Katanin p60 ATPase-containing subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G34560 AT2G34560 |
| fragaria_vesca | FvH4_3g05520 FvH4_3g05520 FvH4_3g05520 FvH4_3g05520 FvH4_3g05520 FvH4_3g24600 |
| malus_domestica | MD05G1283700.v1.1 MD10G1261900.v1.1 MD11G1161400.v1.1 MD17G1012100.v1.1 |
| prunus_persica | Prupe.4G080800_v2.0.a1 Prupe.4G080800_v2.0.a1 Prupe.6G127100_v2.0.a1 |
| pyrus_communis | pycom05g26280 pycom07g21360 pycom10g21820 pycom11g13380 |
| rosa_chinensis | RchiOBHm_Chr5g0014221 RchiOBHm_Chr5g0044151 |
| rosa_laevigata | RLG00000032091 RLG00000034247 |
| rosa_multiflora | Rmu_sc0000939.1_g000032 Rmu_sc0014980.1_g000003 Rmu_ssc0000120.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00036900 Rroxscaffold_1G00062360 |
| rosa_rugosa | Rorug05G0016300 Rorug05G0210900 Rorug05G0211000 |
| rosa_samantha | Rh5AG295800 Rh5BG303600 Rh5CG119300 Rh5CG330600 Rh5DG312400 |
| rosa_wichuraiana | Rw5G009640 Rw5G027350 Rw5G027420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 229, 645 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 27 |
| AccII | CGCG | 2 cut(s) | 778, 1116 |
| AciI | CCGC | 4 cut(s) | 86, 92, 275, 778 |
| AclI | AACGTT | 1 cut(s) | 406 |
| AclWI | GGATC | 1 cut(s) | 894 |
| AcoI | YGGCCR | 2 cut(s) | 3, 189 |
| AcsI | RAATTY | 1 cut(s) | 864 |
| AcyI | GRCGYC | 1 cut(s) | 850 |
| AfaI | GTAC | 1 cut(s) | 452 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 27, 98, 479, 509, 823, 846, 925, 1100 |
| AgsI | TTSAA | 8 cut(s) | 209, 302, 565, 742, 968, 1058, 1138, 1189 |
| AjnI | CCWGG | 4 cut(s) | 36, 213, 338, 502 |
| AluBI | AGCT | 8 cut(s) | 119, 182, 225, 637, 916, 946, 1133, 1169 |
| AluI | AGCT | 8 cut(s) | 119, 182, 225, 637, 916, 946, 1133, 1169 |
| Alw21I | GWGCWC | 2 cut(s) | 227, 918 |
| Alw26I | GTCTC | 2 cut(s) | 288, 1030 |
| AlwI | GGATC | 1 cut(s) | 894 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 27 |
| AoxI | GGCC | 5 cut(s) | 3, 189, 496, 531, 1148 |
| ApeKI | GCWGC | 5 cut(s) | 806, 836, 1019, 1027, 1130 |
| ApoI | RAATTY | 1 cut(s) | 864 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1074 |
| AspS9I | GGNCC | 3 cut(s) | 30, 497, 1103 |
| AsuHPI | GGTGA | 1 cut(s) | 462 |
| AvaII | GGWCC | 2 cut(s) | 30, 1103 |
| AxyI | CCTNAGG | 2 cut(s) | 1080, 1095 |
| BalI | TGGCCA | 1 cut(s) | 191 |
| BanI | GGYRCC | 2 cut(s) | 229, 645 |
