Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0002490

Physical Location & Seq

Genomic Coordinates Forward (+)

1279714 .. 1286609

Gene Structure 6896 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G001530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3201 bp

ATGTCTCCTCTCGCCGAGAACGACGAGCTTTCTTACTACGACGACGACGACGACGACGATGACGACGGCTTCAACGCCGACATCGAGGCCCTCCGCCGCGCCTGTATGCTCACCGGCAAAGACCCCGACGACATCACCACCAAAAATGACGACGAAAACCCTAGCAGCAACCAAAACGACGACGTAGACCTCTCCTCGGCTCCCAATTCCGACTCCGATTTCGACGAGGACCTCGAGCTGCTCCGCAAAATCAAGAGCCAATTCTCCAACACTTCTCTCAAGCCTCTTTCGCTGAAGCCTCTCTGTACTTTGCTTCCGCCTTCTGCCTCCGACGAGGAGGAGGACGACTACCAGACGCTGCTCGCCGTTCGGAAACGTTTCGCCGCCTATGAGAACGATACTCAGGACAAAAGTGCAGAGCAGATTGATCCTTCCTGCAAATCAGTCGACGAAACTTGCAATGAAGTATCTGGAACTGATGCTCATGAAAGGTTTCTTACTCTGGTCACCGATAATGAAGAGGGACAGCCTTCCACTTCCATTGAGTGGGTTCAGTCAGATTCTTGTGAGCCAACTCTGTTGCCAACCAAAAGTTCAGGGTTCCCAAAGTCTGCACTGGCTTTTCTGGATGCTATTAATAAGAATAGGTCCTGTCAGAAGTTTCTTCGAAGTAAGCTAATACAAATCCAAGCGAAAATTGAGGAGAACAACAAACTGAAGCAGCGTGTCAAAATCCTTAGAGACTTTCAAGCTCATTGCAAAAGACGAACAGGAGAGGCGCTGTCCCAAAAGAAGGATCCTCGTGTCCAGTTAATTTTAACGAAAAAGCCAAGGGCTGATTCAAAGGCTCATGACAGAGCTATCTCAGCTATGTCTTATGGCCCAGAAGAAAATTCACATGTTGCCAACTACAGAAAGGCATCAACAAAATTTCCACTTTCATTAGATCGAAAAAATTGGTCAGAGGTAGAAAAGAAAGATCTTCAAAATGGAATAAGACAGCAATTTCAGGAAATGGTGCTTCAATCTTCCGTAGATGATTCAAGTTATTCTGAGACACCTGATGGAGACTCGAATGACATTGATAAAATTTTGGCTTCAATCAAGGATCTCGAAATTACCCCATATAGCATTAGAGAGTTCCTGCCTAAGGTTAACTGGGAACAGTTGGCTTCCATGTATGTTCCTGGTCGCTCTGGTGGAGAATGTGAAGCAAGGTGGTTGAACTGGGAGGATCCCTTAATTAGTCATGGACCGTGGACAACAGATGAGGATAAGACGATTCTGTATCTTGTCCAGAAGAAGAATGGGGTCAATGATTGGAATAATATTGCAGAAGCAGTGGGGACTAACAGGACTCCATTTCAGTGCTTGGCACGCTACCAAAGGAGCCTAAATGCTTCTATACTGAAACGGGAGTGGACCAAGGATGAGGATGCAAAACTTGCTTCTGCTGTAGAAGCTTTTGGTGAGGGTAATTGGCAGTCTGTAGCTTCTGCTTTGAACGGACGAACTGGCACTCAATGCTCTAATAGATGGAAGAAATCACTTCATCCAACCAGGACAAGAGCAGGTAAGTGGACTCCAGAGGAAGACAAACGCCTGATAGTAGCTCAAATGCTTTTTGGGTCAAAAAGTTGGAACAAGACAGCTCAGTTTGTGCCAGGCCGAACTCAGGCACAATGCAGAGATAGATATGTCAACTCTTTAGAACCTTCTTTGAGGTGTGGTGAATGGACTGAAGAAGAGGACTCAAGGTTGATAGCAGCAATTGAAGAATATGGACATTGCTGGTCAAAAGTTGCTGCATGTGTGCCTCACCGGACTGATAATATGTGCTGGAGGAGATGGAAGGTGTTGTTTCCGGATGAAGTGCCCTTGCTCAGAGAAGAGAAAAGAATACGTAAGACTGCTCTCATCCGCAACTTTGTTGATCGGGAGAAAGAACGTCCAGCCCTTGGCCCTAATGATTTTCTTCTACAAGACGTTACCTCAATGAAAACTTTAACTTATCCTAGGAAGACGGGAGGATTAAGCCAAGTTCCAAAGAAGATTAAACCCAGGAGGCATAGAAACGATGCTCAACTTTGCTCTGAGGAAGAACCTGGGACAAGCAATTCTGAGGTTGAGACTTATGATGGGGAAGATGCCTCAAAGAAGAAGAAGAAGAAGAAGAAAGTTCTTAAACAGCGTCAAAGAAGGCACAAAGACAATGAACCCACAGGAGACTGTGCGGCTGTTGTGCCTGTACCAAAGAAGATTAGACCCAGGAGGAATAGAAACAACGGTCAAATTCCTGGGGTAAGCAATTCTGAGGTACGGACATGTGATGGGGATGATGGCCCGAAGAAGAAGAAAGTTCTTAAACAGCGTCACAGAAGGCACAAAGGCACTGAACTAACAGAAGAGTGTACGGCTATTGTACCTGTTAGTAATGAGGATGACGCACACAAAGAACCCACAGAAATGTCTTGTTCAGATGCCCTGAAGAAGAAGAAAGTTCTTAAACATCGTCACAGAAAGCACAGAGGCACTGAACCAACAGGAGAGTGTAAGGCTATTGTACCTGTTAGTAATGAGGATGACGCACGCAAAGAACCCACAGCGATGTCTTATTCAGATCAAATCATAGGAACATCAGATGAAGATGATACTGTTTCTTACTATCTACATAAATCAAGGAAGAGAAAGCTTGAAGCTGATCTGGCTGTCCAGGAGTCCCCCTTCTACTGTATAAGGGATCGTGAAGCTTTAATGCAACATGAGCCAGCCATAGCTTGCAATAAACCTGGTCGACAAAAATTAGTCAGAGGGCAAAAGCTTGGCCTCCAAGAACCAATGAGGGGAGTGTTGAGAATTTGTCCGGGAAGTGTTCATGAGACTGATGATCCTGTTGTGGCTTCCACGGGGAAAAAGAATTCAAAGAAGAGGCATGCTCAAACTACCAAACGGCACGTCATTTGTAATGATCCCGATGCAGGAGATCTACCTAAACAAGAGGAGGTCAAAATCAAATCTGGGAAGGAACAAGTGAGCGCTGGTGCAGACAGCGGCGATGATATAACACTTGCTTGTTTTCTTAATAGATTAAAGAAGCGACGTGAGATCTGGCAGAGGAGATATTCAGATGCCGAGGTGATATTAGGACTTTTCATTTGTACATGCACTGTACTTTTTATAGGTAGAACTCCTTTAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0048285 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051225 GO:0051252 GO:0060255 GO:0065007 GO:0070925 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0140014 GO:0140110 GO:1901363 GO:1902850 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

1066

Amino Acids

120.96

Weight (kDa)

7.95

Isoelectric Point (pI)

52.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	418 - 463	5.1e-10	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	420 - 479	1.1e-13	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	471 - 515	7.1e-14	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	474 - 523	2.1e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	525 - 568	4.7e-12	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	527 - 583	1.3e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	577 - 618	1.1e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	579 - 622	2.4e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002490)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18100 AT3G18100 AT3G18100 AT3G18100
fragaria_vesca	FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070
