Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0002490

Physical Location & Seq

Genomic Coordinates Forward (+)

1264901 .. 1271938

Gene Structure 7038 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG018900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3168 bp

ATGTCTCCTCTCGCCGAGAACGACGAGCTTTCTTACTACGACGACGACGACGACGACGACGACGATGACGACGGCTTCAACGCCGACATCGAGGCCCTCCGCCGCGCCTGTATGCTCACCGGCAAAGACCCCGACGACATCACCACCAAAAATGACGACGAAAACCCTAGCAGCAACCAAAACGACGACGTAGACCTCTCCTCGGCTCCCAATTCCGACTCCGATTTCGACGAGGACCTCGAGCTGCTCCGCAAAATCAAGAGCCAATTCTCCAACACTTCTCTCAAGCCTCTTTCGCTGAAGCCTCTCTGTACTTTGCTTCCGCCTTCTGCCTCCGACGAGGAGGAGGACGACTACCAGACGCTGCTCGCCGTTCGGAAACGTTTCGCCGCCTACGAGAACGATACTCATGAAAAAAGTGCAGAGCAGATTGATCCTTCCTGCAAATCAGTTGAGGAAACTTGCAATGAAGTATCTGGAACTGATGCTCATGAAAGGTTTCTTACTCTGGTCACCGATAATGAAGAGGGACAGCCTTCCACTTCCGTTGAGTGGGTTCAGTCAGATTCTTGTGAGCCAACTCTGTTGCCAACCAAAAGTTCAGCGTTCCCAAAGTCTGCACTGGCTTTTCTGGATGCTATTAATAAGAATAGGTCCTGTCAGAAGTTTCTTCGAAGTAAGCTAATACAAATCCAAGCGAAAATTGAGGAGAACAACAAACTGAAGCAGCGTGTCAAAATCCTTAGAGACTTTCAAGCTCATTGCAAAAGACGAACAGGAGAGGCGCTGTCCCAAAAGAAGGATCCTCGTGTCCAGTTAATTTTAACGAAAAAGCCAAGGGCTGATTCAAAGGCTCATGACAGAGCTATCTCAGCTATGTCTTATGGCCCAGAAGAAAATTCACATGTTGCCAACTACAGAAAGGCATCAACAAAATTTCCACTTTCATTAGATCGAAAAAATTGGTCAGAGGTAGAAAAGAAAGATCTTCAAAATGGAATAAGACAGCAATTTCAGGAAATGGTGCTTCAATCTTCCGTAGATGATTCAAGTTATTCTGAGACACCTGATGGAGACTCGAATGACATTGATAAAATTTTGGCTTCAATCAAGGATCTCGAAATTACCCCATATAGCATTAGAGAGTTCCTGCCTAAGGTTAACTGGGAGCAGTTGGCTTCCATGTATGTTCCTGGTCGCTCTGGTGGAGAATGTGAAGCAAGCTTAATGTGTGTGATTACTTCTTGCAGGTGGTTGAACTGGGAGGATCCCTTAATCAGTCATGGACCGTGGACAACAGATGAGGATAAGACGATTCTGTATCTTGTCCAGAAGAAGAATGGGGTCAATGATTGGAATAATATTGCAGAAGCAGTGGGGACTAACAGGACTCCATTTCAGTGCTTGGCACGCTACCAAAGGAGCCTAAATGCTTCTATACTGAAACGGGAGTGGACCAAGGATGAGGATGCAAAACTTGCTTCTGCTGTAGAAGCTTTTGGTGAGGGTAATTGGCAGTCTGTAGCTTCTGCTTTGAACGGACGAACTGGTACTCAATGCTCTAATAGATGGAAGAAATCACTTCATCCAACCAGGACAAGAGCAGGTAAGTGGACTCCAGAGGAAGACAAACGCCTGATAGTAGCTCAAATGCTTTTTGGGTCAAAAAGTTGGAATAAGACAGCTCAGTTTGTGCCAGGCCGAACTCAGGCACAATGCAGAGATAGATATGTCAACTCTTTAGAACCTTCTTTGAGGTGTGGTGAATGGACTGAAGAAGAGGACTCAAGGTTGATAGCAGCAATTGAAGAATATGGACATTGCTGGTCAAAAGTTGCTGCATGTGTGCCTCACCGGACTGATAATATGTGCTGGAGGAGATGGAAGGTGTTGTTTCCGGATGAAGTGCCCTTGCTCAGAGAAGAGAAAAGAATACGTAAGACTGCTCTCATCCGCAACTTTGTTGATCGGGAGAAAGAACGTCCAGCCCTTGGCCCTAATGATTTTCTTCTACAAGACGTTACCTCAATGAAAACTTTAACTTATCCTAGGAAGACGGGAGGATTAAGCCAAGTTCCAAAGAAGATTAAACCCAGGAGGCATAGAAACGATGCTCAACTTTGCTCTGAGGAAGAACCTGGGACAAGCAATTCTGAGGTTGAGACTTATGATGGGGAAGATGCCTCAAAGAAGAAGAAGAAGAAGAAAGTTCTTAAACAGCGTCAAAGAAGGCACAAAGACAATGAACCCACAGGAGACTGTGCGGCTGTTGTGCCTGTACCAAAGAAGATTAGACCCAGGAGGAATAGAAACAACGGTCAAATTCCTGGGATAAGCAATTCTGAGGTACGGACATGTGATGGGGATGATGGCCCGAAGAAGAAGAAAGTTCTTAAACAGCGTCACAGAAGGCACAAAGGCACTGAACTAACAGGAGAGTGTACGGCTATTGTACCTGTTAGTAATGAGGATGACGCACACAAAGAACCCACAGAAATGTCTTGTTCAGATGCCCTGAAGAAGAAGAAAGTTCTTAAACATCGTCACAGAAAGCACAGAGGCACTGAACCAACAGGAGAGTGTAAGGCTATTGTACCTGGTAGTAATGAGGATGACGCACGCAAAGAACCCACAGCGATGTCTTATTCAGATCAAATCATAGGAACATCAGATGAAGATGATACTGTTTCTTACTATCTACATAAATCAAGGAAGAGAAAGCTTGAAGCTGACCTGGCTGTCCAGGAGTCCCCCTTCTACTGTATAAGGGATCGTGAAGCTTTAATGCAACATGAGCCAGCCATAGCTTGCAATAAACCTGGTCGACGAAAATTAGTCAGAGGGCAAAAGCTTGGCCTCCAAGAACCAATGAGGGGAGTGTTGAGAATTTGTCCGGGAAGTGATCATGAGACTGGTGATCCTGTTGTGGCTTCCACGGGGAAAAAGAATTCAAAGAAGAGGCATGCTCAAACTACCAAACGGCACGTCATTTGTAATGATCACGATGCAGGAGATCTACCTAAACAAGAGGAGGTCACAATCAAATCTGGGAAGGAACAAGTGAGCGCTGGTGCAGACAGCGGCGATGATATAACACTTGCTTGTTTTCTTAATAGATTAAAGAAGCGACGTGAATCTGGCAGAGGAGATATTCAGATGCCGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0048285 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051225 GO:0051252 GO:0060255 GO:0065007 GO:0070925 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0140014 GO:0140110 GO:1901363 GO:1902850 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

1055

Amino Acids

119.45

Weight (kDa)

7.82

Isoelectric Point (pI)

51.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	429 - 474	5.1e-10	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	431 - 487	1.9e-12	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	482 - 526	7e-14	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	485 - 534	2.1e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	536 - 579	4.6e-12	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	538 - 594	1.3e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	588 - 629	1e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	590 - 633	2.3e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002490)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18100 AT3G18100 AT3G18100 AT3G18100
