Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0002352

Physical Location & Seq

Genomic Coordinates Reverse (-)

11704958 .. 11707994

Gene Structure 3037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG078800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGGGCTGCCTTCTCTTTCTCTCTCTCAAGCCCACCACCACCACCGCCGCCGCCGCCTTCTTTGTTCTTCTAATCACCCTCCTCTCTTTTCTCTCTACACCCTCCAATGCCGACCCCGACCCCGACCCGAAAATCGGCGACATTGCCACAACGTCTGCTTCACCGCCGCCACCTGTACTTAATGTGGACACCGCCGAGAAACCCAAGTCGTTCCGGCCCAGCATGGCCATCATGGTCGGAGTTCTGACGACTCTGTTCTCCTTCACGTTTCTTCTCCTCCTCTACGCCAAGCACTGCAAGCGCGGCAGCTTCGTCGTCATCGGAGGAACCGCCGCCGAATCCGGACCTCCCGGCGGGGCGGGTCTCCGTAAAAACTCCGGAATCGACCGGGCCGTCGTCGAGTCCCTCCCGGTATTCCGGTTCAGGTCGCTCCGGGGACACAAGGACGGCCTCGAATGCGCCGTCTGCCTCACCCGGTTCGAGCCCACCGAGGTCCTCCGCCTCCTCCCGAAATGCAAGCACGCCTTCCACGTCGAGTGCGTCGACACGTGGCTCGACGCCCACTCCACCTGCCCGCTCTGCCGCTACCGGGTCGACCCGGAAGACATCCTCCTAATCGAAGACGCCAGAATCCTGCACCACCAGAACAGCCAGCCCCAGACTCCCCACCAAAACGACGTCGTCATCAACATCGAAACCGACCCGGGAATCCGCCGCGTGTCGGGGCGCCACTCCTCCGCCTTGGAGCAGCGACCCGGCTCCTCCTCTCACGACAATACGTCGTCGTTCCGGAGGTCCCTCGACAGCTGGACCTGGTTCCGGAAAAAAACCGAACCCGCGGCCGCCGCCGGAAGCCAAGAACGTCCGAGAAAAGACGGCCTCCTTTTAAGCCACGACAAAACGAGGCTGGAGCACCGAATCATCGTCTCCTCCCCCAGATCAAGCAACACCGGCGGCGGTGGGTTCCACCAACGATGGAGCGACGTACAGCCGTCCGATCTTCTCTACCTTCGCTCGGAGATGATCATAAGCGATAACGGACTGACACGTCAGGGGCAGGACCAGGAGGAGGTACCGTTGCGCTGTGGCAATGGGGCCGTTCCAGCTGGGGAGAGTAATGGAGGGAGTGGGAGTGGGAGTGGCAGTGGCAGAGGCGTAATAAACGAGCGAAGCGTGTCGGAAATCACGGGGTTGAGCAGGTTTTCGAACAGAGGGAGCAGTAATGAGAGGAGCAATCAGCACCACCAAAACCATCAGCAGCGTTACCAACAGCGACAGCTCAGGCTCGTATCCAGGTGGGTCGCTTGGATTTCGTCCCAGTCACGCCCAGCTGTACGGCCTGATCGTACCACTGGTGCTTCTTCCCCCACCACTCCACAGACTACACCACCACCACCGCCTTTACCCACTGTGGCCACTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

474

Amino Acids

51.7

Weight (kDa)

9.29

Isoelectric Point (pI)

54.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	152 - 195	2e-13	Ring finger domain
zf-RING_11	PF17123	152 - 181	1.1e-09	RING-like zinc finger
zf-C3HC4_2	PF13923	152 - 194	4.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	153 - 194	2.3e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	165 - 195	5.5e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05810