malus_domestica	MD14G1233900.v1.1
prunus_persica	Prupe.5G230100_v2.0.a1 Prupe.5G230100_v2.0.a1
pyrus_communis	pycom14g19490
rosa_chinensis	RchiOBHm_Chr7g0178781 RchiOBHm_Chr7g0230201
rosa_laevigata	RLG00000005416
rosa_multiflora	Rmu_sc0001901.1_g000001 Rmu_sc0002822.1_g000027 Rmu_sc0004110.1_g000007 Rmu_sc0004110.1_g000008 Rmu_sc0015029.1_g000002 Rmu_sc0025325.1_g000009
rosa_roxburghii	Rroxscaffold_3G00230300 Rroxscaffold_3G00274620
rosa_rugosa	Rorug06G0419400 Rorug06G0419500 Rorug06G0419600
rosa_samantha	Rh7AG018900 Rh7AG408900 Rh7AG409000 Rh7BG018200 Rh7BG388800 Rh7CG019000 Rh7DG018800 Rh7DG406800
rosa_wichuraiana	Rw0G022580 Rw0G022590 Rw7G001530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1562
AccB7I	CCANNNNNTGG	2 cut(s)	546, 1958
AccI	GTMKAC	3 cut(s)	186, 447, 2794
AccII	CGCG	1 cut(s)	99
AccIII	TCCGGA	1 cut(s)	1864
AciI	CCGC	8 cut(s)	94, 97, 244, 317, 384, 1921, 2234, 3051
AclI	AACGTT	1 cut(s)	376
AclWI	GGATC	9 cut(s)	422, 791, 804, 1116, 1229, 1242, 2748, 2882, 2963
AcsI	RAATTY	6 cut(s)	892, 929, 1089, 2292, 2856, 2917
AcuI	CTGAAG	4 cut(s)	314, 737, 1761, 2507
AfaI	GTAC	8 cut(s)	307, 2250, 2319, 2413, 2424, 2565, 3160, 3171
AfeI	AGCGCT	1 cut(s)	3037
AfiI	CCNNNNNNNGG	8 cut(s)	196, 546, 793, 1150, 1675, 1958, 2843, 2978
AflIII	ACRYGT	2 cut(s)	898, 2324
AjiI	CACGTC	2 cut(s)	2956, 3101
AjnI	CCWGG	9 cut(s)	1186, 1559, 1663, 2060, 2104, 2267, 2296, 2712, 2788
AjuI	GAANNNNNNNTTGG	4 cut(s)	577, 609, 823, 855
Alw26I	GTCTC	7 cut(s)	9, 735, 1049, 1062, 2123, 2220, 2873
AlwI	GGATC	9 cut(s)	422, 791, 804, 1116, 1229, 1242, 2748, 2882, 2963
AlwNI	CAGNNNCTG	1 cut(s)	358
Ama87I	CYCGRG	1 cut(s)	233
Aor13HI	TCCGGA	1 cut(s)	1864
Aor51HI	AGCGCT	1 cut(s)	3037
AoxI	GGCC	6 cut(s)	87, 880, 1666, 1960, 2341, 2824
ApeKI	GCWGC	6 cut(s)	165, 238, 358, 721, 1766, 1805
ApoI	RAATTY	6 cut(s)	892, 929, 1089, 2292, 2856, 2917
ArsI	GACNNNNNNTTYG	6 cut(s)	203, 235, 2940, 2972, 3138, 3170
AseI	ATTAAT	1 cut(s)	636
Asp700I	GAANNNNTTC	2 cut(s)	377, 492
AspA2I	CCTAGG	1 cut(s)	2015
AspLEI	GCGC	3 cut(s)	101, 781, 3038
AspS9I	GGNCC	8 cut(s)	88, 229, 648, 881, 1253, 1422, 1961, 2342
AsuC2I	CCSGG	1 cut(s)	2865
AsuHPI	GGTGA	7 cut(s)	103, 127, 499, 1481, 1742, 1811, 3148
AsuII	TTCGAA	1 cut(s)	667
AvaI	CYCGRG	1 cut(s)	233
AvaII	GGWCC	4 cut(s)	229, 648, 1253, 1422
AvrII	CCTAGG	1 cut(s)	2015
AxyI	CCTNAGG	1 cut(s)	1149
