Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002490

Physical Location & Seq

Genomic Coordinates Reverse (-)

9728816 .. 9735519

Gene Structure 6704 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g17070.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGTCTCCGCTCGCCGAGAACGACGAGATTCCTTACTACGATGACGACGACGACGACGAATACGACGACGGCTTCAACGACGACATTGAGGCCCTCCGCCGCGCCTGTATGATCACCGGCCAAGACCCCGACGACGTCATCGCCAAAAACGACCAAGGAAAAAACCCTAGCATCCACCAAAACGACGACGACGACATAGACGTAGGCCCCTCCTCCGCTCCCAATTCCGACTCCGACTCCGATTTCGACGAGGACCTCGAGCTGCTCCGCAAAATCAAGAACCAATTCTCCGATAACAAGCCTCTTTCGCTGAAGCCTCTCTGTACTTTGCTGCCGCCTTCCGTCTCCGACGAGGAGGAGGACGACTACCAAACGCTACTCGCCGTGAGGAAACGTTTCGCTGCTTACGAGAACGTGCAGATTGATCCTCCCTGCAAATCAGTCCAGGAAACTTGCAATGAAGTATCTGGAAGTGAGGCTCATGAAAGGTTTCCGTATCTGGTCACCTATACTGAAGAGGGGAAGCCTTCCACTTCCATTGAGTGGAATCAGTCAGATTCTTGTAAGCCATCTATGTCGCCAACCAAAAGTTCAGGATTCCCAAAGTCTGCACTGGCTTTTTGGGATGCTATTATTAAGAATAGGTCCTGTCAGAAGTTTCTTGGAAGTAAGCTAATACAAATCAAAGCTAAAATTGAGGAGAACAACAAACTGAAGCAGCGTGTCAAAATCCTTAGAGACTTTCAAGCTCATTGCAAAAGACGAACAGGAGAAGCGCTGTCTCAAAAGAAGGATCCCTGTGTCCAGTTAATTTTAACGAAAAGGCCAAGGGTTGATTCAAAGGCACATGACAGAGCTATCTCAGCTTTGTCCTATGGCCCAGAAGAAAATTCACATGTTGCTGACTACAGAAAGGCATTGACAAAATTTCCAGTTTCATTAGATCGAAAAAATTGGTCAGAGGCAGAAAAGAAAGATCTTCAAAAGGGAATAAGACAGCAATTTCAAGAAATGGTTCTTCAATCTTCCATGGATGAATCAAGTTATTCTGAGACGCGTCATGGAGACTCAGATGCCATTGATAACATTTTGGCTTCAATCAAGGATCTCGAAATTACCCCATACAGCATTAAGGAGTTCCTGCCTAAGGTTAACTGGGAGCAGTTGGCTTCCATGTATGTTCCTGGTCGCTCTGGTGGAGAATGTGAAGCAAGGTGGTTGAACTGGGAGGATCCCTTAGTCAATCACGGACCATGGACTACGGATGAGGATAAGATGATTCTGTATCTTGTCCAGAAGAATGGGGTCAATGATTGGATTAATATTGCAGAAGCGGTTGGGACTAACAGGACTCCATTTCAGTGCTTGGCACGCTACCAAAGGAGCCTAAATGCTTCTATTCTGAAACGGGAGTGGACCAAGGATGAGGATGCACAACTTTCTTCTGCTGTAGAGGCTTTTGGTGAGAGGGATTGGCAGTCTGTAGCTTCTGCTTTGAATGGACGAACTGGTACTCAATGCTCTAACAGATGGAAGAAATCACTTCATCCAACCAGAACAAGAGCTGGTAAATGGACTCCAGAGGAAGACAAACGCCTGATTGTAGCTCAAATGCTTTTTGGGTCAAAAAATTGGAACAAGACAGCTCAATTTGTGCCGGGTCGAACTCAGGCACAATGCAGGGATAGATATGTCAACTCTTTAGAACCTTCTTTGAAGTGGTGTGAATGGACTGAAGAAGAGGATTCAAGATTGATTAAGGCAATTGAAGAATGTGGACATTGCTGGTCAAAAGTTGCTGCATATGTGCCTAACCGGACTGATAATATGTGCTGGAGGAGATGGAAGGTATTGTTTCCGGATGAAGTGCCTTTGCTCAGAGAAGAGAAAAAAATACGTAAGACCGCTCTCATCCGCAACTTTGTTGATCGGGAGAAAGAACGCCCAGCCCTTGGCCCTAATGATTTTCTTCTACAAGACGGTACCTCAAGGAAGAGTTTAACTAGGAAGACAGGAGGATTAAGCCGAGTTCCAAAGAAGATTAAACCAAGGAGGCATAGAAACAATGCTCAACTTTGCTCCGAGGAAGAAACTGGGACAAGCAATTCGGAGGTTGAGACATATGATGACGATGATGCCTCAAAGAAGAGGAAAAAGAAGAATGTTCTCAAACCGCATCAAATAAGGCACAAAGACAATGAACCCACAGGAGACTGTGAGGCTGTTGCACTTGTACCAAAGAAGATTAGACCTAGGAGGAATAGAAACAGCGGTCAAATTCCTGGAGTAAGCCATTCTGAGGTTCGGACATGTAATGGGGATGATGCCATGAAGAAGAAAATTCGGCGTCACAGAAGGCAGAAAGGCACTGAACCGACAGGAGAGTGTAAGGCTATTGTACCTGTTAGTAATGAGGATGATGCGCCCAAAGAACCCACAGAGAAATCTTGTTCCGATCAAATCATAGGAACATCAGATGAAGAGAAAGCTATTTCTCACTTTCTACATGAATCAAAGAAGAGAAAGCTTGAAGTTGCTGATGATGAGACTGATAATCCTGTTGTGGCTTCCTTGGGGAAAAAGAAATACAAGAAGAGGCATGCTCAAACTACTAAACGGCATGCTCAAATACAAGAGGCCACAATCAAATCTGGGAAGGAACAAGCGAGCAGTGGCGATGATATGACACTTAATTGTTTTTTACGTAATAGATCAAAGAAGCGACGTGAATCTGGCAGAGGAGATATTCAGAATTTCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0048285 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051225 GO:0051252 GO:0060255 GO:0065007 GO:0070925 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0140014 GO:0140110 GO:1901363 GO:1902850 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

921

Amino Acids

105.05

Weight (kDa)

8.03

Isoelectric Point (pI)

51.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_6	PF13921	2 - 55	2.2e-10	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	44 - 88	2e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	47 - 96	1.2e-10	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	98 - 141	4.3e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	100 - 148	1.3e-09	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	151 - 191	3.2e-14	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	152 - 195	2.6e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002490)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18100 AT3G18100 AT3G18100 AT3G18100
fragaria_vesca	FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070
malus_domestica	MD14G1233900.v1.1
prunus_persica	Prupe.5G230100_v2.0.a1 Prupe.5G230100_v2.0.a1
pyrus_communis	pycom14g19490
rosa_chinensis	RchiOBHm_Chr7g0178781 RchiOBHm_Chr7g0230201
rosa_laevigata	RLG00000005416