| BanII | GRGCYC | 2 cut(s) | 227, 918 |
| BbsI | GAAGAC | 2 cut(s) | 749, 1065 |
| Bbv12I | GWGCWC | 2 cut(s) | 227, 918 |
| BbvI | GCAGC | 5 cut(s) | 793, 848, 1006, 1039, 1142 |
| BccI | CCATC | 5 cut(s) | 200, 664, 757, 761, 1159 |
| BceAI | ACGGC | 1 cut(s) | 518 |
| BcgI | CGANNNNNNTGC | 7 cut(s) | 30, 219, 253, 391, 425, 990, 1024 |
| BciT130I | CCWGG | 4 cut(s) | 38, 215, 340, 504 |
| BclI | TGATCA | 1 cut(s) | 265 |
| BcoDI | GTCTC | 2 cut(s) | 288, 1030 |
| BfaI | CTAG | 1 cut(s) | 642 |
| BisI | GCNGC | 6 cut(s) | 92, 807, 837, 1020, 1028, 1131 |
| BlsI | GCNGC | 6 cut(s) | 93, 808, 838, 1021, 1029, 1132 |
| BmcAI | AGTACT | 1 cut(s) | 452 |
| Bme1390I | CCNGG | 4 cut(s) | 38, 215, 340, 504 |
| Bme18I | GGWCC | 2 cut(s) | 30, 1103 |
| BmgT120I | GGNCC | 3 cut(s) | 30, 497, 1103 |
| BmiI | GGNNCC | 5 cut(s) | 12, 90, 231, 647, 930 |
| BmrFI | CCNGG | 4 cut(s) | 38, 215, 340, 504 |
| BmrI | ACTGGG | 1 cut(s) | 15 |
| BmsI | GCATC | 4 cut(s) | 49, 390, 673, 823 |
| BmuI | ACTGGG | 1 cut(s) | 15 |
| BpiI | GAAGAC | 2 cut(s) | 749, 1065 |
| BpmI | CTGGAG | 2 cut(s) | 486, 947 |
| BpuEI | CTTGAG | 1 cut(s) | 875 |
| BsaHI | GRCGYC | 1 cut(s) | 850 |
| BsaJI | CCNNGG | 5 cut(s) | 6, 339, 473, 503, 821 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 27, 98, 479, 509, 823, 846, 925, 1100 |
| Bse118I | RCCGGY | 1 cut(s) | 292 |
| Bse1I | ACTGG | 4 cut(s) | 21, 463, 834, 930 |
| Bse21I | CCTNAGG | 2 cut(s) | 1080, 1095 |
| BseBI | CCWGG | 4 cut(s) | 38, 215, 340, 504 |
| BseDI | CCNNGG | 5 cut(s) | 6, 339, 473, 503, 821 |
| BseGI | GGATG | 3 cut(s) | 772, 838, 1090 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 27, 98, 479, 509, 823, 846, 925, 1100 |
| BseMII | CTCAG | 2 cut(s) | 621, 1071 |
| BseNI | ACTGG | 4 cut(s) | 21, 463, 834, 930 |
| BseRI | GAGGAG | 4 cut(s) | 23, 479, 926, 953 |
| BseXI | GCAGC | 5 cut(s) | 793, 848, 1006, 1039, 1142 |
| Bsh1236I | CGCG | 2 cut(s) | 778, 1116 |
| BshFI | GGCC | 5 cut(s) | 5, 191, 498, 533, 1150 |
| BshNI | GGYRCC | 2 cut(s) | 229, 645 |
| BsiHKAI | GWGCWC | 2 cut(s) | 227, 918 |
| BsiSI | CCGG | 1 cut(s) | 293 |
| BslFI | GGGAC | 2 cut(s) | 160, 520 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 27, 98, 479, 509, 823, 846, 925, 1100 |
| BsmAI | GTCTC | 2 cut(s) | 288, 1030 |
| BsmBI | CGTCTC | 1 cut(s) | 1030 |