BaeGI	GKGCMC	1 cut(s)	1878
BamHI	GGATCC	2 cut(s)	796, 1234
BauI	CACGAG	1 cut(s)	801
BbsI	GAAGAC	2 cut(s)	1599, 2027
BbvI	GCAGC	6 cut(s)	177, 225, 345, 733, 1778, 1792
BccI	CCATC	6 cut(s)	1058, 1530, 1842, 2132, 2324, 2333
BceAI	ACGGC	4 cut(s)	82, 350, 2430, 2966
BcgI	CGANNNNNNTGC	2 cut(s)	427, 461
BciT130I	CCWGG	9 cut(s)	1188, 1561, 1665, 2062, 2106, 2269, 2298, 2714, 2790
BcnI	CCSGG	1 cut(s)	2865
BcoDI	GTCTC	7 cut(s)	9, 735, 1049, 1062, 2123, 2220, 2873
BfaI	CTAG	2 cut(s)	162, 2016
BfmI	CTRYAG	3 cut(s)	910, 1455, 1488
BfoI	RGCGCY	2 cut(s)	782, 3039
BfuAI	ACCTGC	1 cut(s)	1562
BglII	AGATCT	3 cut(s)	979, 2983, 3105
BlnI	CCTAGG	1 cut(s)	2015
Bme18I	GGWCC	4 cut(s)	229, 648, 1253, 1422
BmeT110I	CYCGRG	1 cut(s)	233
BmgBI	CACGTC	2 cut(s)	2956, 3101
BmgT120I	GGNCC	8 cut(s)	88, 229, 648, 881, 1253, 1422, 1961, 2342
BmiI	GGNNCC	5 cut(s)	201, 602, 798, 1236, 1391
BmrI	ACTGGG	2 cut(s)	1168, 1237
BmsI	GCATC	9 cut(s)	469, 619, 929, 1426, 2068, 2137, 2470, 2965, 3118
BmuI	ACTGGG	2 cut(s)	1168, 1237
BpiI	GAAGAC	2 cut(s)	1599, 2027
BplI	GAGNNNNNCTC	2 cut(s)	2920, 2952
BpmI	CTGGAG	2 cut(s)	1569, 1861
Bpu14I	TTCGAA	1 cut(s)	667
BpuEI	CTTGAG	2 cut(s)	263, 1738
BpuMI	CCSGG	1 cut(s)	2865
BsaAI	YACGTR	1 cut(s)	1904
BsaWI	WCCGGW	2 cut(s)	1821, 1864
Bsc4I	CCNNNNNNNGG	8 cut(s)	196, 546, 793, 1150, 1675, 1958, 2843, 2978
Bse118I	RCCGGY	1 cut(s)	113
Bse1I	ACTGG	5 cut(s)	621, 808, 1163, 1232, 1519
Bse21I	CCTNAGG	1 cut(s)	1149
Bse3DI	GCAATG	3 cut(s)	466, 754, 1786
BseAI	TCCGGA	1 cut(s)	1864
BseBI	CCWGG	9 cut(s)	1188, 1561, 1665, 2062, 2106, 2269, 2298, 2714, 2790
BseGI	GGATG	9 cut(s)	634, 1435, 1441, 1552, 1873, 1917, 2341, 2446, 2587
BseLI	CCNNNNNNNGG	8 cut(s)	196, 546, 793, 1150, 1675, 1958, 2843, 2978
BseMI	GCAATG	3 cut(s)	466, 754, 1786
BseMII	CTCAG	9 cut(s)	416, 879, 1044, 1667, 1688, 1897, 2085, 2112, 2304
BseNI	ACTGG	5 cut(s)	621, 808, 1163, 1232, 1519
BseRI	GAGGAG	7 cut(s)	184, 350, 353, 716, 1858, 3014, 3130
BseSI	GKGCMC	1 cut(s)	1878
BseXI	GCAGC	6 cut(s)	177, 225, 345, 733, 1778, 1792
BsgI	GTGCAG	3 cut(s)	435, 597, 3063
Bsh1236I	CGCG	1 cut(s)	99
BshFI	GGCC	6 cut(s)	89, 882, 1668, 1962, 2343, 2826
BsiHKCI	CYCGRG	1 cut(s)	233
BsiSI	CCGG	4 cut(s)	114, 1822, 1865, 2864
BslFI	GGGAC	5 cut(s)	537, 769, 1360, 2122, 2704
BslI	CCNNNNNNNGG	8 cut(s)	196, 546, 793, 1150, 1675, 1958, 2843, 2978