fragaria_vesca	FvH4_4g06660
malus_domestica	MD13G1236900.v1.1 MD16G1242200.v1.1
prunus_persica	Prupe.1G069300_v2.0.a1
pyrus_communis	pycom13g20980 pycom16g20300
rosa_chinensis	RchiOBHm_Chr3g0495141 RchiOBHm_Chr4g0398561
rosa_laevigata	RLG00000009344 RLG00000026064 RLG00000029692 RLG00000030599 RLG00000032695 RLG00000032696
rosa_multiflora	Rmu_co8139468.1_g000001 Rmu_co8270033.1_g000001 Rmu_co8275827.1_g000001 Rmu_sc0000185.1_g000029 Rmu_sc0000990.1_g000016 Rmu_sc0005217.1_g000007 Rmu_sc0005996.1_g000027 Rmu_sc0009001.1_g000015 Rmu_sc0013727.1_g000001 Rmu_sc0016350.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343530
rosa_rugosa	Rorug04G0009400
rosa_samantha	Rh1AG207300 Rh2AG231000 Rh2AG449700 Rh2CG436600 Rh2DG238800 Rh3DG271300 Rh4AG087300 Rh4BG083900 Rh4CG095500 Rh4DG078800 Rh4DG124400 Rh5DG085200 Rh6BG230400
rosa_wichuraiana	Rw1G018260 Rw1G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	578
AasI	GACNNNNNNGTC	2 cut(s)	392, 1047
AatII	GACGTC	1 cut(s)	681
Acc36I	ACCTGC	2 cut(s)	578, 1188
Acc65I	GGTACC	1 cut(s)	1072
AccB1I	GGYRCC	2 cut(s)	726, 1072
AccBSI	CCGCTC	1 cut(s)	577
AccI	GTMKAC	2 cut(s)	543, 594
AccII	CGCG	3 cut(s)	303, 717, 839
AccIII	TCCGGA	4 cut(s)	341, 377, 789, 819
AcoI	YGGCCR	3 cut(s)	225, 840, 1413
AcvI	CACGTG	1 cut(s)	549
AcyI	GRCGYC	4 cut(s)	558, 624, 678, 727
AfaI	GTAC	5 cut(s)	177, 987, 1074, 1335, 1348
AfiI	CCNNNNNNNGG	7 cut(s)	134, 353, 589, 721, 819, 1015, 1069
AflIII	ACRYGT	2 cut(s)	546, 1046
AhdI	GACNNNNNGTC	1 cut(s)	778
AjiI	CACGTC	2 cut(s)	532, 1049
AjnI	CCWGG	3 cut(s)	812, 1062, 1292
AluBI	AGCT	5 cut(s)	309, 807, 1106, 1279, 1331
AluI	AGCT	5 cut(s)	309, 807, 1106, 1279, 1331
Alw21I	GWGCWC	1 cut(s)	915
Alw26I	GTCTC	2 cut(s)	368, 931
Ama87I	CYCGRG	1 cut(s)	703
Aor13HI	TCCGGA	4 cut(s)	341, 377, 789, 819
AoxI	GGCC	9 cut(s)	215, 225, 390, 448, 840, 877, 1095, 1337, 1413
ApeKI	GCWGC	4 cut(s)	6, 306, 748, 1258
ArsI	GACNNNNNNTTYG	2 cut(s)	447, 479
Asp718I	GGTACC	1 cut(s)	1072
AspLEI	GCGC	4 cut(s)	303, 461, 729, 1083
AspS9I	GGNCC	8 cut(s)	216, 344, 390, 493, 795, 810, 1060, 1095
AsuHPI	GGTGA	3 cut(s)	67, 153, 463
