Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002352

Physical Location & Seq

Genomic Coordinates Forward (+)

51342313 .. 51343878

Gene Structure 1566 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009344

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGTGCGATGGGGTATTAATGCATTTGTCTGGTTTTGTTTGTACGTTTGGACAAGAATCTGAGGCCCCTCATTTTCCGCCATCAAACTCTACAAACCCTCTCACCCCGCTAACAGCTTCTGCTTCCTTCCTACTTGTTCATTTCTCCATCCCAAAAAACATGGGCTGCCTTCTCTCTCTCTCTCTCTCTCTCAAGCCCACCACCACCGCCGCCGCAGCCTTCTTCGTTCTTCTAATCACCCTCCTCTCTTTTCTCTCTACACCCTCCAATGCCGACCCCGACCCGGACCCGAAAATGGGCGACATTGCCACAACGTCTGCTTCACCGCCGCCGCCTGTTAATGTGGACACCGCCGAGAAACCCAAGTCGTTCCGGCCCAGCATGGCCATCATGGTCGGAGTTCTGACGACTCTGTTCTCCTTCACGTTTCTTCTCCTCCTCTACGCCAAGCACTGCAAGCGCGGCAGCTTCGTCGTCATCGGAGGAACCGCCAACTCCGGACCTCCCGGCGGGGCGGGTCTCCGTAAAAACTCCGGAATCGACCGGGCCGTCGTCGAGTCCCTCCCGGTTTTCCGGTTCAGGTCGCTCCGGGGACACAAGGACGGCCTCGAATGCGCCGTCTGCCTCACCCGATTCGAGCCCACCGAGGTCCTCCGCCTCCTCCCGAAATGCAAGCACGCCTTCCACGTCGAGTGCGTCGACACGTGGCTCGACGCCCACTCCACCTGCCCGCTCTGCCGCTACCGGGTCGACCCGGAAGACATCCTCCTAATCGAAGACGCCAGAATCCTGCACCACCAGAACAGCCAGCCCCAGACTCCACACCAAAACGACGTCGTCATCAACATCGAAACCGACCCGGGAATCCGCCGCGTCTCGGGGCGCCACTCCTCCGCCTTGGAGCAGCGACCCGGCTCCTCCTCCTCTCACCACAACACGTCGTCGTTCCGGAGGTCCCTCGACAGCTGGACCTGGTTCCGGAAAAAAACCGAACCCGCGGCCGCCGCCGAAAGCCAAGAACGTCCGAGAAAAGACGGCCTCCTTTTAAGCCACGACAAAACGAGGCTGGAGCACCGAATCATCGTCTCCTCCCCCAGATCAAGCAACACCGGCGGCGGTGGGTTCCACCAGCGATGGAGCGACGTACAGCCGTCCGATCTTCTCTACCTTCGCACCGAGATGATCATAAGCGAGAACGGACTGACACGTCAGGGGCAGGGGCAGGAGCAGCAGGAGGTACCGTTGCGCTGCGGAAATGGGGCCGTTCCAGCTGGGGAGAGTAATGGAGGGAGTGCCAGTGGCAGTGGCAGAGGCGTAATAAACGAGCGAAGCGTGTCGGAAATCACGGGGTTGAGCAGGTTTTCGAACAGAGGGAGCAGTAATGAGAGGAGCAATCAGCACCACCAAAACCACCAGCAGCGTTACCAACAGCGACAGCTCAGGCTCGTATCCAGGTGGGTCGCTTGGATTTCGTCCCAGTCACGCCCAGCTATACGGTCTGATCGTACTACTGGTGCTTCTTCCCCCACCACTCCACCACCACCACCGCCTGTGGCCACTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

522

Amino Acids

56.86

Weight (kDa)

9.17

Isoelectric Point (pI)

