Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0002352

Physical Location & Seq

Genomic Coordinates Reverse (-)

5963402 .. 5964862

Gene Structure 1461 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g06660.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGGCGGCCTTCTTTTTCTCTCTCTCAAGCCCACCACCGCCTCCGCCACTTTCCTTCTTCTTCTAATCACACTCCTCTCTTTTCTCTCCACACCCTCCGACGCCGACCCCGATTTCGGCGACATTGCCACCTCGTCTGCTCCACCGCTTCCGCCGCCGCCGCCTGTTAATGCAGCCAACGCCGTGAAGCCCAACTCGTTCCGGCCCAGCATAATAGTCATCGTCGGAGTTCTCACGACTTTGTTTACGGTGACTTTTCTCCTCCTCCTCTACGCCAAGCACTGCAAGCGCGGCAGCCTCGTCTTCATCGGAGGAGCCGCTAACTCCGGGCCTCCCCGCGCGGCGGCTCTGCGTAAAAACTCCGGAATCGACCGGACCGTCGTCGAGTCCCTCCCGGTTTTCCGGTTCGGGTCGCTCCGGGGACACAAGGACGGGCTGGAATGCGCTGTCTGCCTCACCCGATTCGAGCCCACGGAGGTCCTCCGCCTCCTCCCGAAATGCAAGCACGCCTTCCACGTCGAATGCGTCGACACGTGGCTCGACGCCCACTCCACTTGCCCGCTCTGCCGCTACCGGGTCGACCCGGAAGACATCCTCCTAATCGAACAACCGCCGACCAACAGCCAGCCCCAGACTCCGGCTCCCCACCACCAAAACGACGTCGTCATCGACATCGAAACCGACCGCCCGGGTTTCCGCCGCGTCTCGGGCCGCCACTCCTCCGCGTTAGAGCGGCAACCCGGCTCCACCAACTCCTCCTCCTCTCATGACAATACGTCGTCGTTCCGGAGATCCTTCGACGGCTGGACCTGGTTCCGGAAAAAGAGCGAAACAACCGCAACCGTCAGATACAGCACCGACCGTCCCAGAAAGGACGGCCTTCTTTTACCTCAAGACAAAACCCGGCTCGAGCACAGGATCATTGTCTCCTCCCCCAGATCAAGCACCACCAACGGCAACGGCTTCCACCAGCGCTGGAGCGACGTGGAGCCGTCGGATCTTCTCTACCTCACCTCCGAGATGATCATGAGCGATAACGGAGCGACACGTCAGCGTCAGCAGGAGGAGGAGGTACCGTTGCGCTGTGGGAATGGGGCCGTTCCAGCTAGGGATGGGAGTAATGGGTGCAGTGGCAGTGACAGTGGCAGAGGCGTAATAAAAGAGAGAAGCGTGTCGGAAATCACGGGGCTGAGCAGGTTCTCGAACAGAGGGAGCAGTAGTGAGCGGAGCAGTGATAATGACCAGCGCCACCGAAGCCAACGCCAAAACCAAAACCGGCAGAACCAACAGCGACAGCTCAGGCTCGCTTCCAGGTGGGTGGCTTGGATTTCGTCACGCCCACCACGTGTAGGGTCTGATCGTACGACTGCCACTGTTGCCGCTCCTCCTTCTTCCCCAACTACAGAGACTCCGCCGCGGATCCCTCCGCCACCGCCATTACCGACTGTGCCCACTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

487

Amino Acids

53.33

Weight (kDa)

9.58

Isoelectric Point (pI)

55.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	147 - 190	2e-13	Ring finger domain
zf-RING_11	PF17123	147 - 176	1.1e-09	RING-like zinc finger
zf-C3HC4_2	PF13923	147 - 189	4.2e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	148 - 189	2.3e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	160 - 190	5.8e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05810
