Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0002352

Physical Location & Seq

Genomic Coordinates Reverse (-)

14538895 .. 14540715

Gene Structure 1821 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG083900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGGCTGCCTTCTCTTTCTCTCTCTCAAGCCCACCACCACCGTCGCCGCCGCCTTCTTCGTTCTTCTAATCACCCTCCTCTCTTTTCTCTCTACACCCTCCAATGCCGACCCCGACCCCGACCCCGACCCGAAAATCGGCGACATTGCCACAACGTCTGCTTCACCGCCGCCACCTGTACTTAATGTGGACACCGCCGAGAAACCCAAGTCGTTCCGGCCCAGCATGGCCATCATGGTCGGAGTTCTGACGACTCTGTTCTCCTTCACGTTTCTTCTCCTCCTCTATGCCAAGCACTGCAAGCGCGGCAGCTTCGTCGTCATCGGAGGAACCGCCGACTTCGGACATCCCGGCGGGGCGGGTCTCCGTAAAAACTCCGGAATCGACCGGGCCGTCATCGACTCCCTCCCGGTTTTCCGGTTCAGGTCGCTCCGGGGACACAAGGACGGCCTCGAATGCGCCGTCTGCCTCACCCGATTCGAGCCCACCGAGGTCCTCCGCCTCCTCCCGAAATGCAAGCACGCCTTCCACGTCGAGTGCGTCGACACGTGGCTCGACGCCCACTCCACCTGCCCGCTCTGCCGCCACCGGGTCGACCCGGAAGACATCCTCCTAATCGAAGACGCCAGAATCCTGCACCACCAGAACAGCCAGCCCCAGACTCCCCACCAAAACGACGTCGTCATCAACATCGAAACCGACCCGGGAATCCGCCGCGTCTCGGGGCGCCACTCCTCCGCCTTGGAGCAGCGACCCGGCTCCTCCTCTCACGACAATACGTCGTCGTTCCGGAGGTCCCTGGACAGCTGGACCTGGTTCCGGAAAAAAACCGAACCCGCCACCGCCGCCGCCGGAAGCCAAGAACGTCCGAGAAAAGACGGCCTTCTCTTAAGCCACGACAAAACGAGGCTGGAGCACCGAATCATCGTCTCCTCCCCCAGATCAAGCAACACCGGCGGCGGTGGGTTCCACCAACGATGGAGCGACGTACAGCCGTCCGATCTGCTCTACCTTCGCTCCGAGATGATCATAAGCGATAACGGACTGACACGTCAGGAGCAGGAGCTACCGTTGCGCTGTGGCACTGGGGCCGTTCCAGCTGGGGACATTAATGGAGGCAGTGGCAGTGGCAGTGGCAGAGGCGTAATAAACGAGCGAAGCGTGTCGGAAATCACGGGGTTGAGCAGGTTTTCGAACAGAGGGAGCAGTAATGAGAGGAGCAATCAGCACCACCAAAACCATCAGCAGCGTTACCAACAGCGACAGCTCAGGCTCGTATCCAGGTGGATCGCTTGGATTTCGTCCCAGTCACGCCCAGCTGTACGGCCTGATCGTACTACTACTGGTGCTTCTTCCCCCACCACTCCACAGACTACACCACCACCACTGCCTTTACCCACTGTGGCCACTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

471

Amino Acids

51.63

Weight (kDa)

9.31

Isoelectric Point (pI)

54.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	152 - 195	2e-13	Ring finger domain
zf-RING_11	PF17123	152 - 181	1.1e-09	RING-like zinc finger
zf-C3HC4_2	PF13923	152 - 194	4e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	153 - 194	2.3e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	165 - 195	5.4e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05810
fragaria_vesca	FvH4_4g06660
malus_domestica	MD13G1236900.v1.1 MD16G1242200.v1.1
prunus_persica	Prupe.1G069300_v2.0.a1
pyrus_communis	pycom13g20980 pycom16g20300
rosa_chinensis	RchiOBHm_Chr3g0495141 RchiOBHm_Chr4g0398561
rosa_laevigata	RLG00000009344 RLG00000026064 RLG00000029692 RLG00000030599 RLG00000032695 RLG00000032696
rosa_multiflora	Rmu_co8139468.1_g000001 Rmu_co8270033.1_g000001 Rmu_co8275827.1_g000001 Rmu_sc0000185.1_g000029 Rmu_sc0000990.1_g000016 Rmu_sc0005217.1_g000007 Rmu_sc0005996.1_g000027 Rmu_sc0009001.1_g000015 Rmu_sc0013727.1_g000001 Rmu_sc0016350.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343530
rosa_rugosa	Rorug04G0009400
rosa_samantha	Rh1AG207300 Rh2AG231000 Rh2AG449700 Rh2CG436600 Rh2DG238800 Rh3DG271300 Rh4AG087300 Rh4BG083900 Rh4CG095500 Rh4DG078800 Rh4DG124400 Rh5DG085200 Rh6BG230400
rosa_wichuraiana	Rw1G018260 Rw1G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	578
AasI	GACNNNNNNGTC	2 cut(s)	392, 1050
AatII	GACGTC	1 cut(s)	681
Acc36I	ACCTGC	2 cut(s)	578, 1176
AccB1I	GGYRCC	1 cut(s)	726
AccBSI	CCGCTC	1 cut(s)	577
AccI	GTMKAC	2 cut(s)	543, 594
AccII	CGCG	2 cut(s)	306, 717
AccIII	TCCGGA	3 cut(s)	377, 789, 819
AclWI	GGATC	1 cut(s)	1295
AcoI	YGGCCR	2 cut(s)	228, 1404
AcvI	CACGTG	1 cut(s)	549
AcyI	GRCGYC	4 cut(s)	558, 624, 678, 727
AfaI	GTAC	4 cut(s)	180, 990, 1323, 1336
AfiI	CCNNNNNNNGG	4 cut(s)	137, 589, 721, 819
AflII	CTTAAG	1 cut(s)	889
AflIII	ACRYGT	2 cut(s)	546, 1049
AhdI	GACNNNNNGTC	1 cut(s)	778
AjiI	CACGTC	2 cut(s)	532, 1052
AjnI	CCWGG	3 cut(s)	798, 812, 1280
AluBI	AGCT	6 cut(s)	312, 807, 1066, 1100, 1267, 1319
AluI	AGCT	6 cut(s)	312, 807, 1066, 1100, 1267, 1319
Alw21I	GWGCWC	1 cut(s)	918
Alw26I	GTCTC	3 cut(s)	368, 724, 934
AlwI	GGATC	1 cut(s)	1295
Ama87I	CYCGRG	2 cut(s)	703, 721
Aor13HI	TCCGGA	3 cut(s)	377, 789, 819
AoxI	GGCC	8 cut(s)	218, 228, 390, 448, 880, 1089, 1325, 1404
ApeKI	GCWGC	4 cut(s)	6, 309, 748, 1246
ArsI	GACNNNNNNTTYG	2 cut(s)	447, 479
AseI	ATTAAT	1 cut(s)	1110
AspLEI	GCGC	4 cut(s)	306, 461, 729, 1077
AspS9I	GGNCC	6 cut(s)	219, 390, 493, 795, 810, 1089
AsuC2I	CCSGG	9 cut(s)	351, 389, 410, 434, 590, 599, 704, 705, 756
AsuHPI	GGTGA	3 cut(s)	64, 156, 463
