Rroxscaffold_5G00343530

RING-H2 finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0002352
Physical Location & Seq
Reverse (-)
13049562 .. 13052136
2575 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00343530.1

Sequence Viewer

Length: 1422 bp
ATGGGCTGCCTTCTCTTTCTCTCTCTCAAGCCCACCACCACCGCCGCCGCCGCCTTCTTCGTTCTTCTAATCACCCTCCTCTCTTTTCTCTCTACACCCTCCAATGCCGACCCCGACCCCGACCCGAAAATCGGCGACATTGCCACAACGTCTGCTTCACCGCCGCCACCTGTACTTAATGTGGACACCGCCGAGAAACCCAAGTCGTTCCGGCCCAGCATGGCCATCATGGTCGGAGTTCTGACGACTCTGTTCTCCTTCACGTTTCTTCTCCTCCTCTACGCCAAGCACTGCAAGCGCGGCACCTTCGTCGTCATCGGAGGAACCGCCGACTCGGGACCCCCCGGCGGGGCGGGTCTCCGTAAAAACTCCGGAATCGACCGGGCCGTCGTCGAGTCCCTCCCGGTTTTCCGGTTCAGGTCGCTCCGGGGACACAAGGACGGCCTCGAATGCGCCGTCTGCCTCACCCGGTTCGAGCCCACCGAGGTCCTCCGCCTCCTCCCGAAATGCAAGCACGCCTTCCACGTCGAGTGCGTCGACACGTGGCTCGACGCCCACTCCACCTGCCCGCTCTGCCGCTACCGGGTCGACCCGGAAGACATCCTCCTAATCGAAGACGCCAGAATCCTGCACCACCAGAACAGCCAGCCCCAGACTCCCCACCAAAACGACGTCGTCATCAACATCGAAACCGACCCGGGAATCCGCCGCGTCTCGGGGCGCCACTCCTCCGCCTTGGAGCAGCGACCCGGCTCCTCCTCTCACGACAATACGTCGTCGTTCCGGAGGTCCCTCGACAGCTGGACCTGGTTCCGGAAAAAAACCGAACCCGCCGCCGCCGGCGGAAGCCAAGAACGTCCGAGAAAAGACGGCCTTCTTTTAAGCCACGACAAAACGAGGCTGGAGCACAGAATCATCGTCTCCTCCCCCAGATCAAGCAACACCGGCGGCTGTGGGTTCCACCAACGATGGAGCGACGTACAGCCGTCCGATCTTCTCTACCTTCGCTCGGAGATGATCATGAGCGATAACGGACTGACACGTCAGGGGCAGGAGCAGCAGGAGGTACCGTTGCGCTGTGGGAATGGGGCCGTTCCAGCTGGGGAGAGTAATGGAGGGAGTGGCAGTGGCAGTGGCAGTGGCAGAGGCGTAATAAACGAGCGAAGCGTGTCGGAAATCACGGGGTTGAGCAGGTTTTCGAACAGAGGGAGCAGTAACGAGAGGAGCAATCAGCAGCGCCAAAACCAAAACCATCAGCAGTGTTACCAACAGCGACAGCTCAGGCTCGTGTCCAGGTGGGTCGCTTGGATTTCGTCCCAGTCACGCCCAGCTGTACGGTCCGATCGTACTACTGGTGCGTCTTCCCCCACCACTCCACCTCCACCACCACCACCGCCTTTACCCACTGTGGCCACTGCTTGA

Protein Analysis

473

Amino Acids

51.65

Weight (kDa)

9.27

Isoelectric Point (pI)