fragaria_vesca	FvH4_4g06660
malus_domestica	MD13G1236900.v1.1 MD16G1242200.v1.1
prunus_persica	Prupe.1G069300_v2.0.a1
pyrus_communis	pycom13g20980 pycom16g20300
rosa_chinensis	RchiOBHm_Chr3g0495141 RchiOBHm_Chr4g0398561
rosa_laevigata	RLG00000009344 RLG00000026064 RLG00000029692 RLG00000030599 RLG00000032695 RLG00000032696
rosa_multiflora	Rmu_co8139468.1_g000001 Rmu_co8270033.1_g000001 Rmu_co8275827.1_g000001 Rmu_sc0000185.1_g000029 Rmu_sc0000990.1_g000016 Rmu_sc0005217.1_g000007 Rmu_sc0005996.1_g000027 Rmu_sc0009001.1_g000015 Rmu_sc0013727.1_g000001 Rmu_sc0016350.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343530
rosa_rugosa	Rorug04G0009400
rosa_samantha	Rh1AG207300 Rh2AG231000 Rh2AG449700 Rh2CG436600 Rh2DG238800 Rh3DG271300 Rh4AG087300 Rh4BG083900 Rh4CG095500 Rh4DG078800 Rh4DG124400 Rh5DG085200 Rh6BG230400
rosa_wichuraiana	Rw1G018260 Rw1G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	377
AatII	GACGTC	1 cut(s)	663
Acc36I	ACCTGC	1 cut(s)	1185
Acc65I	GGTACC	1 cut(s)	1072
AccB1I	GGYRCC	1 cut(s)	1072
AccBSI	CCGCTC	4 cut(s)	562, 733, 1225, 1382
AccI	GTMKAC	2 cut(s)	528, 579
AccII	CGCG	6 cut(s)	291, 339, 341, 702, 725, 1417
AccIII	TCCGGA	3 cut(s)	362, 786, 816
AclWI	GGATC	5 cut(s)	786, 926, 1005, 1414, 1427
AcvI	CACGTG	2 cut(s)	534, 1346
AcyI	GRCGYC	3 cut(s)	102, 543, 660
AdeI	CACNNNGTG	1 cut(s)	1346
AfaI	GTAC	2 cut(s)	1074, 1363
AfeI	AGCGCT	1 cut(s)	974
AfiI	CCNNNNNNNGG	7 cut(s)	116, 343, 574, 637, 706, 816, 1349
AflIII	ACRYGT	3 cut(s)	531, 1046, 1345
AhdI	GACNNNNNGTC	1 cut(s)	775
AjiI	CACGTC	3 cut(s)	517, 985, 1049
AjnI	CCWGG	2 cut(s)	809, 1310
AluBI	AGCT	2 cut(s)	1106, 1297
AluI	AGCT	2 cut(s)	1106, 1297
Alw21I	GWGCWC	1 cut(s)	915
Alw26I	GTCTC	3 cut(s)	709, 931, 1400
AlwI	GGATC	5 cut(s)	786, 926, 1005, 1414, 1427
Ama87I	CYCGRG	3 cut(s)	688, 706, 908
Aor13HI	TCCGGA	3 cut(s)	362, 786, 816
Aor51HI	AGCGCT	1 cut(s)	974
AoxI	GGCC	6 cut(s)	7, 203, 329, 709, 877, 1095
ApeKI	GCWGC	2 cut(s)	173, 294
ArsI	GACNNNNNNTTYG	2 cut(s)	98, 130
Asp718I	GGTACC	1 cut(s)	1072
AspLEI	GCGC	6 cut(s)	291, 341, 446, 975, 1083, 1248
AspS9I	GGNCC	7 cut(s)	204, 329, 375, 478, 709, 807, 1095