56.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	204 - 247	2.2e-13	Ring finger domain
zf-RING_11	PF17123	204 - 233	1.2e-09	RING-like zinc finger
zf-C3HC4_2	PF13923	204 - 246	4.6e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	205 - 246	2.6e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	217 - 247	6.1e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05810
fragaria_vesca	FvH4_4g06660
malus_domestica	MD13G1236900.v1.1 MD16G1242200.v1.1
prunus_persica	Prupe.1G069300_v2.0.a1
pyrus_communis	pycom13g20980 pycom16g20300
rosa_chinensis	RchiOBHm_Chr3g0495141 RchiOBHm_Chr4g0398561
rosa_laevigata	RLG00000009344 RLG00000026064 RLG00000029692 RLG00000030599 RLG00000032695 RLG00000032696
rosa_multiflora	Rmu_co8139468.1_g000001 Rmu_co8270033.1_g000001 Rmu_co8275827.1_g000001 Rmu_sc0000185.1_g000029 Rmu_sc0000990.1_g000016 Rmu_sc0005217.1_g000007 Rmu_sc0005996.1_g000027 Rmu_sc0009001.1_g000015 Rmu_sc0013727.1_g000001 Rmu_sc0016350.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343530
rosa_rugosa	Rorug04G0009400
rosa_samantha	Rh1AG207300 Rh2AG231000 Rh2AG449700 Rh2CG436600 Rh2DG238800 Rh3DG271300 Rh4AG087300 Rh4BG083900 Rh4CG095500 Rh4DG078800 Rh4DG124400 Rh5DG085200 Rh6BG230400
rosa_wichuraiana	Rw1G018260 Rw1G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	734
AasI	GACNNNNNNGTC	2 cut(s)	548, 1206
AatII	GACGTC	1 cut(s)	837
Acc36I	ACCTGC	2 cut(s)	734, 1347
Acc65I	GGTACC	1 cut(s)	1237
AccB1I	GGYRCC	2 cut(s)	882, 1237
AccBSI	CCGCTC	1 cut(s)	733
AccI	GTMKAC	2 cut(s)	699, 750
AccII	CGCG	3 cut(s)	462, 873, 998
AccIII	TCCGGA	4 cut(s)	497, 533, 948, 978
AcoI	YGGCCR	3 cut(s)	384, 999, 1554
AcvI	CACGTG	1 cut(s)	705
AcyI	GRCGYC	4 cut(s)	714, 780, 834, 883
AfaI	GTAC	4 cut(s)	43, 1146, 1239, 1507
AfiI	CCNNNNNNNGG	7 cut(s)	283, 295, 296, 509, 745, 877, 978
AflIII	ACRYGT	3 cut(s)	702, 936, 1205
AjiI	CACGTC	3 cut(s)	688, 939, 1208
AjnI	CCWGG	2 cut(s)	971, 1451
AluBI	AGCT	6 cut(s)	116, 468, 966, 1271, 1438, 1490
AluI	AGCT	6 cut(s)	116, 468, 966, 1271, 1438, 1490
Alw21I	GWGCWC	1 cut(s)	1074
Alw26I	GTCTC	3 cut(s)	524, 880, 1090
AlwNI	CAGNNNCTG	1 cut(s)	119
Ama87I	CYCGRG	2 cut(s)	859, 877
Aor13HI	TCCGGA	4 cut(s)	497, 533, 948, 978