57.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 150 - 193 2e-13 Ring finger domain
zf-RING_11 PF17123 150 - 179 1.1e-09 RING-like zinc finger
zf-C3HC4_2 PF13923 150 - 192 4.1e-08 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 151 - 192 2.3e-06 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 163 - 193 5.5e-08 RING-H2 zinc finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 572
AasI GACNNNNNNGTC 2 cut(s) 386, 1041
AatII GACGTC 1 cut(s) 675
Acc36I ACCTGC 2 cut(s) 572, 1182
Acc65I GGTACC 1 cut(s) 1066
AccB1I GGYRCC 3 cut(s) 302, 720, 1066
AccBSI CCGCTC 1 cut(s) 571
AccI GTMKAC 2 cut(s) 537, 588
AccII CGCG 2 cut(s) 300, 711
AccIII TCCGGA 3 cut(s) 371, 783, 813
AcoI YGGCCR 2 cut(s) 222, 1410
AcvI CACGTG 1 cut(s) 543
AcyI GRCGYC 4 cut(s) 552, 618, 672, 721
AfaI GTAC 5 cut(s) 174, 981, 1068, 1335, 1348
AfiI CCNNNNNNNGG 8 cut(s) 131, 347, 348, 349, 583, 715, 813, 1009
AflIII ACRYGT 2 cut(s) 540, 1040
AhdI GACNNNNNGTC 1 cut(s) 772
AjiI CACGTC 2 cut(s) 526, 1043
AjnI CCWGG 2 cut(s) 806, 1292
AluBI AGCT 4 cut(s) 801, 1100, 1279, 1331
AluI AGCT 4 cut(s) 801, 1100, 1279, 1331
Alw21I GWGCWC 1 cut(s) 909
Alw26I GTCTC 3 cut(s) 362, 718, 925
Ama87I CYCGRG 3 cut(s) 334, 697, 715
Aor13HI TCCGGA 3 cut(s) 371, 783, 813
AoxI GGCC 7 cut(s) 212, 222, 384, 442, 871, 1089, 1410
ApeKI GCWGC 4 cut(s) 6, 742, 1057, 1234
ArsI GACNNNNNNTTYG 2 cut(s) 441, 473
Asp718I GGTACC 1 cut(s) 1066
AspLEI GCGC 5 cut(s) 300, 455, 723, 1077, 1239
AspS9I GGNCC 8 cut(s) 213, 338, 384, 487, 789, 804, 1089, 1338
AsuHPI GGTGA 3 cut(s) 64, 150, 457
AsuII TTCGAA 1 cut(s) 1199
AvaI CYCGRG 3 cut(s) 334, 697, 715
AvaII GGWCC 5 cut(s) 338, 487, 789, 804, 1338
BalI TGGCCA 2 cut(s) 224, 1412
BanI GGYRCC 3 cut(s) 302, 720, 1066
BanII GRGCYC 1 cut(s) 480
BauI CACGAG 1 cut(s) 1286
BbrPI CACGTG 1 cut(s) 543
BbsI GAAGAC 3 cut(s) 603, 621, 1353
Bbv12I GWGCWC 1 cut(s) 909
BbvI GCAGC 3 cut(s) 754, 1069, 1246
BccI CCATC 3 cut(s) 233, 963, 1260
BceAI ACGGC 6 cut(s) 371, 440, 457, 886, 970, 1076
BcgI CGANNNNNNTGC 2 cut(s) 292, 326
BciT130I CCWGG 2 cut(s) 808, 1294
BclI TGATCA 1 cut(s) 1017
BcoDI GTCTC 3 cut(s) 362, 718, 925
BfoI RGCGCY 2 cut(s) 724, 1240
BfuAI ACCTGC 2 cut(s) 572, 1182
Bme18I GGWCC 5 cut(s) 338, 487, 789, 804, 1338
BmeRI GACNNNNNGTC 1 cut(s) 772
BmeT110I CYCGRG 3 cut(s) 334, 697, 715
BmgBI CACGTC 2 cut(s) 526, 1043
BmgT120I GGNCC 8 cut(s) 213, 338, 384, 487, 789, 804, 1089, 1338
BmrI ACTGGG 1 cut(s) 1312
BmuI ACTGGG 1 cut(s) 1312
BpiI GAAGAC 3 cut(s) 603, 621, 1353
BpmI CTGGAG 1 cut(s) 923