BsmAI	GTCTC	7 cut(s)	9, 735, 1049, 1062, 2123, 2220, 2873
BsmFI	GGGAC	5 cut(s)	537, 769, 1360, 2122, 2704
BsnI	GGCC	6 cut(s)	89, 882, 1668, 1962, 2343, 2826
BsoBI	CYCGRG	1 cut(s)	233
Bsp119I	TTCGAA	1 cut(s)	667
Bsp1286I	GDGCHC	1 cut(s)	1878
Bsp13I	TCCGGA	1 cut(s)	1864
Bsp1407I	TGTACA	1 cut(s)	3158
BspACI	CCGC	8 cut(s)	94, 97, 244, 317, 384, 1921, 2234, 3051
BspANI	GGCC	6 cut(s)	89, 882, 1668, 1962, 2343, 2826
BspCNI	CTCAG	9 cut(s)	415, 878, 1045, 1666, 1687, 1896, 2086, 2113, 2305
BspEI	TCCGGA	1 cut(s)	1864
BspFNI	CGCG	1 cut(s)	99
BspHI	TCATGA	3 cut(s)	484, 850, 2875
BspLI	GGNNCC	5 cut(s)	201, 602, 798, 1236, 1391
BspMI	ACCTGC	1 cut(s)	1562
BspPI	GGATC	9 cut(s)	422, 791, 804, 1116, 1229, 1242, 2748, 2882, 2963
BspT104I	TTCGAA	1 cut(s)	667
BsrDI	GCAATG	3 cut(s)	466, 754, 1786
BsrFI	RCCGGY	1 cut(s)	113
BsrGI	TGTACA	1 cut(s)	3158
BsrI	ACTGG	5 cut(s)	621, 808, 1163, 1232, 1519
BssAI	RCCGGY	1 cut(s)	113
BssSI	CACGAG	1 cut(s)	801
BssT1I	CCWWGG	4 cut(s)	830, 1425, 1957, 2015
Bst2BI	CACGAG	1 cut(s)	801
Bst2UI	CCWGG	9 cut(s)	1188, 1561, 1665, 2062, 2106, 2269, 2298, 2714, 2790
Bst4CI	ACNGT	7 cut(s)	1167, 1257, 2231, 2288, 2656, 2732, 3169
Bst6I	CTCTTC	6 cut(s)	513, 1740, 1884, 2400, 2678, 2921
BstAPI	GCANNNNNTGC	2 cut(s)	1445, 1524
BstAUI	TGTACA	1 cut(s)	3158
BstBAI	YACGTR	1 cut(s)	1904
BstBI	TTCGAA	1 cut(s)	667
BstC8I	GCNNGC	6 cut(s)	363, 1378, 2590, 2769, 2779, 2934
BstDSI	CCRYGG	2 cut(s)	1256, 2904
BstEII	GGTNACC	1 cut(s)	505
BstENI	CCTNNNNNAGG	1 cut(s)	1148
BstF5I	GGATG	9 cut(s)	634, 1435, 1441, 1552, 1873, 1917, 2341, 2446, 2587
BstFNI	CGCG	1 cut(s)	99
BstH2I	RGCGCY	2 cut(s)	782, 3039
BstHHI	GCGC	3 cut(s)	101, 781, 3038
BstMAI	GTCTC	7 cut(s)	9, 735, 1049, 1062, 2123, 2220, 2873
BstMWI	GCNNNNNNNGC	8 cut(s)	289, 866, 1377, 1445, 1460, 1524, 2705, 2764
BstNI	CCWGG	9 cut(s)	1188, 1561, 1665, 2062, 2106, 2269, 2298, 2714, 2790
BstNSI	RCATGY	5 cut(s)	902, 1812, 2328, 2936, 3165
BstPI	GGTNACC	1 cut(s)	505
BstSFI	CTRYAG	3 cut(s)	910, 1455, 1488
BstSLI	GKGCMC	1 cut(s)	1878
BstSNI	TACGTA	1 cut(s)	1904
BstUI	CGCG	1 cut(s)	99
BstV1I	GCAGC	6 cut(s)	177, 225, 345, 733, 1778, 1792
BstV2I	GAAGAC	2 cut(s)	1599, 2027
BstX2I	RGATCY	6 cut(s)	796, 979, 1108, 1234, 2983, 3105
BstYI	RGATCY	6 cut(s)	796, 979, 1108, 1234, 2983, 3105
Bsu36I	CCTNAGG	1 cut(s)	1149
BsuRI	GGCC	6 cut(s)	89, 882, 1668, 1962, 2343, 2826
