Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0004093

Physical Location & Seq

Genomic Coordinates Forward (+)

23387950 .. 23390994

Gene Structure 3045 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g32410.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGATCGCTTCCGGGTTCAGCCCACGTGGTCATATTCTCAACCGTTTGATTGACGTCTACTGCAAATCCAACAATCTTAGATATGCACTCCACCTGTTCGACGAAATTCCCAACCCGGACATCGTCGCCAGAACCACTCTGGTTTCGGCTTATTCGGGCGTCGGGGATGTCACTCTGGCCCGGAGAGTGTTTAGGGAGACTCCGGTGAGCATGCGAGACACTGTTAGCTACAATGCCATGATCACGGGGTATTCGCAGAACAGGGACGGCAATGCTGCTGTTGAGCTGTTTAGGGAGATGAGGCGAGGCGGATTTCGGCCTGATCATTTTACGTTTACCAGTGTGCTGAGTGGACTTGCGCTTATTGTGGAGGATGAGAGGCAGTGTGGGCAGCTGCATTGTGCGATTGTTAAGTCTGGAGTGTTGTTGGCCACTTCGGTGTCGAATGCGTTGGTGTCTGTTTATGTTAAGTGTGCTTCTTCGCTGGTGGTGGTTGCTGCGGCGAGGAAGGTGTTTGACGAAATGGATAAGAGAGATGAGCTGTCATGGACGACCATGATTACTGGCTATGTGAGGAATGAGGACCTTGATGGTGCTAGGCAGTTGCTTGATGGGATGGATGACAAATTGGAAGTGGCGTGGAATGCGATGATTTCGGGTTATGTGCATCACGGTTTTTGTCACGAAGCGTTGCAATTGTTTAGGGAAATGCATTTGATGGGGATTCGCCAGGATGAGTATACTTACACTAGTGTAATCAGTGCTTGTGCTAACAATGGCTTATTTAAGCATGGGAAGCAGCTGCATGCTTATATTCTAAGATCTGAAGCAAAGCCGACTGTGGACTTCTCTTTATCTGTGAACAACGCATTGGTCACTCTATACTTTAGGTGTGGGAAAATTGATGAAGCAAGACATATTTTTAATAATATGTCCGTCAGAGATCTTGTTTCATGGAATGCGATATTGTCAGGGTATGTGAATGCAGGCCGCATCCAGGAAGCAAAATCTTTCTTTGAGGAAATGCCAGAAAGGAGTGGTCTATCGTGGACTGTAATAATATCTGGTTTAGCTCAAAATGGATATGGGGAAGATGCTATGAAGCTATTTAACCAAATGAGATTAGATGGATTTAAACCCTGTGATTATGCATTTGCTGGAGCTATTTCGTCGTGTGCTGCTCTGGGGGCATTGGAGAATGGACGCCAGCTCCATGCTCAAGTAATATGCTTGGGACATGATCCAAGCCTTTCAGTTGGAAATTCACTTATCACAATGTATGCGAGATGTGGTGTTGTGGATGGTGCTGACTGTGTGTTCCTTACAATGCCTTCTGTTGATTCCGTGTCATGGAATGCTATGATCGCAGCTCTGGCACAACATGGATATGGTGTCCAAGCAATAAGTCTGTTTGAAAAAATGTTGGAGGAAGATATACTGCCAGATAGAATAACTTTCCTCACTATTCTCTCTGCTTGTAGTCATGCTGGTTTAGTTAAAGAAGGGCGCCATTATTTTCGTTCAATGCATGACTTTTACGGTATTTCCCCTGGTGAAGATCATTATGCTCGTATGATTGATTTGTTGTGCAGATCTGGGGAGTTGACAGAGGCCAAGGACTTAATCAAATCAATGCCATTTGAACCAGGTGCACCGATATGGGAGGCTATACTAGCTGGTTGCCGGACGCATGGGAATATGGATTTAGGTATTCAAGCTGCAGAACGACTCTTTGAGCTGGTGCCCAAGCATGATGGAACATATGTACTTTTGTCAAACTTGTATGCTGCTTTAGGCCGTTGGGACGATGTGGCTAAGGTGCGAAATCTAATGAGGGAGCGGGGGGTTAAGAAAGAACCTGGTTGTAGTTGGATTGACGTTGATAATATGGTCCATGTCTTCTTGGTTGGTGATACTCGGCACCCTGAGGTGAATGAGGTGTACAAGTATCTAGAGCAATTGGTCCTCAAAATGAGGAAATTAGGATATGTTCCTGACTCAAAGTTTGCGTTGCATGATATGGAATCTGAGCATAAAGAGAATTCCTTGTCTACTCACAGTGAGAAGCTTGCCGTTGCATTTGGGATCATGAAGCTTCCTCTTGGAGCCACAATAAGAGTTTTTAAGAATCTTAGGATTTGTGGGGATTGCCATAATGCCTTCAAGTATATGTCAAGAGTGGTTGGGAGAGAAATAGTTGTGAGAGATGCCAAAAGGTTTCATCATTTTAGGAATGGCGAATGCTCCTGTGGAAATTACTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

