Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002490

Physical Location & Seq

Genomic Coordinates Forward (+)

1333008 .. 1340379

Gene Structure 7372 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ15933

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3060 bp

ATGTCTCCTCTCGCCGAGAACGACGAGCTTTCTTACTACGACGAACAAGACGACGAAGACGACGATGATGACGACGGCTTCAACGCCGACATCGAGGCCCTCCGTCGCGCCTGTATGCTCACCGGCAAAGACCCCGACGACATCACCACCAAAAACGACGACGAAAACCCTAGCAGCAACCAAAACGACGACGTAGACCTCTCCTCGGCTCCCAATTCCGACTCCGATTTCGACGAGGACCTCGAGCTGCTCCGCAAAATCAAGAGCCAATTCTCCAACACTTCTCTCAAGCCTCTTTCGCTGAAGCCTCTCTGTACTTTGCTTCCGCCTTCTGCCTCCGACGAGGAGGAGGACGACTACCAGACGCTGCTCGCCGTTCGGAAACGTTTCGCCGCCTACGAGAACGATACTCAGGAAAAAAGTGCAGAGCAGATTGATCCTTCTTGCAAATCAGTTGAGGAAACTTGCAATGAAGTACCTGGAACTGATGCTCATGAAAGGTTTCTTACTCTGGTCACCGATAATGAAGAGGGACAGCCTTCCACTTCCATTGAGTGGGTTCAGTCAGATTCTTGTGAGCCAACTCTGTTGCCAACCAAAAGTTCAGGGTTCCCAAAGTCTGCACTGGCTTTTCTGGATGCTATTAATAAGAATAGGTCCTGTCAGAAGTTTCTTCGAAGTAAGCTTATCCAAATCCAAGCGAAAATTGAGGAGAACAACAAACTGAAGCAGCGTGTCAAAATCCTTAGAGACTTTCAAGCTCATTGCAAAAGACGAACAGGAGAGGCGCTGTCCCAAAAGAAGGATCCTCGTGTCCAGTTAATTTTAACGAAAAAGCCAAGGGCTGATTCAAAGGCTCATGACAGAGCTATCTCAGCTATGTCTTATGGCCCAGAAGAAAATTCACATGTTGCCAACTACAGAAAGGCATCAACAAAATTTCCACTTTCATTAGATCGAAAAAATTGGTCAGAGGTAGAAAAGAAAGATCTTCAAAATGGAATAAGACAGCAATTTCAGGAAATGGTGCTTCAATCTTCCGTAGATGATTCAAGTTATTCTGAGACACCTGATGGAGACTCGAATGACATTGATAAAATTTTGGCTTCAATCAAGGATCTCGAAATTACCCCATATAGCATTAGAGAGTTCCTGCCTAAGGTTAACTGGGAGCAGTTGGCTTCCATGTATGTTCCTGGTCGCTCTGGTGGAGAATGTGAAGCAAGGTGGTTGAACTGGGAGGATCCCTTAATCAGTCATGGACCGTGGACAACAGATGAGGATAAGACGATTCTGTATCTTGTCCAGAAGAAGAATGGGGTCAATGATTGGAATAATATTGCAGAAGCAGTGGGGACTAACAGGACTCCATTTCAGTGCTTGGCACGCTACCAAAGGAGCCTAAATGCTTCCATACTGAAACGGGAGTGGACCAAGGATGAGGATGCAAAACTTGCTTCTGCTGTAGAAGCTTTTGGTGAGGGTAATTGGCAGTCTGTAGCTTCTGCTTTGAACGGACGAACTGGTACTCAATGCTCTAATAGATGGAAGAAATCACTTCATCCAACCAGGACAAGAGCAGGTAAGTGGACTCCAGAGGAAGACAAACGCCTGATAGTAGCTCAAATGCTTTTTGGGTCAAAAAGTTGGAATAAGACAGCTCAGTTTGTGCCAGGCCGAACTCAGGCACAATGCAGAGATAGATATGTCAACTCTTTAGAACCTTCTTTGAGGTGTGGTGAATGGACTGAAGAAGAGGACTCAAGGTTGATAGCAGCAATTGAAGAATATGGACATTGCTGGTCAAAAGTTGCTGCATGTGTGCCTCACCGGACTGATAATATGTGCTGGAGGAGATGGAAGGTGTTGTTTCCGGATGAAGTGCCCTTGCTCAGAGAAGAGAAAAGAATACGTAAGACTGCTCTCATCCGCAACTTTGTTGATCGGGAGAAAGAACGTCCAGCCCTTGGCCCTAATGATTTTCTTCTACAAGATGTTACCTCAATGAAAACTTTAACTTATCCTAGGAAGACGGGAGGATTAAGCCAAGTTCCAAAGAAGATTAAACCCAGGAGGCATAGAAACGATTCTCAACTTTGCTCTGAGGAAGAACCTGGGACAAGCAATTCTGAGGTTGAGACTTATGATGGGGAAGATGCCTCAAAGAAGAAGAAGAAGAAGAAGAAGAAAGTTCTTAAACAGCGTCAAAGAAGGCACAAAGACAATGAACCCACAGGAGACTGTGCGGCTGTTGTGCCTGTACCAAAGAAGATTAGACCCAGGAGGAACAGAAACAACGGTCAAATTCCTGGGATAAGCGATTCTGAGGTACGGACATGTGATGGGGATGATGGCCCGAAGAAGAAGAAAGTTCTTAAACAGCGTTACAGAAGGCACAAAGGCACTGAACTAACAGGAGAGTGTAAGGCTATTGTACCTGTTAGTAATGAGGATGACGCACACAAAGAACCTACAGAAATGTCTTGTTCAGATGCCCTGAAGAAGAAGAAAGTTCTGAAACATCGTCACAGAAAGCACAGAGGCACTGAACCAACAGGAGAGTGTAAGGCTATTGTACCTGTTAGTAATGAGGATGACGTGCGCAAAGAACCCACAGCGATGTCTTATTCAGATCAAATCATAGGAACATCAGATGAAGATGATACTGTTTCTTTCTATCTACATAAATCAAGGAAGAGAAAGCTTGAAGCTGGTCGACGAAAATTAGTCAGAGGGCAAAAGCTTGGCCTCCAAGAACCAATGAGGGGAGTGTTGAGAATTTGTCCAGGAAGTGATCATGAGACTGATGATCCTGTTGTGGCTTCCATGGGGAAAAAGTATACAAAGAAGAGGCATGCTCAAACTACCAAACAGCACGTCATTTGTAATGATCCCGATGCAGGAGATCTACCTAAACAAGAGGAGGTCACAATCAAACCTGGGAAGGAACAAGTGAGTGCTGGTGCAGACAGCGGCGATGATATAACACTTGCTTGTTTTCTTAATAGATTAAAGAAGCGACGTGAATCTGGCAGAGGAGATATTCAGATGCCGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022402 GO:0022607 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044212 GO:0044424 GO:0044464 GO:0048285 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051225 GO:0051252 GO:0060255 GO:0065007 GO:0070925 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0140014 GO:0140110 GO:1901363 GO:1902850 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

1019

Amino Acids

115.72

Weight (kDa)

8.11

Isoelectric Point (pI)

51.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	421 - 466	4.9e-10	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	423 - 482	1e-13	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	474 - 518	6.8e-14	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	477 - 526	2e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	528 - 571	4.5e-12	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	530 - 586	1.2e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	580 - 621	1e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	582 - 625	2.2e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002490)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18100 AT3G18100 AT3G18100 AT3G18100