AsuII	TTCGAA	1 cut(s)	1193
AvaI	CYCGRG	2 cut(s)	703, 721
AvaII	GGWCC	3 cut(s)	493, 795, 810
BalI	TGGCCA	2 cut(s)	230, 1406
BanI	GGYRCC	1 cut(s)	726
BanII	GRGCYC	1 cut(s)	486
BbrPI	CACGTG	1 cut(s)	549
BbsI	GAAGAC	2 cut(s)	609, 627
Bbv12I	GWGCWC	1 cut(s)	918
BbvI	GCAGC	3 cut(s)	321, 760, 1258
BccI	CCATC	3 cut(s)	239, 972, 1248
BceAI	ACGGC	7 cut(s)	377, 446, 463, 895, 979, 1076, 1340
BcgI	CGANNNNNNTGC	2 cut(s)	298, 332
BciT130I	CCWGG	3 cut(s)	800, 814, 1282
BciVI	GTATCC	1 cut(s)	1288
BclI	TGATCA	1 cut(s)	1026
BcnI	CCSGG	9 cut(s)	351, 389, 410, 434, 590, 599, 704, 705, 756
BcoDI	GTCTC	3 cut(s)	368, 724, 934
BfoI	RGCGCY	1 cut(s)	730
BfrI	CTTAAG	1 cut(s)	889
BfuAI	ACCTGC	2 cut(s)	578, 1176
BfuI	GTATCC	1 cut(s)	1288
Bme18I	GGWCC	3 cut(s)	493, 795, 810
BmeRI	GACNNNNNGTC	1 cut(s)	778
BmeT110I	CYCGRG	2 cut(s)	703, 721
BmgBI	CACGTC	2 cut(s)	532, 1052
BmgT120I	GGNCC	6 cut(s)	219, 390, 493, 795, 810, 1089
BmiI	GGNNCC	7 cut(s)	331, 728, 760, 797, 818, 968, 1090
BmrI	ACTGGG	2 cut(s)	1095, 1300
BmuI	ACTGGG	2 cut(s)	1095, 1300
BpiI	GAAGAC	2 cut(s)	609, 627
BpmI	CTGGAG	1 cut(s)	932
Bpu10I	CCTNAGC	1 cut(s)	1268
Bpu14I	TTCGAA	1 cut(s)	1193
BpuEI	CTTGAG	1 cut(s)	11
BpuMI	CCSGG	9 cut(s)	351, 389, 410, 434, 590, 599, 704, 705, 756
BsaAI	YACGTR	1 cut(s)	549
BsaHI	GRCGYC	4 cut(s)	558, 624, 678, 727
BsaI	GGTCTC	1 cut(s)	368
BsaJI	CCNNGG	5 cut(s)	433, 489, 703, 741, 798
BsaWI	WCCGGW	4 cut(s)	377, 417, 789, 819
BsaXI	ACNNNNNCTCC	6 cut(s)	548, 578, 1001, 1031, 1055, 1085
Bsc4I	CCNNNNNNNGG	4 cut(s)	137, 589, 721, 819
Bse118I	RCCGGY	1 cut(s)	953
Bse1I	ACTGG	3 cut(s)	1090, 1306, 1348
Bse3DI	GCAATG	1 cut(s)	144
BseAI	TCCGGA	3 cut(s)	377, 789, 819
BseBI	CCWGG	3 cut(s)	800, 814, 1282
BseDI	CCNNGG	5 cut(s)	433, 489, 703, 741, 798
BseGI	GGATG	2 cut(s)	346, 606
BseLI	CCNNNNNNNGG	4 cut(s)	137, 589, 721, 819
BseMI	GCAATG	1 cut(s)	144
BseMII	CTCAG	1 cut(s)	1282
BseNI	ACTGG	3 cut(s)	1090, 1306, 1348
BseRI	GAGGAG	9 cut(s)	68, 269, 272, 494, 724, 751, 754, 922, 1231
BseXI	GCAGC	3 cut(s)	321, 760, 1258
BseYI	CCCAGC	3 cut(s)	221, 1100, 1315
BsgI	GTGCAG	1 cut(s)	620
Bsh1236I	CGCG	2 cut(s)	306, 717
Bsh1285I	CGRYCG	1 cut(s)	388
BshFI	GGCC	8 cut(s)	220, 230, 392, 450, 882, 1091, 1327, 1406
