Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0002490

Physical Location & Seq

Genomic Coordinates Forward (+)

1421005 .. 1427953

Gene Structure 6949 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG019000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3135 bp

ATGTCTCCTCTCGCCGAGAACGACGAGCTTTCTTACTACGACGAACAAGACGACGAAGACGACGACGATGATGACGACGGCTTCAACGCCGACATCGAGGCCCTCCGCCGCGCCTGTATGCTCACCGGCAAAGACCCCGACGACATCACCACCAAAAACGACGACGAAAACCCTAGCAGCAACCAAAACGACGACGTAGACCTCTCCTCGGCTCCCAATTCCGACTCCGATTTCGACGAGGACCTGGAGCTGCTCCGCAAAATCAAGAGCCAATTCTCCAACACTTCTCTCAAGCCTCTTTCGCTGAAGCCTCTCTGTACTTTGCTTCCGCCTTCTGCCTCCGACGAGGAGGAGGACGACTACCAGACGCTGCTCGCCGTTCGGAAACGTTTCGCCGCCTACGAGAACGATACTCAGGAAAAAAGTGCAGAGCAGATTGATCCTTCCTGCAAATCAGTCGAGGAAACTTGCAATGAAGTATCTGGAACTGATGCTCATGAAAGGTTTCTTACTCTGGTCACCGATAATGAAGAGGGACAGCCTTCCACTTCCATTGAGTGGGTTCAGTCAGATTCTTGTGAGCCAACTCTGTTGCCAACCAAAAGTTCAGGGTTTCCAAAGTCTGCACTGGCTTTTCTGGATGCTATTAATAAGAATAGGTCCTGTCAGAAGTTTCTTCGAAGTAAGCTGATACAAATCCAAGCGAAAATTGAGGAGAACAACAAACTGAAGCAGCGTGTCAAAATCCTTAGAGACTTTCAAGCTCATTGCAAAAGACGAACAGGAGAGGCGCTGTCCCAAAAGAAGGATCCTCGTGTCCAGTTAATTTTAACGAAAAAGCCAAGGGCTGATTCAAAGGCTCATGACAGAGGTATCTCAGCTATGTCTTATGGCCCAGAAGAAAATTCACATGTTGCCAACTACAGAAAGGCATCGACAAAATTTCCACTTTCATTAGATCGAAAAAATTGGTCAGAGGTAGAAAAGAAAGATCTTCAAAATGGAATAAGACAGCAATTTCAGGAAATGGTGCTTCAATCTTCCGTAGATGATTCAAGTTATTCTGAGACACCTCATGGAGACTCGAATGACATTGATAAAATTTTGGCTTCAATCAAGGATCTCGAAATTACCCCATATAGCATTAGAGAGTTCCTGCCTAAGGTTAACTGGGAGCAGTTGGCTTCCATGTATGTTCCTGGTCGCTCTGGTGGAGAATGTGAAGCAAGCTTAATGTGTGTGATTACTTCTTGCAGGTGGTTGAACTGGGAGGATCCCTTAATCACTCATGGACCATGGACAACAGATGAGGATAAGATAATTCTGTATCTTGTCCAGAACAAGAATGGGGTCAATGATTGGAATAATATTGCAGAAGCAGTGGGGACTAACAGGACTCCATTTCAGTGCTTGGCACGCTACCAAAGGAGCCTAAATGCTTCTATACTGAAACGGGAGTGGACCAAGGATGAGGATGCAAAACTTGCTTCTGCTGTAGAAGCTTTTGGTGAGGGTAATTGGCAGTCTGTAGCTTCTGCTTTGAACGGACGAACTGGTACTCAATGCTCTAATAGATGGAAGAAATCACTTCATCCAACCAGGACAAGAGCAGGTAAGTGGACTCCAGAGGAAGACAAACGCCTGATAGTAGCTCAAATGCTTTTTGGGTCAAAAAGTTGGAATAAGACAGCTCAGTTTGTGCCAGGCCGAACTCAGGCACAATGCAGAGATAGATATGTCAACTCTTTAGAACCTTCTTTGAGGTGTGGTGAATGGACTGAAGAAGAGGACTCAAGGTTGATAGCAGCAATTGAAGAATATGGACATTGCTGGTCAAAAGTTGCTGCACGTGTGCCTCACCGGACTGATAATATGTGCTGGAGGAGATGGAAGGTGTTGTTTCCGGATGAAGTGCCCTTGCTCAGAGAAGAGAAAAGAATACGTAAGACTGCTCTCATCCGCAACTTTGTTGATCGGGAGAAAGAACGTCCAGCCCTTGGCCCTAATGATTTTCTTCTACAAGACGTTACCTCAATGAAAACTTTAACTTATCCTAGGAAGACGGGAGGATTAAGCCAAGTTCCAAAGAAGATTAAACCCAGGAGGCATAGAAATGATGCTCAACTTTGCTCTGAGGAAGAACCTGGGACAAGCAATTCTGAGGTTGAGACTTATGATGGGGAAGATGCCTCAAAGAAGAAGAAGAAGAAGAAAGTTCTTAAACAGCGTCAAGGAAGGCACAAAGACAATGAACCCACAGGAGACTGTGAGGCTGTTGTGCCTGTACCAAAGAAGATTAGACCCAGGAGGAATAGAAACAACGGTCAAATTCCTGGGATAAGCAATTCTGAGGTACGGACATGTGATGGGGATGATGGCCCAAAGAAGAAGAAAGTTCTTAAACAGCGTCACAGAAGGCACAAAGGCACTGAACTAACAGGAGAGTGTAAGGCTATTGTACCTGTTAGTAATGAGGATGATGCACACAAAGAACCCACAGAAATGTCTTGTTCAGATGCCCTGAAGAAGAAGAAAGTTCTTAAACATCGTCACAGAAAGCACAAAGGCACTGAACCAACAGGAGAGTGTAAGGCTATTGTACCTGTTAGTAATGAGGATGACGCACGCAAAGAACCCACAGCGATGTCTTATTCAGATCAAATCATAGGAACATCAGATGAAGATGATACTGTTTCTTACTATCTACATAAATCAAGGAAGAGAAAGCTTGAAGCTGATCTGGCTGTCCAGGAGTCCCCCTTCTACTGTAATAGGGATCGTGAAGCTTTAATGCAACATGAGCCAGCCATAGCTTGCAATAAACCTGGTCGACGAAAATTAGTCAGAGGGCAAAAGCTTGGCCTCCAAGAACCAATGAGGGGAGTGTTGAGACTTTGTCCAGGAAGTGATCACGAGACTGATGATCCTGTTGTGGCTTCCACAGGGAAAAAGAATTCAAAGAAGAGGCATGCTCAAACTACCAAAAGGCACGTCATTTGTAATGATCCCGATGCAGGAGATCTACCTAAACAAGAGGAGGTCACAATCAAATCTGGGAAGGAACAAGTGAGCGCTGGTGCAGACAGCAGCGATGATATAACACTTGCTTGTTTTCTTAATAGATTAAAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0048285 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051225 GO:0051252 GO:0060255 GO:0065007 GO:0070925 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0140014 GO:0140110 GO:1901363 GO:1902850 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

1044

Amino Acids

118.3

Weight (kDa)

7.06

Isoelectric Point (pI)

50.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	431 - 476	9e-10	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	433 - 492	9.8e-14	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	484 - 528	7e-14	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	487 - 536	2.1e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	538 - 581	4.6e-12	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	540 - 596	1.3e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	590 - 631	1e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	592 - 635	3.1e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002490)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18100 AT3G18100 AT3G18100 AT3G18100
fragaria_vesca	FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070