AoxI	GGCC	9 cut(s)	63, 374, 384, 546, 604, 999, 1036, 1260, 1554
ApeKI	GCWGC	7 cut(s)	165, 215, 465, 904, 1228, 1248, 1417
ArsI	GACNNNNNNTTYG	2 cut(s)	603, 635
AseI	ATTAAT	1 cut(s)	17
Asp718I	GGTACC	1 cut(s)	1237
AspLEI	GCGC	4 cut(s)	462, 617, 885, 1248
AspS9I	GGNCC	9 cut(s)	64, 286, 375, 500, 546, 649, 954, 969, 1260
AsuHPI	GGTGA	5 cut(s)	94, 229, 315, 619, 920
AsuII	TTCGAA	1 cut(s)	1364
AvaI	CYCGRG	2 cut(s)	859, 877
AvaII	GGWCC	5 cut(s)	286, 500, 649, 954, 969
BalI	TGGCCA	2 cut(s)	386, 1556
BanI	GGYRCC	2 cut(s)	882, 1237
BanII	GRGCYC	1 cut(s)	642
BbrPI	CACGTG	1 cut(s)	705
BbsI	GAAGAC	2 cut(s)	765, 783
Bbv12I	GWGCWC	1 cut(s)	1074
BbvI	GCAGC	7 cut(s)	152, 227, 477, 916, 1235, 1240, 1429
BccI	CCATC	5 cut(s)	2, 88, 155, 395, 1128
BceAI	ACGGC	6 cut(s)	533, 602, 619, 1051, 1135, 1247
BcgI	CGANNNNNNTGC	2 cut(s)	454, 488
BciT130I	CCWGG	2 cut(s)	973, 1453
BciVI	GTATCC	1 cut(s)	1459
BclI	TGATCA	1 cut(s)	1182
BcoDI	GTCTC	3 cut(s)	524, 880, 1090
BfoI	RGCGCY	1 cut(s)	886
BfuAI	ACCTGC	2 cut(s)	734, 1347
BfuI	GTATCC	1 cut(s)	1459
Bme18I	GGWCC	5 cut(s)	286, 500, 649, 954, 969
BmeT110I	CYCGRG	2 cut(s)	859, 877
BmgBI	CACGTC	3 cut(s)	688, 939, 1208
BmgT120I	GGNCC	9 cut(s)	64, 286, 375, 500, 546, 649, 954, 969, 1260
BmrI	ACTGGG	1 cut(s)	1471
BmuI	ACTGGG	1 cut(s)	1471
BpiI	GAAGAC	2 cut(s)	765, 783
BpmI	CTGGAG	1 cut(s)	1088
Bpu10I	CCTNAGC	1 cut(s)	1439
Bpu14I	TTCGAA	1 cut(s)	1364
BpuEI	CTTGAG	1 cut(s)	176
BsaAI	YACGTR	1 cut(s)	705
BsaHI	GRCGYC	4 cut(s)	714, 780, 834, 883
BsaI	GGTCTC	1 cut(s)	524
BsaJI	CCNNGG	5 cut(s)	589, 645, 859, 897, 996
BsaWI	WCCGGW	5 cut(s)	497, 533, 573, 948, 978
BsaXI	ACNNNNNCTCC	6 cut(s)	704, 734, 1226, 1256, 1282, 1312
Bsc4I	CCNNNNNNNGG	7 cut(s)	283, 295, 296, 509, 745, 877, 978
Bse118I	RCCGGY	1 cut(s)	1109
Bse1I	ACTGG	3 cut(s)	1296, 1477, 1516
Bse3DI	GCAATG	1 cut(s)	303
BseAI	TCCGGA	4 cut(s)	497, 533, 948, 978
BseBI	CCWGG	2 cut(s)	973, 1453
BseDI	CCNNGG	5 cut(s)	589, 645, 859, 897, 996
BseGI	GGATG	2 cut(s)	147, 762
BseLI	CCNNNNNNNGG	7 cut(s)	283, 295, 296, 509, 745, 877, 978
BseMI	GCAATG	1 cut(s)	303
BseMII	CTCAG	2 cut(s)	51, 1453
BseNI	ACTGG	3 cut(s)	1296, 1477, 1516
BseX3I	CGGCCG	1 cut(s)	999
BseXI	GCAGC	7 cut(s)	152, 227, 477, 916, 1235, 1240, 1429