BshNI	GGYRCC	1 cut(s)	726
BsiEI	CGRYCG	1 cut(s)	388
BsiHKAI	GWGCWC	1 cut(s)	918
BsiHKCI	CYCGRG	2 cut(s)	703, 721
BslFI	GGGAC	4 cut(s)	450, 781, 1118, 1288
BslI	CCNNNNNNNGG	4 cut(s)	137, 589, 721, 819
BsmAI	GTCTC	3 cut(s)	368, 724, 934
BsmBI	CGTCTC	2 cut(s)	724, 934
BsmFI	GGGAC	4 cut(s)	450, 781, 1118, 1288
BsmI	GAATGC	1 cut(s)	461
BsnI	GGCC	8 cut(s)	220, 230, 392, 450, 882, 1091, 1327, 1406
Bso31I	GGTCTC	1 cut(s)	368
BsoBI	CYCGRG	2 cut(s)	703, 721
Bsp119I	TTCGAA	1 cut(s)	1193
Bsp1286I	GDGCHC	2 cut(s)	486, 918
Bsp13I	TCCGGA	3 cut(s)	377, 789, 819
Bsp143I	GATC	5 cut(s)	941, 1000, 1026, 1287, 1330
BspANI	GGCC	8 cut(s)	220, 230, 392, 450, 882, 1091, 1327, 1406
BspCNI	CTCAG	1 cut(s)	1281
BspEI	TCCGGA	3 cut(s)	377, 789, 819
BspFNI	CGCG	2 cut(s)	306, 717
BspLI	GGNNCC	7 cut(s)	331, 728, 760, 797, 818, 968, 1090
BspMI	ACCTGC	2 cut(s)	578, 1176
BspPI	GGATC	1 cut(s)	1295
BspT104I	TTCGAA	1 cut(s)	1193
BspT107I	GGYRCC	1 cut(s)	726
BspTI	CTTAAG	1 cut(s)	889
BspTNI	GGTCTC	1 cut(s)	368
BsrBI	CCGCTC	1 cut(s)	577
BsrDI	GCAATG	1 cut(s)	144
BsrFI	RCCGGY	1 cut(s)	953
BsrI	ACTGG	3 cut(s)	1090, 1306, 1348
BssAI	RCCGGY	1 cut(s)	953
BssECI	CCNNGG	5 cut(s)	433, 489, 703, 741, 798
BssMI	GATC	5 cut(s)	941, 1000, 1026, 1287, 1330
BssNI	GRCGYC	4 cut(s)	558, 624, 678, 727
BssT1I	CCWWGG	1 cut(s)	741
Bst2UI	CCWGG	3 cut(s)	800, 814, 1282
Bst4CI	ACNGT	3 cut(s)	43, 1071, 1402
BstACI	GRCGYC	4 cut(s)	558, 624, 678, 727
BstAFI	CTTAAG	1 cut(s)	889
BstBAI	YACGTR	1 cut(s)	549
BstBI	TTCGAA	1 cut(s)	1193
BstC8I	GCNNGC	5 cut(s)	302, 518, 522, 575, 653
BstDEI	CTNAG	1 cut(s)	1268
BstF5I	GGATG	2 cut(s)	346, 606
BstFNI	CGCG	2 cut(s)	306, 717
BstH2I	RGCGCY	1 cut(s)	730
BstHHI	GCGC	4 cut(s)	306, 461, 729, 1077
BstKTI	GATC	5 cut(s)	944, 1003, 1029, 1290, 1333
BstMAI	GTCTC	3 cut(s)	368, 724, 934
BstMBI	GATC	5 cut(s)	941, 1000, 1026, 1287, 1330
BstMCI	CGRYCG	1 cut(s)	388
BstMWI	GCNNNNNNNGC	9 cut(s)	301, 306, 456, 465, 579, 845, 954, 1072, 1097
BstNI	CCWGG	3 cut(s)	800, 814, 1282
BstUI	CGCG	2 cut(s)	306, 717
BstV1I	GCAGC	3 cut(s)	321, 760, 1258
BstV2I	GAAGAC	2 cut(s)	609, 627
BsuI	GTATCC	1 cut(s)	1288
BsuRI	GGCC	8 cut(s)	220, 230, 392, 450, 882, 1091, 1327, 1406