fragaria_vesca	FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070
malus_domestica	MD14G1233900.v1.1
prunus_persica	Prupe.5G230100_v2.0.a1 Prupe.5G230100_v2.0.a1
pyrus_communis	pycom14g19490
rosa_chinensis	RchiOBHm_Chr7g0178781 RchiOBHm_Chr7g0230201
rosa_laevigata	RLG00000005416
rosa_multiflora	Rmu_sc0001901.1_g000001 Rmu_sc0002822.1_g000027 Rmu_sc0004110.1_g000007 Rmu_sc0004110.1_g000008 Rmu_sc0015029.1_g000002 Rmu_sc0025325.1_g000009
rosa_roxburghii	Rroxscaffold_3G00230300 Rroxscaffold_3G00274620
rosa_rugosa	Rorug06G0419400 Rorug06G0419500 Rorug06G0419600
rosa_samantha	Rh7AG018900 Rh7AG408900 Rh7AG409000 Rh7BG018200 Rh7BG388800 Rh7CG019000 Rh7DG018800 Rh7DG406800
rosa_wichuraiana	Rw0G022580 Rw0G022590 Rw7G001530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1239
AasI	GACNNNNNNGTC	1 cut(s)	2738
Acc36I	ACCTGC	2 cut(s)	1239, 1595
AccB7I	CCANNNNNTGG	1 cut(s)	1991
AccI	GTMKAC	2 cut(s)	192, 2824
AccII	CGCG	1 cut(s)	105
AccIII	TCCGGA	1 cut(s)	1897
AciI	CCGC	8 cut(s)	100, 103, 250, 323, 390, 1954, 2264, 3081
AclI	AACGTT	1 cut(s)	382
AclWI	GGATC	8 cut(s)	428, 797, 810, 1122, 1262, 1275, 2778, 2912
AcsI	RAATTY	6 cut(s)	898, 935, 1095, 2322, 2886, 2947
AcuI	CTGAAG	4 cut(s)	320, 743, 1794, 2537
AfaI	GTAC	7 cut(s)	313, 1552, 2280, 2349, 2443, 2454, 2595
AfeI	AGCGCT	1 cut(s)	3067
AfiI	CCNNNNNNNGG	7 cut(s)	202, 552, 799, 1156, 1708, 1991, 2873
AflIII	ACRYGT	2 cut(s)	904, 2354
AjiI	CACGTC	2 cut(s)	2986, 3131
AjuI	GAANNNNNNNTTGG	4 cut(s)	583, 615, 829, 861
Alw26I	GTCTC	7 cut(s)	9, 741, 1055, 1068, 2156, 2250, 2903
AlwI	GGATC	8 cut(s)	428, 797, 810, 1122, 1262, 1275, 2778, 2912
AlwNI	CAGNNNCTG	1 cut(s)	364
Ama87I	CYCGRG	1 cut(s)	239
Aor13HI	TCCGGA	1 cut(s)	1897
Aor51HI	AGCGCT	1 cut(s)	3067
AoxI	GGCC	6 cut(s)	93, 886, 1699, 1993, 2371, 2854
ApeKI	GCWGC	6 cut(s)	171, 244, 364, 727, 1799, 1838
ApoI	RAATTY	6 cut(s)	898, 935, 1095, 2322, 2886, 2947
ArsI	GACNNNNNNTTYG	4 cut(s)	209, 241, 2970, 3002
AseI	ATTAAT	1 cut(s)	642
Asp700I	GAANNNNTTC	2 cut(s)	383, 498
AspA2I	CCTAGG	1 cut(s)	2048
AspLEI	GCGC	3 cut(s)	107, 787, 3068
AspS9I	GGNCC	8 cut(s)	94, 235, 654, 887, 1286, 1455, 1994, 2372