BtgI	CCRYGG	2 cut(s)	1256, 2904
BtgZI	GCGATG	2 cut(s)	2621, 3069
BtrI	CACGTC	2 cut(s)	2956, 3101
BtsCI	GGATG	9 cut(s)	634, 1435, 1441, 1552, 1873, 1917, 2341, 2446, 2587
BtsI	GCAGTG	1 cut(s)	1347
BtsIMutI	CAGTG	6 cut(s)	614, 1347, 1373, 2391, 2532, 3165
BveI	ACCTGC	1 cut(s)	1562
Cac8I	GCNNGC	6 cut(s)	363, 1378, 2590, 2769, 2779, 2934
CaiI	CAGNNNCTG	1 cut(s)	358
CciI	TCATGA	3 cut(s)	484, 850, 2875
CfoI	GCGC	3 cut(s)	101, 781, 3038
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	8 cut(s)	88, 229, 648, 881, 1253, 1422, 1961, 2342
CseI	GACGC	5 cut(s)	364, 2180, 2360, 2453, 2594
CsiI	ACCWGGT	1 cut(s)	2788
Csp6I	GTAC	8 cut(s)	306, 2249, 2318, 2412, 2423, 2564, 3159, 3170
CspCI	CAANNNNNGTGG	2 cut(s)	523, 558
CviQI	GTAC	8 cut(s)	306, 2249, 2318, 2412, 2423, 2564, 3159, 3170
Eam1104I	CTCTTC	6 cut(s)	513, 1740, 1884, 2400, 2678, 2921
EarI	CTCTTC	6 cut(s)	513, 1740, 1884, 2400, 2678, 2921
EciI	GGCGGA	2 cut(s)	83, 306
Eco105I	TACGTA	1 cut(s)	1904
Eco130I	CCWWGG	4 cut(s)	830, 1425, 1957, 2015
Eco47I	GGWCC	4 cut(s)	229, 648, 1253, 1422
Eco47III	AGCGCT	1 cut(s)	3037
Eco57I	CTGAAG	4 cut(s)	314, 737, 1761, 2507
Eco81I	CCTNAGG	1 cut(s)	1149
Eco88I	CYCGRG	1 cut(s)	233
Eco91I	GGTNACC	1 cut(s)	505
EcoNI	CCTNNNNNAGG	1 cut(s)	1148
EcoO109I	RGGNCCY	3 cut(s)	88, 229, 648
EcoO65I	GGTNACC	1 cut(s)	505
EcoRI	GAATTC	1 cut(s)	2917
EcoRII	CCWGG	9 cut(s)	1186, 1559, 1663, 2060, 2104, 2267, 2296, 2712, 2788
EcoT14I	CCWWGG	4 cut(s)	830, 1425, 1957, 2015
ErhI	CCWWGG	4 cut(s)	830, 1425, 1957, 2015
FaqI	GGGAC	5 cut(s)	537, 769, 1360, 2122, 2704
FblI	GTMKAC	3 cut(s)	186, 447, 2794
FokI	GGATG	9 cut(s)	641, 1442, 1448, 1539, 1880, 1904, 2348, 2453, 2594
FspBI	CTAG	2 cut(s)	162, 2016
GlaI	GCGC	3 cut(s)	100, 780, 3037
GsuI	CTGGAG	2 cut(s)	1569, 1861
HaeII	RGCGCY	2 cut(s)	782, 3039
HaeIII	GGCC	6 cut(s)	89, 882, 1668, 1962, 2343, 2826
HapII	CCGG	4 cut(s)	114, 1822, 1865, 2864
HgaI	GACGC	5 cut(s)	364, 2180, 2360, 2453, 2594
HhaI	GCGC	3 cut(s)	101, 781, 3038
Hin6I	GCGC	3 cut(s)	99, 779, 3036
HinP1I	GCGC	3 cut(s)	99, 779, 3036
HincII	GTYRAC	4 cut(s)	448, 1156, 1702, 2795
HindII	GTYRAC	4 cut(s)	448, 1156, 1702, 2795
HindIII	AAGCTT	4 cut(s)	1461, 2690, 2748, 2819
HpaI	GTTAAC	1 cut(s)	1156
HpaII	CCGG	4 cut(s)	114, 1822, 1865, 2864
HphI	GGTGA	7 cut(s)	103, 127, 499, 1481, 1742, 1811, 3148