fragaria_vesca	FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070 FvH4_5g17070
malus_domestica	MD14G1233900.v1.1
prunus_persica	Prupe.5G230100_v2.0.a1 Prupe.5G230100_v2.0.a1
pyrus_communis	pycom14g19490
rosa_chinensis	RchiOBHm_Chr7g0178781 RchiOBHm_Chr7g0230201
rosa_laevigata	RLG00000005416
rosa_multiflora	Rmu_sc0001901.1_g000001 Rmu_sc0002822.1_g000027 Rmu_sc0004110.1_g000007 Rmu_sc0004110.1_g000008 Rmu_sc0015029.1_g000002 Rmu_sc0025325.1_g000009
rosa_roxburghii	Rroxscaffold_3G00230300 Rroxscaffold_3G00274620
rosa_rugosa	Rorug06G0419400 Rorug06G0419500 Rorug06G0419600
rosa_samantha	Rh7AG018900 Rh7AG408900 Rh7AG409000 Rh7BG018200 Rh7BG388800 Rh7CG019000 Rh7DG018800 Rh7DG406800
rosa_wichuraiana	Rw0G022580 Rw0G022590 Rw7G001530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2603
Acc36I	ACCTGC	1 cut(s)	1571
AccB7I	CCANNNNNTGG	2 cut(s)	555, 1967
AccI	GTMKAC	3 cut(s)	195, 2716, 2840
AccII	CGCG	1 cut(s)	108
AccIII	TCCGGA	1 cut(s)	1873
AciI	CCGC	6 cut(s)	253, 326, 393, 1930, 2246, 2973
AclI	AACGTT	1 cut(s)	385
AclWI	GGATC	8 cut(s)	431, 800, 813, 1125, 1238, 1251, 2804, 2885
AcsI	RAATTY	5 cut(s)	901, 938, 1098, 2304, 2778
AcuI	CTGAAG	4 cut(s)	323, 746, 1770, 2519
AfaI	GTAC	7 cut(s)	316, 477, 1528, 2262, 2331, 2436, 2577
AfiI	CCNNNNNNNGG	8 cut(s)	205, 555, 802, 1159, 1684, 1967, 2765, 2900
AflIII	ACRYGT	2 cut(s)	907, 2336
AjiI	CACGTC	3 cut(s)	2599, 2878, 3023
AjuI	GAANNNNNNNTTGG	4 cut(s)	586, 618, 832, 864
Alw26I	GTCTC	7 cut(s)	9, 744, 1058, 1071, 2132, 2232, 2795
AlwI	GGATC	8 cut(s)	431, 800, 813, 1125, 1238, 1251, 2804, 2885
AlwNI	CAGNNNCTG	1 cut(s)	367
Ama87I	CYCGRG	1 cut(s)	242
Aor13HI	TCCGGA	1 cut(s)	1873
AoxI	GGCC	6 cut(s)	96, 889, 1675, 1969, 2353, 2746
ApeKI	GCWGC	6 cut(s)	174, 247, 367, 730, 1775, 1814
ApoI	RAATTY	5 cut(s)	901, 938, 1098, 2304, 2778
ArsI	GACNNNNNNTTYG	4 cut(s)	212, 244, 2862, 2894
AseI	ATTAAT	1 cut(s)	645
Asp700I	GAANNNNTTC	3 cut(s)	386, 501, 2086
AspA2I	CCTAGG	1 cut(s)	2024
AspLEI	GCGC	3 cut(s)	110, 790, 2604
AspS9I	GGNCC	8 cut(s)	97, 238, 657, 890, 1262, 1431, 1970, 2354
AsuHPI	GGTGA	6 cut(s)	112, 136, 508, 1490, 1751, 1820
AsuII	TTCGAA	1 cut(s)	676
AvaI	CYCGRG	1 cut(s)	242
AvaII	GGWCC	4 cut(s)	238, 657, 1262, 1431
