Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0002490

Physical Location & Seq

Genomic Coordinates Reverse (-)

67492888 .. 67499524

Gene Structure 6637 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005416

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3165 bp

ATGTCTCCTCTCGCCGATAACGACGAGCTCTCTTACTACGACGAGCAAGAAGACGACGACGACGACGACGACGACGATGAGGACGACGGCTTCAACGCCGACATCGAGGCCCTCCGCCGCGCCTGTATGCTCACAGGCAAAGACCCCGACGACATCACCGCCAAAAACGACGACGAAAACCCTAGCAGCAACCAAAACGACGATGTAGACCTCTCCTCGGCTCCCAATTCCGACTCCGACTTCGACGAGGACCTCGAGCTGCTCCGCAAAATCAAGAGCCAATTCTCCAACACTTCTCTCAAGCCTCTTTCGCTGAAGCCTCTCTGTACTCTGCTTCCGCCTTCTGCCTCCGACGAGGAGGAGGACGACTACCAGACGCTGCTCGCCGTCCGGAAACGTTTCGCCGCCTACGAGAACGATACTCAGGAAAAAAGTGCAGAGCAGATTGATCCTTCCTGCAAATCAGTTGAGGAAACTTGCAATGAAGTATCTGGAACTGATGCTCATGAAAGGTTTCTTACTCTGGTCACCGATAATGAAGAGGGACAGCCTTCCACTTCCATTGAGTGGGTTCAGTCAGATTCTTGTGAGCCAACTCTGTTGCCAACCAAAAGTTCAGGGTTCCCAAAGTCTGCACTGGCTTTTCTGGATGCTATTAATAAGAATAGGTCCTGTCAGAAGTTTCTTCGAAGTAAGCTAATACAAATCCAAGCGAAAATTGAGGAGAACAACAAACTGAAGCAGCGTGTCAAAATCCTTAGAGACTTTCAAGCTCATTGCAAAAGACGAACAGGAGAGGCGCTGTCCCAAAAGAAGGATCCTCGTGTCCAGTTAATTTTAACGAAAAAGCCAAGGGCTGATTCAAAGGCTCATGACAGAGCTATCTCAGCTATGTCTTATGGCCCAGAAGAAAATTCACATGTTGCCAACTACAGAAAGGCATCGACAAAATTTCCACTTTCATTAGATCGAAAAAATTGGTCCGAGCTAGAAAAGAAAGATCTTCAAAATGGAATAAGACAGCAATTTCAGGAAATGGTGCTTCAATCTTCTGTAGATGATTCAAGTTATTCTGAGACACCTCATGGAGACTCGAATGACATTGATAAAATTTTGGCTTCAATCAAGGATCTCGAAATTACCCCATATAGCATTAGAGAGTTCCTGCCTAAGGTTAACTGGGAGCAGTTGGCTTCCATGTATGTTCCTGGTCGCTCTGGTGCAGAATGTGAAGCAAGGTGGTTGAACTGGGAGGATCCCTTAATCAATCATGGACCATGGACAACAGATGAGGATAAGACGATTCTGTATCTTGTCCAGAAGAAGAATGGGGTCAATGATTGGAATAATATTGCAGAAGCAGTGGGGACCAACAGGACTCCATTTCAGTGCTTGGCACGCTACCAAAGGAGCCTAAATGCTTCTATACTGAAACGGGAGTGGACCAAGGATGAGGATGCAAAACTTGCTTCTGCTGTAGAAGCTTTTGGTGAGGGTAATTGGCAGTCTGTAGCTTCTGCTTTGAATGGACGAACTGGTACTCAATGCTCTAATAGATGGAAGAAATCACTTCATCCAACCAGGACAAGAGCAGGTAAGTGGACTCCAGAGGAAGACAAACGCCTGATAGTAGCTCAAATGCTTTTTGGGTCAAAAAGTTGGAATAAGACAGCACAGTTTGTGCCAGGCCGAACTCAGGCACAATGCAGAGATAGATATGTCAACTCTTTAGAACCTTCTTTGAGGTGTGGTGAATGGACTGAAGAAGAGGACTCAAGCTTGATAGCAGCAATTGAAGAATACGGACATTGCTGGTCAAAAGTTGCTGCATGTGTGCCTCACCGGACTGATAATATGTGCTGGAGGAGATGGAAGGTGTTGTTTCCGGATGAAGTGCCCTTGCTCAGAGAAGAGAAAAGAATACGTAAGACTGCTCTCATCCGCAACTTTGTTGATCGGGAGAAAGAACGTCCAGCCCTTGGCCCTAATGATTTTCTTCTACAAGATGTTACCTCAATGAAAACTTTAACTTATCCTAGGAAGACGGGTGGATTAAGCCAAGTTCCAAAGAAGATTAAACCCAGGAGGCATAGAAACGATGCTCAACTTTGCTCTGAGGAAGAACCTGGGACAAGCAATTCTGAGGTTGAGACTTATGATGGGGAAGATGCCTCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTTCTTAAGCAGCGTCAAAGAAGGCACAAAGACAATGAACCCACAGGAGACTGTGAGGCTGTTGTACCTGTACCAAAGAAGATTAGACCCAGGAGGAATAGAAACAATGGTCAAATTCCTGGGATAAGCAATTCTGAGGTTCAGACATGTGATGGGGATGATGGCCCGAAGAAGAAGAAAGTTCTTAAACAGCGTCACAGAAGGCACAAAGGCACTGAACTAACAGGAGAGTGTAAGGCTATTGTACCTGTTAGTAATGAGGATGACGCACACAAAGAACCCACAGAAATGTCTTGTTCAGATGCCCTGAAGAAGAAGAAAGTTCTTAAACATCGTCACAGAAAGCACAAAGGCACTGAACCAACAGGAGAATGTAAGGCTATTGTACCTGTTAGTTATGAGGATGACGCACGCAAAGAACCCACAGCGATGTCTTATTCAGATCAAATCATAGGAACATCAGATGAAGATGATACTGTTTCTTACTATCTACATAAATCAAGGAAGAGAAAGCTTGAAGCTGATCTGGCTGTCCAGGAGTCCCCCTTCTACTGTATAAGGGATCGTGAAGCTTTAATGCAACATGAGCCAGCCATAGCTTGCAATAAACCTAGTCGACGAAAATTAGTCAGAGGGCAAAAGCTTGGCCTCCAAGAACCAATGAGGGGAGTGTTGAGAATTTGTCCAGGAAGTGATCATGAGACTGATGATCCTGTTGTGGCTTCCACGGGGAAAAAGAATTCAAAGAAGAGGCATGCTCAAACTACCAAACGGCATGCCATTTGTAATGATCCCGATGCAGGAGATCTACCTAAACAAGAGGTCACAATCAAATCTGGGAAGGAACAAGTGAGCGCTGGTGTGGACAGCAGTGATGATATAACACTTGCTTGTTTTCTTAATAGATTAAAGAAGCGACGTGAATCTGGCAGAGGAGATATTCAGATGCCGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0048285 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051225 GO:0051252 GO:0060255 GO:0065007 GO:0070925 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0140014 GO:0140110 GO:1901363 GO:1902850 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

1055

Amino Acids

119.68

Weight (kDa)

7.66

Isoelectric Point (pI)

52.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	425 - 470	5.1e-10	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	427 - 486	1.1e-13	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	478 - 522	7e-14	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	481 - 530	2.1e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	532 - 575	4.6e-12	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	534 - 591	2.8e-12	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	584 - 625	2.9e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	586 - 629	7.4e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002490)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18100 AT3G18100 AT3G18100 AT3G18100
fragaria_vesca	FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070
malus_domestica	MD14G1233900.v1.1
prunus_persica	Prupe.5G230100_v2.0.a1 Prupe.5G230100_v2.0.a1
pyrus_communis	pycom14g19490
rosa_chinensis	RchiOBHm_Chr7g0178781 RchiOBHm_Chr7g0230201
