Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002490

Physical Location & Seq

Genomic Coordinates Reverse (-)

17581425 .. 17587637

Gene Structure 6213 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G230100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3183 bp

TCGTTATTACGCGGAACGCCCCCGCCTCTCAGACTCGCAATGTCTCCTCTCACCGGAAGCGAAGAGGACCAGTTTTCCGGCAGCGATAGAGAAGAAGAAGAAGAAGATGACGACGAAGATTTCGACGAGGACATGGAAGCCATAAGGCGTGCCTGTATGCTCACCGGCAAGAACCCCGACGACCTCAACCCCAACAACAACAACCACGGCGGCGACGACCCCCGCCACGCCTCCGGTTCAGAGTCCGAATCCGACTCCGACGAAGGCGACGATGACATTGAGTTGCTCCGGAAAATAAGGAGTCGATTCTCGAATATTTCCAATTTTTGCGAGCCTCTGTCTCTGAAGCCTTTGAGTTCATTGCCGCCTGCTGTCTCCGACGACGAAGAGGACGATTACCAAACGCTTCTTTCCGTTCAGAAACGTTTCGCAGCCTACCAAAACGATACTTGCAAACCAGTGAAGGAAACTTGCAATGAAATTGCTCATGAAAGTTCTCAGGGTACTGAAGATGCATGTATGGCCATCCATCCACTGAGTGACAATGCTGAGGGACAGCCTTCCGCTTCGATTGAGTTGCAACAATCTGATTCTTGCAGGCCATCTACGTTGCCAGCCAAATACTCAACCTTCCCAAAGTCTGCTCAGGTGTTTATGGATGCCATTAAGAAGAATAGGTCCAGTCAGAAGTTTCTTCGGAGTAAGTTGGTCCAAATTGAAGCAAAAATTGAGGAGAACAGAAAACTGAAGGAACGTGTCAAAATCCTTAAAGACTTTCAAGTTTCTTGCAAAAAACGAACAGGGGAGGCATTGTCCCAAAAGAAGGATCCTCGTGTCCAGTTAATTTTGGTGAACAGGCCAAGGAAGTTTAGGGATTTAAAGGCTCATGACAAAAAGATCTCAGCTATGTTTTATGGCCCAGAAGAGAATTCACATGTTGCTAACTACAGAATGACATTGACGAAATTTCTGCATTCATTAGATCGAAAAAAATGGTCAAAGGCCGAAAAGAAAGCCCTTGAAAAGGGAATAAGACAACAATTTCAAGAAATGGTGCTTCAGTTTTCTGTACATGAATCGAGTTGTTCTGAGAGACCGTATGGAGACTCTAATCATATCGATGACATTTTGGCTTCAATCAAAGATCTTGAAATTACCCCAGAAAAAATTAGAGAATTCCTGCCTAAGGTTAACTGGGAGCAGTTGGCTTCCATGTATATCGTTGGTCGTTCTGGTGCAGAATGTGAAGCAAGGTGGTTGAACTGGGAGGATCCTTTAATCAATCACAAATCATGGACTGCGAAGGAGGACAAGAATCTTCTGCATCTTGTCCAGGAGAAGGGGATTGATAATTGGTTTAATGTTGCAGTATTGTTGGGGACAAACAGGACTCCGTTTCAGTGCTTGGCACGCTATCAAAGGAGCCTAAATGCTTCCATACTGAAACGGGAGTGGACCAAAGATGAGGATGCAAGACTTCGCTCAGCTGTAGAAGCTTTGGGTGAAGGTGATTGGCAATCTGTTGCTTCTGCTTTGGAAGGACGGACTGGTTCCCAATGCTCTAATAGATGGAAGAAATCTCTTCATCCAACCAGGAAAAGAGAAGGTAGGTGGACTCCAGAGGAAGACAAACGTCTGAAAGTGGCTCAAATGCTCTTTGGCCCCAAAAATTGGAATAAAACAGCTCAATTTGTGCCTGGTCGAACTCAGGCACAGTGTAGAGATAGATATGTCAACTCTTTAGAACCTTCTTTGAAGTGGGGTGAATGGACTGAAGAAGAGGACTCAAGATTGAGAGAAGCCATTGCAGAATATGGATATTGCTGGTCCAAAGTTGCTGCATGTGTGCCTAGACGTACTGATAATATGTGCTGGAGGTACGGGGTCCTGATTATGTCAAATTGTTTTATTCATTTATTTTGTTGCCTGCACTTATTTTTTCTGACTTTCATTTTGAGCAGGAGATGGAAGGTGTTATTTCCAGATGACGTGTGCTTGCTCAAAGAAGAGAAAAGAATAAGAAAGGTGGCTCTTATGTGCAACTTTGTTGATCGGGAGACAGAACGTCCAGCCCTTGGCCCTAATGATTTTCATCCGCCAATTGTTACTTCAACCAAAACTTTAACTTATTCTAGGAAGCAGAAAGGAAAATTAAGCAAAGTTTCGAAGAAGATTAGATCCAGGAGGCAAAAAAATGGTCAAAGTTGTTCCAAGGTATCTGAGATAGATAGTTTTGATAAGGTTGAGACATGTGATGGACATGATGCCTCAAATACGAAGAATAAAGTTCGTAAACAGCGACGCATAAGGCACAAAGGTACTCATTGTGAGCAGGATACACACAAAGAACCTAGGGAAATGTCTTGTTCAGATCAGATTGTAGGAACATCAGATGGAGATGATACTACACTTGCTTGCTTTCTACGCAATAAATCAAAGAAGAGAAAGCTTGGCCCTGTCCCCTCAATCAATGGAAAAAAGAAGAGAAAGCTTGTAGCTTCTGATTCTGCTGTTCAGGAGTGCCCCGCAAACAGTATAGAGGAGGGATCTGAAGTGCATCCTGAAATGAATAAAGTTTGCGATGGAAATCAAATAGTCTCTTTCCGGAAAGATGATGAGTTTATAGTCCATTGTGATGATAGAATTTCAGAAAGAATGCCAACTTGCAGCGTGCAGTCTAGTCATTTGAATGGTAACACCATGGCTAGTGACAAGGAGCCTGATGGACTAAAGTTAGTCAGTGGGTGGAAGGCTGGCTTACAAGAACCTGTGAGGAAAGTGGTGGCCATTGATCCAGAAAGTGATGGTGATACTGATGATGTTGTTCTTGCTTCCTGGAGGAAAAAGAAATTGAAGAAGAGGCACCCTCAAACTGCCAAAAGCGGTCCTCACGCTTGCCCTCCCTCAGGTGTAACGACAAGATCAGAGCCGCTTCCGAAAAGAGTAGATCAGTCTAATGATCGAAGCCAAGTGCCCTTTGTGGCTGTTGGTAATGAGCCTGGTGCAGTAGATATAGGAAAACAACATGGGGTTGATCATTGTGAAACTGTGAGGGAAATAGTGAACATTGGCGCAGAAGGTGATCATGAGGCTGGTGATACAACACTCGCTTGCTTTCTGCGAAATAAATCAAAGAACAGGCAGCGTCAGTCGCGCAGAGGTGATAACCAGAAGCCAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0048285 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051225 GO:0051252 GO:0060255 GO:0065007 GO:0070925 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0140014 GO:0140110 GO:1901363 GO:1902850 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

1061

Amino Acids

120.53

Weight (kDa)

8.55

Isoelectric Point (pI)

56.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002490)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18100 AT3G18100 AT3G18100 AT3G18100
fragaria_vesca	FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070
malus_domestica	MD14G1233900.v1.1
prunus_persica	Prupe.5G230100_v2.0.a1 Prupe.5G230100_v2.0.a1
pyrus_communis	pycom14g19490
rosa_chinensis	RchiOBHm_Chr7g0178781 RchiOBHm_Chr7g0230201
rosa_laevigata	RLG00000005416
rosa_multiflora	Rmu_sc0001901.1_g000001 Rmu_sc0002822.1_g000027 Rmu_sc0004110.1_g000007 Rmu_sc0004110.1_g000008 Rmu_sc0015029.1_g000002 Rmu_sc0025325.1_g000009
rosa_roxburghii	Rroxscaffold_3G00230300 Rroxscaffold_3G00274620
rosa_rugosa	Rorug06G0419400 Rorug06G0419500 Rorug06G0419600
