136II	GAGCTC	1 cut(s)	2114
Eco130I	CCWWGG	3 cut(s)	124, 757, 1392
Eco24I	GRGCYC	1 cut(s)	2116
Eco31I	GGTCTC	2 cut(s)	1476, 1483
Eco47I	GGWCC	3 cut(s)	368, 761, 1442
Eco53kI	GAGCTC	1 cut(s)	2114
Eco57I	CTGAAG	2 cut(s)	48, 505
Eco88I	CYCGRG	1 cut(s)	531
EcoICRI	GAGCTC	1 cut(s)	2114
EcoO109I	RGGNCCY	2 cut(s)	368, 1442
EcoRI	GAATTC	1 cut(s)	935
EcoRII	CCWGG	6 cut(s)	233, 896, 1048, 1444, 1592, 1744
EcoT14I	CCWWGG	3 cut(s)	124, 757, 1392
EcoT22I	ATGCAT	1 cut(s)	823
EcoT38I	GRGCYC	1 cut(s)	2116
ErhI	CCWWGG	3 cut(s)	124, 757, 1392
FalI	AAGNNNNNCTT	4 cut(s)	84, 116, 822, 854
FaqI	GGGAC	1 cut(s)	733
FauNDI	CATATG	1 cut(s)	1978
FblI	GTMKAC	2 cut(s)	252, 1983
FokI	GGATG	2 cut(s)	728, 1235
FriOI	GRGCYC	1 cut(s)	2116
FspBI	CTAG	5 cut(s)	245, 1326, 1643, 1806, 1841
GsaI	CCCAGC	1 cut(s)	1994
GsuI	CTGGAG	2 cut(s)	1071, 1615
HaeIII	GGCC	7 cut(s)	334, 425, 490, 614, 1256, 1399, 1959
HapII	CCGG	5 cut(s)	72, 81, 1253, 1475, 2043
HgaI	GACGC	1 cut(s)	263
HindIII	AAGCTT	4 cut(s)	140, 1072, 1102, 2098
HpaII	CCGG	5 cut(s)	72, 81, 1253, 1475, 2043
HphI	GGTGA	4 cut(s)	61, 740, 1462, 2065
Hpy166II	GTNNAC	6 cut(s)	86, 253, 1131, 1547, 1984, 2034
Hpy188I	TCNGA	9 cut(s)	28, 41, 343, 389, 411, 524, 1353, 2118, 2139
Hpy188III	TCNNGA	8 cut(s)	533, 713, 764, 826, 1271, 1643, 1713, 2083
Hpy8I	GTNNAC	6 cut(s)	86, 253, 1131, 1547, 1984, 2034
HpyAV	CCTTC	9 cut(s)	353, 710, 1152, 1599, 1869, 1878, 1899, 1911, 2134
HpyCH4III	ACNGT	7 cut(s)	113, 323, 586, 1019, 1939, 1966, 2011
HpyCH4IV	ACGT	1 cut(s)	948
HpyF10VI	GCNNNNNNNGC	8 cut(s)	13, 536, 644, 653, 818, 1037, 1067, 1565
HpyF3I	CTNAG	6 cut(s)	133, 159, 218, 1371, 1459, 2022
HpySE526I	ACGT	1 cut(s)	948
Kzo9I	GATC	8 cut(s)	151, 524, 578, 766, 1213, 1672, 1709, 1741
LmnI	GCTCC	3 cut(s)	809, 898, 2111
LweI	GCATC	5 cut(s)	526, 682, 709, 784, 857
MaeI	CTAG	5 cut(s)	245, 1326, 1643, 1806, 1841
MaeII	ACGT	1 cut(s)	948
MaeIII	GTNAC	8 cut(s)	67, 400, 554, 586, 1054, 1939, 2005, 2011
MalI	GATC	8 cut(s)	153, 526, 580, 768, 1215, 1674, 1711, 1743
MboI	GATC	8 cut(s)	151, 524, 578, 766, 1213, 1672, 1709, 1741