AsuII	TTCGAA	1 cut(s)	1205
AvaI	CYCGRG	1 cut(s)	703
AvaII	GGWCC	5 cut(s)	344, 493, 795, 810, 1060
BalI	TGGCCA	2 cut(s)	227, 1415
BanI	GGYRCC	2 cut(s)	726, 1072
BanII	GRGCYC	1 cut(s)	486
BbrPI	CACGTG	1 cut(s)	549
BbsI	GAAGAC	2 cut(s)	609, 627
Bbv12I	GWGCWC	1 cut(s)	915
BbvI	GCAGC	3 cut(s)	318, 760, 1270
BccI	CCATC	3 cut(s)	236, 969, 1260
BceAI	ACGGC	7 cut(s)	377, 446, 463, 892, 976, 1082, 1352
BcgI	CGANNNNNNTGC	2 cut(s)	295, 329
BciT130I	CCWGG	3 cut(s)	814, 1064, 1294
BciVI	GTATCC	1 cut(s)	1300
BclI	TGATCA	1 cut(s)	1023
BcoDI	GTCTC	2 cut(s)	368, 931
BfoI	RGCGCY	1 cut(s)	730
BfuAI	ACCTGC	2 cut(s)	578, 1188
BfuI	GTATCC	1 cut(s)	1300
Bme18I	GGWCC	5 cut(s)	344, 493, 795, 810, 1060
BmeRI	GACNNNNNGTC	1 cut(s)	778
BmeT110I	CYCGRG	1 cut(s)	703
BmgBI	CACGTC	2 cut(s)	532, 1049
BmgT120I	GGNCC	8 cut(s)	216, 344, 390, 493, 795, 810, 1060, 1095
BmiI	GGNNCC	8 cut(s)	328, 728, 760, 797, 818, 965, 1074, 1096
BmrI	ACTGGG	1 cut(s)	1312
BmuI	ACTGGG	1 cut(s)	1312
BpiI	GAAGAC	2 cut(s)	609, 627
BpmI	CTGGAG	1 cut(s)	929
Bpu10I	CCTNAGC	1 cut(s)	1280
Bpu14I	TTCGAA	1 cut(s)	1205
BpuEI	CTTGAG	1 cut(s)	11
BsaAI	YACGTR	1 cut(s)	549
BsaHI	GRCGYC	4 cut(s)	558, 624, 678, 727
BsaI	GGTCTC	1 cut(s)	368
BsaJI	CCNNGG	5 cut(s)	433, 489, 703, 741, 837
BsaWI	WCCGGW	5 cut(s)	341, 377, 417, 789, 819
Bsc4I	CCNNNNNNNGG	7 cut(s)	134, 353, 589, 721, 819, 1015, 1069
Bse118I	RCCGGY	1 cut(s)	950
Bse1I	ACTGG	2 cut(s)	1318, 1357
Bse3DI	GCAATG	2 cut(s)	141, 1096
BseAI	TCCGGA	4 cut(s)	341, 377, 789, 819
BseBI	CCWGG	3 cut(s)	814, 1064, 1294
BseDI	CCNNGG	5 cut(s)	433, 489, 703, 741, 837
BseGI	GGATG	1 cut(s)	606
BseLI	CCNNNNNNNGG	7 cut(s)	134, 353, 589, 721, 819, 1015, 1069
BseMI	GCAATG	2 cut(s)	141, 1096
BseMII	CTCAG	1 cut(s)	1294
BseNI	ACTGG	2 cut(s)	1318, 1357
BseX3I	CGGCCG	1 cut(s)	840
BseXI	GCAGC	3 cut(s)	318, 760, 1270
BseYI	CCCAGC	3 cut(s)	218, 1106, 1327
BsgI	GTGCAG	1 cut(s)	620
Bsh1236I	CGCG	3 cut(s)	303, 717, 839
Bsh1285I	CGRYCG	2 cut(s)	388, 843
BshFI	GGCC	9 cut(s)	217, 227, 392, 450, 842, 879, 1097, 1339, 1415
BshNI	GGYRCC	2 cut(s)	726, 1072
BsiEI	CGRYCG	2 cut(s)	388, 843
BsiHKAI	GWGCWC	1 cut(s)	915
BsiHKCI	CYCGRG	1 cut(s)	703
BslFI	GGGAC	4 cut(s)	388, 450, 781, 1300