Bpu10I CCTNAGC 1 cut(s) 1280
Bpu14I TTCGAA 1 cut(s) 1199
BpuEI CTTGAG 1 cut(s) 11
BsaAI YACGTR 1 cut(s) 543
BsaHI GRCGYC 4 cut(s) 552, 618, 672, 721
BsaI GGTCTC 1 cut(s) 362
BsaJI CCNNGG 5 cut(s) 343, 427, 483, 697, 735
BsaWI WCCGGW 4 cut(s) 371, 411, 783, 813
BsaXI ACNNNNNCTCC 8 cut(s) 542, 572, 1055, 1085, 1111, 1141, 1363, 1393
Bsc4I CCNNNNNNNGG 8 cut(s) 131, 347, 348, 349, 583, 715, 813, 1009
Bse118I RCCGGY 2 cut(s) 839, 944
Bse1I ACTGG 2 cut(s) 1318, 1357
Bse3DI GCAATG 1 cut(s) 138
BseAI TCCGGA 3 cut(s) 371, 783, 813
BseBI CCWGG 2 cut(s) 808, 1294
BseDI CCNNGG 5 cut(s) 343, 427, 483, 697, 735
BseGI GGATG 1 cut(s) 600
BseLI CCNNNNNNNGG 8 cut(s) 131, 347, 348, 349, 583, 715, 813, 1009
BseMI GCAATG 1 cut(s) 138
BseMII CTCAG 1 cut(s) 1294
BseNI ACTGG 2 cut(s) 1318, 1357
BseRI GAGGAG 9 cut(s) 68, 263, 266, 488, 718, 745, 748, 913, 1237
BseXI GCAGC 3 cut(s) 754, 1069, 1246
BseYI CCCAGC 3 cut(s) 215, 1100, 1327
BsgI GTGCAG 1 cut(s) 614
Bsh1236I CGCG 2 cut(s) 300, 711
Bsh1285I CGRYCG 2 cut(s) 382, 1345
BshFI GGCC 7 cut(s) 214, 224, 386, 444, 873, 1091, 1412
BshNI GGYRCC 3 cut(s) 302, 720, 1066
BsiEI CGRYCG 2 cut(s) 382, 1345
BsiHKAI GWGCWC 1 cut(s) 909
BsiHKCI CYCGRG 3 cut(s) 334, 697, 715
BslFI GGGAC 5 cut(s) 351, 382, 444, 775, 1300
BslI CCNNNNNNNGG 8 cut(s) 131, 347, 348, 349, 583, 715, 813, 1009
BsmAI GTCTC 3 cut(s) 362, 718, 925
BsmBI CGTCTC 2 cut(s) 718, 925
BsmFI GGGAC 5 cut(s) 351, 382, 444, 775, 1300
BsmI GAATGC 1 cut(s) 455
BsnI GGCC 7 cut(s) 214, 224, 386, 444, 873, 1091, 1412
Bso31I GGTCTC 1 cut(s) 362
BsoBI CYCGRG 3 cut(s) 334, 697, 715
Bsp119I TTCGAA 1 cut(s) 1199
Bsp1286I GDGCHC 2 cut(s) 480, 909
Bsp13I TCCGGA 3 cut(s) 371, 783, 813
Bsp143I GATC 4 cut(s) 932, 991, 1017, 1342
BspANI GGCC 7 cut(s) 214, 224, 386, 444, 873, 1091, 1412
BspCNI CTCAG 1 cut(s) 1293
BspEI TCCGGA 3 cut(s) 371, 783, 813
BspFNI CGCG 2 cut(s) 300, 711
BspHI TCATGA 1 cut(s) 1020
BspMI ACCTGC 2 cut(s) 572, 1182
BspT104I TTCGAA 1 cut(s) 1199
BspT107I GGYRCC 3 cut(s) 302, 720, 1066
BspTNI GGTCTC 1 cut(s) 362
BsrBI CCGCTC 1 cut(s) 571
BsrDI GCAATG 1 cut(s) 138
BsrFI RCCGGY 2 cut(s) 839, 944
BsrI ACTGG 2 cut(s) 1318, 1357
BssAI RCCGGY 2 cut(s) 839, 944
BssECI CCNNGG 5 cut(s) 343, 427, 483, 697, 735
BssMI GATC 4 cut(s) 932, 991, 1017, 1342
BssNI GRCGYC 4 cut(s) 552, 618, 672, 721
BssSI CACGAG 1 cut(s) 1286
BssT1I CCWWGG 1 cut(s) 735
Bst2BI CACGAG 1 cut(s) 1286
Bst2UI CCWGG 2 cut(s) 808, 1294
Bst4CI ACNGT 3 cut(s) 1071, 1338, 1408
BstACI GRCGYC 4 cut(s) 552, 618, 672, 721
