Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0002352

Physical Location & Seq

Genomic Coordinates Reverse (-)

17217112 .. 17218671

Gene Structure 1560 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g20980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGTTTGGGCAAGAATCTCAAGAAAGAAGCCCCTCCTCCTTTTGCGCCTACAAAACTACAGACTCTTTCGCCCTCACGCCGCCAAGATTCTTCCCTCCCTCCGCCTCCTGCTGCCACTCCCGCCTCATACACACACACACACAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAAATGGGCCTCCTCTTTCCTTTTTTCAAGCCCACCACCCCCGCCACCTTCTTCCTCCTCCTCCTCCCCACCCTCCTCCTCTCTTTTCTCACCAAACCCACTCGCGCGCACCCACACGCAGCAGCAGCAGATTCCCATCTCTCCACCCCCGGCTTCGGCGACATTGCCAGCTCTGTCAACCCATCTCCCTCACCGCCCCATCCTCTTCAACCCAACAACGCGGGCCCCACCAGGTCCTCCTCTCTCCGGCCGAGCATAGCCATAATCGTCGCCGTTCTCACCACCGTCTTCTCCGTCGTCTTCCTTATTCTCCTCTACGCCAAGCACTGCAAGCGCGGTGGTCTAGTTATCGTCGGCTCTAACTCCAATTCCGGACCCACCGGACCCGCCCCACGTAAAAACTCCGGCATTGACCGCTCCATCGTCGAGTCCCTACCAGTGTTCCGCTTCAGGTCCCTTCGCGGCCACAAGGACGGGCTCGAGTGCGCGGTCTGCCTGACCCGGTTCGACCAAACCGAGGTCCTCCGTCTCCTGCCAAAATGCAAACACGCGTTCCACGTCGAGTGCGTCGATACGTGGCTCGACGCCCACTCCACCTGCCCGCTCTGCCGGTACCGGATCGACCCCGAAGACGTCCTCTTAGTCGACGACGCCGCAAAGCTGTTGCATCCGAAGAATAGCGATGTCGTTTTGGAGATCGAGAACGACCCGGTTTTTCGTCGGATTTCGGGGCGGCACTCGTTCGCCGGAGAACACAGACGGGGACATCATCAAACCCAAACGTGGTCGTTTCGGAGGTCGCTGGACAGCTGGACAGCAATCCGAATGAAGAGCGAGCCGGCCACCGTCGGATGCTTCAACCGACCCAGAAAAGATGGACTCCTGTTGGGTCAAGACAGTACGAGGTTGGAGCACCAGATCATCGTGTCTCCTACCGGGTCGGGGTCTGGTCCCGGTGGGCTCCAGCAGAGATGGAGCGACGTACTGCCGTCGGATCTTCTGTATCTACGGTCGGAAATGATCATGAGCGAGGGCATGACACGTCAGCGGGCGCAGCAGAATGAGAAGAGTAATGGGCAGCAGGTGATTGCGGGGCCCGCGGCAGGAGGAGGGCCCGGAGGGATTGATGGGAACAGGAGATCATGGAGCTGTGGTGGTGGCGGCGGCGGGAGCGTAATAAATTCAAGAAGCGTGTTGGAAATCACGGGCCTGAGCAGGTTTTCGAACAGAGCCACGGGGGGCAATGAGAGCCAACAGGAACAACAACAACAACGACAGCTCAAGCTTGTGGCCAGGTGGCTGGCCTGGGTTTCTTCTCTCTCGCGACCGGCGATACGGACGGAGCGTACTACTATTCCCACCCCCACTGCTCCACCGCCCATTTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

520

Amino Acids

56.9

Weight (kDa)

9.96

Isoelectric Point (pI)

60.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	218 - 261	1.9e-13	Ring finger domain
zf-RING_11	PF17123	218 - 247	8.3e-09	RING-like zinc finger
zf-C3HC4_2	PF13923	218 - 260	4.4e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	219 - 260	1.3e-06	Zinc finger, C3HC4 type (RING finger)