AsuC2I	CCSGG	9 cut(s)	328, 395, 419, 575, 584, 689, 690, 741, 904
AsuHPI	GGTGA	3 cut(s)	262, 448, 1003
AvaI	CYCGRG	3 cut(s)	688, 706, 908
AvaII	GGWCC	3 cut(s)	375, 478, 807
BaeGI	GKGCMC	1 cut(s)	1452
BamHI	GGATCC	1 cut(s)	1419
BanI	GGYRCC	1 cut(s)	1072
BanII	GRGCYC	1 cut(s)	471
BbrPI	CACGTG	2 cut(s)	534, 1346
BbsI	GAAGAC	2 cut(s)	295, 594
Bbv12I	GWGCWC	1 cut(s)	915
BbvI	GCAGC	2 cut(s)	185, 306
BccI	CCATC	1 cut(s)	1106
BceAI	ACGGC	7 cut(s)	167, 817, 892, 970, 976, 976, 1082
BciT130I	CCWGG	2 cut(s)	811, 1312
BclI	TGATCA	1 cut(s)	1023
BcnI	CCSGG	9 cut(s)	328, 395, 419, 575, 584, 689, 690, 741, 904
BcoDI	GTCTC	3 cut(s)	709, 931, 1400
BfaI	CTAG	1 cut(s)	1107
BfmI	CTRYAG	1 cut(s)	1401
BfoI	RGCGCY	2 cut(s)	976, 1249
BfuAI	ACCTGC	1 cut(s)	1185
BlpI	GCTNAGC	1 cut(s)	1190
Bme18I	GGWCC	3 cut(s)	375, 478, 807
BmeRI	GACNNNNNGTC	1 cut(s)	775
BmeT110I	CYCGRG	3 cut(s)	688, 706, 908
BmgBI	CACGTC	3 cut(s)	517, 985, 1049
BmgT120I	GGNCC	7 cut(s)	204, 329, 375, 478, 709, 807, 1095
BmiI	GGNNCC	8 cut(s)	316, 642, 745, 815, 990, 1074, 1096, 1421
BoxI	GACNNNNGTC	1 cut(s)	380
BpiI	GAAGAC	2 cut(s)	295, 594
BpmI	CTGGAG	1 cut(s)	997
Bpu10I	CCTNAGC	1 cut(s)	1298
Bpu1102I	GCTNAGC	1 cut(s)	1190
BpuEI	CTTGAG	2 cut(s)	11, 876
BpuMI	CCSGG	9 cut(s)	328, 395, 419, 575, 584, 689, 690, 741, 904
BsaAI	YACGTR	2 cut(s)	534, 1346
BsaHI	GRCGYC	3 cut(s)	102, 543, 660
BsaJI	CCNNGG	4 cut(s)	418, 471, 688, 1415
BsaWI	WCCGGW	5 cut(s)	362, 372, 402, 786, 816
Bsc4I	CCNNNNNNNGG	7 cut(s)	116, 343, 574, 637, 706, 816, 1349
Bse118I	RCCGGY	1 cut(s)	1275
Bse1I	ACTGG	1 cut(s)	1459
Bse3DI	GCAATG	1 cut(s)	123
BseAI	TCCGGA	3 cut(s)	362, 786, 816
BseBI	CCWGG	2 cut(s)	811, 1312
BseDI	CCNNGG	4 cut(s)	418, 471, 688, 1415
BseGI	GGATG	2 cut(s)	591, 1117
BseLI	CCNNNNNNNGG	7 cut(s)	116, 343, 574, 637, 706, 816, 1349
BseMI	GCAATG	1 cut(s)	123
BseMII	CTCAG	2 cut(s)	1181, 1312
BseNI	ACTGG	1 cut(s)	1459
BseSI	GKGCMC	1 cut(s)	1452
BseXI	GCAGC	2 cut(s)	185, 306
BseYI	CCCAGC	1 cut(s)	206
BsgI	GTGCAG	1 cut(s)	1147
Bsh1236I	CGCG	6 cut(s)	291, 339, 341, 702, 725, 1417
Bsh1285I	CGRYCG	3 cut(s)	373, 685, 862
BshFI	GGCC	6 cut(s)	9, 205, 331, 711, 879, 1097
BshNI	GGYRCC	1 cut(s)	1072
BsiEI	CGRYCG	3 cut(s)	373, 685, 862