AvrII	CCTAGG	1 cut(s)	2024
AxyI	CCTNAGG	1 cut(s)	1158
BaeGI	GKGCMC	1 cut(s)	1887
BamHI	GGATCC	2 cut(s)	805, 1243
BauI	CACGAG	1 cut(s)	810
BbsI	GAAGAC	3 cut(s)	63, 1608, 2036
BbvI	GCAGC	6 cut(s)	186, 234, 354, 742, 1787, 1801
BccI	CCATC	6 cut(s)	1067, 1539, 1851, 2141, 2336, 2345
BceAI	ACGGC	2 cut(s)	91, 359
BclI	TGATCA	1 cut(s)	2794
BcoDI	GTCTC	7 cut(s)	9, 744, 1058, 1071, 2132, 2232, 2795
BfaI	CTAG	2 cut(s)	171, 2025
BfmI	CTRYAG	4 cut(s)	919, 1464, 1497, 2472
BfoI	RGCGCY	1 cut(s)	791
BfuAI	ACCTGC	1 cut(s)	1571
BglII	AGATCT	2 cut(s)	988, 2905
BisI	GCNGC	9 cut(s)	175, 248, 368, 393, 731, 1776, 1815, 2247, 2974
BlnI	CCTAGG	1 cut(s)	2024
BlsI	GCNGC	9 cut(s)	176, 249, 369, 394, 732, 1777, 1816, 2248, 2975
Bme18I	GGWCC	4 cut(s)	238, 657, 1262, 1431
BmeT110I	CYCGRG	1 cut(s)	242
BmgBI	CACGTC	3 cut(s)	2599, 2878, 3023
BmgT120I	GGNCC	8 cut(s)	97, 238, 657, 890, 1262, 1431, 1970, 2354
BmiI	GGNNCC	5 cut(s)	210, 611, 807, 1245, 1400
BmrI	ACTGGG	2 cut(s)	1177, 1246
BmsI	GCATC	8 cut(s)	478, 628, 938, 1435, 2146, 2482, 2887, 3039
BmuI	ACTGGG	2 cut(s)	1177, 1246
BpiI	GAAGAC	3 cut(s)	63, 1608, 2036
BplI	GAGNNNNNCTC	2 cut(s)	2842, 2874
BpmI	CTGGAG	2 cut(s)	1578, 1870
Bpu14I	TTCGAA	1 cut(s)	676
BpuEI	CTTGAG	2 cut(s)	272, 1747
BsaAI	YACGTR	1 cut(s)	1913
BsaWI	WCCGGW	2 cut(s)	1830, 1873
Bsc4I	CCNNNNNNNGG	8 cut(s)	205, 555, 802, 1159, 1684, 1967, 2765, 2900
Bse118I	RCCGGY	1 cut(s)	122
Bse1I	ACTGG	5 cut(s)	630, 817, 1172, 1241, 1528
Bse21I	CCTNAGG	1 cut(s)	1158
Bse3DI	GCAATG	3 cut(s)	475, 763, 1795
BseAI	TCCGGA	1 cut(s)	1873
BseGI	GGATG	9 cut(s)	643, 1444, 1450, 1561, 1882, 1926, 2353, 2458, 2599
BseLI	CCNNNNNNNGG	8 cut(s)	205, 555, 802, 1159, 1684, 1967, 2765, 2900
BseMI	GCAATG	3 cut(s)	475, 763, 1795
BseMII	CTCAG	9 cut(s)	425, 888, 1053, 1676, 1697, 1906, 2094, 2121, 2316
BseNI	ACTGG	5 cut(s)	630, 817, 1172, 1241, 1528
BseRI	GAGGAG	7 cut(s)	193, 359, 362, 725, 1867, 2936, 3051
BseSI	GKGCMC	1 cut(s)	1887
BseXI	GCAGC	6 cut(s)	186, 234, 354, 742, 1787, 1801
BsgI	GTGCAG	3 cut(s)	444, 606, 2985
Bsh1236I	CGCG	1 cut(s)	108
BshFI	GGCC	6 cut(s)	98, 891, 1677, 1971, 2355, 2748
BsiHKCI	CYCGRG	1 cut(s)	242
BsiSI	CCGG	3 cut(s)	123, 1831, 1874
BslFI	GGGAC	4 cut(s)	546, 778, 1369, 2131
BslI	CCNNNNNNNGG	8 cut(s)	205, 555, 802, 1159, 1684, 1967, 2765, 2900