malus_domestica	MD14G1233900.v1.1
prunus_persica	Prupe.5G230100_v2.0.a1 Prupe.5G230100_v2.0.a1
pyrus_communis	pycom14g19490
rosa_chinensis	RchiOBHm_Chr7g0178781 RchiOBHm_Chr7g0230201
rosa_laevigata	RLG00000005416
rosa_multiflora	Rmu_sc0001901.1_g000001 Rmu_sc0002822.1_g000027 Rmu_sc0004110.1_g000007 Rmu_sc0004110.1_g000008 Rmu_sc0015029.1_g000002 Rmu_sc0025325.1_g000009
rosa_roxburghii	Rroxscaffold_3G00230300 Rroxscaffold_3G00274620
rosa_rugosa	Rorug06G0419400 Rorug06G0419500 Rorug06G0419600
rosa_samantha	Rh7AG018900 Rh7AG408900 Rh7AG409000 Rh7BG018200 Rh7BG388800 Rh7CG019000 Rh7DG018800 Rh7DG406800
rosa_wichuraiana	Rw0G022580 Rw0G022590 Rw7G001530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1245
Acc36I	ACCTGC	2 cut(s)	1245, 1601
AccB7I	CCANNNNNTGG	2 cut(s)	558, 1997
AccI	GTMKAC	2 cut(s)	198, 2830
AccII	CGCG	1 cut(s)	111
AccIII	TCCGGA	1 cut(s)	1903
AciI	CCGC	6 cut(s)	106, 109, 256, 329, 396, 1960
AclI	AACGTT	1 cut(s)	388
AclWI	GGATC	9 cut(s)	434, 803, 816, 1128, 1268, 1281, 2784, 2918, 2999
AcsI	RAATTY	5 cut(s)	904, 941, 1101, 2328, 2953
AcuI	CTGAAG	4 cut(s)	326, 749, 1800, 2543
AcvI	CACGTG	1 cut(s)	1850
AfaI	GTAC	6 cut(s)	319, 1558, 2286, 2355, 2460, 2601
AfeI	AGCGCT	1 cut(s)	3073
AfiI	CCNNNNNNNGG	8 cut(s)	208, 558, 805, 1162, 1714, 1997, 2879, 3014
AflIII	ACRYGT	3 cut(s)	910, 1849, 2360
AjiI	CACGTC	1 cut(s)	2992
AjuI	GAANNNNNNNTTGG	4 cut(s)	589, 621, 835, 867
Alw26I	GTCTC	8 cut(s)	9, 747, 1061, 1074, 2162, 2256, 2884, 2909
AlwI	GGATC	9 cut(s)	434, 803, 816, 1128, 1268, 1281, 2784, 2918, 2999
AlwNI	CAGNNNCTG	1 cut(s)	370
Aor13HI	TCCGGA	1 cut(s)	1903
Aor51HI	AGCGCT	1 cut(s)	3073
AoxI	GGCC	6 cut(s)	99, 892, 1705, 1999, 2377, 2860
ApeKI	GCWGC	7 cut(s)	177, 250, 370, 733, 1805, 1844, 3087
ApoI	RAATTY	5 cut(s)	904, 941, 1101, 2328, 2953
ArsI	GACNNNNNNTTYG	4 cut(s)	215, 247, 2976, 3008
AseI	ATTAAT	1 cut(s)	648
Asp700I	GAANNNNTTC	2 cut(s)	389, 504
AspA2I	CCTAGG	1 cut(s)	2054
AspLEI	GCGC	3 cut(s)	113, 793, 3074
AspS9I	GGNCC	8 cut(s)	100, 241, 660, 893, 1292, 1461, 2000, 2378
AsuHPI	GGTGA	6 cut(s)	115, 139, 511, 1520, 1781, 1850
AsuII	TTCGAA	1 cut(s)	679
AvaII	GGWCC	4 cut(s)	241, 660, 1292, 1461
AvrII	CCTAGG	1 cut(s)	2054
AxyI	CCTNAGG	1 cut(s)	1161
BaeGI	GKGCMC	1 cut(s)	1917
BaeI	ACNNNNGTAYC	2 cut(s)	856, 889