rosa_samantha	Rh7AG018900 Rh7AG408900 Rh7AG409000 Rh7BG018200 Rh7BG388800 Rh7CG019000 Rh7DG018800 Rh7DG406800
rosa_wichuraiana	Rw0G022580 Rw0G022590 Rw7G001530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2862
AccB7I	CCANNNNNTGG	2 cut(s)	1671, 2075
AccII	CGCG	2 cut(s)	12, 3154
AccIII	TCCGGA	2 cut(s)	288, 2604
AclI	AACGTT	1 cut(s)	424
AclWI	GGATC	7 cut(s)	821, 834, 1265, 1278, 2172, 2554, 2786
AcoI	YGGCCR	2 cut(s)	522, 2784
AcsI	RAATTY	4 cut(s)	928, 965, 1175, 2643
AcuI	CTGAAG	6 cut(s)	365, 528, 767, 1043, 1794, 2571
AdeI	CACNNNGTG	1 cut(s)	539
AfaI	GTAC	5 cut(s)	505, 1071, 1858, 1880, 2320
AfiI	CCNNNNNNNGG	8 cut(s)	53, 823, 1024, 1186, 1339, 1671, 2075, 2906
AflIII	ACRYGT	4 cut(s)	754, 934, 1989, 2249
AhdI	GACNNNNNGTC	1 cut(s)	2064
AjiI	CACGTC	1 cut(s)	1990
AjnI	CCWGG	6 cut(s)	1332, 1592, 1696, 2180, 2834, 2998
AjuI	GAANNNNNNNTTGG	2 cut(s)	2092, 2124
AluBI	AGCT	7 cut(s)	905, 1487, 1496, 1685, 2449, 2491, 2498
AluI	AGCT	7 cut(s)	905, 1487, 1496, 1685, 2449, 2491, 2498
Alw26I	GTCTC	8 cut(s)	48, 345, 379, 1087, 1098, 2051, 2240, 2602
AlwI	GGATC	7 cut(s)	821, 834, 1265, 1278, 2172, 2554, 2786
Aor13HI	TCCGGA	2 cut(s)	288, 2604
AoxI	GGCC	9 cut(s)	522, 599, 857, 916, 1002, 1660, 2077, 2452, 2784
ApeKI	GCWGC	5 cut(s)	81, 431, 1838, 2667, 3142
ApoI	RAATTY	4 cut(s)	928, 965, 1175, 2643
ArsI	GACNNNNNNTTYG	6 cut(s)	104, 136, 1936, 1968, 2182, 2214
Asp700I	GAANNNNTTC	1 cut(s)	425
AspA2I	CCTAGG	1 cut(s)	2351
AspLEI	GCGC	2 cut(s)	3074, 3156
AsuII	TTCGAA	1 cut(s)	2165
AvaII	GGWCC	7 cut(s)	67, 678, 709, 1455, 1827, 1885, 2885
AvrII	CCTAGG	1 cut(s)	2351
AxyI	CCTNAGG	2 cut(s)	1185, 2905
BaeGI	GKGCMC	2 cut(s)	2525, 2976
BalI	TGGCCA	2 cut(s)	524, 2786
BamHI	GGATCC	2 cut(s)	826, 1270
BanI	GGYRCC	1 cut(s)	2862
BauI	CACGAG	1 cut(s)	831
BbsI	GAAGAC	1 cut(s)	1632
BbvCI	CCTCAGC	1 cut(s)	549
BbvI	GCAGC	5 cut(s)	93, 443, 1825, 2679, 3154
BceAI	ACGGC	1 cut(s)	223
BcgI	CGANNNNNNTGC	4 cut(s)	559, 593, 952, 986
BciT130I	CCWGG	6 cut(s)	1334, 1594, 1698, 2182, 2836, 3000
BciVI	GTATCC	1 cut(s)	2329
BclI	TGATCA	2 cut(s)	3034, 3082
BcoDI	GTCTC	8 cut(s)	48, 345, 379, 1087, 1098, 2051, 2240, 2602
BfaI	CTAG	5 cut(s)	1851, 2133, 2352, 2679, 2706
BfmI	CTRYAG	2 cut(s)	946, 1488
BfuI	GTATCC	1 cut(s)	2329
BglII	AGATCT	2 cut(s)	897, 1144
BisI	GCNGC	8 cut(s)	82, 211, 365, 432, 1839, 2668, 2930, 3143
BlnI	CCTAGG	1 cut(s)	2351
BlpI	GCTNAGC	1 cut(s)	1483