AsuC2I	CCSGG	1 cut(s)	2895
AsuHPI	GGTGA	7 cut(s)	109, 133, 505, 1514, 1775, 1844, 2927
AsuII	TTCGAA	1 cut(s)	673
AvaI	CYCGRG	1 cut(s)	239
AvaII	GGWCC	4 cut(s)	235, 654, 1286, 1455
AvrII	CCTAGG	1 cut(s)	2048
AxyI	CCTNAGG	1 cut(s)	1155
BaeGI	GKGCMC	1 cut(s)	1911
BamHI	GGATCC	2 cut(s)	802, 1267
BauI	CACGAG	1 cut(s)	807
BbsI	GAAGAC	2 cut(s)	1632, 2060
BbvI	GCAGC	6 cut(s)	183, 231, 351, 739, 1811, 1825
BccI	CCATC	6 cut(s)	1064, 1563, 1875, 2165, 2354, 2363
BceAI	ACGGC	4 cut(s)	88, 356, 2460, 2996
BclI	TGATCA	2 cut(s)	2902, 2998
BcnI	CCSGG	1 cut(s)	2895
BcoDI	GTCTC	7 cut(s)	9, 741, 1055, 1068, 2156, 2250, 2903
BfaI	CTAG	2 cut(s)	168, 2049
BfmI	CTRYAG	3 cut(s)	916, 1488, 1521
BfoI	RGCGCY	2 cut(s)	788, 3069
BfuAI	ACCTGC	2 cut(s)	1239, 1595
BglII	AGATCT	2 cut(s)	985, 3013
BlnI	CCTAGG	1 cut(s)	2048
Bme18I	GGWCC	4 cut(s)	235, 654, 1286, 1455
BmeT110I	CYCGRG	1 cut(s)	239
BmgBI	CACGTC	2 cut(s)	2986, 3131
BmgT120I	GGNCC	8 cut(s)	94, 235, 654, 887, 1286, 1455, 1994, 2372
BmiI	GGNNCC	4 cut(s)	207, 804, 1269, 1424
BmrI	ACTGGG	2 cut(s)	1174, 1270
BmsI	GCATC	9 cut(s)	475, 625, 935, 1459, 2101, 2170, 2500, 2995, 3147
BmuI	ACTGGG	2 cut(s)	1174, 1270
BpiI	GAAGAC	2 cut(s)	1632, 2060
BplI	GAGNNNNNCTC	2 cut(s)	2950, 2982
BpmI	CTGGAG	2 cut(s)	1602, 1894
Bpu14I	TTCGAA	1 cut(s)	673
BpuEI	CTTGAG	2 cut(s)	269, 1771
BpuMI	CCSGG	1 cut(s)	2895
BsaAI	YACGTR	1 cut(s)	1937
BsaWI	WCCGGW	2 cut(s)	1854, 1897
Bsc4I	CCNNNNNNNGG	7 cut(s)	202, 552, 799, 1156, 1708, 1991, 2873
Bse118I	RCCGGY	1 cut(s)	119
Bse1I	ACTGG	6 cut(s)	627, 814, 1169, 1265, 1552, 2917
Bse21I	CCTNAGG	1 cut(s)	1155
Bse3DI	GCAATG	3 cut(s)	472, 760, 1819
BseAI	TCCGGA	1 cut(s)	1897
BseGI	GGATG	9 cut(s)	640, 1468, 1474, 1585, 1906, 1950, 2371, 2476, 2617
BseLI	CCNNNNNNNGG	7 cut(s)	202, 552, 799, 1156, 1708, 1991, 2873
BseMI	GCAATG	3 cut(s)	472, 760, 1819
BseMII	CTCAG	8 cut(s)	885, 1050, 1700, 1721, 1930, 2118, 2145, 2334
BseNI	ACTGG	6 cut(s)	627, 814, 1169, 1265, 1552, 2917
BseRI	GAGGAG	7 cut(s)	190, 356, 359, 722, 1891, 3044, 3159
BseSI	GKGCMC	1 cut(s)	1911
BseXI	GCAGC	6 cut(s)	183, 231, 351, 739, 1811, 1825
BsgI	GTGCAG	3 cut(s)	441, 603, 3093
Bsh1236I	CGCG	1 cut(s)	105
BshFI	GGCC	6 cut(s)	95, 888, 1701, 1995, 2373, 2856
BsiHKCI	CYCGRG	1 cut(s)	239