BamHI	GGATCC	2 cut(s)	808, 1273
BauI	CACGAG	2 cut(s)	813, 2912
BbrPI	CACGTG	1 cut(s)	1850
BbsI	GAAGAC	3 cut(s)	63, 1638, 2066
BbvI	GCAGC	7 cut(s)	189, 237, 357, 745, 1817, 1831, 3099
BccI	CCATC	5 cut(s)	1569, 1881, 2171, 2360, 2369
BceAI	ACGGC	2 cut(s)	94, 362
BcgI	CGANNNNNNTGC	2 cut(s)	439, 473
BclI	TGATCA	1 cut(s)	2908
BcoDI	GTCTC	8 cut(s)	9, 747, 1061, 1074, 2162, 2256, 2884, 2909
BfaI	CTAG	2 cut(s)	174, 2055
BfmI	CTRYAG	3 cut(s)	922, 1494, 1527
BfoI	RGCGCY	2 cut(s)	794, 3075
BfuAI	ACCTGC	2 cut(s)	1245, 1601
BglII	AGATCT	2 cut(s)	991, 3019
BisI	GCNGC	9 cut(s)	109, 178, 251, 371, 396, 734, 1806, 1845, 3088
BlnI	CCTAGG	1 cut(s)	2054
BlsI	GCNGC	9 cut(s)	110, 179, 252, 372, 397, 735, 1807, 1846, 3089
Bme18I	GGWCC	4 cut(s)	241, 660, 1292, 1461
BmgBI	CACGTC	1 cut(s)	2992
BmgT120I	GGNCC	8 cut(s)	100, 241, 660, 893, 1292, 1461, 2000, 2378
BmiI	GGNNCC	4 cut(s)	213, 810, 1275, 1430
BmrI	ACTGGG	2 cut(s)	1180, 1276
BmsI	GCATC	9 cut(s)	481, 631, 941, 1465, 2107, 2176, 2470, 2506, 3001
BmuI	ACTGGG	2 cut(s)	1180, 1276
BpiI	GAAGAC	3 cut(s)	63, 1638, 2066
BplI	GAGNNNNNCTC	2 cut(s)	2956, 2988
BpmI	CTGGAG	3 cut(s)	266, 1608, 1900
Bpu14I	TTCGAA	1 cut(s)	679
BpuEI	CTTGAG	2 cut(s)	275, 1777
BsaAI	YACGTR	2 cut(s)	1850, 1943
BsaBI	GATNNNNATC	1 cut(s)	695
BsaWI	WCCGGW	2 cut(s)	1860, 1903
Bsc4I	CCNNNNNNNGG	8 cut(s)	208, 558, 805, 1162, 1714, 1997, 2879, 3014
Bse118I	RCCGGY	1 cut(s)	125
Bse1I	ACTGG	5 cut(s)	633, 820, 1175, 1271, 1558
Bse21I	CCTNAGG	1 cut(s)	1161
Bse3DI	GCAATG	3 cut(s)	478, 766, 1825
Bse8I	GATNNNNATC	1 cut(s)	695
BseAI	TCCGGA	1 cut(s)	1903
BseGI	GGATG	9 cut(s)	646, 1474, 1480, 1591, 1912, 1956, 2377, 2482, 2623
BseJI	GATNNNNATC	1 cut(s)	695
BseLI	CCNNNNNNNGG	8 cut(s)	208, 558, 805, 1162, 1714, 1997, 2879, 3014
BseMI	GCAATG	3 cut(s)	478, 766, 1825
BseMII	CTCAG	9 cut(s)	428, 891, 1056, 1706, 1727, 1936, 2124, 2151, 2340
BseNI	ACTGG	5 cut(s)	633, 820, 1175, 1271, 1558
BseRI	GAGGAG	6 cut(s)	196, 362, 365, 728, 1897, 3050
BseSI	GKGCMC	1 cut(s)	1917
BseXI	GCAGC	7 cut(s)	189, 237, 357, 745, 1817, 1831, 3099
BsgI	GTGCAG	4 cut(s)	447, 609, 1830, 3099
Bsh1236I	CGCG	1 cut(s)	111
BshFI	GGCC	6 cut(s)	101, 894, 1707, 2001, 2379, 2862
BsiSI	CCGG	3 cut(s)	126, 1861, 1904
BslFI	GGGAC	5 cut(s)	549, 781, 1399, 2161, 2740