BlsI	GCNGC	8 cut(s)	83, 212, 366, 433, 1840, 2669, 2931, 3144
Bme1390I	CCNGG	6 cut(s)	1334, 1594, 1698, 2182, 2836, 3000
Bme18I	GGWCC	7 cut(s)	67, 678, 709, 1455, 1827, 1885, 2885
BmeRI	GACNNNNNGTC	1 cut(s)	2064
BmgBI	CACGTC	1 cut(s)	1990
BmiI	GGNNCC	8 cut(s)	828, 1272, 1424, 1552, 1663, 1886, 2718, 2864
BmrFI	CCNGG	6 cut(s)	1334, 1594, 1698, 2182, 2836, 3000
BmrI	ACTGGG	2 cut(s)	1204, 1273
BmsI	GCATC	6 cut(s)	502, 649, 1333, 1459, 2254, 2566
BmuI	ACTGGG	2 cut(s)	1204, 1273
BoxI	GACNNNNGTC	1 cut(s)	1632
BpiI	GAAGAC	1 cut(s)	1632
BplI	GAGNNNNNCTC	2 cut(s)	2851, 2883
BpmI	CTGGAG	3 cut(s)	1602, 1894, 2857
Bpu10I	CCTNAGC	2 cut(s)	549, 645
Bpu1102I	GCTNAGC	1 cut(s)	1483
Bpu14I	TTCGAA	1 cut(s)	2165
BpuEI	CTTGAG	1 cut(s)	1771
Bsa29I	ATCGAT	1 cut(s)	1119
BsaBI	GATNNNNATC	2 cut(s)	2091, 2586
BsaI	GGTCTC	1 cut(s)	1087
BsaJI	CCNNGG	7 cut(s)	205, 860, 2074, 2211, 2351, 2700, 3176
BsaWI	WCCGGW	4 cut(s)	53, 233, 288, 2604
BsaXI	ACNNNNNCTCC	2 cut(s)	797, 827
Bsc4I	CCNNNNNNNGG	8 cut(s)	53, 823, 1024, 1186, 1339, 1671, 2075, 2906
Bse118I	RCCGGY	1 cut(s)	164
Bse1I	ACTGG	7 cut(s)	70, 458, 681, 838, 1199, 1268, 1552
Bse21I	CCTNAGG	2 cut(s)	1185, 2905
Bse3DI	GCAATG	4 cut(s)	45, 359, 481, 1803
Bse8I	GATNNNNATC	2 cut(s)	2091, 2586
BseAI	TCCGGA	2 cut(s)	288, 2604
BseBI	CCWGG	6 cut(s)	1334, 1594, 1698, 2182, 2836, 3000
BseCI	ATCGAT	1 cut(s)	1119
BseDI	CCNNGG	7 cut(s)	205, 860, 2074, 2211, 2351, 2700, 3176
BseGI	GGATG	7 cut(s)	525, 529, 664, 1474, 1585, 2092, 2557
BseJI	GATNNNNATC	2 cut(s)	2091, 2586
BseLI	CCNNNNNNNGG	8 cut(s)	53, 823, 1024, 1186, 1339, 1671, 2075, 2906
BseMI	GCAATG	4 cut(s)	45, 359, 481, 1803
BseNI	ACTGG	7 cut(s)	70, 458, 681, 838, 1199, 1268, 1552
BseRI	GAGGAG	3 cut(s)	36, 746, 2555
BseSI	GKGCMC	2 cut(s)	2525, 2976
BseXI	GCAGC	5 cut(s)	93, 443, 1825, 2679, 3154
BsgI	GTGCAG	4 cut(s)	1257, 1913, 2693, 3024
Bsh1236I	CGCG	2 cut(s)	12, 3154
BshFI	GGCC	9 cut(s)	524, 601, 859, 918, 1004, 1662, 2079, 2454, 2786
BshNI	GGYRCC	1 cut(s)	2862
BshVI	ATCGAT	1 cut(s)	1119
BsiSI	CCGG	6 cut(s)	54, 78, 165, 234, 289, 2605
BslFI	GGGAC	4 cut(s)	567, 799, 1393, 2444
BslI	CCNNNNNNNGG	8 cut(s)	53, 823, 1024, 1186, 1339, 1671, 2075, 2906
BsmAI	GTCTC	8 cut(s)	48, 345, 379, 1087, 1098, 2051, 2240, 2602
BsmFI	GGGAC	4 cut(s)	567, 799, 1393, 2444
BsmI	GAATGC	2 cut(s)	973, 2661