zf-rbx1	PF12678	225 - 261	2.9e-08	RING-H2 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05810
fragaria_vesca	FvH4_4g06660
malus_domestica	MD13G1236900.v1.1 MD16G1242200.v1.1
prunus_persica	Prupe.1G069300_v2.0.a1
pyrus_communis	pycom13g20980 pycom16g20300
rosa_chinensis	RchiOBHm_Chr3g0495141 RchiOBHm_Chr4g0398561
rosa_laevigata	RLG00000009344 RLG00000026064 RLG00000029692 RLG00000030599 RLG00000032695 RLG00000032696
rosa_multiflora	Rmu_co8139468.1_g000001 Rmu_co8270033.1_g000001 Rmu_co8275827.1_g000001 Rmu_sc0000185.1_g000029 Rmu_sc0000990.1_g000016 Rmu_sc0005217.1_g000007 Rmu_sc0005996.1_g000027 Rmu_sc0009001.1_g000015 Rmu_sc0013727.1_g000001 Rmu_sc0016350.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343530
rosa_rugosa	Rorug04G0009400
rosa_samantha	Rh1AG207300 Rh2AG231000 Rh2AG449700 Rh2CG436600 Rh2DG238800 Rh3DG271300 Rh4AG087300 Rh4BG083900 Rh4CG095500 Rh4DG078800 Rh4DG124400 Rh5DG085200 Rh6BG230400
rosa_wichuraiana	Rw1G018260 Rw1G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	776, 1243
AatII	GACGTC	1 cut(s)	807
Acc36I	ACCTGC	3 cut(s)	776, 1243, 1377
Acc65I	GGTACC	1 cut(s)	783
AccB1I	GGYRCC	1 cut(s)	783
AccBSI	CCGCTC	2 cut(s)	588, 775
AccI	GTMKAC	1 cut(s)	816
AccII	CGCG	9 cut(s)	276, 278, 392, 507, 633, 659, 722, 1271, 1495
AccIII	TCCGGA	1 cut(s)	542
AclWI	GGATC	2 cut(s)	797, 1173
AcoI	YGGCCR	4 cut(s)	419, 634, 1011, 1461
AcsI	RAATTY	1 cut(s)	1351
AcuI	CTGAAG	1 cut(s)	604
AcyI	GRCGYC	3 cut(s)	756, 804, 822
AfaI	GTAC	4 cut(s)	785, 1072, 1155, 1519
AfiI	CCNNNNNNNGG	6 cut(s)	326, 417, 688, 954, 1113, 1274
AflIII	ACRYGT	2 cut(s)	720, 1211
AgsI	TTSAA	4 cut(s)	199, 380, 1030, 1356
AjiI	CACGTC	2 cut(s)	730, 1214
AjnI	CCWGG	3 cut(s)	401, 1463, 1475
AluBI	AGCT	6 cut(s)	342, 832, 981, 1320, 1450, 1456
AluI	AGCT	6 cut(s)	342, 832, 981, 1320, 1450, 1456
Alw21I	GWGCWC	1 cut(s)	1086
Alw26I	GTCTC	2 cut(s)	704, 1104
AlwI	GGATC	2 cut(s)	797, 1173
Ama87I	CYCGRG	1 cut(s)	650
Aor13HI	TCCGGA	1 cut(s)	542
ApaI	GGGCCC	3 cut(s)	398, 1269, 1287
ApeKI	GCWGC	6 cut(s)	111, 290, 293, 296, 1225, 1249
ApoI	RAATTY	1 cut(s)	1351
Asp718I	GGTACC	1 cut(s)	783
AspLEI	GCGC	6 cut(s)	47, 278, 280, 507, 659, 1225