BseYI	CCCAGC	3 cut(s)	377, 1271, 1486
BsgI	GTGCAG	1 cut(s)	776
Bsh1236I	CGCG	3 cut(s)	462, 873, 998
Bsh1285I	CGRYCG	2 cut(s)	544, 1002
BshFI	GGCC	9 cut(s)	65, 376, 386, 548, 606, 1001, 1038, 1262, 1556
BshNI	GGYRCC	2 cut(s)	882, 1237
BsiEI	CGRYCG	2 cut(s)	544, 1002
BsiHKAI	GWGCWC	1 cut(s)	1074
BsiHKCI	CYCGRG	2 cut(s)	859, 877
BslFI	GGGAC	4 cut(s)	544, 606, 940, 1459
BslI	CCNNNNNNNGG	7 cut(s)	283, 295, 296, 509, 745, 877, 978
BsmAI	GTCTC	3 cut(s)	524, 880, 1090
BsmBI	CGTCTC	2 cut(s)	880, 1090
BsmFI	GGGAC	4 cut(s)	544, 606, 940, 1459
BsmI	GAATGC	1 cut(s)	617
BsnI	GGCC	9 cut(s)	65, 376, 386, 548, 606, 1001, 1038, 1262, 1556
Bso31I	GGTCTC	1 cut(s)	524
BsoBI	CYCGRG	2 cut(s)	859, 877
Bsp119I	TTCGAA	1 cut(s)	1364
Bsp1286I	GDGCHC	2 cut(s)	642, 1074
Bsp13I	TCCGGA	4 cut(s)	497, 533, 948, 978
Bsp143I	GATC	4 cut(s)	1097, 1156, 1182, 1501
BspANI	GGCC	9 cut(s)	65, 376, 386, 548, 606, 1001, 1038, 1262, 1556
BspCNI	CTCAG	2 cut(s)	52, 1452
BspEI	TCCGGA	4 cut(s)	497, 533, 948, 978
BspFNI	CGCG	3 cut(s)	462, 873, 998
BspMI	ACCTGC	2 cut(s)	734, 1347
BspT104I	TTCGAA	1 cut(s)	1364
BspT107I	GGYRCC	2 cut(s)	882, 1237
BspTNI	GGTCTC	1 cut(s)	524
BsrBI	CCGCTC	1 cut(s)	733
BsrDI	GCAATG	1 cut(s)	303
BsrFI	RCCGGY	1 cut(s)	1109
BsrI	ACTGG	3 cut(s)	1296, 1477, 1516
BssAI	RCCGGY	1 cut(s)	1109
BssECI	CCNNGG	5 cut(s)	589, 645, 859, 897, 996
BssMI	GATC	4 cut(s)	1097, 1156, 1182, 1501
BssNI	GRCGYC	4 cut(s)	714, 780, 834, 883
BssT1I	CCWWGG	1 cut(s)	897
Bst2UI	CCWGG	2 cut(s)	973, 1453
Bst4CI	ACNGT	2 cut(s)	1242, 1497
BstACI	GRCGYC	4 cut(s)	714, 780, 834, 883
BstBAI	YACGTR	1 cut(s)	705
BstBI	TTCGAA	1 cut(s)	1364
BstC8I	GCNNGC	5 cut(s)	458, 674, 678, 731, 809
BstDEI	CTNAG	2 cut(s)	60, 1439
BstDSI	CCRYGG	1 cut(s)	996
BstF5I	GGATG	2 cut(s)	147, 762
BstFNI	CGCG	3 cut(s)	462, 873, 998
BstH2I	RGCGCY	1 cut(s)	886
BstHHI	GCGC	4 cut(s)	462, 617, 885, 1248
BstKTI	GATC	4 cut(s)	1100, 1159, 1185, 1504
BstMAI	GTCTC	3 cut(s)	524, 880, 1090
BstMBI	GATC	4 cut(s)	1097, 1156, 1182, 1501
BstMCI	CGRYCG	2 cut(s)	544, 1002
BstNI	CCWGG	2 cut(s)	973, 1453
BstUI	CGCG	3 cut(s)	462, 873, 998
BstV1I	GCAGC	7 cut(s)	152, 227, 477, 916, 1235, 1240, 1429
BstV2I	GAAGAC	2 cut(s)	765, 783
BstZI	CGGCCG	1 cut(s)	999