BslI	CCNNNNNNNGG	8 cut(s)	208, 558, 805, 1162, 1714, 1997, 2879, 3014
BsmAI	GTCTC	8 cut(s)	9, 747, 1061, 1074, 2162, 2256, 2884, 2909
BsmFI	GGGAC	5 cut(s)	549, 781, 1399, 2161, 2740
BsnI	GGCC	6 cut(s)	101, 894, 1707, 2001, 2379, 2862
Bsp119I	TTCGAA	1 cut(s)	679
Bsp1286I	GDGCHC	1 cut(s)	1917
Bsp13I	TCCGGA	1 cut(s)	1903
Bsp19I	CCATGG	1 cut(s)	1295
BspACI	CCGC	6 cut(s)	106, 109, 256, 329, 396, 1960
BspANI	GGCC	6 cut(s)	101, 894, 1707, 2001, 2379, 2862
BspCNI	CTCAG	9 cut(s)	427, 890, 1057, 1705, 1726, 1935, 2125, 2152, 2341
BspEI	TCCGGA	1 cut(s)	1903
BspFNI	CGCG	1 cut(s)	111
BspHI	TCATGA	2 cut(s)	496, 862
BspLI	GGNNCC	4 cut(s)	213, 810, 1275, 1430
BspMI	ACCTGC	2 cut(s)	1245, 1601
BspPI	GGATC	9 cut(s)	434, 803, 816, 1128, 1268, 1281, 2784, 2918, 2999
BspT104I	TTCGAA	1 cut(s)	679
BsrDI	GCAATG	3 cut(s)	478, 766, 1825
BsrFI	RCCGGY	1 cut(s)	125
BsrI	ACTGG	5 cut(s)	633, 820, 1175, 1271, 1558
BssAI	RCCGGY	1 cut(s)	125
BssSI	CACGAG	2 cut(s)	813, 2912
BssT1I	CCWWGG	5 cut(s)	842, 1295, 1464, 1996, 2054
Bst2BI	CACGAG	2 cut(s)	813, 2912
Bst4CI	ACNGT	4 cut(s)	2267, 2324, 2692, 2768
Bst6I	CTCTTC	5 cut(s)	525, 1779, 1923, 2714, 2957
BstAPI	GCANNNNNTGC	1 cut(s)	1484
BstBAI	YACGTR	2 cut(s)	1850, 1943
BstBI	TTCGAA	1 cut(s)	679
BstC8I	GCNNGC	7 cut(s)	375, 1228, 1417, 2626, 2805, 2815, 2970
BstDSI	CCRYGG	1 cut(s)	1295
BstEII	GGTNACC	1 cut(s)	517
BstENI	CCTNNNNNAGG	1 cut(s)	1160
BstF5I	GGATG	9 cut(s)	646, 1474, 1480, 1591, 1912, 1956, 2377, 2482, 2623
BstFNI	CGCG	1 cut(s)	111
BstH2I	RGCGCY	2 cut(s)	794, 3075
BstHHI	GCGC	3 cut(s)	113, 793, 3074
BstMAI	GTCTC	8 cut(s)	9, 747, 1061, 1074, 2162, 2256, 2884, 2909
BstMWI	GCNNNNNNNGC	6 cut(s)	301, 1416, 1484, 1499, 2741, 2800
BstNSI	RCATGY	3 cut(s)	914, 2364, 2972
BstPI	GGTNACC	1 cut(s)	517
BstSFI	CTRYAG	3 cut(s)	922, 1494, 1527
BstSLI	GKGCMC	1 cut(s)	1917
BstSNI	TACGTA	1 cut(s)	1943
BstUI	CGCG	1 cut(s)	111
BstV1I	GCAGC	7 cut(s)	189, 237, 357, 745, 1817, 1831, 3099
BstV2I	GAAGAC	3 cut(s)	63, 1638, 2066
BstX2I	RGATCY	5 cut(s)	808, 991, 1120, 1273, 3019
BstYI	RGATCY	5 cut(s)	808, 991, 1120, 1273, 3019
Bsu36I	CCTNAGG	1 cut(s)	1161
BsuRI	GGCC	6 cut(s)	101, 894, 1707, 2001, 2379, 2862
BtgI	CCRYGG	1 cut(s)	1295
BtgZI	GCGATG	2 cut(s)	2657, 3105
BtrI	CACGTC	1 cut(s)	2992
BtsCI	GGATG	9 cut(s)	646, 1474, 1480, 1591, 1912, 1956, 2377, 2482, 2623