BslI	CCNNNNNNNGG	7 cut(s)	134, 353, 589, 721, 819, 1015, 1069
BsmAI	GTCTC	2 cut(s)	368, 931
BsmBI	CGTCTC	1 cut(s)	931
BsmFI	GGGAC	4 cut(s)	388, 450, 781, 1300
BsmI	GAATGC	1 cut(s)	461
BsnI	GGCC	9 cut(s)	217, 227, 392, 450, 842, 879, 1097, 1339, 1415
Bso31I	GGTCTC	1 cut(s)	368
BsoBI	CYCGRG	1 cut(s)	703
Bsp119I	TTCGAA	1 cut(s)	1205
Bsp1286I	GDGCHC	2 cut(s)	486, 915
Bsp13I	TCCGGA	4 cut(s)	341, 377, 789, 819
Bsp143I	GATC	4 cut(s)	938, 997, 1023, 1342
BspANI	GGCC	9 cut(s)	217, 227, 392, 450, 842, 879, 1097, 1339, 1415
BspCNI	CTCAG	1 cut(s)	1293
BspEI	TCCGGA	4 cut(s)	341, 377, 789, 819
BspFNI	CGCG	3 cut(s)	303, 717, 839
BspLI	GGNNCC	8 cut(s)	328, 728, 760, 797, 818, 965, 1074, 1096
BspMI	ACCTGC	2 cut(s)	578, 1188
BspT104I	TTCGAA	1 cut(s)	1205
BspT107I	GGYRCC	2 cut(s)	726, 1072
BspTNI	GGTCTC	1 cut(s)	368
BsrBI	CCGCTC	1 cut(s)	577
BsrDI	GCAATG	2 cut(s)	141, 1096
BsrFI	RCCGGY	1 cut(s)	950
BsrI	ACTGG	2 cut(s)	1318, 1357
BssAI	RCCGGY	1 cut(s)	950
BssECI	CCNNGG	5 cut(s)	433, 489, 703, 741, 837
BssMI	GATC	4 cut(s)	938, 997, 1023, 1342
BssNI	GRCGYC	4 cut(s)	558, 624, 678, 727
BssT1I	CCWWGG	1 cut(s)	741
Bst2UI	CCWGG	3 cut(s)	814, 1064, 1294
Bst4CI	ACNGT	2 cut(s)	1077, 1411
BstACI	GRCGYC	4 cut(s)	558, 624, 678, 727
BstBAI	YACGTR	1 cut(s)	549
BstBI	TTCGAA	1 cut(s)	1205
BstC8I	GCNNGC	5 cut(s)	299, 518, 522, 575, 653
BstDEI	CTNAG	1 cut(s)	1280
BstDSI	CCRYGG	1 cut(s)	837
BstF5I	GGATG	1 cut(s)	606
BstFNI	CGCG	3 cut(s)	303, 717, 839
BstH2I	RGCGCY	1 cut(s)	730
BstHHI	GCGC	4 cut(s)	303, 461, 729, 1083
BstKTI	GATC	4 cut(s)	941, 1000, 1026, 1345
BstMAI	GTCTC	2 cut(s)	368, 931
BstMBI	GATC	4 cut(s)	938, 997, 1023, 1342
BstMCI	CGRYCG	2 cut(s)	388, 843
BstMWI	GCNNNNNNNGC	9 cut(s)	53, 298, 303, 456, 465, 579, 845, 951, 1103
BstNI	CCWGG	3 cut(s)	814, 1064, 1294
BstUI	CGCG	3 cut(s)	303, 717, 839
BstV1I	GCAGC	3 cut(s)	318, 760, 1270
BstV2I	GAAGAC	2 cut(s)	609, 627
BstZI	CGGCCG	1 cut(s)	840
BsuI	GTATCC	1 cut(s)	1300
BsuRI	GGCC	9 cut(s)	217, 227, 392, 450, 842, 879, 1097, 1339, 1415
BtgI	CCRYGG	1 cut(s)	837
BtrI	CACGTC	2 cut(s)	532, 1049
BtsCI	GGATG	1 cut(s)	606
BtsI	GCAGTG	3 cut(s)	292, 1150, 1416