MboII	GAAGA	4 cut(s)	503, 511, 803, 1286
MfeI	CAATTG	1 cut(s)	1737
MflI	RGATCY	4 cut(s)	578, 1213, 1672, 1709
MhlI	GDGCHC	4 cut(s)	9, 224, 1133, 2116
MlsI	TGGCCA	3 cut(s)	334, 425, 614
MluNI	TGGCCA	3 cut(s)	334, 425, 614
MlyI	GAGTC	6 cut(s)	347, 506, 562, 1062, 1606, 2158
Mox20I	TGGCCA	3 cut(s)	334, 425, 614
Mph1103I	ATGCAT	1 cut(s)	823
MscI	TGGCCA	3 cut(s)	334, 425, 614
MseI	TTAA	7 cut(s)	102, 989, 1106, 1110, 1722, 1881, 2163
MslI	CAYNNNNRTG	2 cut(s)	1535, 1898
Msp20I	TGGCCA	3 cut(s)	334, 425, 614
MspA1I	CMGCKG	1 cut(s)	1043
MspI	CCGG	5 cut(s)	72, 81, 1253, 1475, 2043
MspR9I	CCNGG	8 cut(s)	235, 898, 1050, 1253, 1446, 1594, 1746, 2044
MunI	CAATTG	1 cut(s)	1737
Mva1269I	GAATGC	2 cut(s)	821, 1072
MvaI	CCWGG	6 cut(s)	235, 898, 1050, 1446, 1594, 1746
MwoI	GCNNNNNNNGC	8 cut(s)	13, 536, 644, 653, 818, 1037, 1067, 1565
NciI	CCSGG	2 cut(s)	1253, 2044
NcoI	CCATGG	1 cut(s)	1392
NdeI	CATATG	1 cut(s)	1978
NdeII	GATC	8 cut(s)	151, 524, 578, 766, 1213, 1672, 1709, 1741
NheI	GCTAGC	1 cut(s)	1805
NlaIV	GGNNCC	8 cut(s)	8, 289, 580, 982, 1215, 1398, 1531, 1684
NmuCI	GTSAC	3 cut(s)	67, 554, 1054
NsiI	ATGCAT	1 cut(s)	823
NspI	RCATGY	3 cut(s)	672, 885, 1553
PacI	TTAATTAA	1 cut(s)	1110
PaeI	GCATGC	1 cut(s)	885
PaeR7I	CTCGAG	1 cut(s)	531
PaqCI	CACCTGC	1 cut(s)	1985
PciI	ACATGT	1 cut(s)	1549
PctI	GAATGC	2 cut(s)	821, 1072
PfeI	GAWTC	6 cut(s)	29, 55, 901, 1204, 1329, 1766
PfoI	TCCNGGA	2 cut(s)	1592, 1744
PinAI	ACCGGT	1 cut(s)	80
PleI	GAGTC	6 cut(s)	346, 505, 561, 1061, 1605, 2157
PpsI	GAGTC	6 cut(s)	346, 505, 561, 1061, 1605, 2157
PpuMI	RGGWCCY	2 cut(s)	368, 1442
PscI	ACATGT	1 cut(s)	1549
PsiI	TTATAA	1 cut(s)	1515
Psp124BI	GAGCTC	1 cut(s)	2116
Psp1406I	AACGTT	1 cut(s)	948
Psp5II	RGGWCCY	2 cut(s)	368, 1442
Psp6I	CCWGG	6 cut(s)	233, 896, 1048, 1444, 1592, 1744
PspFI	CCCAGC	1 cut(s)	1990
PspGI	CCWGG	6 cut(s)	233, 896, 1048, 1444, 1592, 1744
PspN4I	GGNNCC	8 cut(s)	8, 289, 580, 982, 1215, 1398, 1531, 1684
PspPI	GGNCC	6 cut(s)	368, 488, 761, 1397, 1442, 1958
PspPPI	RGGWCCY	2 cut(s)	368, 1442
PstI	CTGCAG	2 cut(s)	1561, 1796