BsuI	GTATCC	1 cut(s)	1459
BsuRI	GGCC	9 cut(s)	65, 376, 386, 548, 606, 1001, 1038, 1262, 1556
BtgI	CCRYGG	1 cut(s)	996
BtgZI	GCGATG	2 cut(s)	21, 1147
BtrI	CACGTC	3 cut(s)	688, 939, 1208
BtsCI	GGATG	2 cut(s)	147, 762
BtsI	GCAGTG	3 cut(s)	451, 1309, 1557
BtsIMutI	CAGTG	4 cut(s)	451, 1303, 1309, 1557
BveI	ACCTGC	2 cut(s)	734, 1347
Cac8I	GCNNGC	5 cut(s)	458, 674, 678, 731, 809
CaiI	CAGNNNCTG	1 cut(s)	119
CciNI	GCGGCCGC	1 cut(s)	999
CfoI	GCGC	4 cut(s)	462, 617, 885, 1248
Cfr10I	RCCGGY	1 cut(s)	1109
Cfr13I	GGNCC	9 cut(s)	64, 286, 375, 500, 546, 649, 954, 969, 1260
Cfr42I	CCGCGG	1 cut(s)	999
Cfr9I	CCCGGG	1 cut(s)	859
CseI	GACGC	4 cut(s)	685, 722, 788, 862
CsiI	ACCWGGT	1 cut(s)	971
Csp6I	GTAC	4 cut(s)	42, 1145, 1238, 1506
CviAII	CATG	3 cut(s)	160, 382, 391
CviQI	GTAC	4 cut(s)	42, 1145, 1238, 1506
DdeI	CTNAG	2 cut(s)	60, 1439
DinI	GGCGCC	1 cut(s)	884
DpnI	GATC	4 cut(s)	1099, 1158, 1184, 1503
DpnII	GATC	4 cut(s)	1097, 1156, 1182, 1501
DrdI	GACNNNNNNGTC	2 cut(s)	548, 1206
DseDI	GACNNNNNNGTC	2 cut(s)	548, 1206
EaeI	YGGCCR	3 cut(s)	384, 999, 1554
EagI	CGGCCG	1 cut(s)	999
EciI	GGCGGA	4 cut(s)	66, 644, 857, 883
EclXI	CGGCCG	1 cut(s)	999
Eco130I	CCWWGG	1 cut(s)	897
Eco24I	GRGCYC	1 cut(s)	642
Eco31I	GGTCTC	1 cut(s)	524
Eco47I	GGWCC	5 cut(s)	286, 500, 649, 954, 969
Eco52I	CGGCCG	1 cut(s)	999
Eco72I	CACGTG	1 cut(s)	705
Eco88I	CYCGRG	2 cut(s)	859, 877
EcoO109I	RGGNCCY	3 cut(s)	64, 649, 954
EcoRII	CCWGG	2 cut(s)	971, 1451
EcoT14I	CCWWGG	1 cut(s)	897
EcoT22I	ATGCAT	1 cut(s)	24
EcoT38I	GRGCYC	1 cut(s)	642
EgeI	GGCGCC	1 cut(s)	884
EheI	GGCGCC	1 cut(s)	884
ErhI	CCWWGG	1 cut(s)	897
Esp3I	CGTCTC	2 cut(s)	880, 1090
FaeI	CATG	3 cut(s)	163, 385, 394
FaiI	YATR	5 cut(s)	161, 383, 392, 1187, 1493
FalI	AAGNNNNNCTT	2 cut(s)	665, 697
FaqI	GGGAC	4 cut(s)	544, 606, 940, 1459
FatI	CATG	3 cut(s)	159, 381, 390
FauI	CCCGC	5 cut(s)	114, 503, 508, 738, 1003
FbaI	TGATCA	1 cut(s)	1182
FblI	GTMKAC	2 cut(s)	699, 750
FokI	GGATG	2 cut(s)	134, 749
FriOI	GRGCYC	1 cut(s)	642
GlaI	GCGC	4 cut(s)	461, 616, 884, 1247
GsaI	CCCAGC	3 cut(s)	381, 1275, 1490
GsuI	CTGGAG	1 cut(s)	1088
HaeII	RGCGCY	1 cut(s)	886
HaeIII	GGCC	9 cut(s)	65, 376, 386, 548, 606, 1001, 1038, 1262, 1556
HgaI	GACGC	4 cut(s)	685, 722, 788, 862