| BsmFI | GGGAC | 2 cut(s) | 160, 520 |
| BsmI | GAATGC | 1 cut(s) | 403 |
| BsnI | GGCC | 5 cut(s) | 5, 191, 498, 533, 1150 |
| Bsp1286I | GDGCHC | 2 cut(s) | 227, 918 |
| Bsp143I | GATC | 2 cut(s) | 265, 899 |
| BspACI | CCGC | 4 cut(s) | 86, 92, 275, 778 |
| BspANI | GGCC | 5 cut(s) | 5, 191, 498, 533, 1150 |
| BspCNI | CTCAG | 2 cut(s) | 620, 1072 |
| BspFNI | CGCG | 2 cut(s) | 778, 1116 |
| BspLI | GGNNCC | 5 cut(s) | 12, 90, 231, 647, 930 |
| BspPI | GGATC | 1 cut(s) | 894 |
| BspT107I | GGYRCC | 2 cut(s) | 229, 645 |
| BsrFI | RCCGGY | 1 cut(s) | 292 |
| BsrI | ACTGG | 4 cut(s) | 21, 463, 834, 930 |
| BssAI | RCCGGY | 1 cut(s) | 292 |
| BssECI | CCNNGG | 5 cut(s) | 6, 339, 473, 503, 821 |
| BssMI | GATC | 2 cut(s) | 265, 899 |
| BssNI | GRCGYC | 1 cut(s) | 850 |
| BssT1I | CCWWGG | 1 cut(s) | 821 |
| Bst2UI | CCWGG | 4 cut(s) | 38, 215, 340, 504 |
| Bst4CI | ACNGT | 2 cut(s) | 474, 1041 |
| BstACI | GRCGYC | 1 cut(s) | 850 |
| BstC8I | GCNNGC | 4 cut(s) | 15, 294, 525, 639 |
| BstDEI | CTNAG | 3 cut(s) | 607, 1080, 1095 |
| BstDSI | CCRYGG | 1 cut(s) | 473 |
| BstF5I | GGATG | 3 cut(s) | 772, 838, 1090 |
| BstFNI | CGCG | 2 cut(s) | 778, 1116 |
| BstKTI | GATC | 2 cut(s) | 268, 902 |
| BstMAI | GTCTC | 2 cut(s) | 288, 1030 |
| BstMBI | GATC | 2 cut(s) | 265, 899 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 100, 188, 387, 643, 928 |
| BstNI | CCWGG | 4 cut(s) | 38, 215, 340, 504 |
| BstSCI | CCNGG | 4 cut(s) | 36, 213, 338, 502 |
| BstUI | CGCG | 2 cut(s) | 778, 1116 |
| BstV1I | GCAGC | 5 cut(s) | 793, 848, 1006, 1039, 1142 |
| BstV2I | GAAGAC | 2 cut(s) | 749, 1065 |
| BstX2I | RGATCY | 1 cut(s) | 899 |
| BstYI | RGATCY | 1 cut(s) | 899 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1080, 1095 |
| BsuRI | GGCC | 5 cut(s) | 5, 191, 498, 533, 1150 |
| BtgI | CCRYGG | 1 cut(s) | 473 |
| BtsCI | GGATG | 3 cut(s) | 772, 838, 1090 |
| BtsI | GCAGTG | 1 cut(s) | 429 |
| BtsIMutI | CAGTG | 3 cut(s) | 108, 429, 923 |
| Cac8I | GCNNGC | 4 cut(s) | 15, 294, 525, 639 |
| CaiI | CAGNNNCTG | 1 cut(s) | 27 |
| Cfr10I | RCCGGY | 1 cut(s) | 292 |
| Cfr13I | GGNCC | 3 cut(s) | 30, 497, 1103 |
| CseI | GACGC | 2 cut(s) | 784, 839 |
| Csp6I | GTAC | 1 cut(s) | 451 |
| CviAII | CATG | 8 cut(s) | 167, 263, 430, 650, 722, 841, 904, 1024 |
| CviQI | GTAC | 1 cut(s) | 451 |
| DdeI | CTNAG | 3 cut(s) | 607, 1080, 1095 |