rosa_laevigata	RLG00000005416
rosa_multiflora	Rmu_sc0001901.1_g000001 Rmu_sc0002822.1_g000027 Rmu_sc0004110.1_g000007 Rmu_sc0004110.1_g000008 Rmu_sc0015029.1_g000002 Rmu_sc0025325.1_g000009
rosa_roxburghii	Rroxscaffold_3G00230300 Rroxscaffold_3G00274620
rosa_rugosa	Rorug06G0419400 Rorug06G0419500 Rorug06G0419600
rosa_samantha	Rh7AG018900 Rh7AG408900 Rh7AG409000 Rh7BG018200 Rh7BG388800 Rh7CG019000 Rh7DG018800 Rh7DG406800
rosa_wichuraiana	Rw0G022580 Rw0G022590 Rw7G001530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1583
AccB7I	CCANNNNNTGG	2 cut(s)	567, 1979
AccI	GTMKAC	2 cut(s)	207, 2824
AccII	CGCG	1 cut(s)	120
AccIII	TCCGGA	2 cut(s)	390, 1885
AciI	CCGC	7 cut(s)	115, 118, 159, 265, 338, 405, 1942
AclI	AACGTT	1 cut(s)	397
AclWI	GGATC	9 cut(s)	443, 812, 825, 1137, 1250, 1263, 2778, 2912, 2993
AcsI	RAATTY	6 cut(s)	913, 950, 1110, 2322, 2886, 2947
AcuI	CTGAAG	4 cut(s)	335, 758, 1782, 2537
AfaI	GTAC	6 cut(s)	328, 1540, 2274, 2280, 2454, 2595
AfeI	AGCGCT	1 cut(s)	3064
AfiI	CCNNNNNNNGG	8 cut(s)	217, 567, 814, 1171, 1696, 1979, 2873, 3008
AflII	CTTAAG	1 cut(s)	2213
AflIII	ACRYGT	2 cut(s)	919, 2354
AjiI	CACGTC	1 cut(s)	3128
AjnI	CCWGG	9 cut(s)	1207, 1580, 1684, 2081, 2125, 2297, 2326, 2742, 2893
AjuI	GAANNNNNNNTTGG	4 cut(s)	598, 630, 844, 876
Alw21I	GWGCWC	1 cut(s)	30
Alw26I	GTCTC	7 cut(s)	9, 756, 1070, 1083, 2144, 2250, 2903
AlwI	GGATC	9 cut(s)	443, 812, 825, 1137, 1250, 1263, 2778, 2912, 2993
AlwNI	CAGNNNCTG	1 cut(s)	379
Ama87I	CYCGRG	1 cut(s)	254
Aor13HI	TCCGGA	2 cut(s)	390, 1885
Aor51HI	AGCGCT	1 cut(s)	3064
AoxI	GGCC	6 cut(s)	108, 901, 1687, 1981, 2371, 2854
ApeKI	GCWGC	7 cut(s)	186, 259, 379, 742, 1787, 1826, 2218
ApoI	RAATTY	6 cut(s)	913, 950, 1110, 2322, 2886, 2947
ArsI	GACNNNNNNTTYG	2 cut(s)	224, 256
AseI	ATTAAT	1 cut(s)	657
Asp700I	GAANNNNTTC	2 cut(s)	398, 513
AspA2I	CCTAGG	1 cut(s)	2036
AspLEI	GCGC	3 cut(s)	122, 802, 3065
AsuHPI	GGTGA	5 cut(s)	148, 520, 1502, 1763, 1832
AsuII	TTCGAA	1 cut(s)	688
AvaI	CYCGRG	1 cut(s)	254
AvaII	GGWCC	6 cut(s)	250, 669, 981, 1274, 1368, 1443
AvrII	CCTAGG	1 cut(s)	2036
AxyI	CCTNAGG	1 cut(s)	1170
BaeGI	GKGCMC	1 cut(s)	1899
BamHI	GGATCC	2 cut(s)	817, 1255
BanII	GRGCYC	1 cut(s)	30
BauI	CACGAG	1 cut(s)	822
BbsI	GAAGAC	3 cut(s)	57, 1620, 2048
Bbv12I	GWGCWC	1 cut(s)	30
BbvI	GCAGC	7 cut(s)	198, 246, 366, 754, 1799, 1813, 2230
BccI	CCATC	5 cut(s)	1551, 1863, 2153, 2354, 2363
BceAI	ACGGC	3 cut(s)	103, 371, 2996