BstBAI YACGTR 1 cut(s) 543
BstBI TTCGAA 1 cut(s) 1199
BstC8I GCNNGC 6 cut(s) 296, 512, 516, 569, 647, 841
BstDEI CTNAG 1 cut(s) 1280
BstF5I GGATG 1 cut(s) 600
BstFNI CGCG 2 cut(s) 300, 711
BstH2I RGCGCY 2 cut(s) 724, 1240
BstHHI GCGC 5 cut(s) 300, 455, 723, 1077, 1239
BstKTI GATC 4 cut(s) 935, 994, 1020, 1345
BstMAI GTCTC 3 cut(s) 362, 718, 925
BstMBI GATC 4 cut(s) 932, 991, 1017, 1342
BstMCI CGRYCG 2 cut(s) 382, 1345
BstMWI GCNNNNNNNGC 9 cut(s) 50, 295, 300, 450, 459, 573, 945, 1057, 1097
BstNI CCWGG 2 cut(s) 808, 1294
BstUI CGCG 2 cut(s) 300, 711
BstV1I GCAGC 3 cut(s) 754, 1069, 1246
BstV2I GAAGAC 3 cut(s) 603, 621, 1353
BsuRI GGCC 7 cut(s) 214, 224, 386, 444, 873, 1091, 1412
BtrI CACGTC 2 cut(s) 526, 1043
BtsCI GGATG 1 cut(s) 600
BtsI GCAGTG 6 cut(s) 289, 1132, 1138, 1144, 1265, 1413
BtsIMutI CAGTG 7 cut(s) 289, 1132, 1138, 1144, 1265, 1404, 1413
BveI ACCTGC 2 cut(s) 572, 1182
Cac8I GCNNGC 6 cut(s) 296, 512, 516, 569, 647, 841
CciI TCATGA 1 cut(s) 1020
CfoI GCGC 5 cut(s) 300, 455, 723, 1077, 1239
Cfr10I RCCGGY 2 cut(s) 839, 944
Cfr13I GGNCC 8 cut(s) 213, 338, 384, 487, 789, 804, 1089, 1338
Cfr9I CCCGGG 1 cut(s) 697
CpoI CGGWCCG 1 cut(s) 1338
CseI GACGC 5 cut(s) 523, 560, 626, 700, 1347
CsiI ACCWGGT 1 cut(s) 806
Csp6I GTAC 5 cut(s) 173, 980, 1067, 1334, 1347
CspI CGGWCCG 1 cut(s) 1338
CviAII CATG 3 cut(s) 220, 229, 1021
CviQI GTAC 5 cut(s) 173, 980, 1067, 1334, 1347
DdeI CTNAG 1 cut(s) 1280
DinI GGCGCC 1 cut(s) 722
DpnI GATC 4 cut(s) 934, 993, 1019, 1344
DpnII GATC 4 cut(s) 932, 991, 1017, 1342
DrdI GACNNNNNNGTC 2 cut(s) 386, 1041
DriI GACNNNNNGTC 1 cut(s) 772
DseDI GACNNNNNNGTC 2 cut(s) 386, 1041
EaeI YGGCCR 2 cut(s) 222, 1410
Eam1105I GACNNNNNGTC 1 cut(s) 772
EciI GGCGGA 4 cut(s) 482, 695, 721, 858
Eco130I CCWWGG 1 cut(s) 735
Eco24I GRGCYC 1 cut(s) 480
Eco31I GGTCTC 1 cut(s) 362
Eco47I GGWCC 5 cut(s) 338, 487, 789, 804, 1338
Eco72I CACGTG 1 cut(s) 543
Eco88I CYCGRG 3 cut(s) 334, 697, 715
EcoO109I RGGNCCY 3 cut(s) 338, 487, 789
EcoRII CCWGG 2 cut(s) 806, 1292
EcoT14I CCWWGG 1 cut(s) 735
EcoT38I GRGCYC 1 cut(s) 480
EgeI GGCGCC 1 cut(s) 722
EheI GGCGCC 1 cut(s) 722
ErhI CCWWGG 1 cut(s) 735
Esp3I CGTCTC 2 cut(s) 718, 925
FaeI CATG 3 cut(s) 223, 232, 1024
FaiI YATR 3 cut(s) 221, 230, 1022
FalI AAGNNNNNCTT 4 cut(s) 503, 535, 858, 890
FaqI GGGAC 5 cut(s) 351, 382, 444, 775, 1300
FatI CATG 3 cut(s) 219, 228, 1020
FauI CCCGC 4 cut(s) 341, 346, 576, 838
FbaI TGATCA 1 cut(s) 1017
FblI GTMKAC 2 cut(s) 537, 588
FokI GGATG 1 cut(s) 587
FriOI GRGCYC 1 cut(s) 480