BtsI	GCAGTG	1 cut(s)	1386
BtsIMutI	CAGTG	5 cut(s)	626, 1386, 1412, 2427, 2568
BveI	ACCTGC	2 cut(s)	1245, 1601
Cac8I	GCNNGC	7 cut(s)	375, 1228, 1417, 2626, 2805, 2815, 2970
CaiI	CAGNNNCTG	1 cut(s)	370
CciI	TCATGA	2 cut(s)	496, 862
CfoI	GCGC	3 cut(s)	113, 793, 3074
Cfr10I	RCCGGY	1 cut(s)	125
Cfr13I	GGNCC	8 cut(s)	100, 241, 660, 893, 1292, 1461, 2000, 2378
CseI	GACGC	4 cut(s)	376, 2216, 2396, 2630
CsiI	ACCWGGT	1 cut(s)	2824
Csp6I	GTAC	6 cut(s)	318, 1557, 2285, 2354, 2459, 2600
CspCI	CAANNNNNGTGG	2 cut(s)	535, 570
CviQI	GTAC	6 cut(s)	318, 1557, 2285, 2354, 2459, 2600
Eam1104I	CTCTTC	5 cut(s)	525, 1779, 1923, 2714, 2957
EarI	CTCTTC	5 cut(s)	525, 1779, 1923, 2714, 2957
EciI	GGCGGA	2 cut(s)	95, 318
Eco105I	TACGTA	1 cut(s)	1943
Eco130I	CCWWGG	5 cut(s)	842, 1295, 1464, 1996, 2054
Eco47I	GGWCC	4 cut(s)	241, 660, 1292, 1461
Eco47III	AGCGCT	1 cut(s)	3073
Eco57I	CTGAAG	4 cut(s)	326, 749, 1800, 2543
Eco72I	CACGTG	1 cut(s)	1850
Eco81I	CCTNAGG	1 cut(s)	1161
Eco91I	GGTNACC	1 cut(s)	517
EcoNI	CCTNNNNNAGG	1 cut(s)	1160
EcoO109I	RGGNCCY	3 cut(s)	100, 241, 660
EcoO65I	GGTNACC	1 cut(s)	517
EcoRI	GAATTC	1 cut(s)	2953
EcoT14I	CCWWGG	5 cut(s)	842, 1295, 1464, 1996, 2054
ErhI	CCWWGG	5 cut(s)	842, 1295, 1464, 1996, 2054
FaqI	GGGAC	5 cut(s)	549, 781, 1399, 2161, 2740
FbaI	TGATCA	1 cut(s)	2908
FblI	GTMKAC	2 cut(s)	198, 2830
Fnu4HI	GCNGC	9 cut(s)	109, 178, 251, 371, 396, 734, 1806, 1845, 3088
FokI	GGATG	9 cut(s)	653, 1481, 1487, 1578, 1919, 1943, 2384, 2489, 2630
Fsp4HI	GCNGC	9 cut(s)	109, 178, 251, 371, 396, 734, 1806, 1845, 3088
FspBI	CTAG	2 cut(s)	174, 2055
GlaI	GCGC	3 cut(s)	112, 792, 3073
GluI	GCNGC	9 cut(s)	109, 178, 251, 371, 396, 734, 1806, 1845, 3088
GsuI	CTGGAG	3 cut(s)	266, 1608, 1900
HaeII	RGCGCY	2 cut(s)	794, 3075
HaeIII	GGCC	6 cut(s)	101, 894, 1707, 2001, 2379, 2862
HapII	CCGG	3 cut(s)	126, 1861, 1904
HgaI	GACGC	4 cut(s)	376, 2216, 2396, 2630
HhaI	GCGC	3 cut(s)	113, 793, 3074
Hin6I	GCGC	3 cut(s)	111, 791, 3072
HinP1I	GCGC	3 cut(s)	111, 791, 3072
HincII	GTYRAC	3 cut(s)	1168, 1741, 2831
HindII	GTYRAC	3 cut(s)	1168, 1741, 2831
HindIII	AAGCTT	5 cut(s)	1228, 1500, 2726, 2784, 2855
HinfI	GANTC	9 cut(s)	224, 572, 851, 1052, 1082, 1396, 1621, 1790, 2753
HpaI	GTTAAC	1 cut(s)	1168
HpaII	CCGG	3 cut(s)	126, 1861, 1904
HphI	GGTGA	6 cut(s)	115, 139, 511, 1520, 1781, 1850