755

Amino Acids

84.32

Weight (kDa)

6.48

Isoelectric Point (pI)

34.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	72 - 120	1.4e-15	PPR repeat family
PPR	PF01535	75 - 105	4.6e-08	PPR repeat
PPR_2	PF13041	212 - 258	1.6e-12	PPR repeat family
PPR	PF01535	212 - 242	6.7e-09	PPR repeat
PPR_2	PF13041	315 - 345	9.2e-07	PPR repeat family
PPR	PF01535	317 - 345	5.4e-07	PPR repeat
PPR_2	PF13041	349 - 392	1.1e-06	PPR repeat family
PPR	PF01535	349 - 378	6.7e-07	PPR repeat
PPR_2	PF13041	447 - 494	2e-10	PPR repeat family
PPR	PF01535	449 - 479	1.2e-06	PPR repeat
E_motif	PF20431	564 - 626	7.3e-23	E motif
DYW_deaminase	PF14432	662 - 754	1.9e-42	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25360
fragaria_vesca	FvH4_5g32410 FvH4_6g08990
malus_domestica	MD17G1265000.v1.1
prunus_persica	Prupe.3G114900_v2.0.a1 Prupe.3G115100_v2.0.a1
pyrus_communis	pycom17g26470
rosa_chinensis	RchiOBHm_Chr7g0221631 RchiOBHm_Chr7g0228891 RchiOBHm_Chr7g0228961
rosa_laevigata	RLG00000001538 RLG00000002149
rosa_multiflora	Rmu_sc0005016.1_g000036 Rmu_sc0005913.1_g000007 Rmu_sc0005913.1_g000028 Rmu_sc0027650.1_g000001
rosa_roxburghii	Rroxscaffold_3G00230820 Rroxscaffold_3G00238170
rosa_rugosa	Rorug07G0202700 Rorug07G0202700 Rorug07G0252700 Rorug07G0254200
rosa_samantha	Rh7AG343100 Rh7AG405900 Rh7BG333100 Rh7BG385400 Rh7CG360700 Rh7CG423700 Rh7DG341100
rosa_wichuraiana	Rw0G004030 Rw7G029100 Rw7G033660 Rw7G033680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	57
AccB1I	GGYRCC	3 cut(s)	1506, 1741, 1920
AccBSI	CCGCTC	1 cut(s)	1840
AccI	GTMKAC	3 cut(s)	57, 740, 2051
AciI	CCGC	4 cut(s)	309, 500, 991, 1840
AclWI	GGATC	2 cut(s)	1235, 2093
AcoI	YGGCCR	1 cut(s)	429
AcsI	RAATTY	3 cut(s)	105, 1261, 2041
AcuI	CTGAAG	1 cut(s)	846
AcvI	CACGTG	1 cut(s)	26
AcyI	GRCGYC	4 cut(s)	54, 159, 1204, 1507
AfaI	GTAC	2 cut(s)	1767, 1943
AfiI	CCNNNNNNNGG	2 cut(s)	997, 1350
AgsI	TTSAA	5 cut(s)	1415, 1524, 1643, 1715, 2164
AhlI	ACTAGT	1 cut(s)	749
AjnI	CCWGG	5 cut(s)	729, 996, 1549, 1645, 1858
AjuI	GAANNNNNNNTTGG	2 cut(s)	854, 886
AleI	CACNNNNGTG	1 cut(s)	437