HhaI	GCGC	4 cut(s)	462, 617, 885, 1248
Hin1I	GRCGYC	4 cut(s)	714, 780, 834, 883
Hin1II	CATG	3 cut(s)	163, 385, 394
Hin6I	GCGC	4 cut(s)	460, 615, 883, 1246
HinP1I	GCGC	4 cut(s)	460, 615, 883, 1246
HincII	GTYRAC	2 cut(s)	700, 751
HindII	GTYRAC	2 cut(s)	700, 751
HinfI	GANTC	9 cut(s)	56, 409, 537, 557, 633, 786, 817, 864, 1077
HphI	GGTGA	5 cut(s)	94, 229, 315, 619, 920
Hpy166II	GTNNAC	3 cut(s)	346, 700, 751
Hpy188I	TCNGA	8 cut(s)	61, 398, 405, 482, 1026, 1156, 1339, 1501
Hpy188III	TCNNGA	5 cut(s)	498, 534, 664, 949, 979
Hpy8I	GTNNAC	3 cut(s)	346, 700, 751
HpyAV	CCTTC	6 cut(s)	136, 179, 229, 430, 691, 1178
HpyCH4III	ACNGT	2 cut(s)	1242, 1497
HpyCH4V	TGCA	4 cut(s)	22, 456, 672, 793
HpyF3I	CTNAG	2 cut(s)	60, 1439
Hsp92I	GRCGYC	4 cut(s)	714, 780, 834, 883
Hsp92II	CATG	3 cut(s)	163, 385, 394
HspAI	GCGC	4 cut(s)	460, 615, 883, 1246
KasI	GGCGCC	1 cut(s)	882
Kpn2I	TCCGGA	4 cut(s)	497, 533, 948, 978
KpnI	GGTACC	1 cut(s)	1241
Ksp22I	TGATCA	1 cut(s)	1182
KspI	CCGCGG	1 cut(s)	999
Kzo9I	GATC	4 cut(s)	1097, 1156, 1182, 1501
LmnI	GCTCC	8 cut(s)	591, 901, 920, 1069, 1137, 1225, 1374, 1389
Lsp1109I	GCAGC	7 cut(s)	152, 227, 477, 916, 1235, 1240, 1429
MabI	ACCWGGT	1 cut(s)	971
MaeIII	GTNAC	2 cut(s)	1421, 1479
MalI	GATC	4 cut(s)	1099, 1158, 1184, 1503
MbiI	CCGCTC	1 cut(s)	733
MboI	GATC	4 cut(s)	1097, 1156, 1182, 1501
MboII	GAAGA	7 cut(s)	214, 221, 422, 770, 788, 1151, 1512
MhlI	GDGCHC	2 cut(s)	642, 1074
MlsI	TGGCCA	2 cut(s)	386, 1556
MluNI	TGGCCA	2 cut(s)	386, 1556
Mly113I	GGCGCC	1 cut(s)	883
MlyI	GAGTC	3 cut(s)	403, 566, 811
MmeI	TCCRAC	2 cut(s)	376, 1317
Mox20I	TGGCCA	2 cut(s)	386, 1556
Mph1103I	ATGCAT	1 cut(s)	24
MroI	TCCGGA	4 cut(s)	497, 533, 948, 978
MscI	TGGCCA	2 cut(s)	386, 1556
MseI	TTAA	3 cut(s)	17, 339, 1046
MslI	CAYNNNNRTG	1 cut(s)	1178
Msp20I	TGGCCA	2 cut(s)	386, 1556
MspA1I	CMGCKG	3 cut(s)	966, 998, 1271
Mva1269I	GAATGC	1 cut(s)	617
MvaI	CCWGG	2 cut(s)	973, 1453
MvnI	CGCG	3 cut(s)	462, 873, 998
NarI	GGCGCC	1 cut(s)	883
NdeII	GATC	4 cut(s)	1097, 1156, 1182, 1501
NlaIII	CATG	3 cut(s)	163, 385, 394
NmeAIII	GCCGAG	1 cut(s)	379
NmuCI	GTSAC	1 cut(s)	1479
NotI	GCGGCCGC	1 cut(s)	999
NsiI	ATGCAT	1 cut(s)	24
NspV	TTCGAA	1 cut(s)	1364
PaqCI	CACCTGC	1 cut(s)	734