GlaI GCGC 5 cut(s) 299, 454, 722, 1076, 1238
GsaI CCCAGC 3 cut(s) 219, 1104, 1331
GsuI CTGGAG 1 cut(s) 923
HaeII RGCGCY 2 cut(s) 724, 1240
HaeIII GGCC 7 cut(s) 214, 224, 386, 444, 873, 1091, 1412
HgaI GACGC 5 cut(s) 523, 560, 626, 700, 1347
HhaI GCGC 5 cut(s) 300, 455, 723, 1077, 1239
Hin1I GRCGYC 4 cut(s) 552, 618, 672, 721
Hin1II CATG 3 cut(s) 223, 232, 1024
Hin6I GCGC 5 cut(s) 298, 453, 721, 1075, 1237
HinP1I GCGC 5 cut(s) 298, 453, 721, 1075, 1237
HincII GTYRAC 2 cut(s) 538, 589
HindII GTYRAC 2 cut(s) 538, 589
HinfI GANTC 8 cut(s) 247, 332, 375, 395, 624, 655, 702, 912
HphI GGTGA 3 cut(s) 64, 150, 457
Hpy166II GTNNAC 3 cut(s) 184, 538, 589
Hpy188I TCNGA 8 cut(s) 236, 243, 320, 861, 991, 1012, 1174, 1342
Hpy188III TCNNGA 7 cut(s) 336, 372, 502, 764, 784, 814, 1021
Hpy8I GTNNAC 3 cut(s) 184, 538, 589
HpyAV CCTTC 7 cut(s) 20, 64, 268, 316, 529, 884, 1013
HpyCH4III ACNGT 3 cut(s) 1071, 1338, 1408
HpyCH4IV ACGT 9 cut(s) 149, 263, 525, 542, 672, 773, 856, 978, 1042
HpyCH4V TGCA 3 cut(s) 294, 510, 631
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 295, 300, 450, 459, 573, 945, 1057, 1097
HpyF3I CTNAG 1 cut(s) 1280
HpySE526I ACGT 9 cut(s) 149, 263, 525, 542, 672, 773, 856, 978, 1042
Hsp92I GRCGYC 4 cut(s) 552, 618, 672, 721
Hsp92II CATG 3 cut(s) 223, 232, 1024
HspAI GCGC 5 cut(s) 298, 453, 721, 1075, 1237
KasI GGCGCC 1 cut(s) 720
KflI GGGWCCC 1 cut(s) 338
Kpn2I TCCGGA 3 cut(s) 371, 783, 813
KpnI GGTACC 1 cut(s) 1070
KroI GCCGGC 1 cut(s) 839
KroNI GCCGGC 1 cut(s) 841
Ksp22I TGATCA 1 cut(s) 1017
Kzo9I GATC 4 cut(s) 932, 991, 1017, 1342
LmnI GCTCC 8 cut(s) 429, 739, 758, 904, 972, 1054, 1209, 1224
Lsp1109I GCAGC 3 cut(s) 754, 1069, 1246
MabI ACCWGGT 1 cut(s) 806
MaeII ACGT 9 cut(s) 149, 263, 525, 542, 672, 773, 856, 978, 1042
MaeIII GTNAC 3 cut(s) 1214, 1262, 1320
MalI GATC 4 cut(s) 934, 993, 1019, 1344
MbiI CCGCTC 1 cut(s) 571
MboI GATC 4 cut(s) 932, 991, 1017, 1342
MboII GAAGA 7 cut(s) 49, 56, 260, 608, 626, 986, 1353
MhlI GDGCHC 2 cut(s) 480, 909
MlsI TGGCCA 2 cut(s) 224, 1412
MluNI TGGCCA 2 cut(s) 224, 1412
Mly113I GGCGCC 1 cut(s) 721
MlyI GAGTC 4 cut(s) 241, 326, 404, 649
MmeI TCCRAC 2 cut(s) 214, 1152
Mox20I TGGCCA 2 cut(s) 224, 1412
MreI CGCCGGCG 1 cut(s) 839
MroI TCCGGA 3 cut(s) 371, 783, 813
MroNI GCCGGC 1 cut(s) 839
MscI TGGCCA 2 cut(s) 224, 1412
MseI TTAA 2 cut(s) 177, 881
Msp20I TGGCCA 2 cut(s) 224, 1412
MspA1I CMGCKG 3 cut(s) 801, 1100, 1331
Mva1269I GAATGC 1 cut(s) 455
MvaI CCWGG 2 cut(s) 808, 1294
MvnI CGCG 2 cut(s) 300, 711