Hpy166II	GTNNAC	6 cut(s)	199, 1168, 1461, 1620, 1741, 2831
Hpy8I	GTNNAC	6 cut(s)	199, 1168, 1461, 1620, 1741, 2831
HpyCH4III	ACNGT	4 cut(s)	2267, 2324, 2692, 2768
HpyCH4IV	ACGT	7 cut(s)	195, 388, 1849, 1942, 1987, 2025, 2991
HpyF10VI	GCNNNNNNNGC	6 cut(s)	301, 1416, 1484, 1499, 2741, 2800
HpySE526I	ACGT	7 cut(s)	195, 388, 1849, 1942, 1987, 2025, 2991
HspAI	GCGC	3 cut(s)	111, 791, 3072
Kpn2I	TCCGGA	1 cut(s)	1903
Ksp22I	TGATCA	1 cut(s)	2908
KspAI	GTTAAC	1 cut(s)	1168
LmnI	GCTCC	5 cut(s)	217, 247, 258, 1174, 1428
Lsp1109I	GCAGC	7 cut(s)	189, 237, 357, 745, 1817, 1831, 3099
LweI	GCATC	9 cut(s)	481, 631, 941, 1465, 2107, 2176, 2470, 2506, 3001
MabI	ACCWGGT	1 cut(s)	2824
MaeI	CTAG	2 cut(s)	174, 2055
MaeII	ACGT	7 cut(s)	195, 388, 1849, 1942, 1987, 2025, 2991
MaeIII	GTNAC	5 cut(s)	517, 2026, 2408, 2549, 3040
MfeI	CAATTG	1 cut(s)	1809
MflI	RGATCY	5 cut(s)	808, 991, 1120, 1273, 3019
MhlI	GDGCHC	1 cut(s)	1917
MlyI	GAGTC	6 cut(s)	218, 1076, 1390, 1615, 1784, 2762
MmeI	TCCRAC	5 cut(s)	246, 303, 366, 1619, 1658
MroI	TCCGGA	1 cut(s)	1903
MroXI	GAANNNNTTC	2 cut(s)	389, 504
MslI	CAYNNNNRTG	4 cut(s)	1405, 2112, 2501, 2642
MspI	CCGG	3 cut(s)	126, 1861, 1904
MunI	CAATTG	1 cut(s)	1809
MvnI	CGCG	1 cut(s)	111
MwoI	GCNNNNNNNGC	6 cut(s)	301, 1416, 1484, 1499, 2741, 2800
NcoI	CCATGG	1 cut(s)	1295
NlaIV	GGNNCC	4 cut(s)	213, 810, 1275, 1430
NmeAIII	GCCGAG	2 cut(s)	40, 188
NmuCI	GTSAC	4 cut(s)	517, 2408, 2549, 3040
NspI	RCATGY	3 cut(s)	914, 2364, 2972
NspV	TTCGAA	1 cut(s)	679
PaeI	GCATGC	1 cut(s)	2972
PagI	TCATGA	2 cut(s)	496, 862
PaqCI	CACCTGC	1 cut(s)	1245
PciI	ACATGT	2 cut(s)	910, 2360
PcsI	WCGNNNNNNNCGW	7 cut(s)	18, 48, 57, 60, 72, 93, 399
PdmI	GAANNNNTTC	2 cut(s)	389, 504
PfeI	GAWTC	3 cut(s)	572, 851, 1052
PflFI	GACNNNGTC	1 cut(s)	2895
PflMI	CCANNNNNTGG	2 cut(s)	558, 1997
PfoI	TCCNGGA	2 cut(s)	2748, 2899
PkrI	GCNGC	9 cut(s)	110, 179, 252, 372, 397, 735, 1807, 1846, 3089
PleI	GAGTC	6 cut(s)	218, 1076, 1390, 1615, 1784, 2761
PmaCI	CACGTG	1 cut(s)	1850
PmlI	CACGTG	1 cut(s)	1850
PpsI	GAGTC	6 cut(s)	218, 1076, 1390, 1615, 1784, 2761
Ppu21I	YACGTR	2 cut(s)	1850, 1943
PpuMI	RGGWCCY	2 cut(s)	241, 660
PscI	ACATGT	2 cut(s)	910, 2360
PshBI	ATTAAT	1 cut(s)	648
Psp1406I	AACGTT	1 cut(s)	388
Psp5II	RGGWCCY	2 cut(s)	241, 660
PspCI	CACGTG	1 cut(s)	1850