BtrI	CACGTC	2 cut(s)	532, 1052
BtsCI	GGATG	2 cut(s)	346, 606
BtsI	GCAGTG	6 cut(s)	295, 1126, 1132, 1138, 1385, 1407
BtsIMutI	CAGTG	8 cut(s)	295, 1083, 1126, 1132, 1138, 1385, 1398, 1407
BveI	ACCTGC	2 cut(s)	578, 1176
Cac8I	GCNNGC	5 cut(s)	302, 518, 522, 575, 653
CfoI	GCGC	4 cut(s)	306, 461, 729, 1077
Cfr10I	RCCGGY	1 cut(s)	953
Cfr13I	GGNCC	6 cut(s)	219, 390, 493, 795, 810, 1089
Cfr9I	CCCGGG	1 cut(s)	703
CseI	GACGC	4 cut(s)	529, 566, 632, 706
CsiI	ACCWGGT	1 cut(s)	812
Csp6I	GTAC	4 cut(s)	179, 989, 1322, 1335
CviAII	CATG	2 cut(s)	226, 235
CviQI	GTAC	4 cut(s)	179, 989, 1322, 1335
DdeI	CTNAG	1 cut(s)	1268
DinI	GGCGCC	1 cut(s)	728
DpnI	GATC	5 cut(s)	943, 1002, 1028, 1289, 1332
DpnII	GATC	5 cut(s)	941, 1000, 1026, 1287, 1330
DrdI	GACNNNNNNGTC	2 cut(s)	392, 1050
DriI	GACNNNNNGTC	1 cut(s)	778
DseDI	GACNNNNNNGTC	2 cut(s)	392, 1050
EaeI	YGGCCR	2 cut(s)	228, 1404
Eam1105I	GACNNNNNGTC	1 cut(s)	778
EciI	GGCGGA	3 cut(s)	488, 701, 727
Eco130I	CCWWGG	1 cut(s)	741
Eco24I	GRGCYC	1 cut(s)	486
Eco31I	GGTCTC	1 cut(s)	368
Eco47I	GGWCC	3 cut(s)	493, 795, 810
Eco72I	CACGTG	1 cut(s)	549
Eco88I	CYCGRG	2 cut(s)	703, 721
EcoO109I	RGGNCCY	2 cut(s)	493, 795
EcoRII	CCWGG	3 cut(s)	798, 812, 1280
EcoT14I	CCWWGG	1 cut(s)	741
EcoT38I	GRGCYC	1 cut(s)	486
EgeI	GGCGCC	1 cut(s)	728
EheI	GGCGCC	1 cut(s)	728
ErhI	CCWWGG	1 cut(s)	741
Esp3I	CGTCTC	2 cut(s)	724, 934
FaeI	CATG	2 cut(s)	229, 238
FaiI	YATR	4 cut(s)	227, 236, 288, 1031
FalI	AAGNNNNNCTT	4 cut(s)	509, 541, 867, 899
FaqI	GGGAC	4 cut(s)	450, 781, 1118, 1288
FatI	CATG	2 cut(s)	225, 234
FauI	CCCGC	4 cut(s)	347, 352, 582, 844
FbaI	TGATCA	1 cut(s)	1026
FblI	GTMKAC	2 cut(s)	543, 594
FokI	GGATG	2 cut(s)	333, 593
FriOI	GRGCYC	1 cut(s)	486
GlaI	GCGC	4 cut(s)	305, 460, 728, 1076
GsaI	CCCAGC	3 cut(s)	225, 1104, 1319
GsuI	CTGGAG	1 cut(s)	932
HaeII	RGCGCY	1 cut(s)	730
HaeIII	GGCC	8 cut(s)	220, 230, 392, 450, 882, 1091, 1327, 1406
HgaI	GACGC	4 cut(s)	529, 566, 632, 706
HhaI	GCGC	4 cut(s)	306, 461, 729, 1077
Hin1I	GRCGYC	4 cut(s)	558, 624, 678, 727
Hin1II	CATG	2 cut(s)	229, 238
Hin6I	GCGC	4 cut(s)	304, 459, 727, 1075
HinP1I	GCGC	4 cut(s)	304, 459, 727, 1075
HincII	GTYRAC	2 cut(s)	544, 595
HindII	GTYRAC	2 cut(s)	544, 595