BsiHKAI	GWGCWC	1 cut(s)	915
BsiHKCI	CYCGRG	3 cut(s)	688, 706, 908
BsiWI	CGTACG	1 cut(s)	1361
BslFI	GGGAC	3 cut(s)	373, 435, 849
BslI	CCNNNNNNNGG	7 cut(s)	116, 343, 574, 637, 706, 816, 1349
BsmAI	GTCTC	3 cut(s)	709, 931, 1400
BsmBI	CGTCTC	1 cut(s)	709
BsmFI	GGGAC	3 cut(s)	373, 435, 849
BsmI	GAATGC	2 cut(s)	446, 527
BsnI	GGCC	6 cut(s)	9, 205, 331, 711, 879, 1097
BsoBI	CYCGRG	3 cut(s)	688, 706, 908
Bsp1286I	GDGCHC	3 cut(s)	471, 915, 1452
Bsp13I	TCCGGA	3 cut(s)	362, 786, 816
Bsp143I	GATC	7 cut(s)	791, 918, 938, 997, 1023, 1357, 1419
Bsp1720I	GCTNAGC	1 cut(s)	1190
BspANI	GGCC	6 cut(s)	9, 205, 331, 711, 879, 1097
BspCNI	CTCAG	2 cut(s)	1182, 1311
BspEI	TCCGGA	3 cut(s)	362, 786, 816
BspFNI	CGCG	6 cut(s)	291, 339, 341, 702, 725, 1417
BspHI	TCATGA	2 cut(s)	766, 1026
BspLI	GGNNCC	8 cut(s)	316, 642, 745, 815, 990, 1074, 1096, 1421
BspMI	ACCTGC	1 cut(s)	1185
BspPI	GGATC	5 cut(s)	786, 926, 1005, 1414, 1427
BspT107I	GGYRCC	1 cut(s)	1072
BsrBI	CCGCTC	4 cut(s)	562, 733, 1225, 1382
BsrDI	GCAATG	1 cut(s)	123
BsrFI	RCCGGY	1 cut(s)	1275
BsrI	ACTGG	1 cut(s)	1459
BssAI	RCCGGY	1 cut(s)	1275
BssECI	CCNNGG	4 cut(s)	418, 471, 688, 1415
BssMI	GATC	7 cut(s)	791, 918, 938, 997, 1023, 1357, 1419
BssNI	GRCGYC	3 cut(s)	102, 543, 660
Bst2UI	CCWGG	2 cut(s)	811, 1312
Bst4CI	ACNGT	8 cut(s)	250, 379, 844, 863, 1077, 1142, 1375, 1447
BstACI	GRCGYC	3 cut(s)	102, 543, 660
BstBAI	YACGTR	2 cut(s)	534, 1346
BstC8I	GCNNGC	6 cut(s)	287, 503, 507, 560, 626, 1305
BstDEI	CTNAG	2 cut(s)	1190, 1298
BstDSI	CCRYGG	2 cut(s)	471, 1415
BstF5I	GGATG	2 cut(s)	591, 1117
BstFNI	CGCG	6 cut(s)	291, 339, 341, 702, 725, 1417
BstH2I	RGCGCY	2 cut(s)	976, 1249
BstHHI	GCGC	6 cut(s)	291, 341, 446, 975, 1083, 1248
BstKTI	GATC	7 cut(s)	794, 921, 941, 1000, 1026, 1360, 1422
BstMAI	GTCTC	3 cut(s)	709, 931, 1400
BstMBI	GATC	7 cut(s)	791, 918, 938, 997, 1023, 1357, 1419
BstMCI	CGRYCG	3 cut(s)	373, 685, 862
BstNI	CCWGG	2 cut(s)	811, 1312
BstPAI	GACNNNNGTC	1 cut(s)	380
BstSFI	CTRYAG	1 cut(s)	1401
BstSLI	GKGCMC	1 cut(s)	1452
BstUI	CGCG	6 cut(s)	291, 339, 341, 702, 725, 1417
BstV1I	GCAGC	2 cut(s)	185, 306
BstV2I	GAAGAC	2 cut(s)	295, 594
BstX2I	RGATCY	3 cut(s)	791, 997, 1419
BstXI	CCANNNNNNTGG	1 cut(s)	1318