BtsIMutI	CAGTG	5 cut(s)	292, 1150, 1350, 1407, 1416
BveI	ACCTGC	2 cut(s)	578, 1188
Cac8I	GCNNGC	5 cut(s)	299, 518, 522, 575, 653
CciNI	GCGGCCGC	1 cut(s)	840
CfoI	GCGC	4 cut(s)	303, 461, 729, 1083
Cfr10I	RCCGGY	1 cut(s)	950
Cfr13I	GGNCC	8 cut(s)	216, 344, 390, 493, 795, 810, 1060, 1095
Cfr42I	CCGCGG	1 cut(s)	840
Cfr9I	CCCGGG	1 cut(s)	703
CseI	GACGC	3 cut(s)	529, 566, 632
CsiI	ACCWGGT	1 cut(s)	812
Csp6I	GTAC	5 cut(s)	176, 986, 1073, 1334, 1347
CviAII	CATG	2 cut(s)	223, 232
CviQI	GTAC	5 cut(s)	176, 986, 1073, 1334, 1347
DdeI	CTNAG	1 cut(s)	1280
DinI	GGCGCC	1 cut(s)	728
DpnI	GATC	4 cut(s)	940, 999, 1025, 1344
DpnII	GATC	4 cut(s)	938, 997, 1023, 1342
DrdI	GACNNNNNNGTC	2 cut(s)	392, 1047
DriI	GACNNNNNGTC	1 cut(s)	778
DseDI	GACNNNNNNGTC	2 cut(s)	392, 1047
EaeI	YGGCCR	3 cut(s)	225, 840, 1413
EagI	CGGCCG	1 cut(s)	840
Eam1105I	GACNNNNNGTC	1 cut(s)	778
EciI	GGCGGA	3 cut(s)	488, 701, 727
EclXI	CGGCCG	1 cut(s)	840
Eco130I	CCWWGG	1 cut(s)	741
Eco24I	GRGCYC	1 cut(s)	486
Eco31I	GGTCTC	1 cut(s)	368
Eco47I	GGWCC	5 cut(s)	344, 493, 795, 810, 1060
Eco52I	CGGCCG	1 cut(s)	840
Eco72I	CACGTG	1 cut(s)	549
Eco88I	CYCGRG	1 cut(s)	703
EcoO109I	RGGNCCY	2 cut(s)	493, 795
EcoRII	CCWGG	3 cut(s)	812, 1062, 1292
EcoT14I	CCWWGG	1 cut(s)	741
EcoT38I	GRGCYC	1 cut(s)	486
EgeI	GGCGCC	1 cut(s)	728
EheI	GGCGCC	1 cut(s)	728
ErhI	CCWWGG	1 cut(s)	741
Esp3I	CGTCTC	1 cut(s)	931
FaeI	CATG	2 cut(s)	226, 235
FaiI	YATR	3 cut(s)	224, 233, 1028
FalI	AAGNNNNNCTT	2 cut(s)	509, 541
FaqI	GGGAC	4 cut(s)	388, 450, 781, 1300
FatI	CATG	2 cut(s)	222, 231
FauI	CCCGC	4 cut(s)	347, 352, 582, 844
FbaI	TGATCA	1 cut(s)	1023
FblI	GTMKAC	2 cut(s)	543, 594
FokI	GGATG	1 cut(s)	593
FriOI	GRGCYC	1 cut(s)	486
GlaI	GCGC	4 cut(s)	302, 460, 728, 1082
GsaI	CCCAGC	3 cut(s)	222, 1110, 1331
GsuI	CTGGAG	1 cut(s)	929
HaeII	RGCGCY	1 cut(s)	730
HaeIII	GGCC	9 cut(s)	217, 227, 392, 450, 842, 879, 1097, 1339, 1415
HgaI	GACGC	3 cut(s)	529, 566, 632
HhaI	GCGC	4 cut(s)	303, 461, 729, 1083
Hin1I	GRCGYC	4 cut(s)	558, 624, 678, 727
Hin1II	CATG	2 cut(s)	226, 235
Hin6I	GCGC	4 cut(s)	301, 459, 727, 1081
HinP1I	GCGC	4 cut(s)	301, 459, 727, 1081
HincII	GTYRAC	2 cut(s)	544, 595
HindII	GTYRAC	2 cut(s)	544, 595