BciT130I	CCWGG	9 cut(s)	1209, 1582, 1686, 2083, 2127, 2299, 2328, 2744, 2895
BclI	TGATCA	1 cut(s)	2902
BcoDI	GTCTC	7 cut(s)	9, 756, 1070, 1083, 2144, 2250, 2903
BfaI	CTAG	4 cut(s)	183, 989, 2037, 2820
BfmI	CTRYAG	4 cut(s)	931, 1053, 1476, 1509
BfoI	RGCGCY	2 cut(s)	803, 3066
BfrI	CTTAAG	1 cut(s)	2213
BfuAI	ACCTGC	1 cut(s)	1583
BglII	AGATCT	2 cut(s)	1000, 3013
BisI	GCNGC	9 cut(s)	118, 187, 260, 380, 405, 743, 1788, 1827, 2219
BlnI	CCTAGG	1 cut(s)	2036
BlsI	GCNGC	9 cut(s)	119, 188, 261, 381, 406, 744, 1789, 1828, 2220
Bme1390I	CCNGG	9 cut(s)	1209, 1582, 1686, 2083, 2127, 2299, 2328, 2744, 2895
Bme18I	GGWCC	6 cut(s)	250, 669, 981, 1274, 1368, 1443
BmeT110I	CYCGRG	1 cut(s)	254
BmgBI	CACGTC	1 cut(s)	3128
BmiI	GGNNCC	6 cut(s)	222, 623, 819, 1257, 1369, 1412
BmrFI	CCNGG	9 cut(s)	1209, 1582, 1686, 2083, 2127, 2299, 2328, 2744, 2895
BmrI	ACTGGG	2 cut(s)	1189, 1258
BmsI	GCATC	9 cut(s)	490, 640, 950, 1447, 2089, 2158, 2500, 2995, 3144
BmuI	ACTGGG	2 cut(s)	1189, 1258
BpiI	GAAGAC	3 cut(s)	57, 1620, 2048
BplI	GAGNNNNNCTC	2 cut(s)	2950, 2982
BpmI	CTGGAG	2 cut(s)	1590, 1882
Bpu14I	TTCGAA	1 cut(s)	688
BpuEI	CTTGAG	2 cut(s)	284, 1759
BsaAI	YACGTR	1 cut(s)	1925
BsaWI	WCCGGW	3 cut(s)	390, 1842, 1885
Bsc4I	CCNNNNNNNGG	8 cut(s)	217, 567, 814, 1171, 1696, 1979, 2873, 3008
Bse1I	ACTGG	5 cut(s)	642, 829, 1184, 1253, 1540
Bse21I	CCTNAGG	1 cut(s)	1170
Bse3DI	GCAATG	3 cut(s)	487, 775, 1807
BseAI	TCCGGA	2 cut(s)	390, 1885
BseBI	CCWGG	9 cut(s)	1209, 1582, 1686, 2083, 2127, 2299, 2328, 2744, 2895
BseGI	GGATG	9 cut(s)	655, 1456, 1462, 1573, 1894, 1938, 2371, 2476, 2617
BseLI	CCNNNNNNNGG	8 cut(s)	217, 567, 814, 1171, 1696, 1979, 2873, 3008
BseMI	GCAATG	3 cut(s)	487, 775, 1807
BseMII	CTCAG	8 cut(s)	437, 900, 1065, 1709, 1918, 2106, 2133, 2334
BseNI	ACTGG	5 cut(s)	642, 829, 1184, 1253, 1540
BseRI	GAGGAG	6 cut(s)	205, 371, 374, 737, 1879, 3156
BseSI	GKGCMC	1 cut(s)	1899
BseXI	GCAGC	7 cut(s)	198, 246, 366, 754, 1799, 1813, 2230
BsgI	GTGCAG	3 cut(s)	456, 618, 1242
Bsh1236I	CGCG	1 cut(s)	120
BshFI	GGCC	6 cut(s)	110, 903, 1689, 1983, 2373, 2856
BsiHKAI	GWGCWC	1 cut(s)	30
BsiHKCI	CYCGRG	1 cut(s)	254
BsiSI	CCGG	3 cut(s)	391, 1843, 1886
BslFI	GGGAC	5 cut(s)	558, 790, 1381, 2143, 2734
BslI	CCNNNNNNNGG	8 cut(s)	217, 567, 814, 1171, 1696, 1979, 2873, 3008
BsmAI	GTCTC	7 cut(s)	9, 756, 1070, 1083, 2144, 2250, 2903
BsmFI	GGGAC	5 cut(s)	558, 790, 1381, 2143, 2734
BsnI	GGCC	6 cut(s)	110, 903, 1689, 1983, 2373, 2856
BsoBI	CYCGRG	1 cut(s)	254