MwoI GCNNNNNNNGC 9 cut(s) 50, 295, 300, 450, 459, 573, 945, 1057, 1097
NaeI GCCGGC 1 cut(s) 841
NarI GGCGCC 1 cut(s) 721
NdeII GATC 4 cut(s) 932, 991, 1017, 1342
NgoMIV GCCGGC 1 cut(s) 839
NlaIII CATG 3 cut(s) 223, 232, 1024
NmeAIII GCCGAG 1 cut(s) 217
NmuCI GTSAC 1 cut(s) 1320
NspV TTCGAA 1 cut(s) 1199
PagI TCATGA 1 cut(s) 1020
PaqCI CACCTGC 1 cut(s) 572
PcsI WCGNNNNNNNCGW 8 cut(s) 384, 453, 480, 522, 531, 534, 1164, 1342
PctI GAATGC 1 cut(s) 455
PdiI GCCGGC 1 cut(s) 841
PfeI GAWTC 4 cut(s) 375, 624, 702, 912
PflFI GACNNNGTC 1 cut(s) 674
Ple19I CGATCG 1 cut(s) 1345
PleI GAGTC 4 cut(s) 241, 326, 403, 649
PluTI GGCGCC 1 cut(s) 724
PmaCI CACGTG 1 cut(s) 543
PmlI CACGTG 1 cut(s) 543
PpsI GAGTC 4 cut(s) 241, 326, 403, 649
Ppu21I YACGTR 1 cut(s) 543
PpuMI RGGWCCY 3 cut(s) 338, 487, 789
Psp5II RGGWCCY 3 cut(s) 338, 487, 789
Psp6I CCWGG 2 cut(s) 806, 1292
PspCI CACGTG 1 cut(s) 543
PspFI CCCAGC 3 cut(s) 215, 1100, 1327
PspGI CCWGG 2 cut(s) 806, 1292
PspPI GGNCC 8 cut(s) 213, 338, 384, 487, 789, 804, 1089, 1338
PspPPI RGGWCCY 3 cut(s) 338, 487, 789
PsyI GACNNNGTC 1 cut(s) 674
PvuI CGATCG 1 cut(s) 1345
PvuII CAGCTG 3 cut(s) 801, 1100, 1331
RsaI GTAC 5 cut(s) 174, 981, 1068, 1335, 1348
RsaNI GTAC 5 cut(s) 173, 980, 1067, 1334, 1347
Rsr2I CGGWCCG 1 cut(s) 1338
RsrII CGGWCCG 1 cut(s) 1338
SalI GTCGAC 2 cut(s) 536, 587
SaqAI TTAA 2 cut(s) 177, 881
Sau3AI GATC 4 cut(s) 932, 991, 1017, 1342
Sau96I GGNCC 8 cut(s) 213, 338, 384, 487, 789, 804, 1089, 1338
SchI GAGTC 4 cut(s) 241, 326, 404, 649
SduI GDGCHC 2 cut(s) 480, 909
SexAI ACCWGGT 1 cut(s) 806
SfoI GGCGCC 1 cut(s) 722
SfuI TTCGAA 1 cut(s) 1199
SgrAI CRCCGGYG 2 cut(s) 839, 944
SinI GGWCC 5 cut(s) 338, 487, 789, 804, 1338
SmaI CCCGGG 1 cut(s) 699
SmlI CTYRAG 1 cut(s) 26
SmoI CTYRAG 1 cut(s) 26
SspDI GGCGCC 1 cut(s) 720
StyI CCWWGG 1 cut(s) 735
TaaI ACNGT 3 cut(s) 1071, 1338, 1408
TaiI ACGT 9 cut(s) 152, 266, 528, 545, 675, 776, 859, 981, 1045
TatI WGTACW 1 cut(s) 172
TfiI GAWTC 4 cut(s) 375, 624, 702, 912
Tru1I TTAA 2 cut(s) 177, 881
Tru9I TTAA 2 cut(s) 177, 881
TscAI CASTG 7 cut(s) 296, 1132, 1138, 1144, 1265, 1411, 1420
TseFI GTSAC 1 cut(s) 1320
TseI GCWGC 4 cut(s) 6, 742, 1057, 1234
Tsp45I GTSAC 1 cut(s) 1320
TspGWI ACGGA 2 cut(s) 350, 1047
TspMI CCCGGG 1 cut(s) 697
TspRI CASTG 7 cut(s) 296, 1132, 1138, 1144, 1265, 1411, 1420
Tth111I GACNNNGTC 1 cut(s) 674
VpaK11BI GGWCC 5 cut(s) 338, 487, 789, 804, 1338
XmaI CCCGGG 1 cut(s) 697
XmiI GTMKAC 2 cut(s) 537, 588
ZraI GACGTC 1 cut(s) 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.