rosa_multiflora	Rmu_sc0001901.1_g000001 Rmu_sc0002822.1_g000027 Rmu_sc0004110.1_g000007 Rmu_sc0004110.1_g000008 Rmu_sc0015029.1_g000002 Rmu_sc0025325.1_g000009
rosa_roxburghii	Rroxscaffold_3G00230300 Rroxscaffold_3G00274620
rosa_rugosa	Rorug06G0419400 Rorug06G0419500 Rorug06G0419600
rosa_samantha	Rh7AG018900 Rh7AG408900 Rh7AG409000 Rh7BG018200 Rh7BG388800 Rh7CG019000 Rh7DG018800 Rh7DG406800
rosa_wichuraiana	Rw0G022580 Rw0G022590 Rw7G001530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	138
Acc65I	GGTACC	1 cut(s)	1982
AccB1I	GGYRCC	1 cut(s)	1982
AccB7I	CCANNNNNTGG	2 cut(s)	543, 1952
AccBSI	CCGCTC	3 cut(s)	10, 218, 1907
AccII	CGCG	2 cut(s)	102, 1057
AccIII	TCCGGA	1 cut(s)	1858
AclI	AACGTT	1 cut(s)	394
AclWI	GGATC	6 cut(s)	419, 788, 801, 1113, 1226, 1239
AcoI	YGGCCR	1 cut(s)	118
AcsI	RAATTY	5 cut(s)	889, 926, 2277, 2340, 2752
AcuI	CTGAAG	4 cut(s)	332, 534, 734, 1755
AcyI	GRCGYC	2 cut(s)	135, 2347
AfaI	GTAC	5 cut(s)	325, 1513, 1984, 2235, 2400
AfeI	AGCGCT	1 cut(s)	777
AfiI	CCNNNNNNNGG	4 cut(s)	543, 1147, 1952, 2299
AflIII	ACRYGT	3 cut(s)	895, 1055, 2309
AjiI	CACGTC	1 cut(s)	2726
AjnI	CCWGG	3 cut(s)	444, 1183, 2281
AjuI	GAANNNNNNNTTGG	4 cut(s)	574, 606, 820, 852
AloI	GAACNNNNNNTCC	2 cut(s)	272, 304
Alw26I	GTCTC	9 cut(s)	9, 349, 732, 786, 1046, 1059, 2111, 2205, 2540
AlwI	GGATC	6 cut(s)	419, 788, 801, 1113, 1226, 1239
Ama87I	CYCGRG	1 cut(s)	257
Aor13HI	TCCGGA	1 cut(s)	1858
Aor51HI	AGCGCT	1 cut(s)	777
AoxI	GGCC	7 cut(s)	90, 118, 205, 824, 877, 1954, 2637
ApeKI	GCWGC	5 cut(s)	262, 331, 401, 718, 1799
ApoI	RAATTY	5 cut(s)	889, 926, 2277, 2340, 2752
ArsI	GACNNNNNNTTYG	4 cut(s)	227, 259, 2089, 2121
AseI	ATTAAT	1 cut(s)	1320
Asp700I	GAANNNNTTC	4 cut(s)	284, 395, 489, 1014
Asp718I	GGTACC	1 cut(s)	1982
AspA2I	CCTAGG	1 cut(s)	2252
AspLEI	GCGC	3 cut(s)	104, 778, 2425
AspS9I	GGNCC	8 cut(s)	91, 206, 253, 645, 878, 1250, 1416, 1955
AsuC2I	CCSGG	1 cut(s)	1659
AsuHPI	GGTGA	3 cut(s)	106, 496, 1475
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	4 cut(s)	253, 645, 1250, 1416
AvrII	CCTAGG	1 cut(s)	2252
AxyI	CCTNAGG	1 cut(s)	1146
BamHI	GGATCC	2 cut(s)	793, 1231
BanI	GGYRCC	1 cut(s)	1982
BbsI	GAAGAC	2 cut(s)	1593, 2015
BbvI	GCAGC	5 cut(s)	249, 318, 388, 730, 1786
BccI	CCATC	3 cut(s)	577, 1524, 1836