Hpy166II	GTNNAC	9 cut(s)	187, 448, 1156, 1260, 1422, 1581, 1702, 2412, 2795
Hpy8I	GTNNAC	9 cut(s)	187, 448, 1156, 1260, 1422, 1581, 1702, 2412, 2795
HpyCH4III	ACNGT	7 cut(s)	1167, 1257, 2231, 2288, 2656, 2732, 3169
HpyCH4IV	ACGT	7 cut(s)	183, 376, 1903, 1948, 1986, 2955, 3100
HpyF10VI	GCNNNNNNNGC	8 cut(s)	289, 866, 1377, 1445, 1460, 1524, 2705, 2764
HpySE526I	ACGT	7 cut(s)	183, 376, 1903, 1948, 1986, 2955, 3100
HspAI	GCGC	3 cut(s)	99, 779, 3036
Kpn2I	TCCGGA	1 cut(s)	1864
KspAI	GTTAAC	1 cut(s)	1156
LmnI	GCTCC	3 cut(s)	205, 246, 1389
Lsp1109I	GCAGC	6 cut(s)	177, 225, 345, 733, 1778, 1792
LweI	GCATC	9 cut(s)	469, 619, 929, 1426, 2068, 2137, 2470, 2965, 3118
MabI	ACCWGGT	1 cut(s)	2788
MaeI	CTAG	2 cut(s)	162, 2016
MaeII	ACGT	7 cut(s)	183, 376, 1903, 1948, 1986, 2955, 3100
MaeIII	GTNAC	4 cut(s)	505, 1987, 2372, 2513
MfeI	CAATTG	1 cut(s)	1770
MflI	RGATCY	6 cut(s)	796, 979, 1108, 1234, 2983, 3105
MhlI	GDGCHC	1 cut(s)	1878
MlyI	GAGTC	6 cut(s)	206, 1064, 1351, 1576, 1745, 2726
MmeI	TCCRAC	5 cut(s)	234, 291, 354, 1580, 1619
MroI	TCCGGA	1 cut(s)	1864
MroXI	GAANNNNTTC	2 cut(s)	377, 492
MslI	CAYNNNNRTG	3 cut(s)	1366, 2465, 2606
MspA1I	CMGCKG	1 cut(s)	3051
MspI	CCGG	4 cut(s)	114, 1822, 1865, 2864
MunI	CAATTG	1 cut(s)	1770
MvaI	CCWGG	9 cut(s)	1188, 1561, 1665, 2062, 2106, 2269, 2298, 2714, 2790
MvnI	CGCG	1 cut(s)	99
MwoI	GCNNNNNNNGC	8 cut(s)	289, 866, 1377, 1445, 1460, 1524, 2705, 2764
NciI	CCSGG	1 cut(s)	2865
NlaIV	GGNNCC	5 cut(s)	201, 602, 798, 1236, 1391
NmeAIII	GCCGAG	3 cut(s)	40, 176, 3157
NmuCI	GTSAC	3 cut(s)	505, 2372, 2513
NspI	RCATGY	5 cut(s)	902, 1812, 2328, 2936, 3165
NspV	TTCGAA	1 cut(s)	667
PaeI	GCATGC	1 cut(s)	2936
PaeR7I	CTCGAG	1 cut(s)	233
PagI	TCATGA	3 cut(s)	484, 850, 2875
PciI	ACATGT	2 cut(s)	898, 2324
PcsI	WCGNNNNNNNCGW	8 cut(s)	18, 45, 48, 51, 54, 60, 81, 231
PdmI	GAANNNNTTC	2 cut(s)	377, 492
PfeI	GAWTC	4 cut(s)	560, 839, 1040, 1282
PflMI	CCANNNNNTGG	2 cut(s)	546, 1958
PfoI	TCCNGGA	2 cut(s)	2712, 2863
PleI	GAGTC	6 cut(s)	206, 1064, 1351, 1576, 1745, 2725
PpsI	GAGTC	6 cut(s)	206, 1064, 1351, 1576, 1745, 2725
Ppu21I	YACGTR	1 cut(s)	1904
PpuMI	RGGWCCY	2 cut(s)	229, 648
PscI	ACATGT	2 cut(s)	898, 2324
PshBI	ATTAAT	1 cut(s)	636
Psp1406I	AACGTT	1 cut(s)	376
Psp5II	RGGWCCY	2 cut(s)	229, 648
Psp6I	CCWGG	9 cut(s)	1186, 1559, 1663, 2060, 2104, 2267, 2296, 2712, 2788
PspEI	GGTNACC	1 cut(s)	505