BsnI	GGCC	9 cut(s)	524, 601, 859, 918, 1004, 1662, 2079, 2454, 2786
Bso31I	GGTCTC	1 cut(s)	1087
Bsp119I	TTCGAA	1 cut(s)	2165
Bsp1286I	GDGCHC	2 cut(s)	2525, 2976
Bsp13I	TCCGGA	2 cut(s)	288, 2604
Bsp1407I	TGTACA	1 cut(s)	1069
Bsp1720I	GCTNAGC	1 cut(s)	1483
Bsp19I	CCATGG	1 cut(s)	2700
BspANI	GGCC	9 cut(s)	524, 601, 859, 918, 1004, 1662, 2079, 2454, 2786
BspDI	ATCGAT	1 cut(s)	1119
BspEI	TCCGGA	2 cut(s)	288, 2604
BspFNI	CGCG	2 cut(s)	12, 3154
BspHI	TCATGA	3 cut(s)	487, 886, 3085
BspLI	GGNNCC	8 cut(s)	828, 1272, 1424, 1552, 1663, 1886, 2718, 2864
BspPI	GGATC	7 cut(s)	821, 834, 1265, 1278, 2172, 2554, 2786
BspT104I	TTCGAA	1 cut(s)	2165
BspT107I	GGYRCC	1 cut(s)	2862
BspTNI	GGTCTC	1 cut(s)	1087
BsrDI	GCAATG	4 cut(s)	45, 359, 481, 1803
BsrFI	RCCGGY	1 cut(s)	164
BsrGI	TGTACA	1 cut(s)	1069
BsrI	ACTGG	7 cut(s)	70, 458, 681, 838, 1199, 1268, 1552
BssAI	RCCGGY	1 cut(s)	164
BssECI	CCNNGG	7 cut(s)	205, 860, 2074, 2211, 2351, 2700, 3176
BssSI	CACGAG	1 cut(s)	831
BssT1I	CCWWGG	6 cut(s)	860, 2074, 2211, 2351, 2700, 3176
Bst2BI	CACGAG	1 cut(s)	831
Bst2UI	CCWGG	6 cut(s)	1334, 1594, 1698, 2182, 2836, 3000
Bst4CI	ACNGT	4 cut(s)	1098, 1716, 2534, 3049
Bst6I	CTCTTC	9 cut(s)	57, 381, 918, 1587, 1773, 2001, 2435, 2477, 2852
BstAUI	TGTACA	1 cut(s)	1069
BstBI	TTCGAA	1 cut(s)	2165
BstDSI	CCRYGG	2 cut(s)	205, 2700
BstENI	CCTNNNNNAGG	3 cut(s)	1022, 1184, 2904
BstF5I	GGATG	7 cut(s)	525, 529, 664, 1474, 1585, 2092, 2557
BstFNI	CGCG	2 cut(s)	12, 3154
BstHHI	GCGC	2 cut(s)	3074, 3156
BstMAI	GTCTC	8 cut(s)	48, 345, 379, 1087, 1098, 2051, 2240, 2602
BstMWI	GCNNNNNNNGC	5 cut(s)	521, 1410, 1493, 2424, 3151
BstNI	CCWGG	6 cut(s)	1334, 1594, 1698, 2182, 2836, 3000
BstNSI	RCATGY	4 cut(s)	519, 938, 1845, 2253
BstPAI	GACNNNNGTC	1 cut(s)	1632
BstSCI	CCNGG	6 cut(s)	1332, 1592, 1696, 2180, 2834, 2998
BstSFI	CTRYAG	2 cut(s)	946, 1488
BstSLI	GKGCMC	2 cut(s)	2525, 2976
BstUI	CGCG	2 cut(s)	12, 3154
BstV1I	GCAGC	5 cut(s)	93, 443, 1825, 2679, 3154
BstV2I	GAAGAC	1 cut(s)	1632
BstX2I	RGATCY	6 cut(s)	826, 897, 1144, 1270, 2177, 2546
BstYI	RGATCY	6 cut(s)	826, 897, 1144, 1270, 2177, 2546
Bsu15I	ATCGAT	1 cut(s)	1119
Bsu36I	CCTNAGG	2 cut(s)	1185, 2905
BsuI	GTATCC	1 cut(s)	2329
BsuRI	GGCC	9 cut(s)	524, 601, 859, 918, 1004, 1662, 2079, 2454, 2786
BsuTUI	ATCGAT	1 cut(s)	1119
BtgI	CCRYGG	2 cut(s)	205, 2700
BtgZI	GCGATG	1 cut(s)	2595
BtrI	CACGTC	1 cut(s)	1990