| DpnI | GATC | 2 cut(s) | 267, 901 |
| DpnII | GATC | 2 cut(s) | 265, 899 |
| DraI | TTTAAA | 1 cut(s) | 46 |
| EaeI | YGGCCR | 2 cut(s) | 3, 189 |
| EciI | GGCGGA | 1 cut(s) | 101 |
| Ecl136II | GAGCTC | 2 cut(s) | 225, 916 |
| Eco130I | CCWWGG | 1 cut(s) | 821 |
| Eco24I | GRGCYC | 2 cut(s) | 227, 918 |
| Eco47I | GGWCC | 2 cut(s) | 30, 1103 |
| Eco53kI | GAGCTC | 2 cut(s) | 225, 916 |
| Eco81I | CCTNAGG | 2 cut(s) | 1080, 1095 |
| EcoICRI | GAGCTC | 2 cut(s) | 225, 916 |
| EcoRI | GAATTC | 1 cut(s) | 864 |
| EcoRII | CCWGG | 4 cut(s) | 36, 213, 338, 502 |
| EcoT14I | CCWWGG | 1 cut(s) | 821 |
| EcoT38I | GRGCYC | 2 cut(s) | 227, 918 |
| ErhI | CCWWGG | 1 cut(s) | 821 |
| Esp3I | CGTCTC | 1 cut(s) | 1030 |
| FaeI | CATG | 8 cut(s) | 170, 266, 433, 653, 725, 844, 907, 1027 |
| FaqI | GGGAC | 2 cut(s) | 160, 520 |
| FatI | CATG | 8 cut(s) | 166, 262, 429, 649, 721, 840, 903, 1023 |
| FbaI | TGATCA | 1 cut(s) | 265 |
| Fnu4HI | GCNGC | 6 cut(s) | 92, 807, 837, 1020, 1028, 1131 |
| FokI | GGATG | 3 cut(s) | 779, 845, 1097 |
| FriOI | GRGCYC | 2 cut(s) | 227, 918 |
| Fsp4HI | GCNGC | 6 cut(s) | 92, 807, 837, 1020, 1028, 1131 |
| FspBI | CTAG | 1 cut(s) | 642 |
| GluI | GCNGC | 6 cut(s) | 92, 807, 837, 1020, 1028, 1131 |
| GsuI | CTGGAG | 2 cut(s) | 486, 947 |
| HaeIII | GGCC | 5 cut(s) | 5, 191, 498, 533, 1150 |
| HapII | CCGG | 1 cut(s) | 293 |
| HgaI | GACGC | 2 cut(s) | 784, 839 |
| Hin1I | GRCGYC | 1 cut(s) | 850 |
| Hin1II | CATG | 8 cut(s) | 170, 266, 433, 653, 725, 844, 907, 1027 |
| HincII | GTYRAC | 1 cut(s) | 698 |
| HindII | GTYRAC | 1 cut(s) | 698 |
| HindIII | AAGCTT | 1 cut(s) | 944 |
| HinfI | GANTC | 3 cut(s) | 302, 358, 605 |
| HpaII | CCGG | 1 cut(s) | 293 |
| HphI | GGTGA | 1 cut(s) | 462 |
| Hpy166II | GTNNAC | 3 cut(s) | 108, 698, 788 |
| Hpy188I | TCNGA | 4 cut(s) | 256, 270, 610, 994 |
| Hpy188III | TCNNGA | 3 cut(s) | 362, 854, 1079 |
| Hpy8I | GTNNAC | 3 cut(s) | 108, 698, 788 |
| HpyAV | CCTTC | 5 cut(s) | 43, 616, 701, 827, 971 |
| HpyCH4III | ACNGT | 2 cut(s) | 474, 1041 |
| HpyCH4IV | ACGT | 2 cut(s) | 406, 700 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 100, 188, 387, 643, 928 |
| HpyF3I | CTNAG | 3 cut(s) | 607, 1080, 1095 |
| HpySE526I | ACGT | 2 cut(s) | 406, 700 |
| Hsp92I | GRCGYC | 1 cut(s) | 850 |
| Hsp92II | CATG | 8 cut(s) | 170, 266, 433, 653, 725, 844, 907, 1027 |