BceAI	ACGGC	3 cut(s)	85, 368, 2633
BciT130I	CCWGG	3 cut(s)	446, 1185, 2283
BclI	TGATCA	1 cut(s)	111
BcnI	CCSGG	1 cut(s)	1659
BcoDI	GTCTC	9 cut(s)	9, 349, 732, 786, 1046, 1059, 2111, 2205, 2540
BfaI	CTAG	3 cut(s)	168, 2004, 2253
BfmI	CTRYAG	3 cut(s)	907, 1449, 1482
BfoI	RGCGCY	1 cut(s)	779
BglII	AGATCT	1 cut(s)	976
BisI	GCNGC	7 cut(s)	100, 263, 332, 335, 402, 719, 1800
BlnI	CCTAGG	1 cut(s)	2252
BlsI	GCNGC	7 cut(s)	101, 264, 333, 336, 403, 720, 1801
Bme1390I	CCNGG	4 cut(s)	446, 1185, 1659, 2283
Bme18I	GGWCC	4 cut(s)	253, 645, 1250, 1416
BmeT110I	CYCGRG	1 cut(s)	257
BmgBI	CACGTC	1 cut(s)	2726
BmgT120I	GGNCC	8 cut(s)	91, 206, 253, 645, 878, 1250, 1416, 1955
BmiI	GGNNCC	5 cut(s)	208, 795, 1233, 1385, 1984
BmrFI	CCNGG	4 cut(s)	446, 1185, 1659, 2283
BmrI	ACTGGG	3 cut(s)	1165, 1234, 2103
BmsI	GCATC	8 cut(s)	180, 616, 1063, 1420, 2125, 2185, 2314, 2410
BmuI	ACTGGG	3 cut(s)	1165, 1234, 2103
BpiI	GAAGAC	2 cut(s)	1593, 2015
BplI	GAGNNNNNCTC	2 cut(s)	2587, 2619
BpmI	CTGGAG	3 cut(s)	1563, 1855, 2304
BpuEI	CTTGAG	1 cut(s)	1972
BpuMI	CCSGG	1 cut(s)	1659
BsaAI	YACGTR	2 cut(s)	1898, 2705
BsaHI	GRCGYC	2 cut(s)	135, 2347
BsaWI	WCCGGW	2 cut(s)	1815, 1858
BsaXI	ACNNNNNCTCC	4 cut(s)	221, 251, 272, 302
Bsc4I	CCNNNNNNNGG	4 cut(s)	543, 1147, 1952, 2299
Bse118I	RCCGGY	1 cut(s)	116
Bse1I	ACTGG	7 cut(s)	618, 805, 932, 1160, 1229, 1513, 2098
Bse21I	CCTNAGG	1 cut(s)	1146
Bse3DI	GCAATG	3 cut(s)	463, 751, 1780
BseAI	TCCGGA	1 cut(s)	1858
BseBI	CCWGG	3 cut(s)	446, 1185, 2283
BseLI	CCNNNNNNNGG	4 cut(s)	543, 1147, 1952, 2299
BseMI	GCAATG	3 cut(s)	463, 751, 1780
BseMII	CTCAG	6 cut(s)	876, 1041, 1083, 1682, 1891, 2289
BseNI	ACTGG	7 cut(s)	618, 805, 932, 1160, 1229, 1513, 2098
BseRI	GAGGAG	6 cut(s)	202, 368, 371, 713, 1852, 2754
BseXI	GCAGC	5 cut(s)	249, 318, 388, 730, 1786
BseYI	CCCAGC	1 cut(s)	1945
BsgI	GTGCAG	2 cut(s)	437, 594
Bsh1236I	CGCG	2 cut(s)	102, 1057
BshFI	GGCC	7 cut(s)	92, 120, 207, 826, 879, 1956, 2639
BshNI	GGYRCC	1 cut(s)	1982
BsiHKCI	CYCGRG	1 cut(s)	257
BsiSI	CCGG	4 cut(s)	117, 1658, 1816, 1859
BslFI	GGGAC	2 cut(s)	1354, 2110
BslI	CCNNNNNNNGG	4 cut(s)	543, 1147, 1952, 2299
BsmAI	GTCTC	9 cut(s)	9, 349, 732, 786, 1046, 1059, 2111, 2205, 2540