BtsCI	GGATG	7 cut(s)	525, 529, 664, 1474, 1585, 2092, 2557
BtsIMutI	CAGTG	5 cut(s)	465, 533, 1406, 1721, 2746
CciI	TCATGA	3 cut(s)	487, 886, 3085
CfoI	GCGC	2 cut(s)	3074, 3156
Cfr10I	RCCGGY	1 cut(s)	164
ClaI	ATCGAT	1 cut(s)	1119
CseI	GACGC	2 cut(s)	2310, 3134
Csp6I	GTAC	5 cut(s)	504, 1070, 1857, 1879, 2319
CviQI	GTAC	5 cut(s)	504, 1070, 1857, 1879, 2319
DraI	TTTAAA	1 cut(s)	879
DraIII	CACNNNGTG	1 cut(s)	539
DriI	GACNNNNNGTC	1 cut(s)	2064
EaeI	YGGCCR	2 cut(s)	522, 2784
Eam1104I	CTCTTC	9 cut(s)	57, 381, 918, 1587, 1773, 2001, 2435, 2477, 2852
Eam1105I	GACNNNNNGTC	1 cut(s)	2064
EarI	CTCTTC	9 cut(s)	57, 381, 918, 1587, 1773, 2001, 2435, 2477, 2852
EciI	GGCGGA	1 cut(s)	2085
Eco130I	CCWWGG	6 cut(s)	860, 2074, 2211, 2351, 2700, 3176
Eco31I	GGTCTC	1 cut(s)	1087
Eco47I	GGWCC	7 cut(s)	67, 678, 709, 1455, 1827, 1885, 2885
Eco57I	CTGAAG	6 cut(s)	365, 528, 767, 1043, 1794, 2571
Eco81I	CCTNAGG	2 cut(s)	1185, 2905
EcoNI	CCTNNNNNAGG	3 cut(s)	1022, 1184, 2904
EcoO109I	RGGNCCY	1 cut(s)	1885
EcoRI	GAATTC	2 cut(s)	928, 1175
EcoRII	CCWGG	6 cut(s)	1332, 1592, 1696, 2180, 2834, 2998
EcoT14I	CCWWGG	6 cut(s)	860, 2074, 2211, 2351, 2700, 3176
EcoT22I	ATGCAT	1 cut(s)	517
ErhI	CCWWGG	6 cut(s)	860, 2074, 2211, 2351, 2700, 3176
FalI	AAGNNNNNCTT	2 cut(s)	2741, 2773
FaqI	GGGAC	4 cut(s)	567, 799, 1393, 2444
FauI	CCCGC	3 cut(s)	30, 230, 2533
FbaI	TGATCA	2 cut(s)	3034, 3082
Fnu4HI	GCNGC	8 cut(s)	82, 211, 365, 432, 1839, 2668, 2930, 3143
FokI	GGATG	7 cut(s)	512, 516, 671, 1481, 1572, 2079, 2544
Fsp4HI	GCNGC	8 cut(s)	82, 211, 365, 432, 1839, 2668, 2930, 3143
FspBI	CTAG	5 cut(s)	1851, 2133, 2352, 2679, 2706
GlaI	GCGC	2 cut(s)	3073, 3155
GluI	GCNGC	8 cut(s)	82, 211, 365, 432, 1839, 2668, 2930, 3143
GsuI	CTGGAG	3 cut(s)	1602, 1894, 2857
HaeIII	GGCC	9 cut(s)	524, 601, 859, 918, 1004, 1662, 2079, 2454, 2786
HapII	CCGG	6 cut(s)	54, 78, 165, 234, 289, 2605
HgaI	GACGC	2 cut(s)	2310, 3134
HhaI	GCGC	2 cut(s)	3074, 3156
Hin6I	GCGC	2 cut(s)	3072, 3154
HinP1I	GCGC	2 cut(s)	3072, 3154
HincII	GTYRAC	2 cut(s)	1192, 1735
HindII	GTYRAC	2 cut(s)	1192, 1735
HindIII	AAGCTT	3 cut(s)	1494, 2447, 2489
HpaI	GTTAAC	1 cut(s)	1192
HpaII	CCGG	6 cut(s)	54, 78, 165, 234, 289, 2605
Hpy166II	GTNNAC	7 cut(s)	853, 1192, 1455, 1614, 1735, 2294, 3064
Hpy8I	GTNNAC	7 cut(s)	853, 1192, 1455, 1614, 1735, 2294, 3064