PspGI	CCWGG	9 cut(s)	1186, 1559, 1663, 2060, 2104, 2267, 2296, 2712, 2788
PspN4I	GGNNCC	5 cut(s)	201, 602, 798, 1236, 1391
PspPI	GGNCC	8 cut(s)	88, 229, 648, 881, 1253, 1422, 1961, 2342
PspPPI	RGGWCCY	2 cut(s)	229, 648
PspXI	VCTCGAGB	1 cut(s)	233
PstNI	CAGNNNCTG	1 cut(s)	358
PsuI	RGATCY	6 cut(s)	796, 979, 1108, 1234, 2983, 3105
RsaI	GTAC	8 cut(s)	307, 2250, 2319, 2413, 2424, 2565, 3160, 3171
RsaNI	GTAC	8 cut(s)	306, 2249, 2318, 2412, 2423, 2564, 3159, 3170
RseI	CAYNNNNRTG	3 cut(s)	1366, 2465, 2606
SalI	GTCGAC	2 cut(s)	446, 2793
Sau96I	GGNCC	8 cut(s)	88, 229, 648, 881, 1253, 1422, 1961, 2342
SchI	GAGTC	6 cut(s)	206, 1064, 1351, 1576, 1745, 2726
SduI	GDGCHC	1 cut(s)	1878
SexAI	ACCWGGT	1 cut(s)	2788
SfaNI	GCATC	9 cut(s)	469, 619, 929, 1426, 2068, 2137, 2470, 2965, 3118
SfcI	CTRYAG	3 cut(s)	910, 1455, 1488
Sfr274I	CTCGAG	1 cut(s)	233
SfuI	TTCGAA	1 cut(s)	667
SinI	GGWCC	4 cut(s)	229, 648, 1253, 1422
SlaI	CTCGAG	1 cut(s)	233
SmiMI	CAYNNNNRTG	3 cut(s)	1366, 2465, 2606
SmlI	CTYRAG	3 cut(s)	233, 278, 1753
SmoI	CTYRAG	3 cut(s)	233, 278, 1753
SnaBI	TACGTA	1 cut(s)	1904
SphI	GCATGC	1 cut(s)	2936
SsiI	CCGC	8 cut(s)	94, 97, 244, 317, 384, 1921, 2234, 3051
SspI	AATATT	1 cut(s)	1330
SspMI	CTAG	2 cut(s)	162, 2016
StyI	CCWWGG	4 cut(s)	830, 1425, 1957, 2015
TaaI	ACNGT	7 cut(s)	1167, 1257, 2231, 2288, 2656, 2732, 3169
TaiI	ACGT	7 cut(s)	186, 379, 1906, 1951, 1989, 2958, 3103
TaqI	TCGA	9 cut(s)	84, 222, 234, 447, 667, 949, 1073, 1113, 2794
TatI	WGTACW	3 cut(s)	305, 3158, 3169
TauI	GCSGC	4 cut(s)	99, 386, 2237, 3054
TfiI	GAWTC	4 cut(s)	560, 839, 1040, 1282
TscAI	CASTG	6 cut(s)	621, 1347, 1373, 2398, 2539, 3172
TseFI	GTSAC	3 cut(s)	505, 2372, 2513
TseI	GCWGC	6 cut(s)	165, 238, 358, 721, 1766, 1805
Tsp45I	GTSAC	3 cut(s)	505, 2372, 2513
TspGWI	ACGGA	3 cut(s)	1021, 1521, 2335
TspRI	CASTG	6 cut(s)	621, 1347, 1373, 2398, 2539, 3172
Van91I	CCANNNNNTGG	2 cut(s)	546, 1958
VpaK11BI	GGWCC	4 cut(s)	229, 648, 1253, 1422
VspI	ATTAAT	1 cut(s)	636
XagI	CCTNNNNNAGG	1 cut(s)	1148
XapI	RAATTY	6 cut(s)	892, 929, 1089, 2292, 2856, 2917
XceI	RCATGY	5 cut(s)	902, 1812, 2328, 2936, 3165
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1304
XhoI	CTCGAG	1 cut(s)	233
XmaJI	CCTAGG	1 cut(s)	2015
XmiI	GTMKAC	3 cut(s)	186, 447, 2794
XmnI	GAANNNNTTC	2 cut(s)	377, 492
XspI	CTAG	2 cut(s)	162, 2016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.