| KroI | GCCGGC | 1 cut(s) | 292 |
| KroNI | GCCGGC | 1 cut(s) | 294 |
| Ksp22I | TGATCA | 1 cut(s) | 265 |
| Kzo9I | GATC | 2 cut(s) | 265, 899 |
| LmnI | GCTCC | 6 cut(s) | 10, 88, 222, 913, 921, 928 |
| Lsp1109I | GCAGC | 5 cut(s) | 793, 848, 1006, 1039, 1142 |
| LweI | GCATC | 4 cut(s) | 49, 390, 673, 823 |
| MaeI | CTAG | 1 cut(s) | 642 |
| MaeII | ACGT | 2 cut(s) | 406, 700 |
| MaeIII | GTNAC | 2 cut(s) | 468, 1175 |
| MalI | GATC | 2 cut(s) | 267, 901 |
| MboI | GATC | 2 cut(s) | 265, 899 |
| MboII | GAAGA | 5 cut(s) | 754, 909, 1070, 1130, 1150 |
| MflI | RGATCY | 1 cut(s) | 899 |
| MhlI | GDGCHC | 2 cut(s) | 227, 918 |
| MlsI | TGGCCA | 1 cut(s) | 191 |
| MluCI | AATT | 6 cut(s) | 47, 203, 435, 678, 687, 864 |
| MluNI | TGGCCA | 1 cut(s) | 191 |
| MlyI | GAGTC | 1 cut(s) | 599 |
| MmeI | TCCRAC | 1 cut(s) | 1081 |
| Mox20I | TGGCCA | 1 cut(s) | 191 |
| MroNI | GCCGGC | 1 cut(s) | 292 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1074 |
| MscI | TGGCCA | 1 cut(s) | 191 |
| MseI | TTAA | 6 cut(s) | 45, 171, 369, 414, 438, 1043 |
| MslI | CAYNNNNRTG | 2 cut(s) | 240, 761 |
| Msp20I | TGGCCA | 1 cut(s) | 191 |
| MspA1I | CMGCKG | 1 cut(s) | 182 |
| MspI | CCGG | 1 cut(s) | 293 |
| MspR9I | CCNGG | 4 cut(s) | 38, 215, 340, 504 |
| Mva1269I | GAATGC | 1 cut(s) | 403 |
| MvaI | CCWGG | 4 cut(s) | 38, 215, 340, 504 |
| MvnI | CGCG | 2 cut(s) | 778, 1116 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 100, 188, 387, 643, 928 |
| NaeI | GCCGGC | 1 cut(s) | 294 |
| NdeII | GATC | 2 cut(s) | 265, 899 |
| NgoMIV | GCCGGC | 1 cut(s) | 292 |
| NlaIII | CATG | 8 cut(s) | 170, 266, 433, 653, 725, 844, 907, 1027 |
| NlaIV | GGNNCC | 5 cut(s) | 12, 90, 231, 647, 930 |
| NmeAIII | GCCGAG | 2 cut(s) | 31, 206 |
| NmuCI | GTSAC | 1 cut(s) | 468 |
| PctI | GAATGC | 1 cut(s) | 403 |
| PdiI | GCCGGC | 1 cut(s) | 294 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1074 |
| PfeI | GAWTC | 2 cut(s) | 302, 358 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 27 |
| PfoI | TCCNGGA | 1 cut(s) | 36 |
| PkrI | GCNGC | 6 cut(s) | 93, 808, 838, 1021, 1029, 1132 |
| PleI | GAGTC | 1 cut(s) | 599 |
| PpsI | GAGTC | 1 cut(s) | 599 |
| Psp124BI | GAGCTC | 2 cut(s) | 227, 918 |
| Psp1406I | AACGTT | 1 cut(s) | 406 |
| Psp6I | CCWGG | 4 cut(s) | 36, 213, 338, 502 |