Bsp119I	TTCGAA	1 cut(s)	688
Bsp1286I	GDGCHC	2 cut(s)	30, 1899
Bsp13I	TCCGGA	2 cut(s)	390, 1885
Bsp19I	CCATGG	1 cut(s)	1277
BspACI	CCGC	7 cut(s)	115, 118, 159, 265, 338, 405, 1942
BspANI	GGCC	6 cut(s)	110, 903, 1689, 1983, 2373, 2856
BspCNI	CTCAG	8 cut(s)	436, 899, 1066, 1708, 1917, 2107, 2134, 2335
BspEI	TCCGGA	2 cut(s)	390, 1885
BspFNI	CGCG	1 cut(s)	120
BspHI	TCATGA	3 cut(s)	505, 871, 2905
BspLI	GGNNCC	6 cut(s)	222, 623, 819, 1257, 1369, 1412
BspMI	ACCTGC	1 cut(s)	1583
BspPI	GGATC	9 cut(s)	443, 812, 825, 1137, 1250, 1263, 2778, 2912, 2993
BspT104I	TTCGAA	1 cut(s)	688
BspTI	CTTAAG	1 cut(s)	2213
BsrDI	GCAATG	3 cut(s)	487, 775, 1807
BsrI	ACTGG	5 cut(s)	642, 829, 1184, 1253, 1540
BssSI	CACGAG	1 cut(s)	822
BssT1I	CCWWGG	5 cut(s)	851, 1277, 1446, 1978, 2036
Bst2BI	CACGAG	1 cut(s)	822
Bst2UI	CCWGG	9 cut(s)	1209, 1582, 1686, 2083, 2127, 2299, 2328, 2744, 2895
Bst4CI	ACNGT	4 cut(s)	1677, 2261, 2686, 2762
Bst6I	CTCTTC	5 cut(s)	534, 1761, 1905, 2708, 2951
BstAFI	CTTAAG	1 cut(s)	2213
BstAPI	GCANNNNNTGC	1 cut(s)	1466
BstBAI	YACGTR	1 cut(s)	1925
BstBI	TTCGAA	1 cut(s)	688
BstC8I	GCNNGC	7 cut(s)	384, 1399, 2620, 2799, 2809, 2964, 2985
BstDSI	CCRYGG	2 cut(s)	1277, 2934
BstEII	GGTNACC	1 cut(s)	526
BstENI	CCTNNNNNAGG	1 cut(s)	1169
BstF5I	GGATG	9 cut(s)	655, 1456, 1462, 1573, 1894, 1938, 2371, 2476, 2617
BstFNI	CGCG	1 cut(s)	120
BstH2I	RGCGCY	2 cut(s)	803, 3066
BstHHI	GCGC	3 cut(s)	122, 802, 3065
BstMAI	GTCTC	7 cut(s)	9, 756, 1070, 1083, 2144, 2250, 2903
BstMWI	GCNNNNNNNGC	7 cut(s)	310, 887, 1398, 1466, 1481, 2735, 2794
BstNI	CCWGG	9 cut(s)	1209, 1582, 1686, 2083, 2127, 2299, 2328, 2744, 2895
BstNSI	RCATGY	5 cut(s)	923, 1833, 2358, 2966, 2987
BstPI	GGTNACC	1 cut(s)	526
BstSCI	CCNGG	9 cut(s)	1207, 1580, 1684, 2081, 2125, 2297, 2326, 2742, 2893
BstSFI	CTRYAG	4 cut(s)	931, 1053, 1476, 1509
BstSLI	GKGCMC	1 cut(s)	1899
BstSNI	TACGTA	1 cut(s)	1925
BstUI	CGCG	1 cut(s)	120
BstV1I	GCAGC	7 cut(s)	198, 246, 366, 754, 1799, 1813, 2230
BstV2I	GAAGAC	3 cut(s)	57, 1620, 2048
BstX2I	RGATCY	5 cut(s)	817, 1000, 1129, 1255, 3013
BstYI	RGATCY	5 cut(s)	817, 1000, 1129, 1255, 3013
Bsu36I	CCTNAGG	1 cut(s)	1170
BsuRI	GGCC	6 cut(s)	110, 903, 1689, 1983, 2373, 2856
BtgI	CCRYGG	2 cut(s)	1277, 2934
BtgZI	GCGATG	1 cut(s)	2651
BtrI	CACGTC	1 cut(s)	3128
BtsCI	GGATG	9 cut(s)	655, 1456, 1462, 1573, 1894, 1938, 2371, 2476, 2617
BtsI	GCAGTG	2 cut(s)	1368, 3085
BtsIMutI	CAGTG	6 cut(s)	635, 1368, 1394, 2421, 2562, 3085