HinfI	GANTC	8 cut(s)	250, 338, 381, 401, 630, 661, 708, 918
HphI	GGTGA	3 cut(s)	67, 153, 463
Hpy166II	GTNNAC	3 cut(s)	187, 544, 595
Hpy188I	TCNGA	7 cut(s)	239, 246, 323, 867, 997, 1018, 1180
Hpy188III	TCNNGA	6 cut(s)	342, 378, 508, 770, 790, 820
Hpy8I	GTNNAC	3 cut(s)	187, 544, 595
HpyAV	CCTTC	5 cut(s)	20, 67, 271, 535, 1019
HpyCH4III	ACNGT	2 cut(s)	1077, 1411
HpyCH4IV	ACGT	9 cut(s)	152, 266, 531, 548, 678, 779, 862, 984, 1048
HpyCH4V	TGCA	3 cut(s)	297, 516, 637
HpyF10VI	GCNNNNNNNGC	9 cut(s)	53, 298, 303, 456, 465, 579, 845, 951, 1103
HpyF3I	CTNAG	1 cut(s)	1280
HpySE526I	ACGT	9 cut(s)	152, 266, 531, 548, 678, 779, 862, 984, 1048
Hsp92I	GRCGYC	4 cut(s)	558, 624, 678, 727
Hsp92II	CATG	2 cut(s)	226, 235
HspAI	GCGC	4 cut(s)	301, 459, 727, 1081
KasI	GGCGCC	1 cut(s)	726
Kpn2I	TCCGGA	4 cut(s)	341, 377, 789, 819
KpnI	GGTACC	1 cut(s)	1076
Ksp22I	TGATCA	1 cut(s)	1023
KspI	CCGCGG	1 cut(s)	840
Kzo9I	GATC	4 cut(s)	938, 997, 1023, 1342
LmnI	GCTCC	7 cut(s)	435, 745, 764, 910, 978, 1215, 1230
Lsp1109I	GCAGC	3 cut(s)	318, 760, 1270
MabI	ACCWGGT	1 cut(s)	812
MaeII	ACGT	9 cut(s)	152, 266, 531, 548, 678, 779, 862, 984, 1048
MaeIII	GTNAC	2 cut(s)	1262, 1320
MalI	GATC	4 cut(s)	940, 999, 1025, 1344
MbiI	CCGCTC	1 cut(s)	577
MboI	GATC	4 cut(s)	938, 997, 1023, 1342
MboII	GAAGA	6 cut(s)	59, 263, 614, 632, 992, 1353
MhlI	GDGCHC	2 cut(s)	486, 915
MlsI	TGGCCA	2 cut(s)	227, 1415
MluNI	TGGCCA	2 cut(s)	227, 1415
Mly113I	GGCGCC	1 cut(s)	727
MlyI	GAGTC	3 cut(s)	244, 410, 655
MmeI	TCCRAC	2 cut(s)	217, 1158
Mox20I	TGGCCA	2 cut(s)	227, 1415
MroI	TCCGGA	4 cut(s)	341, 377, 789, 819
MscI	TGGCCA	2 cut(s)	227, 1415
MseI	TTAA	2 cut(s)	180, 887
Msp20I	TGGCCA	2 cut(s)	227, 1415
MspA1I	CMGCKG	4 cut(s)	807, 839, 1106, 1331
Mva1269I	GAATGC	1 cut(s)	461
MvaI	CCWGG	3 cut(s)	814, 1064, 1294
MvnI	CGCG	3 cut(s)	303, 717, 839
MwoI	GCNNNNNNNGC	9 cut(s)	53, 298, 303, 456, 465, 579, 845, 951, 1103
NarI	GGCGCC	1 cut(s)	727
NdeII	GATC	4 cut(s)	938, 997, 1023, 1342
NlaIII	CATG	2 cut(s)	226, 235
NlaIV	GGNNCC	8 cut(s)	328, 728, 760, 797, 818, 965, 1074, 1096
NmeAIII	GCCGAG	1 cut(s)	220
NmuCI	GTSAC	1 cut(s)	1320
NotI	GCGGCCGC	1 cut(s)	840
NspV	TTCGAA	1 cut(s)	1205
PaqCI	CACCTGC	1 cut(s)	578