BsiSI	CCGG	4 cut(s)	120, 1855, 1898, 2894
BslFI	GGGAC	5 cut(s)	543, 775, 1393, 2155, 2734
BslI	CCNNNNNNNGG	7 cut(s)	202, 552, 799, 1156, 1708, 1991, 2873
BsmAI	GTCTC	7 cut(s)	9, 741, 1055, 1068, 2156, 2250, 2903
BsmFI	GGGAC	5 cut(s)	543, 775, 1393, 2155, 2734
BsnI	GGCC	6 cut(s)	95, 888, 1701, 1995, 2373, 2856
BsoBI	CYCGRG	1 cut(s)	239
Bsp119I	TTCGAA	1 cut(s)	673
Bsp1286I	GDGCHC	1 cut(s)	1911
Bsp13I	TCCGGA	1 cut(s)	1897
BspACI	CCGC	8 cut(s)	100, 103, 250, 323, 390, 1954, 2264, 3081
BspANI	GGCC	6 cut(s)	95, 888, 1701, 1995, 2373, 2856
BspCNI	CTCAG	8 cut(s)	884, 1051, 1699, 1720, 1929, 2119, 2146, 2335
BspEI	TCCGGA	1 cut(s)	1897
BspFNI	CGCG	1 cut(s)	105
BspHI	TCATGA	4 cut(s)	409, 490, 856, 2905
BspLI	GGNNCC	4 cut(s)	207, 804, 1269, 1424
BspMI	ACCTGC	2 cut(s)	1239, 1595
BspPI	GGATC	8 cut(s)	428, 797, 810, 1122, 1262, 1275, 2778, 2912
BspT104I	TTCGAA	1 cut(s)	673
BsrDI	GCAATG	3 cut(s)	472, 760, 1819
BsrFI	RCCGGY	1 cut(s)	119
BsrI	ACTGG	6 cut(s)	627, 814, 1169, 1265, 1552, 2917
BssAI	RCCGGY	1 cut(s)	119
BssSI	CACGAG	1 cut(s)	807
BssT1I	CCWWGG	4 cut(s)	836, 1458, 1990, 2048
Bst2BI	CACGAG	1 cut(s)	807
Bst4CI	ACNGT	5 cut(s)	1290, 2261, 2318, 2686, 2762
Bst6I	CTCTTC	5 cut(s)	519, 1773, 1917, 2708, 2951
BstAPI	GCANNNNNTGC	1 cut(s)	1478
BstBAI	YACGTR	1 cut(s)	1937
BstBI	TTCGAA	1 cut(s)	673
BstC8I	GCNNGC	7 cut(s)	369, 1222, 1411, 2620, 2799, 2809, 2964
BstDSI	CCRYGG	2 cut(s)	1289, 2934
BstEII	GGTNACC	1 cut(s)	511
BstENI	CCTNNNNNAGG	1 cut(s)	1154
BstF5I	GGATG	9 cut(s)	640, 1468, 1474, 1585, 1906, 1950, 2371, 2476, 2617
BstFNI	CGCG	1 cut(s)	105
BstH2I	RGCGCY	2 cut(s)	788, 3069
BstHHI	GCGC	3 cut(s)	107, 787, 3068
BstMAI	GTCTC	7 cut(s)	9, 741, 1055, 1068, 2156, 2250, 2903
BstMWI	GCNNNNNNNGC	7 cut(s)	295, 872, 1410, 1478, 1493, 2735, 2794
BstNSI	RCATGY	4 cut(s)	908, 1845, 2358, 2966
BstPI	GGTNACC	1 cut(s)	511
BstSFI	CTRYAG	3 cut(s)	916, 1488, 1521
BstSLI	GKGCMC	1 cut(s)	1911
BstSNI	TACGTA	1 cut(s)	1937
BstUI	CGCG	1 cut(s)	105
BstV1I	GCAGC	6 cut(s)	183, 231, 351, 739, 1811, 1825
BstV2I	GAAGAC	2 cut(s)	1632, 2060
BstX2I	RGATCY	5 cut(s)	802, 985, 1114, 1267, 3013
BstYI	RGATCY	5 cut(s)	802, 985, 1114, 1267, 3013
Bsu36I	CCTNAGG	1 cut(s)	1155
BsuRI	GGCC	6 cut(s)	95, 888, 1701, 1995, 2373, 2856