BsmAI	GTCTC	7 cut(s)	9, 744, 1058, 1071, 2132, 2232, 2795
BsmFI	GGGAC	4 cut(s)	546, 778, 1369, 2131
BsnI	GGCC	6 cut(s)	98, 891, 1677, 1971, 2355, 2748
BsoBI	CYCGRG	1 cut(s)	242
Bsp119I	TTCGAA	1 cut(s)	676
Bsp1286I	GDGCHC	1 cut(s)	1887
Bsp13I	TCCGGA	1 cut(s)	1873
Bsp19I	CCATGG	1 cut(s)	2826
BspACI	CCGC	6 cut(s)	253, 326, 393, 1930, 2246, 2973
BspANI	GGCC	6 cut(s)	98, 891, 1677, 1971, 2355, 2748
BspCNI	CTCAG	9 cut(s)	424, 887, 1054, 1675, 1696, 1905, 2095, 2122, 2317
BspEI	TCCGGA	1 cut(s)	1873
BspFNI	CGCG	1 cut(s)	108
BspHI	TCATGA	3 cut(s)	493, 859, 2797
BspLI	GGNNCC	5 cut(s)	210, 611, 807, 1245, 1400
BspMI	ACCTGC	1 cut(s)	1571
BspPI	GGATC	8 cut(s)	431, 800, 813, 1125, 1238, 1251, 2804, 2885
BspT104I	TTCGAA	1 cut(s)	676
BsrDI	GCAATG	3 cut(s)	475, 763, 1795
BsrFI	RCCGGY	1 cut(s)	122
BsrI	ACTGG	5 cut(s)	630, 817, 1172, 1241, 1528
BssAI	RCCGGY	1 cut(s)	122
BssNAI	GTATAC	1 cut(s)	2841
BssSI	CACGAG	1 cut(s)	810
BssT1I	CCWWGG	5 cut(s)	839, 1434, 1966, 2024, 2826
Bst1107I	GTATAC	1 cut(s)	2841
Bst2BI	CACGAG	1 cut(s)	810
Bst4CI	ACNGT	4 cut(s)	1266, 2243, 2300, 2668
Bst6I	CTCTTC	5 cut(s)	522, 1749, 1893, 2690, 2843
BstAPI	GCANNNNNTGC	1 cut(s)	1454
BstBAI	YACGTR	1 cut(s)	1913
BstBI	TTCGAA	1 cut(s)	676
BstC8I	GCNNGC	3 cut(s)	372, 1387, 2856
BstDSI	CCRYGG	2 cut(s)	1265, 2826
BstEII	GGTNACC	1 cut(s)	514
BstENI	CCTNNNNNAGG	1 cut(s)	1157
BstF5I	GGATG	9 cut(s)	643, 1444, 1450, 1561, 1882, 1926, 2353, 2458, 2599
BstFNI	CGCG	1 cut(s)	108
BstH2I	RGCGCY	1 cut(s)	791
BstHHI	GCGC	3 cut(s)	110, 790, 2604
BstMAI	GTCTC	7 cut(s)	9, 744, 1058, 1071, 2132, 2232, 2795
BstMWI	GCNNNNNNNGC	5 cut(s)	298, 875, 1386, 1454, 1469
BstNSI	RCATGY	4 cut(s)	911, 1821, 2340, 2858
BstPI	GGTNACC	1 cut(s)	514
BstSFI	CTRYAG	4 cut(s)	919, 1464, 1497, 2472
BstSLI	GKGCMC	1 cut(s)	1887
BstSNI	TACGTA	1 cut(s)	1913
BstUI	CGCG	1 cut(s)	108
BstV1I	GCAGC	6 cut(s)	186, 234, 354, 742, 1787, 1801
BstV2I	GAAGAC	3 cut(s)	63, 1608, 2036
BstX2I	RGATCY	5 cut(s)	805, 988, 1117, 1243, 2905
BstYI	RGATCY	5 cut(s)	805, 988, 1117, 1243, 2905
BstZ17I	GTATAC	1 cut(s)	2841
Bsu36I	CCTNAGG	1 cut(s)	1158
BsuRI	GGCC	6 cut(s)	98, 891, 1677, 1971, 2355, 2748
BtgI	CCRYGG	2 cut(s)	1265, 2826
BtgZI	GCGATG	2 cut(s)	2633, 2991
BtrI	CACGTC	3 cut(s)	2599, 2878, 3023