Alw21I	GWGCWC	1 cut(s)	1654
Alw26I	GTCTC	2 cut(s)	191, 210
Alw44I	GTGCAC	1 cut(s)	1650
AlwI	GGATC	2 cut(s)	1235, 2093
AoxI	GGCC	6 cut(s)	177, 317, 429, 988, 1611, 1795
ApaLI	GTGCAC	1 cut(s)	1650
ApoI	RAATTY	3 cut(s)	105, 1261, 2041
ArsI	GACNNNNNNTTYG	2 cut(s)	1988, 2020
AspLEI	GCGC	2 cut(s)	361, 1509
AspS9I	GGNCC	4 cut(s)	178, 583, 1891, 1963
AsuC2I	CCSGG	3 cut(s)	13, 116, 181
AsuHPI	GGTGA	4 cut(s)	217, 1565, 1922, 1942
AvaII	GGWCC	3 cut(s)	583, 1891, 1963
AxyI	CCTNAGG	1 cut(s)	1926
BaeGI	GKGCMC	2 cut(s)	1654, 1746
BalI	TGGCCA	1 cut(s)	431
BanI	GGYRCC	3 cut(s)	1506, 1741, 1920
BbrPI	CACGTG	1 cut(s)	26
BbsI	GAAGAC	1 cut(s)	1891
Bbv12I	GWGCWC	1 cut(s)	1654
BccI	CCATC	7 cut(s)	584, 605, 610, 712, 1121, 1295, 1748
BceAI	ACGGC	3 cut(s)	283, 1782, 2057
BciT130I	CCWGG	5 cut(s)	731, 998, 1551, 1647, 1860
BclI	TGATCA	2 cut(s)	240, 322
BcnI	CCSGG	3 cut(s)	13, 116, 181
BcoDI	GTCTC	2 cut(s)	191, 210
BcuI	ACTAGT	1 cut(s)	749
BfaI	CTAG	4 cut(s)	597, 750, 1673, 1952
BfmI	CTRYAG	1 cut(s)	1719
BfoI	RGCGCY	1 cut(s)	1510
BglII	AGATCT	3 cut(s)	821, 943, 1592
Bme1390I	CCNGG	8 cut(s)	13, 116, 181, 731, 998, 1551, 1647, 1860
Bme18I	GGWCC	3 cut(s)	583, 1891, 1963
BmgT120I	GGNCC	4 cut(s)	178, 583, 1891, 1963
BmiI	GGNNCC	4 cut(s)	1508, 1743, 1922, 2107
BmrFI	CCNGG	8 cut(s)	13, 116, 181, 731, 998, 1551, 1647, 1860
BmsI	GCATC	4 cut(s)	676, 1002, 1084, 2197
BpiI	GAAGAC	1 cut(s)	1891
BpmI	CTGGAG	2 cut(s)	438, 1179
Bpu10I	CCTNAGC	1 cut(s)	1815
BpuEI	CTTGAG	1 cut(s)	1203
BpuMI	CCSGG	3 cut(s)	13, 116, 181
BsaAI	YACGTR	1 cut(s)	26
BsaHI	GRCGYC	4 cut(s)	54, 159, 1204, 1507
BsaJI	CCNNGG	2 cut(s)	1549, 1614
BsaWI	WCCGGW	1 cut(s)	202
BsaXI	ACNNNNNCTCC	2 cut(s)	1194, 1224
Bsc4I	CCNNNNNNNGG	2 cut(s)	997, 1350
Bse1I	ACTGG	3 cut(s)	339, 568, 2264
Bse21I	CCTNAGG	1 cut(s)	1926
Bse3DI	GCAATG	1 cut(s)	277
BseBI	CCWGG	5 cut(s)	731, 998, 1551, 1647, 1860
BseDI	CCNNGG	2 cut(s)	1549, 1614
BseGI	GGATG	7 cut(s)	172, 379, 621, 625, 739, 993, 1306
BseLI	CCNNNNNNNGG	2 cut(s)	997, 1350
BseMI	GCAATG	1 cut(s)	277
BseMII	CTCAG	3 cut(s)	338, 1917, 2019