BveI	ACCTGC	1 cut(s)	1583
Cac8I	GCNNGC	7 cut(s)	384, 1399, 2620, 2799, 2809, 2964, 2985
CaiI	CAGNNNCTG	1 cut(s)	379
CciI	TCATGA	3 cut(s)	505, 871, 2905
CfoI	GCGC	3 cut(s)	122, 802, 3065
CseI	GACGC	5 cut(s)	385, 2210, 2390, 2483, 2624
Csp6I	GTAC	6 cut(s)	327, 1539, 2273, 2279, 2453, 2594
CspCI	CAANNNNNGTGG	2 cut(s)	544, 579
CviQI	GTAC	6 cut(s)	327, 1539, 2273, 2279, 2453, 2594
Eam1104I	CTCTTC	5 cut(s)	534, 1761, 1905, 2708, 2951
EarI	CTCTTC	5 cut(s)	534, 1761, 1905, 2708, 2951
EciI	GGCGGA	2 cut(s)	104, 327
Ecl136II	GAGCTC	1 cut(s)	28
Eco105I	TACGTA	1 cut(s)	1925
Eco130I	CCWWGG	5 cut(s)	851, 1277, 1446, 1978, 2036
Eco24I	GRGCYC	1 cut(s)	30
Eco47I	GGWCC	6 cut(s)	250, 669, 981, 1274, 1368, 1443
Eco47III	AGCGCT	1 cut(s)	3064
Eco53kI	GAGCTC	1 cut(s)	28
Eco57I	CTGAAG	4 cut(s)	335, 758, 1782, 2537
Eco81I	CCTNAGG	1 cut(s)	1170
Eco88I	CYCGRG	1 cut(s)	254
Eco91I	GGTNACC	1 cut(s)	526
EcoICRI	GAGCTC	1 cut(s)	28
EcoNI	CCTNNNNNAGG	1 cut(s)	1169
EcoO109I	RGGNCCY	3 cut(s)	109, 250, 669
EcoO65I	GGTNACC	1 cut(s)	526
EcoRI	GAATTC	1 cut(s)	2947
EcoRII	CCWGG	9 cut(s)	1207, 1580, 1684, 2081, 2125, 2297, 2326, 2742, 2893
EcoT14I	CCWWGG	5 cut(s)	851, 1277, 1446, 1978, 2036
EcoT38I	GRGCYC	1 cut(s)	30
ErhI	CCWWGG	5 cut(s)	851, 1277, 1446, 1978, 2036
FaqI	GGGAC	5 cut(s)	558, 790, 1381, 2143, 2734
FbaI	TGATCA	1 cut(s)	2902
FblI	GTMKAC	2 cut(s)	207, 2824
Fnu4HI	GCNGC	9 cut(s)	118, 187, 260, 380, 405, 743, 1788, 1827, 2219
FokI	GGATG	9 cut(s)	662, 1463, 1469, 1560, 1901, 1925, 2378, 2483, 2624
FriOI	GRGCYC	1 cut(s)	30
Fsp4HI	GCNGC	9 cut(s)	118, 187, 260, 380, 405, 743, 1788, 1827, 2219
FspBI	CTAG	4 cut(s)	183, 989, 2037, 2820
GlaI	GCGC	3 cut(s)	121, 801, 3064
GluI	GCNGC	9 cut(s)	118, 187, 260, 380, 405, 743, 1788, 1827, 2219
GsuI	CTGGAG	2 cut(s)	1590, 1882
HaeII	RGCGCY	2 cut(s)	803, 3066
HaeIII	GGCC	6 cut(s)	110, 903, 1689, 1983, 2373, 2856
HapII	CCGG	3 cut(s)	391, 1843, 1886
HgaI	GACGC	5 cut(s)	385, 2210, 2390, 2483, 2624
HhaI	GCGC	3 cut(s)	122, 802, 3065
Hin6I	GCGC	3 cut(s)	120, 800, 3063
HinP1I	GCGC	3 cut(s)	120, 800, 3063
HincII	GTYRAC	3 cut(s)	1177, 1723, 2825
HindII	GTYRAC	3 cut(s)	1177, 1723, 2825
HindIII	AAGCTT	5 cut(s)	1482, 1777, 2720, 2778, 2849
HpaI	GTTAAC	1 cut(s)	1177
HpaII	CCGG	3 cut(s)	391, 1843, 1886
HphI	GGTGA	5 cut(s)	148, 520, 1502, 1763, 1832
Hpy166II	GTNNAC	7 cut(s)	208, 1177, 1443, 1602, 1723, 2825, 3073
Hpy8I	GTNNAC	7 cut(s)	208, 1177, 1443, 1602, 1723, 2825, 3073