HinfI	GANTC	8 cut(s)	253, 381, 401, 477, 630, 661, 708, 921
HphI	GGTGA	3 cut(s)	64, 156, 463
Hpy166II	GTNNAC	3 cut(s)	190, 544, 595
Hpy188I	TCNGA	8 cut(s)	242, 249, 326, 344, 870, 1000, 1021, 1168
Hpy188III	TCNNGA	6 cut(s)	378, 508, 770, 790, 820, 1055
Hpy8I	GTNNAC	3 cut(s)	190, 544, 595
HpyAV	CCTTC	6 cut(s)	20, 64, 274, 535, 893, 1022
HpyCH4III	ACNGT	3 cut(s)	43, 1071, 1402
HpyCH4IV	ACGT	9 cut(s)	155, 269, 531, 548, 678, 779, 865, 987, 1051
HpyCH4V	TGCA	3 cut(s)	300, 516, 637
HpyF10VI	GCNNNNNNNGC	9 cut(s)	301, 306, 456, 465, 579, 845, 954, 1072, 1097
HpyF3I	CTNAG	1 cut(s)	1268
HpySE526I	ACGT	9 cut(s)	155, 269, 531, 548, 678, 779, 865, 987, 1051
Hsp92I	GRCGYC	4 cut(s)	558, 624, 678, 727
Hsp92II	CATG	2 cut(s)	229, 238
HspAI	GCGC	4 cut(s)	304, 459, 727, 1075
KasI	GGCGCC	1 cut(s)	726
Kpn2I	TCCGGA	3 cut(s)	377, 789, 819
Ksp22I	TGATCA	1 cut(s)	1026
Kzo9I	GATC	5 cut(s)	941, 1000, 1026, 1287, 1330
Lsp1109I	GCAGC	3 cut(s)	321, 760, 1258
MabI	ACCWGGT	1 cut(s)	812
MaeII	ACGT	9 cut(s)	155, 269, 531, 548, 678, 779, 865, 987, 1051
MaeIII	GTNAC	2 cut(s)	1250, 1308
MalI	GATC	5 cut(s)	943, 1002, 1028, 1289, 1332
MbiI	CCGCTC	1 cut(s)	577
MboI	GATC	5 cut(s)	941, 1000, 1026, 1287, 1330
MboII	GAAGA	6 cut(s)	49, 56, 266, 614, 632, 1344
MhlI	GDGCHC	2 cut(s)	486, 918
MlsI	TGGCCA	2 cut(s)	230, 1406
MluNI	TGGCCA	2 cut(s)	230, 1406
Mly113I	GGCGCC	1 cut(s)	727
MlyI	GAGTC	3 cut(s)	247, 395, 655
MmeI	TCCRAC	2 cut(s)	220, 1146
Mox20I	TGGCCA	2 cut(s)	230, 1406
MroI	TCCGGA	3 cut(s)	377, 789, 819
MscI	TGGCCA	2 cut(s)	230, 1406
MseI	TTAA	3 cut(s)	183, 890, 1110
Msp20I	TGGCCA	2 cut(s)	230, 1406
MspA1I	CMGCKG	3 cut(s)	807, 1100, 1319
MspCI	CTTAAG	1 cut(s)	889
Mva1269I	GAATGC	1 cut(s)	461
MvaI	CCWGG	3 cut(s)	800, 814, 1282
MvnI	CGCG	2 cut(s)	306, 717
MwoI	GCNNNNNNNGC	9 cut(s)	301, 306, 456, 465, 579, 845, 954, 1072, 1097
NarI	GGCGCC	1 cut(s)	727
NciI	CCSGG	9 cut(s)	351, 389, 410, 434, 590, 599, 704, 705, 756
NdeII	GATC	5 cut(s)	941, 1000, 1026, 1287, 1330
NlaIII	CATG	2 cut(s)	229, 238
NlaIV	GGNNCC	7 cut(s)	331, 728, 760, 797, 818, 968, 1090
NmeAIII	GCCGAG	1 cut(s)	223
NmuCI	GTSAC	1 cut(s)	1308
NspV	TTCGAA	1 cut(s)	1193
PaqCI	CACCTGC	1 cut(s)	578
PcsI	WCGNNNNNNNCGW	8 cut(s)	390, 459, 486, 528, 537, 540, 1158, 1330