PcsI	WCGNNNNNNNCGW	8 cut(s)	546, 615, 642, 684, 693, 696, 1329, 1501
PctI	GAATGC	1 cut(s)	617
PfeI	GAWTC	6 cut(s)	56, 537, 633, 786, 864, 1077
PflFI	GACNNNGTC	1 cut(s)	836
PleI	GAGTC	3 cut(s)	403, 565, 811
PluTI	GGCGCC	1 cut(s)	886
PmaCI	CACGTG	1 cut(s)	705
PmlI	CACGTG	1 cut(s)	705
PpsI	GAGTC	3 cut(s)	403, 565, 811
Ppu21I	YACGTR	1 cut(s)	705
PpuMI	RGGWCCY	2 cut(s)	649, 954
PshBI	ATTAAT	1 cut(s)	17
Psp5II	RGGWCCY	2 cut(s)	649, 954
Psp6I	CCWGG	2 cut(s)	971, 1451
PspCI	CACGTG	1 cut(s)	705
PspFI	CCCAGC	3 cut(s)	377, 1271, 1486
PspGI	CCWGG	2 cut(s)	971, 1451
PspPI	GGNCC	9 cut(s)	64, 286, 375, 500, 546, 649, 954, 969, 1260
PspPPI	RGGWCCY	2 cut(s)	649, 954
PstNI	CAGNNNCTG	1 cut(s)	119
PsyI	GACNNNGTC	1 cut(s)	836
PvuII	CAGCTG	2 cut(s)	966, 1271
RsaI	GTAC	4 cut(s)	43, 1146, 1239, 1507
RsaNI	GTAC	4 cut(s)	42, 1145, 1238, 1506
RseI	CAYNNNNRTG	1 cut(s)	1178
SacII	CCGCGG	1 cut(s)	999
SalI	GTCGAC	2 cut(s)	698, 749
SaqAI	TTAA	3 cut(s)	17, 339, 1046
Sau3AI	GATC	4 cut(s)	1097, 1156, 1182, 1501
Sau96I	GGNCC	9 cut(s)	64, 286, 375, 500, 546, 649, 954, 969, 1260
SchI	GAGTC	3 cut(s)	403, 566, 811
SduI	GDGCHC	2 cut(s)	642, 1074
SexAI	ACCWGGT	1 cut(s)	971
SfoI	GGCGCC	1 cut(s)	884
Sfr303I	CCGCGG	1 cut(s)	999
SfuI	TTCGAA	1 cut(s)	1364
SgrAI	CRCCGGYG	1 cut(s)	1109
SgrBI	CCGCGG	1 cut(s)	999
SinI	GGWCC	5 cut(s)	286, 500, 649, 954, 969
SmaI	CCCGGG	1 cut(s)	861
SmiMI	CAYNNNNRTG	1 cut(s)	1178
SmlI	CTYRAG	1 cut(s)	191
SmoI	CTYRAG	1 cut(s)	191
SspDI	GGCGCC	1 cut(s)	882
StyI	CCWWGG	1 cut(s)	897
TaaI	ACNGT	2 cut(s)	1242, 1497
TfiI	GAWTC	6 cut(s)	56, 537, 633, 786, 864, 1077
Tru1I	TTAA	3 cut(s)	17, 339, 1046
Tru9I	TTAA	3 cut(s)	17, 339, 1046
TscAI	CASTG	4 cut(s)	458, 1303, 1309, 1564
TseFI	GTSAC	1 cut(s)	1479
TseI	GCWGC	7 cut(s)	165, 215, 465, 904, 1228, 1248, 1417
Tsp45I	GTSAC	1 cut(s)	1479
TspDTI	ATGAA	1 cut(s)	128
TspGWI	ACGGA	2 cut(s)	512, 1212
TspMI	CCCGGG	1 cut(s)	859
TspRI	CASTG	4 cut(s)	458, 1303, 1309, 1564
Tth111I	GACNNNGTC	1 cut(s)	836
VpaK11BI	GGWCC	5 cut(s)	286, 500, 649, 954, 969
VspI	ATTAAT	1 cut(s)	17
XmaI	CCCGGG	1 cut(s)	859
XmiI	GTMKAC	2 cut(s)	699, 750
ZraI	GACGTC	1 cut(s)	835
Zsp2I	ATGCAT	1 cut(s)	24

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.