AsuC2I	CCSGG	6 cut(s)	321, 673, 881, 1108, 1125, 1287
AsuHPI	GGTGA	4 cut(s)	253, 354, 442, 1267
AsuII	TTCGAA	1 cut(s)	1394
AvaI	CYCGRG	1 cut(s)	650
AvaII	GGWCC	6 cut(s)	405, 545, 554, 624, 691, 1121
BaeGI	GKGCMC	3 cut(s)	398, 1269, 1287
BalI	TGGCCA	1 cut(s)	1463
BanI	GGYRCC	1 cut(s)	783
BanII	GRGCYC	5 cut(s)	398, 651, 1134, 1269, 1287
BbsI	GAAGAC	3 cut(s)	451, 463, 807
Bbv12I	GWGCWC	1 cut(s)	1086
BbvI	GCAGC	6 cut(s)	98, 302, 305, 308, 1237, 1261
BccI	CCATC	7 cut(s)	315, 361, 378, 599, 1040, 1137, 1292
BceAI	ACGGC	2 cut(s)	428, 1144
BciT130I	CCWGG	3 cut(s)	403, 1465, 1477
BclI	TGATCA	1 cut(s)	1191
BcnI	CCSGG	6 cut(s)	321, 673, 881, 1108, 1125, 1287
BcoDI	GTCTC	2 cut(s)	704, 1104
BfaI	CTAG	2 cut(s)	515, 1558
BfmI	CTRYAG	1 cut(s)	57
BfuAI	ACCTGC	3 cut(s)	776, 1243, 1377
Bme1390I	CCNGG	9 cut(s)	321, 403, 673, 881, 1108, 1125, 1287, 1465, 1477
Bme18I	GGWCC	6 cut(s)	405, 545, 554, 624, 691, 1121
BmeT110I	CYCGRG	1 cut(s)	650
BmgBI	CACGTC	2 cut(s)	730, 1214
BmrFI	CCNGG	9 cut(s)	321, 403, 673, 881, 1108, 1125, 1287, 1465, 1477
BmsI	GCATC	2 cut(s)	847, 1013
BpiI	GAAGAC	3 cut(s)	451, 463, 807
BpmI	CTGGAG	1 cut(s)	1118
Bpu10I	CCTNAGC	1 cut(s)	1382
Bpu14I	TTCGAA	1 cut(s)	1394
BpuEI	CTTGAG	1 cut(s)	1436
BpuMI	CCSGG	6 cut(s)	321, 673, 881, 1108, 1125, 1287
BsaAI	YACGTR	2 cut(s)	566, 747
BsaBI	GATNNNNATC	1 cut(s)	306
BsaHI	GRCGYC	3 cut(s)	756, 804, 822
BsaJI	CCNNGG	5 cut(s)	319, 687, 1269, 1404, 1476
BsaWI	WCCGGW	3 cut(s)	542, 551, 786
BsaXI	ACNNNNNCTCC	4 cut(s)	746, 776, 1309, 1339
Bsc4I	CCNNNNNNNGG	6 cut(s)	326, 417, 688, 954, 1113, 1274
Bse118I	RCCGGY	3 cut(s)	780, 1009, 1498
Bse1I	ACTGG	1 cut(s)	608
Bse3DI	GCAATG	2 cut(s)	333, 1420
Bse8I	GATNNNNATC	1 cut(s)	306
BseAI	TCCGGA	1 cut(s)	542
BseBI	CCWGG	3 cut(s)	403, 1465, 1477
BseDI	CCNNGG	5 cut(s)	319, 687, 1269, 1404, 1476
BseGI	GGATG	3 cut(s)	370, 838, 1028
BseJI	GATNNNNATC	1 cut(s)	306
BseLI	CCNNNNNNNGG	6 cut(s)	326, 417, 688, 954, 1113, 1274
BseMI	GCAATG	2 cut(s)	333, 1420
BseMII	CTCAG	1 cut(s)	1373
BseNI	ACTGG	1 cut(s)	608
BsePI	GCGCGC	1 cut(s)	276
BseSI	GKGCMC	3 cut(s)	398, 1269, 1287
BseX3I	CGGCCG	1 cut(s)	419
BseXI	GCAGC	6 cut(s)	98, 302, 305, 308, 1237, 1261
Bsh1236I	CGCG	9 cut(s)	276, 278, 392, 507, 633, 659, 722, 1271, 1495