PctI	GAATGC	1 cut(s)	461
PfeI	GAWTC	5 cut(s)	381, 477, 630, 708, 921
PflFI	GACNNNGTC	1 cut(s)	680
PleI	GAGTC	3 cut(s)	247, 395, 655
PluTI	GGCGCC	1 cut(s)	730
PmaCI	CACGTG	1 cut(s)	549
PmlI	CACGTG	1 cut(s)	549
PpsI	GAGTC	3 cut(s)	247, 395, 655
Ppu21I	YACGTR	1 cut(s)	549
PpuMI	RGGWCCY	2 cut(s)	493, 795
PshBI	ATTAAT	1 cut(s)	1110
Psp5II	RGGWCCY	2 cut(s)	493, 795
Psp6I	CCWGG	3 cut(s)	798, 812, 1280
PspCI	CACGTG	1 cut(s)	549
PspFI	CCCAGC	3 cut(s)	221, 1100, 1315
PspGI	CCWGG	3 cut(s)	798, 812, 1280
PspN4I	GGNNCC	7 cut(s)	331, 728, 760, 797, 818, 968, 1090
PspPI	GGNCC	6 cut(s)	219, 390, 493, 795, 810, 1089
PspPPI	RGGWCCY	2 cut(s)	493, 795
PsyI	GACNNNGTC	1 cut(s)	680
PvuII	CAGCTG	3 cut(s)	807, 1100, 1319
RsaI	GTAC	4 cut(s)	180, 990, 1323, 1336
RsaNI	GTAC	4 cut(s)	179, 989, 1322, 1335
SalI	GTCGAC	2 cut(s)	542, 593
SaqAI	TTAA	3 cut(s)	183, 890, 1110
Sau3AI	GATC	5 cut(s)	941, 1000, 1026, 1287, 1330
Sau96I	GGNCC	6 cut(s)	219, 390, 493, 795, 810, 1089
SchI	GAGTC	3 cut(s)	247, 395, 655
SduI	GDGCHC	2 cut(s)	486, 918
SexAI	ACCWGGT	1 cut(s)	812
SfoI	GGCGCC	1 cut(s)	728
SfuI	TTCGAA	1 cut(s)	1193
SgrAI	CRCCGGYG	1 cut(s)	953
SinI	GGWCC	3 cut(s)	493, 795, 810
SmaI	CCCGGG	1 cut(s)	705
SmlI	CTYRAG	2 cut(s)	26, 889
SmoI	CTYRAG	2 cut(s)	26, 889
SspDI	GGCGCC	1 cut(s)	726
StyI	CCWWGG	1 cut(s)	741
TaaI	ACNGT	3 cut(s)	43, 1071, 1402
TaiI	ACGT	9 cut(s)	158, 272, 534, 551, 681, 782, 868, 990, 1054
TatI	WGTACW	1 cut(s)	178
TauI	GCSGC	9 cut(s)	50, 53, 172, 309, 585, 717, 848, 851, 960
TfiI	GAWTC	5 cut(s)	381, 477, 630, 708, 921
Tru1I	TTAA	3 cut(s)	183, 890, 1110
Tru9I	TTAA	3 cut(s)	183, 890, 1110
TscAI	CASTG	8 cut(s)	302, 1090, 1126, 1132, 1138, 1392, 1405, 1414
TseFI	GTSAC	1 cut(s)	1308
TseI	GCWGC	4 cut(s)	6, 309, 748, 1246
Tsp45I	GTSAC	1 cut(s)	1308
TspGWI	ACGGA	2 cut(s)	356, 1056
TspMI	CCCGGG	1 cut(s)	703
TspRI	CASTG	8 cut(s)	302, 1090, 1126, 1132, 1138, 1392, 1405, 1414
Tth111I	GACNNNGTC	1 cut(s)	680
Vha464I	CTTAAG	1 cut(s)	889
VpaK11BI	GGWCC	3 cut(s)	493, 795, 810
VspI	ATTAAT	1 cut(s)	1110
XmaI	CCCGGG	1 cut(s)	703
XmiI	GTMKAC	2 cut(s)	543, 594
ZraI	GACGTC	1 cut(s)	679

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.