HpyCH4III	ACNGT	4 cut(s)	1677, 2261, 2686, 2762
HpyCH4IV	ACGT	4 cut(s)	397, 1924, 1969, 3127
HpyF10VI	GCNNNNNNNGC	7 cut(s)	310, 887, 1398, 1466, 1481, 2735, 2794
HpySE526I	ACGT	4 cut(s)	397, 1924, 1969, 3127
HspAI	GCGC	3 cut(s)	120, 800, 3063
Kpn2I	TCCGGA	2 cut(s)	390, 1885
Ksp22I	TGATCA	1 cut(s)	2902
KspAI	GTTAAC	1 cut(s)	1177
LmnI	GCTCC	4 cut(s)	226, 267, 1183, 1410
Lsp1109I	GCAGC	7 cut(s)	198, 246, 366, 754, 1799, 1813, 2230
LweI	GCATC	9 cut(s)	490, 640, 950, 1447, 2089, 2158, 2500, 2995, 3144
MaeI	CTAG	4 cut(s)	183, 989, 2037, 2820
MaeII	ACGT	4 cut(s)	397, 1924, 1969, 3127
MaeIII	GTNAC	5 cut(s)	526, 2008, 2402, 2543, 3031
MfeI	CAATTG	1 cut(s)	1791
MflI	RGATCY	5 cut(s)	817, 1000, 1129, 1255, 3013
MhlI	GDGCHC	2 cut(s)	30, 1899
MlyI	GAGTC	6 cut(s)	227, 1085, 1372, 1597, 1766, 2756
MmeI	TCCRAC	6 cut(s)	255, 261, 312, 375, 1601, 1640
MroI	TCCGGA	2 cut(s)	390, 1885
MroXI	GAANNNNTTC	2 cut(s)	398, 513
MslI	CAYNNNNRTG	3 cut(s)	1387, 2495, 2636
MspCI	CTTAAG	1 cut(s)	2213
MspI	CCGG	3 cut(s)	391, 1843, 1886
MspR9I	CCNGG	9 cut(s)	1209, 1582, 1686, 2083, 2127, 2299, 2328, 2744, 2895
MunI	CAATTG	1 cut(s)	1791
MvaI	CCWGG	9 cut(s)	1209, 1582, 1686, 2083, 2127, 2299, 2328, 2744, 2895
MvnI	CGCG	1 cut(s)	120
MwoI	GCNNNNNNNGC	7 cut(s)	310, 887, 1398, 1466, 1481, 2735, 2794
NcoI	CCATGG	1 cut(s)	1277
NlaIV	GGNNCC	6 cut(s)	222, 623, 819, 1257, 1369, 1412
NmeAIII	GCCGAG	1 cut(s)	197
NmuCI	GTSAC	4 cut(s)	526, 2402, 2543, 3031
NspI	RCATGY	5 cut(s)	923, 1833, 2358, 2966, 2987
NspV	TTCGAA	1 cut(s)	688
PaeI	GCATGC	2 cut(s)	2966, 2987
PaeR7I	CTCGAG	1 cut(s)	254
PagI	TCATGA	3 cut(s)	505, 871, 2905
PciI	ACATGT	2 cut(s)	919, 2354
PdmI	GAANNNNTTC	2 cut(s)	398, 513
PfeI	GAWTC	5 cut(s)	581, 860, 1061, 1303, 3131
PflMI	CCANNNNNTGG	2 cut(s)	567, 1979
PfoI	TCCNGGA	2 cut(s)	2742, 2893
PkrI	GCNGC	9 cut(s)	119, 188, 261, 381, 406, 744, 1789, 1828, 2220
PleI	GAGTC	6 cut(s)	227, 1085, 1372, 1597, 1766, 2755
PpsI	GAGTC	6 cut(s)	227, 1085, 1372, 1597, 1766, 2755
Ppu21I	YACGTR	1 cut(s)	1925
PpuMI	RGGWCCY	2 cut(s)	250, 669
PscI	ACATGT	2 cut(s)	919, 2354
PshBI	ATTAAT	1 cut(s)	657
Psp124BI	GAGCTC	1 cut(s)	30
Psp1406I	AACGTT	1 cut(s)	397
Psp5II	RGGWCCY	2 cut(s)	250, 669
Psp6I	CCWGG	9 cut(s)	1207, 1580, 1684, 2081, 2125, 2297, 2326, 2742, 2893
PspEI	GGTNACC	1 cut(s)	526
PspGI	CCWGG	9 cut(s)	1207, 1580, 1684, 2081, 2125, 2297, 2326, 2742, 2893
PspN4I	GGNNCC	6 cut(s)	222, 623, 819, 1257, 1369, 1412