PspEI	GGTNACC	1 cut(s)	517
PspN4I	GGNNCC	4 cut(s)	213, 810, 1275, 1430
PspPI	GGNCC	8 cut(s)	100, 241, 660, 893, 1292, 1461, 2000, 2378
PspPPI	RGGWCCY	2 cut(s)	241, 660
PstNI	CAGNNNCTG	1 cut(s)	370
PsuI	RGATCY	5 cut(s)	808, 991, 1120, 1273, 3019
PsyI	GACNNNGTC	1 cut(s)	2895
RsaI	GTAC	6 cut(s)	319, 1558, 2286, 2355, 2460, 2601
RsaNI	GTAC	6 cut(s)	318, 1557, 2285, 2354, 2459, 2600
RseI	CAYNNNNRTG	4 cut(s)	1405, 2112, 2501, 2642
SalI	GTCGAC	1 cut(s)	2829
SatI	GCNGC	9 cut(s)	109, 178, 251, 371, 396, 734, 1806, 1845, 3088
Sau96I	GGNCC	8 cut(s)	100, 241, 660, 893, 1292, 1461, 2000, 2378
SchI	GAGTC	6 cut(s)	218, 1076, 1390, 1615, 1784, 2762
SduI	GDGCHC	1 cut(s)	1917
SexAI	ACCWGGT	1 cut(s)	2824
SfaNI	GCATC	9 cut(s)	481, 631, 941, 1465, 2107, 2176, 2470, 2506, 3001
SfcI	CTRYAG	3 cut(s)	922, 1494, 1527
SfuI	TTCGAA	1 cut(s)	679
SinI	GGWCC	4 cut(s)	241, 660, 1292, 1461
SmiMI	CAYNNNNRTG	4 cut(s)	1405, 2112, 2501, 2642
SmlI	CTYRAG	2 cut(s)	290, 1792
SmoI	CTYRAG	2 cut(s)	290, 1792
SnaBI	TACGTA	1 cut(s)	1943
SphI	GCATGC	1 cut(s)	2972
SsiI	CCGC	6 cut(s)	106, 109, 256, 329, 396, 1960
SspI	AATATT	1 cut(s)	1369
SspMI	CTAG	2 cut(s)	174, 2055
StyI	CCWWGG	5 cut(s)	842, 1295, 1464, 1996, 2054
TaaI	ACNGT	4 cut(s)	2267, 2324, 2692, 2768
TaiI	ACGT	7 cut(s)	198, 391, 1852, 1945, 1990, 2028, 2994
TaqI	TCGA	9 cut(s)	96, 234, 459, 679, 935, 961, 1085, 1125, 2830
TatI	WGTACW	1 cut(s)	317
TauI	GCSGC	2 cut(s)	111, 398
TfiI	GAWTC	3 cut(s)	572, 851, 1052
TscAI	CASTG	5 cut(s)	633, 1386, 1412, 2434, 2575
TseFI	GTSAC	4 cut(s)	517, 2408, 2549, 3040
TseI	GCWGC	7 cut(s)	177, 250, 370, 733, 1805, 1844, 3087
Tsp45I	GTSAC	4 cut(s)	517, 2408, 2549, 3040
TspDTI	ATGAA	9 cut(s)	489, 513, 543, 942, 1580, 1923, 2051, 2265, 2694
TspGWI	ACGGA	3 cut(s)	1033, 1560, 2371
TspRI	CASTG	5 cut(s)	633, 1386, 1412, 2434, 2575
Tth111I	GACNNNGTC	1 cut(s)	2895
Van91I	CCANNNNNTGG	2 cut(s)	558, 1997
VpaK11BI	GGWCC	4 cut(s)	241, 660, 1292, 1461
VspI	ATTAAT	1 cut(s)	648
XagI	CCTNNNNNAGG	1 cut(s)	1160
XapI	RAATTY	5 cut(s)	904, 941, 1101, 2328, 2953
XceI	RCATGY	3 cut(s)	914, 2364, 2972
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1343
XmaJI	CCTAGG	1 cut(s)	2054
XmiI	GTMKAC	2 cut(s)	198, 2830
XmnI	GAANNNNTTC	2 cut(s)	389, 504
XspI	CTAG	2 cut(s)	174, 2055

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.