Bsh1285I	CGRYCG	3 cut(s)	422, 1184, 1499
BshNI	GGYRCC	1 cut(s)	783
BsiEI	CGRYCG	3 cut(s)	422, 1184, 1499
BsiHKAI	GWGCWC	1 cut(s)	1086
BsiHKCI	CYCGRG	1 cut(s)	650
BslFI	GGGAC	4 cut(s)	586, 610, 948, 1107
BslI	CCNNNNNNNGG	6 cut(s)	326, 417, 688, 954, 1113, 1274
BsmAI	GTCTC	2 cut(s)	704, 1104
BsmBI	CGTCTC	1 cut(s)	704
BsmFI	GGGAC	4 cut(s)	586, 610, 948, 1107
BsoBI	CYCGRG	1 cut(s)	650
Bsp119I	TTCGAA	1 cut(s)	1394
Bsp120I	GGGCCC	3 cut(s)	394, 1265, 1283
Bsp1286I	GDGCHC	6 cut(s)	398, 651, 1086, 1134, 1269, 1287
Bsp13I	TCCGGA	1 cut(s)	542
Bsp143I	GATC	6 cut(s)	789, 867, 1089, 1165, 1191, 1310
Bsp68I	TCGCGA	1 cut(s)	1495
BspCNI	CTCAG	1 cut(s)	1374
BspEI	TCCGGA	1 cut(s)	542
BspFNI	CGCG	9 cut(s)	276, 278, 392, 507, 633, 659, 722, 1271, 1495
BspHI	TCATGA	1 cut(s)	1194
BspMI	ACCTGC	3 cut(s)	776, 1243, 1377
BspPI	GGATC	2 cut(s)	797, 1173
BspQI	GCTCTTC	1 cut(s)	995
BspT104I	TTCGAA	1 cut(s)	1394
BspT107I	GGYRCC	1 cut(s)	783
BsrBI	CCGCTC	2 cut(s)	588, 775
BsrDI	GCAATG	2 cut(s)	333, 1420
BsrFI	RCCGGY	3 cut(s)	780, 1009, 1498
BsrI	ACTGG	1 cut(s)	608
BssAI	RCCGGY	3 cut(s)	780, 1009, 1498
BssECI	CCNNGG	5 cut(s)	319, 687, 1269, 1404, 1476
BssHII	GCGCGC	1 cut(s)	276
BssMI	GATC	6 cut(s)	789, 867, 1089, 1165, 1191, 1310
BssNI	GRCGYC	3 cut(s)	756, 804, 822
Bst2UI	CCWGG	3 cut(s)	403, 1465, 1477
Bst4CI	ACNGT	4 cut(s)	457, 1018, 1070, 1182
Bst6I	CTCTTC	3 cut(s)	381, 995, 1232
BstACI	GRCGYC	3 cut(s)	756, 804, 822
BstBAI	YACGTR	2 cut(s)	566, 747
BstBI	TTCGAA	1 cut(s)	1394
BstDEI	CTNAG	2 cut(s)	811, 1382
BstDSI	CCRYGG	2 cut(s)	1269, 1404
BstF5I	GGATG	3 cut(s)	370, 838, 1028
BstFNI	CGCG	9 cut(s)	276, 278, 392, 507, 633, 659, 722, 1271, 1495
BstHHI	GCGC	6 cut(s)	47, 278, 280, 507, 659, 1225
BstKTI	GATC	6 cut(s)	792, 870, 1092, 1168, 1194, 1313
BstMAI	GTCTC	2 cut(s)	704, 1104
BstMBI	GATC	6 cut(s)	789, 867, 1089, 1165, 1191, 1310
BstMCI	CGRYCG	3 cut(s)	422, 1184, 1499
BstNI	CCWGG	3 cut(s)	403, 1465, 1477
BstSCI	CCNGG	9 cut(s)	319, 401, 671, 879, 1106, 1123, 1285, 1463, 1475
BstSFI	CTRYAG	1 cut(s)	57
BstSLI	GKGCMC	3 cut(s)	398, 1269, 1287
BstUI	CGCG	9 cut(s)	276, 278, 392, 507, 633, 659, 722, 1271, 1495
BstV1I	GCAGC	6 cut(s)	98, 302, 305, 308, 1237, 1261
BstV2I	GAAGAC	3 cut(s)	451, 463, 807