BsmBI	CGTCTC	2 cut(s)	349, 1046
BsmFI	GGGAC	2 cut(s)	1354, 2110
BsnI	GGCC	7 cut(s)	92, 120, 207, 826, 879, 1956, 2639
BsoBI	CYCGRG	1 cut(s)	257
Bsp13I	TCCGGA	1 cut(s)	1858
Bsp19I	CCATGG	2 cut(s)	1029, 1253
BspANI	GGCC	7 cut(s)	92, 120, 207, 826, 879, 1956, 2639
BspCNI	CTCAG	6 cut(s)	875, 1042, 1082, 1681, 1890, 2290
BspEI	TCCGGA	1 cut(s)	1858
BspFNI	CGCG	2 cut(s)	102, 1057
BspHI	TCATGA	1 cut(s)	481
BspLI	GGNNCC	5 cut(s)	208, 795, 1233, 1385, 1984
BspPI	GGATC	6 cut(s)	419, 788, 801, 1113, 1226, 1239
BspT107I	GGYRCC	1 cut(s)	1982
BsrBI	CCGCTC	3 cut(s)	10, 218, 1907
BsrDI	GCAATG	3 cut(s)	463, 751, 1780
BsrFI	RCCGGY	1 cut(s)	116
BsrI	ACTGG	7 cut(s)	618, 805, 932, 1160, 1229, 1513, 2098
BssAI	RCCGGY	1 cut(s)	116
BssNI	GRCGYC	2 cut(s)	135, 2347
BssT1I	CCWWGG	9 cut(s)	154, 827, 1029, 1253, 1419, 1951, 2048, 2252, 2571
Bst2UI	CCWGG	3 cut(s)	446, 1185, 2283
Bst4CI	ACNGT	2 cut(s)	1982, 2216
Bst6I	CTCTTC	8 cut(s)	510, 1734, 1878, 1988, 2141, 2475, 2513, 2588
BstACI	GRCGYC	2 cut(s)	135, 2347
BstBAI	YACGTR	2 cut(s)	1898, 2705
BstC8I	GCNNGC	5 cut(s)	12, 1372, 2601, 2622, 2668
BstDEI	CTNAG	9 cut(s)	734, 862, 1050, 1069, 1146, 1237, 1668, 1877, 2298
BstDSI	CCRYGG	2 cut(s)	1029, 1253
BstEII	GGTNACC	1 cut(s)	502
BstENI	CCTNNNNNAGG	1 cut(s)	1145
BstFNI	CGCG	2 cut(s)	102, 1057
BstH2I	RGCGCY	1 cut(s)	779
BstHHI	GCGC	3 cut(s)	104, 778, 2425
BstMAI	GTCTC	9 cut(s)	9, 349, 732, 786, 1046, 1059, 2111, 2205, 2540
BstMWI	GCNNNNNNNGC	4 cut(s)	307, 863, 1371, 1454
BstNI	CCWGG	3 cut(s)	446, 1185, 2283
BstNSI	RCATGY	4 cut(s)	899, 2313, 2603, 2624
BstPI	GGTNACC	1 cut(s)	502
BstSCI	CCNGG	4 cut(s)	444, 1183, 1657, 2281
BstSFI	CTRYAG	3 cut(s)	907, 1449, 1482
BstSNI	TACGTA	2 cut(s)	1898, 2705
BstUI	CGCG	2 cut(s)	102, 1057
BstV1I	GCAGC	5 cut(s)	249, 318, 388, 730, 1786
BstV2I	GAAGAC	2 cut(s)	1593, 2015
BstX2I	RGATCY	4 cut(s)	793, 976, 1105, 1231
BstXI	CCANNNNNNTGG	1 cut(s)	1301
BstYI	RGATCY	4 cut(s)	793, 976, 1105, 1231
Bsu36I	CCTNAGG	1 cut(s)	1146
BsuRI	GGCC	7 cut(s)	92, 120, 207, 826, 879, 1956, 2639
BtgI	CCRYGG	2 cut(s)	1029, 1253
BtgZI	GCGATG	2 cut(s)	124, 2691
BtrI	CACGTC	1 cut(s)	2726
BtsI	GCAGTG	1 cut(s)	2677
BtsIMutI	CAGTG	4 cut(s)	611, 1367, 2367, 2677
Cac8I	GCNNGC	5 cut(s)	12, 1372, 2601, 2622, 2668