BstYI	RGATCY	3 cut(s)	791, 997, 1419
BsuRI	GGCC	6 cut(s)	9, 205, 331, 711, 879, 1097
BtgI	CCRYGG	2 cut(s)	471, 1415
BtrI	CACGTC	3 cut(s)	517, 985, 1049
BtsCI	GGATG	2 cut(s)	591, 1117
BtsI	GCAGTG	4 cut(s)	280, 1135, 1141, 1237
BtsIMutI	CAGTG	7 cut(s)	280, 1135, 1141, 1147, 1237, 1371, 1452
BveI	ACCTGC	1 cut(s)	1185
Cac8I	GCNNGC	6 cut(s)	287, 503, 507, 560, 626, 1305
CciI	TCATGA	2 cut(s)	766, 1026
CfoI	GCGC	6 cut(s)	291, 341, 446, 975, 1083, 1248
Cfr10I	RCCGGY	1 cut(s)	1275
Cfr13I	GGNCC	7 cut(s)	204, 329, 375, 478, 709, 807, 1095
Cfr42I	CCGCGG	1 cut(s)	1418
Cfr9I	CCCGGG	1 cut(s)	688
CpoI	CGGWCCG	1 cut(s)	375
CseI	GACGC	5 cut(s)	110, 514, 551, 691, 1043
CsiI	ACCWGGT	1 cut(s)	809
Csp6I	GTAC	2 cut(s)	1073, 1362
CspCI	CAANNNNNGTGG	2 cut(s)	536, 571
CspI	CGGWCCG	1 cut(s)	375
CviAII	CATG	2 cut(s)	767, 1027
CviQI	GTAC	2 cut(s)	1073, 1362
DdeI	CTNAG	2 cut(s)	1190, 1298
DpnI	GATC	7 cut(s)	793, 920, 940, 999, 1025, 1359, 1421
DpnII	GATC	7 cut(s)	791, 918, 938, 997, 1023, 1357, 1419
DraIII	CACNNNGTG	1 cut(s)	1346
DrdI	GACNNNNNNGTC	1 cut(s)	377
DriI	GACNNNNNGTC	1 cut(s)	775
DseDI	GACNNNNNNGTC	1 cut(s)	377
Eam1105I	GACNNNNNGTC	1 cut(s)	775
EciI	GGCGGA	6 cut(s)	34, 141, 473, 686, 1401, 1416
Eco24I	GRGCYC	1 cut(s)	471
Eco47I	GGWCC	3 cut(s)	375, 478, 807
Eco47III	AGCGCT	1 cut(s)	974
Eco72I	CACGTG	2 cut(s)	534, 1346
Eco88I	CYCGRG	3 cut(s)	688, 706, 908
EcoO109I	RGGNCCY	1 cut(s)	478
EcoRII	CCWGG	2 cut(s)	809, 1310
EcoT38I	GRGCYC	1 cut(s)	471
Esp3I	CGTCTC	1 cut(s)	709
FaeI	CATG	2 cut(s)	770, 1030
FaiI	YATR	3 cut(s)	212, 768, 1028
FalI	AAGNNNNNCTT	2 cut(s)	494, 526
FaqI	GGGAC	3 cut(s)	373, 435, 849
FatI	CATG	2 cut(s)	766, 1026
FauI	CCCGC	2 cut(s)	344, 567
FbaI	TGATCA	1 cut(s)	1023
FblI	GTMKAC	2 cut(s)	528, 579
FokI	GGATG	2 cut(s)	578, 1124
FriOI	GRGCYC	1 cut(s)	471
FspBI	CTAG	1 cut(s)	1107
GlaI	GCGC	6 cut(s)	290, 340, 445, 974, 1082, 1247
GsaI	CCCAGC	1 cut(s)	210
GsuI	CTGGAG	1 cut(s)	997
HaeII	RGCGCY	2 cut(s)	976, 1249
HaeIII	GGCC	6 cut(s)	9, 205, 331, 711, 879, 1097
HgaI	GACGC	5 cut(s)	110, 514, 551, 691, 1043
HhaI	GCGC	6 cut(s)	291, 341, 446, 975, 1083, 1248
Hin1I	GRCGYC	3 cut(s)	102, 543, 660
Hin1II	CATG	2 cut(s)	770, 1030
Hin6I	GCGC	6 cut(s)	289, 339, 444, 973, 1081, 1246