BstX2I	RGATCY	1 cut(s)	1165
BstXI	CCANNNNNNTGG	1 cut(s)	1471
BstYI	RGATCY	1 cut(s)	1165
BstZI	CGGCCG	1 cut(s)	419
BtgI	CCRYGG	2 cut(s)	1269, 1404
BtgZI	GCGATG	1 cut(s)	867
BtrI	CACGTC	2 cut(s)	730, 1214
BtsCI	GGATG	3 cut(s)	370, 838, 1028
BtsI	GCAGTG	2 cut(s)	496, 1536
BtsIMutI	CAGTG	3 cut(s)	496, 615, 1536
BtuMI	TCGCGA	1 cut(s)	1495
BveI	ACCTGC	3 cut(s)	776, 1243, 1377
CciI	TCATGA	1 cut(s)	1194
CfoI	GCGC	6 cut(s)	47, 278, 280, 507, 659, 1225
Cfr10I	RCCGGY	3 cut(s)	780, 1009, 1498
Cfr42I	CCGCGG	1 cut(s)	1272
CseI	GACGC	3 cut(s)	727, 764, 830
CsiI	ACCWGGT	1 cut(s)	401
Csp6I	GTAC	4 cut(s)	784, 1071, 1154, 1518
CspCI	CAANNNNNGTGG	2 cut(s)	490, 525
CviAII	CATG	3 cut(s)	1195, 1207, 1314
CviQI	GTAC	4 cut(s)	784, 1071, 1154, 1518
DdeI	CTNAG	2 cut(s)	811, 1382
DpnI	GATC	6 cut(s)	791, 869, 1091, 1167, 1193, 1312
DpnII	GATC	6 cut(s)	789, 867, 1089, 1165, 1191, 1310
EaeI	YGGCCR	4 cut(s)	419, 634, 1011, 1461
EagI	CGGCCG	1 cut(s)	419
Eam1104I	CTCTTC	3 cut(s)	381, 995, 1232
EarI	CTCTTC	3 cut(s)	381, 995, 1232
EciI	GGCGGA	1 cut(s)	91
EclXI	CGGCCG	1 cut(s)	419
Eco24I	GRGCYC	5 cut(s)	398, 651, 1134, 1269, 1287
Eco47I	GGWCC	6 cut(s)	405, 545, 554, 624, 691, 1121
Eco52I	CGGCCG	1 cut(s)	419
Eco57I	CTGAAG	1 cut(s)	604
Eco88I	CYCGRG	1 cut(s)	650
EcoO109I	RGGNCCY	6 cut(s)	395, 405, 624, 691, 1265, 1283
EcoRII	CCWGG	3 cut(s)	401, 1463, 1475
EcoT38I	GRGCYC	5 cut(s)	398, 651, 1134, 1269, 1287
Esp3I	CGTCTC	1 cut(s)	704
FaeI	CATG	3 cut(s)	1198, 1210, 1317
FaiI	YATR	6 cut(s)	128, 428, 434, 1196, 1208, 1315
FaqI	GGGAC	4 cut(s)	586, 610, 948, 1107
FatI	CATG	3 cut(s)	1194, 1206, 1313
FauI	CCCGC	9 cut(s)	128, 220, 385, 565, 780, 1212, 1255, 1276, 1331
FbaI	TGATCA	1 cut(s)	1191
FblI	GTMKAC	1 cut(s)	816
FokI	GGATG	3 cut(s)	357, 825, 1035
FriOI	GRGCYC	5 cut(s)	398, 651, 1134, 1269, 1287
FspBI	CTAG	2 cut(s)	515, 1558
GlaI	GCGC	6 cut(s)	46, 277, 279, 506, 658, 1224
GsuI	CTGGAG	1 cut(s)	1118
HgaI	GACGC	3 cut(s)	727, 764, 830
HhaI	GCGC	6 cut(s)	47, 278, 280, 507, 659, 1225
Hin1I	GRCGYC	3 cut(s)	756, 804, 822
Hin1II	CATG	3 cut(s)	1198, 1210, 1317
Hin6I	GCGC	6 cut(s)	45, 276, 278, 505, 657, 1223
HinP1I	GCGC	6 cut(s)	45, 276, 278, 505, 657, 1223
HincII	GTYRAC	2 cut(s)	349, 817
HindII	GTYRAC	2 cut(s)	349, 817