BtgI	CCRYGG	2 cut(s)	1289, 2934
BtgZI	GCGATG	2 cut(s)	2651, 3099
BtrI	CACGTC	2 cut(s)	2986, 3131
BtsCI	GGATG	9 cut(s)	640, 1468, 1474, 1585, 1906, 1950, 2371, 2476, 2617
BtsI	GCAGTG	1 cut(s)	1380
BtsIMutI	CAGTG	5 cut(s)	620, 1380, 1406, 2421, 2562
BveI	ACCTGC	2 cut(s)	1239, 1595
Cac8I	GCNNGC	7 cut(s)	369, 1222, 1411, 2620, 2799, 2809, 2964
CaiI	CAGNNNCTG	1 cut(s)	364
CciI	TCATGA	4 cut(s)	409, 490, 856, 2905
CfoI	GCGC	3 cut(s)	107, 787, 3068
Cfr10I	RCCGGY	1 cut(s)	119
Cfr13I	GGNCC	8 cut(s)	94, 235, 654, 887, 1286, 1455, 1994, 2372
CseI	GACGC	5 cut(s)	370, 2210, 2390, 2483, 2624
CsiI	ACCWGGT	2 cut(s)	2596, 2818
Csp6I	GTAC	7 cut(s)	312, 1551, 2279, 2348, 2442, 2453, 2594
CspCI	CAANNNNNGTGG	2 cut(s)	529, 564
CviQI	GTAC	7 cut(s)	312, 1551, 2279, 2348, 2442, 2453, 2594
DrdI	GACNNNNNNGTC	1 cut(s)	2738
DseDI	GACNNNNNNGTC	1 cut(s)	2738
Eam1104I	CTCTTC	5 cut(s)	519, 1773, 1917, 2708, 2951
EarI	CTCTTC	5 cut(s)	519, 1773, 1917, 2708, 2951
EciI	GGCGGA	2 cut(s)	89, 312
Eco105I	TACGTA	1 cut(s)	1937
Eco130I	CCWWGG	4 cut(s)	836, 1458, 1990, 2048
Eco47I	GGWCC	4 cut(s)	235, 654, 1286, 1455
Eco47III	AGCGCT	1 cut(s)	3067
Eco57I	CTGAAG	4 cut(s)	320, 743, 1794, 2537
Eco81I	CCTNAGG	1 cut(s)	1155
Eco88I	CYCGRG	1 cut(s)	239
Eco91I	GGTNACC	1 cut(s)	511
EcoNI	CCTNNNNNAGG	1 cut(s)	1154
EcoO109I	RGGNCCY	3 cut(s)	94, 235, 654
EcoO65I	GGTNACC	1 cut(s)	511
EcoRI	GAATTC	1 cut(s)	2947
EcoT14I	CCWWGG	4 cut(s)	836, 1458, 1990, 2048
ErhI	CCWWGG	4 cut(s)	836, 1458, 1990, 2048
FaqI	GGGAC	5 cut(s)	543, 775, 1393, 2155, 2734
FbaI	TGATCA	2 cut(s)	2902, 2998
FblI	GTMKAC	2 cut(s)	192, 2824
FokI	GGATG	9 cut(s)	647, 1475, 1481, 1572, 1913, 1937, 2378, 2483, 2624
FspBI	CTAG	2 cut(s)	168, 2049
GlaI	GCGC	3 cut(s)	106, 786, 3067
GsuI	CTGGAG	2 cut(s)	1602, 1894
HaeII	RGCGCY	2 cut(s)	788, 3069
HaeIII	GGCC	6 cut(s)	95, 888, 1701, 1995, 2373, 2856
HapII	CCGG	4 cut(s)	120, 1855, 1898, 2894
HgaI	GACGC	5 cut(s)	370, 2210, 2390, 2483, 2624
HhaI	GCGC	3 cut(s)	107, 787, 3068
Hin6I	GCGC	3 cut(s)	105, 785, 3066
HinP1I	GCGC	3 cut(s)	105, 785, 3066
HincII	GTYRAC	3 cut(s)	1162, 1735, 2825
HindII	GTYRAC	3 cut(s)	1162, 1735, 2825
HindIII	AAGCTT	5 cut(s)	1222, 1494, 2720, 2778, 2849
HpaI	GTTAAC	1 cut(s)	1162
HpaII	CCGG	4 cut(s)	120, 1855, 1898, 2894