PspPPI	RGGWCCY	2 cut(s)	250, 669
PspXI	VCTCGAGB	1 cut(s)	254
PstNI	CAGNNNCTG	1 cut(s)	379
PsuI	RGATCY	5 cut(s)	817, 1000, 1129, 1255, 3013
RsaI	GTAC	6 cut(s)	328, 1540, 2274, 2280, 2454, 2595
RsaNI	GTAC	6 cut(s)	327, 1539, 2273, 2279, 2453, 2594
RseI	CAYNNNNRTG	3 cut(s)	1387, 2495, 2636
SacI	GAGCTC	1 cut(s)	30
SalI	GTCGAC	1 cut(s)	2823
SatI	GCNGC	9 cut(s)	118, 187, 260, 380, 405, 743, 1788, 1827, 2219
SchI	GAGTC	6 cut(s)	227, 1085, 1372, 1597, 1766, 2756
ScrFI	CCNGG	9 cut(s)	1209, 1582, 1686, 2083, 2127, 2299, 2328, 2744, 2895
SduI	GDGCHC	2 cut(s)	30, 1899
SfaNI	GCATC	9 cut(s)	490, 640, 950, 1447, 2089, 2158, 2500, 2995, 3144
SfcI	CTRYAG	4 cut(s)	931, 1053, 1476, 1509
Sfr274I	CTCGAG	1 cut(s)	254
SfuI	TTCGAA	1 cut(s)	688
SinI	GGWCC	6 cut(s)	250, 669, 981, 1274, 1368, 1443
SlaI	CTCGAG	1 cut(s)	254
SmiMI	CAYNNNNRTG	3 cut(s)	1387, 2495, 2636
SmlI	CTYRAG	4 cut(s)	254, 299, 1774, 2213
SmoI	CTYRAG	4 cut(s)	254, 299, 1774, 2213
SnaBI	TACGTA	1 cut(s)	1925
SphI	GCATGC	2 cut(s)	2966, 2987
SsiI	CCGC	7 cut(s)	115, 118, 159, 265, 338, 405, 1942
SspI	AATATT	1 cut(s)	1351
SspMI	CTAG	4 cut(s)	183, 989, 2037, 2820
SstI	GAGCTC	1 cut(s)	30
StyD4I	CCNGG	9 cut(s)	1207, 1580, 1684, 2081, 2125, 2297, 2326, 2742, 2893
StyI	CCWWGG	5 cut(s)	851, 1277, 1446, 1978, 2036
TaaI	ACNGT	4 cut(s)	1677, 2261, 2686, 2762
TaiI	ACGT	4 cut(s)	400, 1927, 1972, 3130
TaqI	TCGA	9 cut(s)	105, 243, 255, 688, 944, 970, 1094, 1134, 2824
TatI	WGTACW	1 cut(s)	326
TauI	GCSGC	2 cut(s)	120, 407
TfiI	GAWTC	5 cut(s)	581, 860, 1061, 1303, 3131
TscAI	CASTG	6 cut(s)	642, 1368, 1394, 2428, 2569, 3085
TseFI	GTSAC	4 cut(s)	526, 2402, 2543, 3031
TseI	GCWGC	7 cut(s)	186, 259, 379, 742, 1787, 1826, 2218
Tsp45I	GTSAC	4 cut(s)	526, 2402, 2543, 3031
TspDTI	ATGAA	9 cut(s)	498, 522, 552, 951, 1562, 1905, 2033, 2259, 2688
TspGWI	ACGGA	1 cut(s)	1818
TspRI	CASTG	6 cut(s)	642, 1368, 1394, 2428, 2569, 3085
Van91I	CCANNNNNTGG	2 cut(s)	567, 1979
Vha464I	CTTAAG	1 cut(s)	2213
VpaK11BI	GGWCC	6 cut(s)	250, 669, 981, 1274, 1368, 1443
VspI	ATTAAT	1 cut(s)	657
XagI	CCTNNNNNAGG	1 cut(s)	1169
XapI	RAATTY	6 cut(s)	913, 950, 1110, 2322, 2886, 2947
XceI	RCATGY	5 cut(s)	923, 1833, 2358, 2966, 2987
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1325
XhoI	CTCGAG	1 cut(s)	254
XmaJI	CCTAGG	1 cut(s)	2036
XmiI	GTMKAC	2 cut(s)	207, 2824
XmnI	GAANNNNTTC	2 cut(s)	398, 513
XspI	CTAG	4 cut(s)	183, 989, 2037, 2820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.