CciI	TCATGA	1 cut(s)	481
CfoI	GCGC	3 cut(s)	104, 778, 2425
Cfr10I	RCCGGY	1 cut(s)	116
Cfr13I	GGNCC	8 cut(s)	91, 206, 253, 645, 878, 1250, 1416, 1955
CseI	GACGC	3 cut(s)	1046, 1063, 2336
Csp6I	GTAC	5 cut(s)	324, 1512, 1983, 2234, 2399
CspCI	CAANNNNNGTGG	2 cut(s)	520, 555
CviQI	GTAC	5 cut(s)	324, 1512, 1983, 2234, 2399
DdeI	CTNAG	9 cut(s)	734, 862, 1050, 1069, 1146, 1237, 1668, 1877, 2298
EaeI	YGGCCR	1 cut(s)	118
Eam1104I	CTCTTC	8 cut(s)	510, 1734, 1878, 1988, 2141, 2475, 2513, 2588
EarI	CTCTTC	8 cut(s)	510, 1734, 1878, 1988, 2141, 2475, 2513, 2588
EciI	GGCGGA	1 cut(s)	86
Eco105I	TACGTA	2 cut(s)	1898, 2705
Eco130I	CCWWGG	9 cut(s)	154, 827, 1029, 1253, 1419, 1951, 2048, 2252, 2571
Eco47I	GGWCC	4 cut(s)	253, 645, 1250, 1416
Eco47III	AGCGCT	1 cut(s)	777
Eco57I	CTGAAG	4 cut(s)	332, 534, 734, 1755
Eco81I	CCTNAGG	1 cut(s)	1146
Eco88I	CYCGRG	1 cut(s)	257
Eco91I	GGTNACC	1 cut(s)	502
EcoNI	CCTNNNNNAGG	1 cut(s)	1145
EcoO109I	RGGNCCY	4 cut(s)	91, 206, 253, 645
EcoO65I	GGTNACC	1 cut(s)	502
EcoRII	CCWGG	3 cut(s)	444, 1183, 2281
EcoT14I	CCWWGG	9 cut(s)	154, 827, 1029, 1253, 1419, 1951, 2048, 2252, 2571
ErhI	CCWWGG	9 cut(s)	154, 827, 1029, 1253, 1419, 1951, 2048, 2252, 2571
Esp3I	CGTCTC	2 cut(s)	349, 1046
FaqI	GGGAC	2 cut(s)	1354, 2110
FauNDI	CATATG	2 cut(s)	1804, 2122
FbaI	TGATCA	1 cut(s)	111
Fnu4HI	GCNGC	7 cut(s)	100, 263, 332, 335, 402, 719, 1800
Fsp4HI	GCNGC	7 cut(s)	100, 263, 332, 335, 402, 719, 1800
FspBI	CTAG	3 cut(s)	168, 2004, 2253
GlaI	GCGC	3 cut(s)	103, 777, 2424
GluI	GCNGC	7 cut(s)	100, 263, 332, 335, 402, 719, 1800
GsaI	CCCAGC	1 cut(s)	1949
GsuI	CTGGAG	3 cut(s)	1563, 1855, 2304
HaeII	RGCGCY	1 cut(s)	779
HaeIII	GGCC	7 cut(s)	92, 120, 207, 826, 879, 1956, 2639
HapII	CCGG	4 cut(s)	117, 1658, 1816, 1859
HgaI	GACGC	3 cut(s)	1046, 1063, 2336
HhaI	GCGC	3 cut(s)	104, 778, 2425
Hin1I	GRCGYC	2 cut(s)	135, 2347
Hin6I	GCGC	3 cut(s)	102, 776, 2423
HinP1I	GCGC	3 cut(s)	102, 776, 2423
HincII	GTYRAC	2 cut(s)	1153, 1696
HindII	GTYRAC	2 cut(s)	1153, 1696
HindIII	AAGCTT	1 cut(s)	2525
HpaI	GTTAAC	1 cut(s)	1153
HpaII	CCGG	4 cut(s)	117, 1658, 1816, 1859
HphI	GGTGA	3 cut(s)	106, 496, 1475
Hpy166II	GTNNAC	4 cut(s)	1153, 1416, 1696, 1778