Hpy99I	CGWCG	9 cut(s)	116, 128, 182, 218, 263, 272, 383, 386, 2304
HpyCH4III	ACNGT	4 cut(s)	1098, 1716, 2534, 3049
HpyCH4IV	ACGT	7 cut(s)	424, 608, 754, 1633, 1855, 1989, 2065
HpyF10VI	GCNNNNNNNGC	5 cut(s)	521, 1410, 1493, 2424, 3151
HpySE526I	ACGT	7 cut(s)	424, 608, 754, 1633, 1855, 1989, 2065
HspAI	GCGC	2 cut(s)	3072, 3154
Kpn2I	TCCGGA	2 cut(s)	288, 2604
Ksp22I	TGATCA	2 cut(s)	3034, 3082
KspAI	GTTAAC	1 cut(s)	1192
LmnI	GCTCC	4 cut(s)	291, 1198, 1422, 2716
Lsp1109I	GCAGC	5 cut(s)	93, 443, 1825, 2679, 3154
LweI	GCATC	6 cut(s)	502, 649, 1333, 1459, 2254, 2566
MaeI	CTAG	5 cut(s)	1851, 2133, 2352, 2679, 2706
MaeII	ACGT	7 cut(s)	424, 608, 754, 1633, 1855, 1989, 2065
MaeIII	GTNAC	5 cut(s)	539, 2104, 2693, 2708, 2911
MfeI	CAATTG	1 cut(s)	2100
MflI	RGATCY	6 cut(s)	826, 897, 1144, 1270, 2177, 2546
MhlI	GDGCHC	2 cut(s)	2525, 2976
MlsI	TGGCCA	2 cut(s)	524, 2786
MluNI	TGGCCA	2 cut(s)	524, 2786
MlyI	GAGTC	8 cut(s)	27, 248, 251, 310, 1100, 1384, 1609, 1778
MmeI	TCCRAC	4 cut(s)	276, 282, 402, 1613
Mox20I	TGGCCA	2 cut(s)	524, 2786
Mph1103I	ATGCAT	1 cut(s)	517
MroI	TCCGGA	2 cut(s)	288, 2604
MroXI	GAANNNNTTC	1 cut(s)	425
MscI	TGGCCA	2 cut(s)	524, 2786
MseI	TTAA	9 cut(s)	666, 768, 842, 878, 1191, 1277, 1359, 2123, 2153
MslI	CAYNNNNRTG	3 cut(s)	1119, 2634, 2688
Msp20I	TGGCCA	2 cut(s)	524, 2786
MspA1I	CMGCKG	1 cut(s)	1487
MspI	CCGG	6 cut(s)	54, 78, 165, 234, 289, 2605
MspR9I	CCNGG	6 cut(s)	1334, 1594, 1698, 2182, 2836, 3000
MunI	CAATTG	1 cut(s)	2100
Mva1269I	GAATGC	2 cut(s)	973, 2661
MvaI	CCWGG	6 cut(s)	1334, 1594, 1698, 2182, 2836, 3000
MvnI	CGCG	2 cut(s)	12, 3154
MwoI	GCNNNNNNNGC	5 cut(s)	521, 1410, 1493, 2424, 3151
NcoI	CCATGG	1 cut(s)	2700
NlaIV	GGNNCC	8 cut(s)	828, 1272, 1424, 1552, 1663, 1886, 2718, 2864
NmuCI	GTSAC	2 cut(s)	539, 2708
NsiI	ATGCAT	1 cut(s)	517
NspI	RCATGY	4 cut(s)	519, 938, 1845, 2253
NspV	TTCGAA	1 cut(s)	2165
PagI	TCATGA	3 cut(s)	487, 886, 3085
PciI	ACATGT	2 cut(s)	934, 2249
PcsI	WCGNNNNNNNCGW	5 cut(s)	120, 213, 267, 390, 2296
PctI	GAATGC	2 cut(s)	973, 2661
PdmI	GAANNNNTTC	1 cut(s)	425
PfeI	GAWTC	6 cut(s)	248, 306, 590, 1076, 1315, 2504
PflMI	CCANNNNNTGG	2 cut(s)	1671, 2075
PfoI	TCCNGGA	3 cut(s)	1332, 2180, 2834
PkrI	GCNGC	8 cut(s)	83, 212, 366, 433, 1840, 2669, 2931, 3144
PleI	GAGTC	8 cut(s)	27, 248, 250, 309, 1100, 1384, 1609, 1778
PpsI	GAGTC	8 cut(s)	27, 248, 250, 309, 1100, 1384, 1609, 1778