HindIII	AAGCTT	1 cut(s)	1454
HinfI	GANTC	6 cut(s)	14, 62, 87, 302, 599, 1050
HphI	GGTGA	4 cut(s)	253, 354, 442, 1267
Hpy166II	GTNNAC	2 cut(s)	349, 817
Hpy188I	TCNGA	7 cut(s)	843, 894, 966, 995, 1022, 1165, 1186
Hpy188III	TCNNGA	7 cut(s)	20, 543, 871, 1064, 1195, 1356, 1494
Hpy8I	GTNNAC	2 cut(s)	349, 817
HpyAV	CCTTC	2 cut(s)	229, 638
HpyCH4III	ACNGT	4 cut(s)	457, 1018, 1070, 1182
HpyCH4IV	ACGT	7 cut(s)	565, 729, 746, 804, 953, 1152, 1213
HpyCH4V	TGCA	3 cut(s)	501, 714, 838
HpyF3I	CTNAG	2 cut(s)	811, 1382
HpySE526I	ACGT	7 cut(s)	565, 729, 746, 804, 953, 1152, 1213
Hsp92I	GRCGYC	3 cut(s)	756, 804, 822
Hsp92II	CATG	3 cut(s)	1198, 1210, 1317
HspAI	GCGC	6 cut(s)	45, 276, 278, 505, 657, 1223
Kpn2I	TCCGGA	1 cut(s)	542
KpnI	GGTACC	1 cut(s)	787
KroI	GCCGGC	1 cut(s)	1009
KroNI	GCCGGC	1 cut(s)	1011
Ksp22I	TGATCA	1 cut(s)	1191
KspI	CCGCGG	1 cut(s)	1272
Kzo9I	GATC	6 cut(s)	789, 867, 1089, 1165, 1191, 1310
LguI	GCTCTTC	1 cut(s)	995
LmnI	GCTCC	8 cut(s)	593, 1081, 1137, 1146, 1317, 1341, 1513, 1546
Lsp1109I	GCAGC	6 cut(s)	98, 302, 305, 308, 1237, 1261
LweI	GCATC	2 cut(s)	847, 1013
MabI	ACCWGGT	1 cut(s)	401
MaeI	CTAG	2 cut(s)	515, 1558
MaeII	ACGT	7 cut(s)	565, 729, 746, 804, 953, 1152, 1213
MalI	GATC	6 cut(s)	791, 869, 1091, 1167, 1193, 1312
MbiI	CCGCTC	2 cut(s)	588, 775
MboI	GATC	6 cut(s)	789, 867, 1089, 1165, 1191, 1310
MflI	RGATCY	1 cut(s)	1165
MhlI	GDGCHC	6 cut(s)	398, 651, 1086, 1134, 1269, 1287
MlsI	TGGCCA	1 cut(s)	1463
MluCI	AATT	2 cut(s)	538, 1351
MluI	ACGCGT	1 cut(s)	720
MluNI	TGGCCA	1 cut(s)	1463
MlyI	GAGTC	3 cut(s)	56, 608, 1044
MmeI	TCCRAC	6 cut(s)	872, 1000, 1059, 1143, 1164, 1347
Mox20I	TGGCCA	1 cut(s)	1463
MroI	TCCGGA	1 cut(s)	542
MroNI	GCCGGC	1 cut(s)	1009
MscI	TGGCCA	1 cut(s)	1463
Msp20I	TGGCCA	1 cut(s)	1463
MspA1I	CMGCKG	3 cut(s)	981, 1219, 1271
MspR9I	CCNGG	9 cut(s)	321, 403, 673, 881, 1108, 1125, 1287, 1465, 1477
MvaI	CCWGG	3 cut(s)	403, 1465, 1477
MvnI	CGCG	9 cut(s)	276, 278, 392, 507, 633, 659, 722, 1271, 1495
NaeI	GCCGGC	1 cut(s)	1011
NciI	CCSGG	6 cut(s)	321, 673, 881, 1108, 1125, 1287
NdeII	GATC	6 cut(s)	789, 867, 1089, 1165, 1191, 1310
NgoMIV	GCCGGC	1 cut(s)	1009
NlaIII	CATG	3 cut(s)	1198, 1210, 1317
NmeAIII	GCCGAG	1 cut(s)	447
NruI	TCGCGA	1 cut(s)	1495
NspV	TTCGAA	1 cut(s)	1394