BtsCI	GGATG	9 cut(s)	643, 1444, 1450, 1561, 1882, 1926, 2353, 2458, 2599
BtsI	GCAGTG	1 cut(s)	1356
BtsIMutI	CAGTG	5 cut(s)	623, 1356, 1382, 2403, 2544
BveI	ACCTGC	1 cut(s)	1571
Cac8I	GCNNGC	3 cut(s)	372, 1387, 2856
CaiI	CAGNNNCTG	1 cut(s)	367
CciI	TCATGA	3 cut(s)	493, 859, 2797
CfoI	GCGC	3 cut(s)	110, 790, 2604
Cfr10I	RCCGGY	1 cut(s)	122
Cfr13I	GGNCC	8 cut(s)	97, 238, 657, 890, 1262, 1431, 1970, 2354
CseI	GACGC	3 cut(s)	373, 2192, 2465
Csp6I	GTAC	7 cut(s)	315, 476, 1527, 2261, 2330, 2435, 2576
CspCI	CAANNNNNGTGG	2 cut(s)	532, 567
CviQI	GTAC	7 cut(s)	315, 476, 1527, 2261, 2330, 2435, 2576
Eam1104I	CTCTTC	5 cut(s)	522, 1749, 1893, 2690, 2843
EarI	CTCTTC	5 cut(s)	522, 1749, 1893, 2690, 2843
EciI	GGCGGA	1 cut(s)	315
Eco105I	TACGTA	1 cut(s)	1913
Eco130I	CCWWGG	5 cut(s)	839, 1434, 1966, 2024, 2826
Eco47I	GGWCC	4 cut(s)	238, 657, 1262, 1431
Eco57I	CTGAAG	4 cut(s)	323, 746, 1770, 2519
Eco81I	CCTNAGG	1 cut(s)	1158
Eco88I	CYCGRG	1 cut(s)	242
Eco91I	GGTNACC	1 cut(s)	514
EcoNI	CCTNNNNNAGG	1 cut(s)	1157
EcoO109I	RGGNCCY	3 cut(s)	97, 238, 657
EcoO65I	GGTNACC	1 cut(s)	514
EcoT14I	CCWWGG	5 cut(s)	839, 1434, 1966, 2024, 2826
ErhI	CCWWGG	5 cut(s)	839, 1434, 1966, 2024, 2826
FaqI	GGGAC	4 cut(s)	546, 778, 1369, 2131
FbaI	TGATCA	1 cut(s)	2794
FblI	GTMKAC	3 cut(s)	195, 2716, 2840
Fnu4HI	GCNGC	9 cut(s)	175, 248, 368, 393, 731, 1776, 1815, 2247, 2974
FokI	GGATG	9 cut(s)	650, 1451, 1457, 1548, 1889, 1913, 2360, 2465, 2606
Fsp4HI	GCNGC	9 cut(s)	175, 248, 368, 393, 731, 1776, 1815, 2247, 2974
FspBI	CTAG	2 cut(s)	171, 2025
FspI	TGCGCA	1 cut(s)	2603
GlaI	GCGC	3 cut(s)	109, 789, 2603
GluI	GCNGC	9 cut(s)	175, 248, 368, 393, 731, 1776, 1815, 2247, 2974
GsuI	CTGGAG	2 cut(s)	1578, 1870
HaeII	RGCGCY	1 cut(s)	791
HaeIII	GGCC	6 cut(s)	98, 891, 1677, 1971, 2355, 2748
HapII	CCGG	3 cut(s)	123, 1831, 1874
HgaI	GACGC	3 cut(s)	373, 2192, 2465
HhaI	GCGC	3 cut(s)	110, 790, 2604
Hin6I	GCGC	3 cut(s)	108, 788, 2602
HinP1I	GCGC	3 cut(s)	108, 788, 2602
HincII	GTYRAC	3 cut(s)	1165, 1711, 2717
HindII	GTYRAC	3 cut(s)	1165, 1711, 2717
HindIII	AAGCTT	4 cut(s)	683, 1470, 2702, 2741
HpaI	GTTAAC	1 cut(s)	1165
HpaII	CCGG	3 cut(s)	123, 1831, 1874
HphI	GGTGA	6 cut(s)	112, 136, 508, 1490, 1751, 1820
Hpy166II	GTNNAC	8 cut(s)	196, 1165, 1269, 1431, 1590, 1711, 2717, 2841