PcsI	WCGNNNNNNNCGW	8 cut(s)	390, 459, 486, 528, 537, 540, 1170, 1342
PctI	GAATGC	1 cut(s)	461
PfeI	GAWTC	5 cut(s)	338, 381, 630, 708, 918
PflFI	GACNNNGTC	1 cut(s)	680
PleI	GAGTC	3 cut(s)	244, 409, 655
PluTI	GGCGCC	1 cut(s)	730
PmaCI	CACGTG	1 cut(s)	549
PmlI	CACGTG	1 cut(s)	549
PpsI	GAGTC	3 cut(s)	244, 409, 655
Ppu21I	YACGTR	1 cut(s)	549
PpuMI	RGGWCCY	2 cut(s)	493, 795
Psp5II	RGGWCCY	2 cut(s)	493, 795
Psp6I	CCWGG	3 cut(s)	812, 1062, 1292
PspCI	CACGTG	1 cut(s)	549
PspFI	CCCAGC	3 cut(s)	218, 1106, 1327
PspGI	CCWGG	3 cut(s)	812, 1062, 1292
PspN4I	GGNNCC	8 cut(s)	328, 728, 760, 797, 818, 965, 1074, 1096
PspPI	GGNCC	8 cut(s)	216, 344, 390, 493, 795, 810, 1060, 1095
PspPPI	RGGWCCY	2 cut(s)	493, 795
PsyI	GACNNNGTC	1 cut(s)	680
PvuII	CAGCTG	3 cut(s)	807, 1106, 1331
RsaI	GTAC	5 cut(s)	177, 987, 1074, 1335, 1348
RsaNI	GTAC	5 cut(s)	176, 986, 1073, 1334, 1347
SacII	CCGCGG	1 cut(s)	840
SalI	GTCGAC	2 cut(s)	542, 593
SaqAI	TTAA	2 cut(s)	180, 887
Sau3AI	GATC	4 cut(s)	938, 997, 1023, 1342
Sau96I	GGNCC	8 cut(s)	216, 344, 390, 493, 795, 810, 1060, 1095
SchI	GAGTC	3 cut(s)	244, 410, 655
SduI	GDGCHC	2 cut(s)	486, 915
SexAI	ACCWGGT	1 cut(s)	812
SfoI	GGCGCC	1 cut(s)	728
Sfr303I	CCGCGG	1 cut(s)	840
SfuI	TTCGAA	1 cut(s)	1205
SgrAI	CRCCGGYG	1 cut(s)	950
SgrBI	CCGCGG	1 cut(s)	840
SinI	GGWCC	5 cut(s)	344, 493, 795, 810, 1060
SmaI	CCCGGG	1 cut(s)	705
SmlI	CTYRAG	1 cut(s)	26
SmoI	CTYRAG	1 cut(s)	26
SspDI	GGCGCC	1 cut(s)	726
StyI	CCWWGG	1 cut(s)	741
TaaI	ACNGT	2 cut(s)	1077, 1411
TaiI	ACGT	9 cut(s)	155, 269, 534, 551, 681, 782, 865, 987, 1051
TatI	WGTACW	1 cut(s)	175
TfiI	GAWTC	5 cut(s)	338, 381, 630, 708, 918
Tru1I	TTAA	2 cut(s)	180, 887
Tru9I	TTAA	2 cut(s)	180, 887
TscAI	CASTG	5 cut(s)	299, 1150, 1357, 1414, 1423
TseFI	GTSAC	1 cut(s)	1320
TseI	GCWGC	4 cut(s)	6, 306, 748, 1258
Tsp45I	GTSAC	1 cut(s)	1320
TspGWI	ACGGA	2 cut(s)	356, 1053
TspMI	CCCGGG	1 cut(s)	703
TspRI	CASTG	5 cut(s)	299, 1150, 1357, 1414, 1423
Tth111I	GACNNNGTC	1 cut(s)	680
VpaK11BI	GGWCC	5 cut(s)	344, 493, 795, 810, 1060
XmaI	CCCGGG	1 cut(s)	703
XmiI	GTMKAC	2 cut(s)	543, 594
ZraI	GACGTC	1 cut(s)	679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.