HphI	GGTGA	7 cut(s)	109, 133, 505, 1514, 1775, 1844, 2927
Hpy166II	GTNNAC	8 cut(s)	193, 1162, 1293, 1455, 1614, 1735, 2442, 2825
Hpy8I	GTNNAC	8 cut(s)	193, 1162, 1293, 1455, 1614, 1735, 2442, 2825
HpyCH4III	ACNGT	5 cut(s)	1290, 2261, 2318, 2686, 2762
HpyCH4IV	ACGT	7 cut(s)	189, 382, 1936, 1981, 2019, 2985, 3130
HpyF10VI	GCNNNNNNNGC	7 cut(s)	295, 872, 1410, 1478, 1493, 2735, 2794
HpySE526I	ACGT	7 cut(s)	189, 382, 1936, 1981, 2019, 2985, 3130
HspAI	GCGC	3 cut(s)	105, 785, 3066
Kpn2I	TCCGGA	1 cut(s)	1897
Ksp22I	TGATCA	2 cut(s)	2902, 2998
KspAI	GTTAAC	1 cut(s)	1162
LmnI	GCTCC	4 cut(s)	211, 252, 1168, 1422
Lsp1109I	GCAGC	6 cut(s)	183, 231, 351, 739, 1811, 1825
LweI	GCATC	9 cut(s)	475, 625, 935, 1459, 2101, 2170, 2500, 2995, 3147
MabI	ACCWGGT	2 cut(s)	2596, 2818
MaeI	CTAG	2 cut(s)	168, 2049
MaeII	ACGT	7 cut(s)	189, 382, 1936, 1981, 2019, 2985, 3130
MaeIII	GTNAC	5 cut(s)	511, 2020, 2402, 2543, 3034
MfeI	CAATTG	1 cut(s)	1803
MflI	RGATCY	5 cut(s)	802, 985, 1114, 1267, 3013
MhlI	GDGCHC	1 cut(s)	1911
MlyI	GAGTC	6 cut(s)	212, 1070, 1384, 1609, 1778, 2756
MmeI	TCCRAC	5 cut(s)	240, 297, 360, 1613, 1652
MroI	TCCGGA	1 cut(s)	1897
MroXI	GAANNNNTTC	2 cut(s)	383, 498
MslI	CAYNNNNRTG	3 cut(s)	1399, 2495, 2636
MspA1I	CMGCKG	1 cut(s)	3081
MspI	CCGG	4 cut(s)	120, 1855, 1898, 2894
MunI	CAATTG	1 cut(s)	1803
MvnI	CGCG	1 cut(s)	105
MwoI	GCNNNNNNNGC	7 cut(s)	295, 872, 1410, 1478, 1493, 2735, 2794
NciI	CCSGG	1 cut(s)	2895
NlaIV	GGNNCC	4 cut(s)	207, 804, 1269, 1424
NmeAIII	GCCGAG	2 cut(s)	40, 182
NmuCI	GTSAC	4 cut(s)	511, 2402, 2543, 3034
NspI	RCATGY	4 cut(s)	908, 1845, 2358, 2966
NspV	TTCGAA	1 cut(s)	673
PaeI	GCATGC	1 cut(s)	2966
PaeR7I	CTCGAG	1 cut(s)	239
PagI	TCATGA	4 cut(s)	409, 490, 856, 2905
PaqCI	CACCTGC	1 cut(s)	1239
PciI	ACATGT	2 cut(s)	904, 2354
PdmI	GAANNNNTTC	2 cut(s)	383, 498
PfeI	GAWTC	5 cut(s)	566, 845, 1046, 1315, 3134
PflMI	CCANNNNNTGG	1 cut(s)	1991
PfoI	TCCNGGA	2 cut(s)	2742, 2893
PleI	GAGTC	6 cut(s)	212, 1070, 1384, 1609, 1778, 2755
PpsI	GAGTC	6 cut(s)	212, 1070, 1384, 1609, 1778, 2755
Ppu21I	YACGTR	1 cut(s)	1937
PpuMI	RGGWCCY	2 cut(s)	235, 654
PscI	ACATGT	2 cut(s)	904, 2354
PshBI	ATTAAT	1 cut(s)	642
Psp1406I	AACGTT	1 cut(s)	382
Psp5II	RGGWCCY	2 cut(s)	235, 654
PspEI	GGTNACC	1 cut(s)	511