Hpy8I	GTNNAC	4 cut(s)	1153, 1416, 1696, 1778
HpyAV	CCTTC	7 cut(s)	348, 537, 784, 1719, 1840, 2349, 2650
HpyCH4III	ACNGT	2 cut(s)	1982, 2216
HpyCH4IV	ACGT	7 cut(s)	135, 201, 394, 414, 1897, 2704, 2725
HpyF10VI	GCNNNNNNNGC	4 cut(s)	307, 863, 1371, 1454
HpyF3I	CTNAG	9 cut(s)	734, 862, 1050, 1069, 1146, 1237, 1668, 1877, 2298
HpySE526I	ACGT	7 cut(s)	135, 201, 394, 414, 1897, 2704, 2725
Hsp92I	GRCGYC	2 cut(s)	135, 2347
HspAI	GCGC	3 cut(s)	102, 776, 2423
Kpn2I	TCCGGA	1 cut(s)	1858
KpnI	GGTACC	1 cut(s)	1986
Ksp22I	TGATCA	1 cut(s)	111
KspAI	GTTAAC	1 cut(s)	1153
LmnI	GCTCC	5 cut(s)	223, 270, 1159, 1383, 2084
Lsp1109I	GCAGC	5 cut(s)	249, 318, 388, 730, 1786
LweI	GCATC	8 cut(s)	180, 616, 1063, 1420, 2125, 2185, 2314, 2410
MaeI	CTAG	3 cut(s)	168, 2004, 2253
MaeII	ACGT	7 cut(s)	135, 201, 394, 414, 1897, 2704, 2725
MaeIII	GTNAC	2 cut(s)	502, 2348
MbiI	CCGCTC	3 cut(s)	10, 218, 1907
MfeI	CAATTG	1 cut(s)	1764
MflI	RGATCY	4 cut(s)	793, 976, 1105, 1231
MluI	ACGCGT	1 cut(s)	1055
MlyI	GAGTC	5 cut(s)	224, 230, 1061, 1345, 1570
MmeI	TCCRAC	4 cut(s)	252, 258, 372, 1574
MroI	TCCGGA	1 cut(s)	1858
MroXI	GAANNNNTTC	4 cut(s)	284, 395, 489, 1014
MslI	CAYNNNNRTG	1 cut(s)	1360
MspA1I	CMGCKG	1 cut(s)	2271
MspI	CCGG	4 cut(s)	117, 1658, 1816, 1859
MspR9I	CCNGG	4 cut(s)	446, 1185, 1659, 2283
MunI	CAATTG	1 cut(s)	1764
MvaI	CCWGG	3 cut(s)	446, 1185, 2283
MvnI	CGCG	2 cut(s)	102, 1057
MwoI	GCNNNNNNNGC	4 cut(s)	307, 863, 1371, 1454
NciI	CCSGG	1 cut(s)	1659
NcoI	CCATGG	2 cut(s)	1029, 1253
NdeI	CATATG	2 cut(s)	1804, 2122
NlaIV	GGNNCC	5 cut(s)	208, 795, 1233, 1385, 1984
NmeAIII	GCCGAG	2 cut(s)	40, 2051
NmuCI	GTSAC	2 cut(s)	502, 2348
NspI	RCATGY	4 cut(s)	899, 2313, 2603, 2624
PaeI	GCATGC	2 cut(s)	2603, 2624
PaeR7I	CTCGAG	1 cut(s)	257
PagI	TCATGA	1 cut(s)	481
PciI	ACATGT	2 cut(s)	895, 2309
PdmI	GAANNNNTTC	4 cut(s)	284, 395, 489, 1014
PflFI	GACNNNGTC	1 cut(s)	134
PflMI	CCANNNNNTGG	2 cut(s)	543, 1952
PfoI	TCCNGGA	2 cut(s)	444, 2281
PkrI	GCNGC	7 cut(s)	101, 264, 333, 336, 403, 720, 1801
PleI	GAGTC	5 cut(s)	224, 230, 1061, 1345, 1570
PpsI	GAGTC	5 cut(s)	224, 230, 1061, 1345, 1570
Ppu21I	YACGTR	2 cut(s)	1898, 2705
PpuMI	RGGWCCY	2 cut(s)	253, 645
PscI	ACATGT	2 cut(s)	895, 2309
PshBI	ATTAAT	1 cut(s)	1320