PstNI	CAGNNNCTG	2 cut(s)	623, 1445
PsuI	RGATCY	4 cut(s)	578, 1213, 1672, 1709
PvuII	CAGCTG	1 cut(s)	1043
RsaI	GTAC	4 cut(s)	79, 877, 1316, 1936
RsaNI	GTAC	4 cut(s)	78, 876, 1315, 1935
RseI	CAYNNNNRTG	2 cut(s)	1535, 1898
SacI	GAGCTC	1 cut(s)	2116
SaqAI	TTAA	7 cut(s)	102, 989, 1106, 1110, 1722, 1881, 2163
Sau3AI	GATC	8 cut(s)	151, 524, 578, 766, 1213, 1672, 1709, 1741
Sau96I	GGNCC	6 cut(s)	368, 488, 761, 1397, 1442, 1958
ScaI	AGTACT	1 cut(s)	877
SchI	GAGTC	6 cut(s)	347, 506, 562, 1062, 1606, 2158
ScrFI	CCNGG	8 cut(s)	235, 898, 1050, 1253, 1446, 1594, 1746, 2044
SduI	GDGCHC	4 cut(s)	9, 224, 1133, 2116
SfaNI	GCATC	5 cut(s)	526, 682, 709, 784, 857
SfcI	CTRYAG	2 cut(s)	1557, 1792
Sfr274I	CTCGAG	1 cut(s)	531
SinI	GGWCC	3 cut(s)	368, 761, 1442
SlaI	CTCGAG	1 cut(s)	531
SmiMI	CAYNNNNRTG	2 cut(s)	1535, 1898
SmlI	CTYRAG	4 cut(s)	494, 531, 2027, 2081
SmoI	CTYRAG	4 cut(s)	494, 531, 2027, 2081
SphI	GCATGC	1 cut(s)	885
SsiI	CCGC	1 cut(s)	633
SspMI	CTAG	5 cut(s)	245, 1326, 1643, 1806, 1841
SstI	GAGCTC	1 cut(s)	2116
StyD4I	CCNGG	8 cut(s)	233, 896, 1048, 1251, 1444, 1592, 1744, 2042
StyI	CCWWGG	3 cut(s)	124, 757, 1392
TaaI	ACNGT	7 cut(s)	113, 323, 586, 1019, 1939, 1966, 2011
TaiI	ACGT	1 cut(s)	951
TaqI	TCGA	4 cut(s)	532, 738, 1535, 1782
TatI	WGTACW	1 cut(s)	875
TfiI	GAWTC	6 cut(s)	29, 55, 901, 1204, 1329, 1766
Tru1I	TTAA	7 cut(s)	102, 989, 1106, 1110, 1722, 1881, 2163
Tru9I	TTAA	7 cut(s)	102, 989, 1106, 1110, 1722, 1881, 2163
TscAI	CASTG	4 cut(s)	328, 565, 1386, 1804
TseFI	GTSAC	3 cut(s)	67, 554, 1054
Tsp45I	GTSAC	3 cut(s)	67, 554, 1054
TspDTI	ATGAA	1 cut(s)	372
TspGWI	ACGGA	1 cut(s)	1722
TspRI	CASTG	4 cut(s)	328, 565, 1386, 1804
VneI	GTGCAC	1 cut(s)	1129
VpaK11BI	GGWCC	3 cut(s)	368, 761, 1442
XapI	RAATTY	4 cut(s)	383, 412, 935, 961
XbaI	TCTAGA	1 cut(s)	1642
XceI	RCATGY	3 cut(s)	672, 885, 1553
XhoI	CTCGAG	1 cut(s)	531
XmiI	GTMKAC	2 cut(s)	252, 1983
XspI	CTAG	5 cut(s)	245, 1326, 1643, 1806, 1841
ZrmI	AGTACT	1 cut(s)	877
Zsp2I	ATGCAT	1 cut(s)	823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.