PspN4I	GGNNCC	4 cut(s)	207, 804, 1269, 1424
PspPI	GGNCC	8 cut(s)	94, 235, 654, 887, 1286, 1455, 1994, 2372
PspPPI	RGGWCCY	2 cut(s)	235, 654
PspXI	VCTCGAGB	1 cut(s)	239
PstNI	CAGNNNCTG	1 cut(s)	364
PsuI	RGATCY	5 cut(s)	802, 985, 1114, 1267, 3013
RsaI	GTAC	7 cut(s)	313, 1552, 2280, 2349, 2443, 2454, 2595
RsaNI	GTAC	7 cut(s)	312, 1551, 2279, 2348, 2442, 2453, 2594
RseI	CAYNNNNRTG	3 cut(s)	1399, 2495, 2636
SalI	GTCGAC	1 cut(s)	2823
Sau96I	GGNCC	8 cut(s)	94, 235, 654, 887, 1286, 1455, 1994, 2372
SchI	GAGTC	6 cut(s)	212, 1070, 1384, 1609, 1778, 2756
SduI	GDGCHC	1 cut(s)	1911
SexAI	ACCWGGT	2 cut(s)	2596, 2818
SfaNI	GCATC	9 cut(s)	475, 625, 935, 1459, 2101, 2170, 2500, 2995, 3147
SfcI	CTRYAG	3 cut(s)	916, 1488, 1521
Sfr274I	CTCGAG	1 cut(s)	239
SfuI	TTCGAA	1 cut(s)	673
SinI	GGWCC	4 cut(s)	235, 654, 1286, 1455
SlaI	CTCGAG	1 cut(s)	239
SmiMI	CAYNNNNRTG	3 cut(s)	1399, 2495, 2636
SmlI	CTYRAG	3 cut(s)	239, 284, 1786
SmoI	CTYRAG	3 cut(s)	239, 284, 1786
SnaBI	TACGTA	1 cut(s)	1937
SphI	GCATGC	1 cut(s)	2966
SsiI	CCGC	8 cut(s)	100, 103, 250, 323, 390, 1954, 2264, 3081
SspI	AATATT	1 cut(s)	1363
SspMI	CTAG	2 cut(s)	168, 2049
StyI	CCWWGG	4 cut(s)	836, 1458, 1990, 2048
TaaI	ACNGT	5 cut(s)	1290, 2261, 2318, 2686, 2762
TaiI	ACGT	7 cut(s)	192, 385, 1939, 1984, 2022, 2988, 3133
TaqI	TCGA	8 cut(s)	90, 228, 240, 673, 955, 1079, 1119, 2824
TatI	WGTACW	1 cut(s)	311
TauI	GCSGC	4 cut(s)	105, 392, 2267, 3084
TfiI	GAWTC	5 cut(s)	566, 845, 1046, 1315, 3134
TscAI	CASTG	5 cut(s)	627, 1380, 1406, 2428, 2569
TseFI	GTSAC	4 cut(s)	511, 2402, 2543, 3034
TseI	GCWGC	6 cut(s)	171, 244, 364, 727, 1799, 1838
Tsp45I	GTSAC	4 cut(s)	511, 2402, 2543, 3034
TspGWI	ACGGA	4 cut(s)	535, 1027, 1554, 2365
TspRI	CASTG	5 cut(s)	627, 1380, 1406, 2428, 2569
Van91I	CCANNNNNTGG	1 cut(s)	1991
VpaK11BI	GGWCC	4 cut(s)	235, 654, 1286, 1455
VspI	ATTAAT	1 cut(s)	642
XagI	CCTNNNNNAGG	1 cut(s)	1154
XapI	RAATTY	6 cut(s)	898, 935, 1095, 2322, 2886, 2947
XceI	RCATGY	4 cut(s)	908, 1845, 2358, 2966
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1337
XhoI	CTCGAG	1 cut(s)	239
XmaJI	CCTAGG	1 cut(s)	2048
XmiI	GTMKAC	2 cut(s)	192, 2824
XmnI	GAANNNNTTC	2 cut(s)	383, 498
XspI	CTAG	2 cut(s)	168, 2049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.