HinP1I	GCGC	6 cut(s)	289, 339, 444, 973, 1081, 1246
HincII	GTYRAC	2 cut(s)	529, 580
HindII	GTYRAC	2 cut(s)	529, 580
HinfI	GANTC	5 cut(s)	366, 386, 462, 634, 1408
HphI	GGTGA	3 cut(s)	262, 448, 1003
Hpy166II	GTNNAC	3 cut(s)	246, 529, 580
Hpy188I	TCNGA	8 cut(s)	100, 227, 311, 848, 997, 1018, 1177, 1357
Hpy188III	TCNNGA	9 cut(s)	235, 363, 493, 767, 787, 817, 893, 1027, 1201
Hpy8I	GTNNAC	3 cut(s)	246, 529, 580
HpyAV	CCTTC	6 cut(s)	20, 65, 520, 805, 890, 1398
HpyCH4III	ACNGT	8 cut(s)	250, 379, 844, 863, 1077, 1142, 1375, 1447
HpyCH4IV	ACGT	7 cut(s)	516, 533, 660, 776, 984, 1048, 1345
HpyCH4V	TGCA	4 cut(s)	173, 285, 501, 1128
HpyF3I	CTNAG	2 cut(s)	1190, 1298
HpySE526I	ACGT	7 cut(s)	516, 533, 660, 776, 984, 1048, 1345
Hsp92I	GRCGYC	3 cut(s)	102, 543, 660
Hsp92II	CATG	2 cut(s)	770, 1030
HspAI	GCGC	6 cut(s)	289, 339, 444, 973, 1081, 1246
Kpn2I	TCCGGA	3 cut(s)	362, 786, 816
KpnI	GGTACC	1 cut(s)	1076
Ksp22I	TGATCA	1 cut(s)	1023
KspI	CCGCGG	1 cut(s)	1418
Kzo9I	GATC	7 cut(s)	791, 918, 938, 997, 1023, 1357, 1419
Lsp1109I	GCAGC	2 cut(s)	185, 306
MabI	ACCWGGT	1 cut(s)	809
MaeI	CTAG	1 cut(s)	1107
MaeII	ACGT	7 cut(s)	516, 533, 660, 776, 984, 1048, 1345
MaeIII	GTNAC	3 cut(s)	250, 1136, 1332
MalI	GATC	7 cut(s)	793, 920, 940, 999, 1025, 1359, 1421
MbiI	CCGCTC	4 cut(s)	562, 733, 1225, 1382
MboI	GATC	7 cut(s)	791, 918, 938, 997, 1023, 1357, 1419
MboII	GAAGA	6 cut(s)	50, 53, 295, 599, 992, 1383
MflI	RGATCY	3 cut(s)	791, 997, 1419
MhlI	GDGCHC	3 cut(s)	471, 915, 1452
MlyI	GAGTC	3 cut(s)	395, 628, 1402
MmeI	TCCRAC	4 cut(s)	123, 205, 975, 1155
MroI	TCCGGA	3 cut(s)	362, 786, 816
MseI	TTAA	1 cut(s)	168
MspA1I	CMGCKG	1 cut(s)	1417
Mva1269I	GAATGC	2 cut(s)	446, 527
MvaI	CCWGG	2 cut(s)	811, 1312
MvnI	CGCG	6 cut(s)	291, 339, 341, 702, 725, 1417
NciI	CCSGG	9 cut(s)	328, 395, 419, 575, 584, 689, 690, 741, 904
NdeII	GATC	7 cut(s)	791, 918, 938, 997, 1023, 1357, 1419
NlaIII	CATG	2 cut(s)	770, 1030
NlaIV	GGNNCC	8 cut(s)	316, 642, 745, 815, 990, 1074, 1096, 1421
NmuCI	GTSAC	3 cut(s)	250, 1136, 1332
PaeR7I	CTCGAG	1 cut(s)	908
PagI	TCATGA	2 cut(s)	766, 1026
PcsI	WCGNNNNNNNCGW	7 cut(s)	108, 375, 513, 522, 525, 666, 1342
PctI	GAATGC	2 cut(s)	446, 527