Psp1406I	AACGTT	1 cut(s)	394
Psp5II	RGGWCCY	2 cut(s)	253, 645
Psp6I	CCWGG	3 cut(s)	444, 1183, 2281
PspEI	GGTNACC	1 cut(s)	502
PspFI	CCCAGC	1 cut(s)	1945
PspGI	CCWGG	3 cut(s)	444, 1183, 2281
PspN4I	GGNNCC	5 cut(s)	208, 795, 1233, 1385, 1984
PspPI	GGNCC	8 cut(s)	91, 206, 253, 645, 878, 1250, 1416, 1955
PspPPI	RGGWCCY	2 cut(s)	253, 645
PspXI	VCTCGAGB	1 cut(s)	257
PsuI	RGATCY	4 cut(s)	793, 976, 1105, 1231
PsyI	GACNNNGTC	1 cut(s)	134
RsaI	GTAC	5 cut(s)	325, 1513, 1984, 2235, 2400
RsaNI	GTAC	5 cut(s)	324, 1512, 1983, 2234, 2399
RseI	CAYNNNNRTG	1 cut(s)	1360
SatI	GCNGC	7 cut(s)	100, 263, 332, 335, 402, 719, 1800
Sau96I	GGNCC	8 cut(s)	91, 206, 253, 645, 878, 1250, 1416, 1955
SchI	GAGTC	5 cut(s)	224, 230, 1061, 1345, 1570
ScrFI	CCNGG	4 cut(s)	446, 1185, 1659, 2283
SfaNI	GCATC	8 cut(s)	180, 616, 1063, 1420, 2125, 2185, 2314, 2410
SfcI	CTRYAG	3 cut(s)	907, 1449, 1482
Sfr274I	CTCGAG	1 cut(s)	257
SinI	GGWCC	4 cut(s)	253, 645, 1250, 1416
SlaI	CTCGAG	1 cut(s)	257
SmiMI	CAYNNNNRTG	1 cut(s)	1360
SmlI	CTYRAG	2 cut(s)	257, 1987
SmoI	CTYRAG	2 cut(s)	257, 1987
SnaBI	TACGTA	2 cut(s)	1898, 2705
SphI	GCATGC	2 cut(s)	2603, 2624
SspI	AATATT	1 cut(s)	1324
SspMI	CTAG	3 cut(s)	168, 2004, 2253
StyD4I	CCNGG	4 cut(s)	444, 1183, 1657, 2281
StyI	CCWWGG	9 cut(s)	154, 827, 1029, 1253, 1419, 1951, 2048, 2252, 2571
TaaI	ACNGT	2 cut(s)	1982, 2216
TaiI	ACGT	7 cut(s)	138, 204, 397, 417, 1900, 2707, 2728
TaqI	TCGA	5 cut(s)	246, 258, 946, 1110, 1663
TatI	WGTACW	1 cut(s)	323
TauI	GCSGC	2 cut(s)	102, 337
TscAI	CASTG	4 cut(s)	618, 1367, 2374, 2677
TseFI	GTSAC	2 cut(s)	502, 2348
TseI	GCWGC	5 cut(s)	262, 331, 401, 718, 1799
Tsp45I	GTSAC	2 cut(s)	502, 2348
TspGWI	ACGGA	4 cut(s)	331, 483, 1263, 1277
TspRI	CASTG	4 cut(s)	618, 1367, 2374, 2677
Tth111I	GACNNNGTC	1 cut(s)	134
Van91I	CCANNNNNTGG	2 cut(s)	543, 1952
VpaK11BI	GGWCC	4 cut(s)	253, 645, 1250, 1416
VspI	ATTAAT	1 cut(s)	1320
XagI	CCTNNNNNAGG	1 cut(s)	1145
XapI	RAATTY	5 cut(s)	889, 926, 2277, 2340, 2752
XceI	RCATGY	4 cut(s)	899, 2313, 2603, 2624
XhoI	CTCGAG	1 cut(s)	257
XmaJI	CCTAGG	1 cut(s)	2252
XmnI	GAANNNNTTC	4 cut(s)	284, 395, 489, 1014
XspI	CTAG	3 cut(s)	168, 2004, 2253
ZraI	GACGTC	1 cut(s)	136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.