PpuMI	RGGWCCY	1 cut(s)	1885
PscI	ACATGT	2 cut(s)	934, 2249
PshAI	GACNNNNGTC	1 cut(s)	1632
Psp1406I	AACGTT	1 cut(s)	424
Psp5II	RGGWCCY	1 cut(s)	1885
Psp6I	CCWGG	6 cut(s)	1332, 1592, 1696, 2180, 2834, 2998
PspGI	CCWGG	6 cut(s)	1332, 1592, 1696, 2180, 2834, 2998
PspN4I	GGNNCC	8 cut(s)	828, 1272, 1424, 1552, 1663, 1886, 2718, 2864
PspPPI	RGGWCCY	1 cut(s)	1885
PsuI	RGATCY	6 cut(s)	826, 897, 1144, 1270, 2177, 2546
PvuII	CAGCTG	1 cut(s)	1487
RsaI	GTAC	5 cut(s)	505, 1071, 1858, 1880, 2320
RsaNI	GTAC	5 cut(s)	504, 1070, 1857, 1879, 2319
RseI	CAYNNNNRTG	3 cut(s)	1119, 2634, 2688
SaqAI	TTAA	9 cut(s)	666, 768, 842, 878, 1191, 1277, 1359, 2123, 2153
SatI	GCNGC	8 cut(s)	82, 211, 365, 432, 1839, 2668, 2930, 3143
SchI	GAGTC	8 cut(s)	27, 248, 251, 310, 1100, 1384, 1609, 1778
ScrFI	CCNGG	6 cut(s)	1334, 1594, 1698, 2182, 2836, 3000
SduI	GDGCHC	2 cut(s)	2525, 2976
SfaNI	GCATC	6 cut(s)	502, 649, 1333, 1459, 2254, 2566
SfcI	CTRYAG	2 cut(s)	946, 1488
SfuI	TTCGAA	1 cut(s)	2165
SinI	GGWCC	7 cut(s)	67, 678, 709, 1455, 1827, 1885, 2885
SmiMI	CAYNNNNRTG	3 cut(s)	1119, 2634, 2688
SmlI	CTYRAG	1 cut(s)	1786
SmoI	CTYRAG	1 cut(s)	1786
SspI	AATATT	1 cut(s)	316
SspMI	CTAG	5 cut(s)	1851, 2133, 2352, 2679, 2706
StyD4I	CCNGG	6 cut(s)	1332, 1592, 1696, 2180, 2834, 2998
StyI	CCWWGG	6 cut(s)	860, 2074, 2211, 2351, 2700, 3176
TaaI	ACNGT	4 cut(s)	1098, 1716, 2534, 3049
TaiI	ACGT	7 cut(s)	427, 611, 757, 1636, 1858, 1992, 2068
TatI	WGTACW	1 cut(s)	1069
TauI	GCSGC	3 cut(s)	213, 367, 2932
TfiI	GAWTC	6 cut(s)	248, 306, 590, 1076, 1315, 2504
Tru1I	TTAA	9 cut(s)	666, 768, 842, 878, 1191, 1277, 1359, 2123, 2153
Tru9I	TTAA	9 cut(s)	666, 768, 842, 878, 1191, 1277, 1359, 2123, 2153
TscAI	CASTG	5 cut(s)	465, 540, 1406, 1721, 2746
TseFI	GTSAC	2 cut(s)	539, 2708
TseI	GCWGC	5 cut(s)	81, 431, 1838, 2667, 3142
Tsp45I	GTSAC	2 cut(s)	539, 2708
TspGWI	ACGGA	3 cut(s)	403, 1383, 1558
TspRI	CASTG	5 cut(s)	465, 540, 1406, 1721, 2746
Van91I	CCANNNNNTGG	2 cut(s)	1671, 2075
VpaK11BI	GGWCC	7 cut(s)	67, 678, 709, 1455, 1827, 1885, 2885
XagI	CCTNNNNNAGG	3 cut(s)	1022, 1184, 2904
XapI	RAATTY	4 cut(s)	928, 965, 1175, 2643
XceI	RCATGY	4 cut(s)	519, 938, 1845, 2253
XmaJI	CCTAGG	1 cut(s)	2351
XmnI	GAANNNNTTC	1 cut(s)	425
XspI	CTAG	5 cut(s)	1851, 2133, 2352, 2679, 2706
Zsp2I	ATGCAT	1 cut(s)	517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.