Hpy8I	GTNNAC	8 cut(s)	196, 1165, 1269, 1431, 1590, 1711, 2717, 2841
HpyAV	CCTTC	9 cut(s)	339, 450, 549, 796, 1734, 1855, 2205, 2385, 2938
HpyCH4III	ACNGT	4 cut(s)	1266, 2243, 2300, 2668
HpyCH4IV	ACGT	7 cut(s)	192, 385, 1912, 1957, 2598, 2877, 3022
HpyF10VI	GCNNNNNNNGC	5 cut(s)	298, 875, 1386, 1454, 1469
HpySE526I	ACGT	7 cut(s)	192, 385, 1912, 1957, 2598, 2877, 3022
HspAI	GCGC	3 cut(s)	108, 788, 2602
Kpn2I	TCCGGA	1 cut(s)	1873
Ksp22I	TGATCA	1 cut(s)	2794
KspAI	GTTAAC	1 cut(s)	1165
LmnI	GCTCC	4 cut(s)	214, 255, 1171, 1398
Lsp1109I	GCAGC	6 cut(s)	186, 234, 354, 742, 1787, 1801
LweI	GCATC	8 cut(s)	478, 628, 938, 1435, 2146, 2482, 2887, 3039
MaeI	CTAG	2 cut(s)	171, 2025
MaeII	ACGT	7 cut(s)	192, 385, 1912, 1957, 2598, 2877, 3022
MaeIII	GTNAC	5 cut(s)	514, 1996, 2384, 2525, 2926
MfeI	CAATTG	1 cut(s)	1779
MflI	RGATCY	5 cut(s)	805, 988, 1117, 1243, 2905
MhlI	GDGCHC	1 cut(s)	1887
MlyI	GAGTC	5 cut(s)	215, 1073, 1360, 1585, 1754
MmeI	TCCRAC	5 cut(s)	243, 300, 363, 1589, 1628
MroI	TCCGGA	1 cut(s)	1873
MroXI	GAANNNNTTC	3 cut(s)	386, 501, 2086
MslI	CAYNNNNRTG	2 cut(s)	1375, 2618
MspA1I	CMGCKG	1 cut(s)	2973
MspI	CCGG	3 cut(s)	123, 1831, 1874
MunI	CAATTG	1 cut(s)	1779
MvnI	CGCG	1 cut(s)	108
MwoI	GCNNNNNNNGC	5 cut(s)	298, 875, 1386, 1454, 1469
NcoI	CCATGG	1 cut(s)	2826
NlaIV	GGNNCC	5 cut(s)	210, 611, 807, 1245, 1400
NmeAIII	GCCGAG	2 cut(s)	40, 185
NmuCI	GTSAC	3 cut(s)	514, 2525, 2926
NsbI	TGCGCA	1 cut(s)	2603
NspI	RCATGY	4 cut(s)	911, 1821, 2340, 2858
NspV	TTCGAA	1 cut(s)	676
PaeI	GCATGC	1 cut(s)	2858
PaeR7I	CTCGAG	1 cut(s)	242
PagI	TCATGA	3 cut(s)	493, 859, 2797
PciI	ACATGT	2 cut(s)	907, 2336
PcsI	WCGNNNNNNNCGW	8 cut(s)	18, 48, 57, 60, 69, 90, 240, 396
PdmI	GAANNNNTTC	3 cut(s)	386, 501, 2086
PfeI	GAWTC	7 cut(s)	569, 848, 1049, 1291, 2087, 2321, 3026
PflMI	CCANNNNNTGG	2 cut(s)	555, 1967
PfoI	TCCNGGA	1 cut(s)	2785
PkrI	GCNGC	9 cut(s)	176, 249, 369, 394, 732, 1777, 1816, 2248, 2975
PleI	GAGTC	5 cut(s)	215, 1073, 1360, 1585, 1754
PpsI	GAGTC	5 cut(s)	215, 1073, 1360, 1585, 1754
Ppu21I	YACGTR	1 cut(s)	1913
PpuMI	RGGWCCY	2 cut(s)	238, 657
PscI	ACATGT	2 cut(s)	907, 2336
PshBI	ATTAAT	1 cut(s)	645
Psp1406I	AACGTT	1 cut(s)	385
Psp5II	RGGWCCY	2 cut(s)	238, 657
PspEI	GGTNACC	1 cut(s)	514
PspN4I	GGNNCC	5 cut(s)	210, 611, 807, 1245, 1400