PaeR7I	CTCGAG	1 cut(s)	650
PagI	TCATGA	1 cut(s)	1194
PaqCI	CACCTGC	2 cut(s)	776, 1243
PauI	GCGCGC	1 cut(s)	276
PciSI	GCTCTTC	1 cut(s)	995
PcsI	WCGNNNNNNNCGW	6 cut(s)	684, 726, 735, 738, 1499, 1513
PdiI	GCCGGC	1 cut(s)	1011
PfeI	GAWTC	3 cut(s)	14, 87, 302
PleI	GAGTC	3 cut(s)	56, 607, 1044
PpsI	GAGTC	3 cut(s)	56, 607, 1044
Ppu21I	YACGTR	2 cut(s)	566, 747
PpuMI	RGGWCCY	3 cut(s)	405, 624, 691
Psp5II	RGGWCCY	3 cut(s)	405, 624, 691
Psp6I	CCWGG	3 cut(s)	401, 1463, 1475
PspGI	CCWGG	3 cut(s)	401, 1463, 1475
PspOMI	GGGCCC	3 cut(s)	394, 1265, 1283
PspPPI	RGGWCCY	3 cut(s)	405, 624, 691
PspXI	VCTCGAGB	1 cut(s)	650
PsuI	RGATCY	1 cut(s)	1165
PteI	GCGCGC	1 cut(s)	276
PvuII	CAGCTG	1 cut(s)	981
RruI	TCGCGA	1 cut(s)	1495
RsaI	GTAC	4 cut(s)	785, 1072, 1155, 1519
RsaNI	GTAC	4 cut(s)	784, 1071, 1154, 1518
SacII	CCGCGG	1 cut(s)	1272
SalI	GTCGAC	1 cut(s)	815
SapI	GCTCTTC	1 cut(s)	995
Sau3AI	GATC	6 cut(s)	789, 867, 1089, 1165, 1191, 1310
SchI	GAGTC	3 cut(s)	56, 608, 1044
ScrFI	CCNGG	9 cut(s)	321, 403, 673, 881, 1108, 1125, 1287, 1465, 1477
SduI	GDGCHC	6 cut(s)	398, 651, 1086, 1134, 1269, 1287
SexAI	ACCWGGT	1 cut(s)	401
SfaNI	GCATC	2 cut(s)	847, 1013
SfcI	CTRYAG	1 cut(s)	57
Sfr274I	CTCGAG	1 cut(s)	650
Sfr303I	CCGCGG	1 cut(s)	1272
SfuI	TTCGAA	1 cut(s)	1394
SgrBI	CCGCGG	1 cut(s)	1272
SinI	GGWCC	6 cut(s)	405, 545, 554, 624, 691, 1121
SlaI	CTCGAG	1 cut(s)	650
SmlI	CTYRAG	3 cut(s)	18, 650, 1451
SmoI	CTYRAG	3 cut(s)	18, 650, 1451
Sse9I	AATT	2 cut(s)	538, 1351
SspMI	CTAG	2 cut(s)	515, 1558
StyD4I	CCNGG	9 cut(s)	319, 401, 671, 879, 1106, 1123, 1285, 1463, 1475
TaaI	ACNGT	4 cut(s)	457, 1018, 1070, 1182
TaiI	ACGT	7 cut(s)	568, 732, 749, 807, 956, 1155, 1216
TasI	AATT	2 cut(s)	538, 1351
TauI	GCSGC	7 cut(s)	82, 636, 827, 907, 1274, 1335, 1338
TfiI	GAWTC	3 cut(s)	14, 87, 302
TscAI	CASTG	3 cut(s)	503, 615, 1543
TseI	GCWGC	6 cut(s)	111, 290, 293, 296, 1225, 1249
TspDTI	ATGAA	1 cut(s)	1013
TspGWI	ACGGA	4 cut(s)	454, 686, 1522, 1526
TspRI	CASTG	3 cut(s)	503, 615, 1543
VpaK11BI	GGWCC	6 cut(s)	405, 545, 554, 624, 691, 1121
XapI	RAATTY	1 cut(s)	1351
XhoI	CTCGAG	1 cut(s)	650
XmiI	GTMKAC	1 cut(s)	816
XspI	CTAG	2 cut(s)	515, 1558
ZraI	GACGTC	1 cut(s)	805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.