| PspGI | CCWGG | 4 cut(s) | 36, 213, 338, 502 |
| PspN4I | GGNNCC | 5 cut(s) | 12, 90, 231, 647, 930 |
| PspPI | GGNCC | 3 cut(s) | 30, 497, 1103 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 741, 773 |
| PstNI | CAGNNNCTG | 1 cut(s) | 27 |
| PsuI | RGATCY | 1 cut(s) | 899 |
| PvuII | CAGCTG | 1 cut(s) | 182 |
| RsaI | GTAC | 1 cut(s) | 452 |
| RsaNI | GTAC | 1 cut(s) | 451 |
| RseI | CAYNNNNRTG | 2 cut(s) | 240, 761 |
| SacI | GAGCTC | 2 cut(s) | 227, 918 |
| SaqAI | TTAA | 6 cut(s) | 45, 171, 369, 414, 438, 1043 |
| SatI | GCNGC | 6 cut(s) | 92, 807, 837, 1020, 1028, 1131 |
| Sau3AI | GATC | 2 cut(s) | 265, 899 |
| Sau96I | GGNCC | 3 cut(s) | 30, 497, 1103 |
| ScaI | AGTACT | 1 cut(s) | 452 |
| SchI | GAGTC | 1 cut(s) | 599 |
| ScrFI | CCNGG | 4 cut(s) | 38, 215, 340, 504 |
| SduI | GDGCHC | 2 cut(s) | 227, 918 |
| SfaNI | GCATC | 4 cut(s) | 49, 390, 673, 823 |
| SinI | GGWCC | 2 cut(s) | 30, 1103 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 240, 761 |
| SmlI | CTYRAG | 1 cut(s) | 854 |
| SmoI | CTYRAG | 1 cut(s) | 854 |
| Sse9I | AATT | 6 cut(s) | 47, 203, 435, 678, 687, 864 |
| SsiI | CCGC | 4 cut(s) | 86, 92, 275, 778 |
| SspMI | CTAG | 1 cut(s) | 642 |
| SstI | GAGCTC | 2 cut(s) | 227, 918 |
| StyD4I | CCNGG | 4 cut(s) | 36, 213, 338, 502 |
| StyI | CCWWGG | 1 cut(s) | 821 |
| TaaI | ACNGT | 2 cut(s) | 474, 1041 |
| TaiI | ACGT | 2 cut(s) | 409, 703 |
| TaqI | TCGA | 2 cut(s) | 239, 1000 |
| TasI | AATT | 6 cut(s) | 47, 203, 435, 678, 687, 864 |
| TatI | WGTACW | 1 cut(s) | 450 |
| TauI | GCSGC | 1 cut(s) | 94 |
| TfiI | GAWTC | 2 cut(s) | 302, 358 |
| Tru1I | TTAA | 6 cut(s) | 45, 171, 369, 414, 438, 1043 |
| Tru9I | TTAA | 6 cut(s) | 45, 171, 369, 414, 438, 1043 |
| TscAI | CASTG | 3 cut(s) | 115, 429, 930 |
| TseFI | GTSAC | 1 cut(s) | 468 |
| TseI | GCWGC | 5 cut(s) | 806, 836, 1019, 1027, 1130 |
| Tsp45I | GTSAC | 1 cut(s) | 468 |
| TspDTI | ATGAA | 3 cut(s) | 690, 738, 1101 |
| TspGWI | ACGGA | 1 cut(s) | 761 |
| TspRI | CASTG | 3 cut(s) | 115, 429, 930 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 27 |
| VpaK11BI | GGWCC | 2 cut(s) | 30, 1103 |
| XapI | RAATTY | 1 cut(s) | 864 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 369 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1074 |
| XspI | CTAG | 1 cut(s) | 642 |
| ZrmI | AGTACT | 1 cut(s) | 452 |