PspPI	GGNCC	8 cut(s)	97, 238, 657, 890, 1262, 1431, 1970, 2354
PspPPI	RGGWCCY	2 cut(s)	238, 657
PspXI	VCTCGAGB	1 cut(s)	242
PstNI	CAGNNNCTG	1 cut(s)	367
PsuI	RGATCY	5 cut(s)	805, 988, 1117, 1243, 2905
RsaI	GTAC	7 cut(s)	316, 477, 1528, 2262, 2331, 2436, 2577
RsaNI	GTAC	7 cut(s)	315, 476, 1527, 2261, 2330, 2435, 2576
RseI	CAYNNNNRTG	2 cut(s)	1375, 2618
SalI	GTCGAC	1 cut(s)	2715
SatI	GCNGC	9 cut(s)	175, 248, 368, 393, 731, 1776, 1815, 2247, 2974
Sau96I	GGNCC	8 cut(s)	97, 238, 657, 890, 1262, 1431, 1970, 2354
SchI	GAGTC	5 cut(s)	215, 1073, 1360, 1585, 1754
SduI	GDGCHC	1 cut(s)	1887
SfaNI	GCATC	8 cut(s)	478, 628, 938, 1435, 2146, 2482, 2887, 3039
SfcI	CTRYAG	4 cut(s)	919, 1464, 1497, 2472
Sfr274I	CTCGAG	1 cut(s)	242
SfuI	TTCGAA	1 cut(s)	676
SinI	GGWCC	4 cut(s)	238, 657, 1262, 1431
SlaI	CTCGAG	1 cut(s)	242
SmiMI	CAYNNNNRTG	2 cut(s)	1375, 2618
SmlI	CTYRAG	3 cut(s)	242, 287, 1762
SmoI	CTYRAG	3 cut(s)	242, 287, 1762
SnaBI	TACGTA	1 cut(s)	1913
SphI	GCATGC	1 cut(s)	2858
SsiI	CCGC	6 cut(s)	253, 326, 393, 1930, 2246, 2973
SspI	AATATT	1 cut(s)	1339
SspMI	CTAG	2 cut(s)	171, 2025
StyI	CCWWGG	5 cut(s)	839, 1434, 1966, 2024, 2826
TaaI	ACNGT	4 cut(s)	1266, 2243, 2300, 2668
TaiI	ACGT	7 cut(s)	195, 388, 1915, 1960, 2601, 2880, 3025
TaqI	TCGA	8 cut(s)	93, 231, 243, 676, 958, 1082, 1122, 2716
TatI	WGTACW	1 cut(s)	314
TauI	GCSGC	3 cut(s)	395, 2249, 2976
TfiI	GAWTC	7 cut(s)	569, 848, 1049, 1291, 2087, 2321, 3026
TscAI	CASTG	5 cut(s)	630, 1356, 1382, 2410, 2551
TseFI	GTSAC	3 cut(s)	514, 2525, 2926
TseI	GCWGC	6 cut(s)	174, 247, 367, 730, 1775, 1814
Tsp45I	GTSAC	3 cut(s)	514, 2525, 2926
TspDTI	ATGAA	9 cut(s)	486, 510, 540, 939, 1550, 1893, 2021, 2241, 2670
TspGWI	ACGGA	4 cut(s)	92, 1030, 1530, 2347
TspRI	CASTG	5 cut(s)	630, 1356, 1382, 2410, 2551
Van91I	CCANNNNNTGG	2 cut(s)	555, 1967
VpaK11BI	GGWCC	4 cut(s)	238, 657, 1262, 1431
VspI	ATTAAT	1 cut(s)	645
XagI	CCTNNNNNAGG	1 cut(s)	1157
XapI	RAATTY	5 cut(s)	901, 938, 1098, 2304, 2778
XceI	RCATGY	4 cut(s)	911, 1821, 2340, 2858
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1313
XhoI	CTCGAG	1 cut(s)	242
XmaJI	CCTAGG	1 cut(s)	2024
XmiI	GTMKAC	3 cut(s)	195, 2716, 2840
XmnI	GAANNNNTTC	3 cut(s)	386, 501, 2086
XspI	CTAG	2 cut(s)	171, 2025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.