PfeI	GAWTC	2 cut(s)	366, 462
Pfl23II	CGTACG	1 cut(s)	1361
PflFI	GACNNNGTC	1 cut(s)	662
PleI	GAGTC	3 cut(s)	394, 628, 1402
PmaCI	CACGTG	2 cut(s)	534, 1346
PmlI	CACGTG	2 cut(s)	534, 1346
PpsI	GAGTC	3 cut(s)	394, 628, 1402
Ppu21I	YACGTR	2 cut(s)	534, 1346
PpuMI	RGGWCCY	1 cut(s)	478
PshAI	GACNNNNGTC	1 cut(s)	380
Psp5II	RGGWCCY	1 cut(s)	478
Psp6I	CCWGG	2 cut(s)	809, 1310
PspCI	CACGTG	2 cut(s)	534, 1346
PspFI	CCCAGC	1 cut(s)	206
PspGI	CCWGG	2 cut(s)	809, 1310
PspLI	CGTACG	1 cut(s)	1361
PspN4I	GGNNCC	8 cut(s)	316, 642, 745, 815, 990, 1074, 1096, 1421
PspPI	GGNCC	7 cut(s)	204, 329, 375, 478, 709, 807, 1095
PspPPI	RGGWCCY	1 cut(s)	478
PspXI	VCTCGAGB	1 cut(s)	908
PsuI	RGATCY	3 cut(s)	791, 997, 1419
PsyI	GACNNNGTC	1 cut(s)	662
RsaI	GTAC	2 cut(s)	1074, 1363
RsaNI	GTAC	2 cut(s)	1073, 1362
Rsr2I	CGGWCCG	1 cut(s)	375
RsrII	CGGWCCG	1 cut(s)	375
SacII	CCGCGG	1 cut(s)	1418
SalI	GTCGAC	2 cut(s)	527, 578
SaqAI	TTAA	1 cut(s)	168
Sau3AI	GATC	7 cut(s)	791, 918, 938, 997, 1023, 1357, 1419
Sau96I	GGNCC	7 cut(s)	204, 329, 375, 478, 709, 807, 1095
SchI	GAGTC	3 cut(s)	395, 628, 1402
SduI	GDGCHC	3 cut(s)	471, 915, 1452
SexAI	ACCWGGT	1 cut(s)	809
SfcI	CTRYAG	1 cut(s)	1401
Sfr274I	CTCGAG	1 cut(s)	908
Sfr303I	CCGCGG	1 cut(s)	1418
SgrBI	CCGCGG	1 cut(s)	1418
SinI	GGWCC	3 cut(s)	375, 478, 807
SlaI	CTCGAG	1 cut(s)	908
SmaI	CCCGGG	1 cut(s)	690
SmlI	CTYRAG	3 cut(s)	26, 891, 908
SmoI	CTYRAG	3 cut(s)	26, 891, 908
SspMI	CTAG	1 cut(s)	1107
TaaI	ACNGT	8 cut(s)	250, 379, 844, 863, 1077, 1142, 1375, 1447
TaiI	ACGT	7 cut(s)	519, 536, 663, 779, 987, 1051, 1348
TfiI	GAWTC	2 cut(s)	366, 462
Tru1I	TTAA	1 cut(s)	168
Tru9I	TTAA	1 cut(s)	168
TscAI	CASTG	7 cut(s)	287, 1135, 1141, 1147, 1237, 1378, 1459
TseFI	GTSAC	3 cut(s)	250, 1136, 1332
TseI	GCWGC	2 cut(s)	173, 294
Tsp45I	GTSAC	3 cut(s)	250, 1136, 1332
TspDTI	ATGAA	1 cut(s)	295
TspGWI	ACGGA	2 cut(s)	488, 1053
TspMI	CCCGGG	1 cut(s)	688
TspRI	CASTG	7 cut(s)	287, 1135, 1141, 1147, 1237, 1378, 1459
Tth111I	GACNNNGTC	1 cut(s)	662
VpaK11BI	GGWCC	3 cut(s)	375, 478, 807
XhoI	CTCGAG	1 cut(s)	908
XmaI	CCCGGG	1 cut(s)	688
XmiI	GTMKAC	2 cut(s)	528, 579
XspI	CTAG	1 cut(s)	1107
ZraI	GACGTC	1 cut(s)	661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.