BseNI	ACTGG	3 cut(s)	339, 568, 2264
BseSI	GKGCMC	2 cut(s)	1654, 1746
BsgI	GTGCAG	1 cut(s)	1609
BshFI	GGCC	6 cut(s)	179, 319, 431, 990, 1613, 1797
BshNI	GGYRCC	3 cut(s)	1506, 1741, 1920
BsiHKAI	GWGCWC	1 cut(s)	1654
BsiSI	CCGG	5 cut(s)	12, 116, 181, 203, 1684
BslFI	GGGAC	3 cut(s)	278, 1248, 1817
BslI	CCNNNNNNNGG	2 cut(s)	997, 1350
BsmAI	GTCTC	2 cut(s)	191, 210
BsmFI	GGGAC	3 cut(s)	278, 1248, 1817
BsmI	GAATGC	6 cut(s)	451, 649, 964, 988, 1360, 2246
BsnI	GGCC	6 cut(s)	179, 319, 431, 990, 1613, 1797
Bsp1286I	GDGCHC	2 cut(s)	1654, 1746
Bsp1407I	TGTACA	1 cut(s)	1941
BspACI	CCGC	4 cut(s)	309, 500, 991, 1840
BspANI	GGCC	6 cut(s)	179, 319, 431, 990, 1613, 1797
BspCNI	CTCAG	3 cut(s)	339, 1918, 2020
BspHI	TCATGA	1 cut(s)	2088
BspLI	GGNNCC	4 cut(s)	1508, 1743, 1922, 2107
BspMAI	CTGCAG	1 cut(s)	1723
BspPI	GGATC	2 cut(s)	1235, 2093
BspT107I	GGYRCC	3 cut(s)	1506, 1741, 1920
BsrBI	CCGCTC	1 cut(s)	1840
BsrDI	GCAATG	1 cut(s)	277
BsrGI	TGTACA	1 cut(s)	1941
BsrI	ACTGG	3 cut(s)	339, 568, 2264
BssECI	CCNNGG	2 cut(s)	1549, 1614
BssNAI	GTATAC	1 cut(s)	741
BssNI	GRCGYC	4 cut(s)	54, 159, 1204, 1507
BssT1I	CCWWGG	1 cut(s)	1614
Bst1107I	GTATAC	1 cut(s)	741
Bst2UI	CCWGG	5 cut(s)	731, 998, 1551, 1647, 1860
Bst4CI	ACNGT	8 cut(s)	44, 223, 674, 841, 1054, 1313, 1541, 2060
BstACI	GRCGYC	4 cut(s)	54, 159, 1204, 1507
BstAUI	TGTACA	1 cut(s)	1941
BstBAI	YACGTR	1 cut(s)	26
BstC8I	GCNNGC	5 cut(s)	212, 807, 988, 1208, 2070
BstDEI	CTNAG	7 cut(s)	77, 347, 818, 1815, 1926, 2028, 2132
BstF5I	GGATG	7 cut(s)	172, 379, 621, 625, 739, 993, 1306
BstH2I	RGCGCY	1 cut(s)	1510
BstHHI	GCGC	2 cut(s)	361, 1509
BstMAI	GTCTC	2 cut(s)	191, 210
BstMWI	GCNNNNNNNGC	7 cut(s)	388, 644, 796, 1187, 1364, 1373, 1673
BstNI	CCWGG	5 cut(s)	731, 998, 1551, 1647, 1860
BstNSI	RCATGY	2 cut(s)	214, 809
BstSCI	CCNGG	8 cut(s)	11, 114, 179, 729, 996, 1549, 1645, 1858
BstSFI	CTRYAG	1 cut(s)	1719
BstSLI	GKGCMC	2 cut(s)	1654, 1746
BstV2I	GAAGAC	1 cut(s)	1891
BstX2I	RGATCY	3 cut(s)	821, 943, 1592
BstYI	RGATCY	3 cut(s)	821, 943, 1592
BstZ17I	GTATAC	1 cut(s)	741
Bsu36I	CCTNAGG	1 cut(s)	1926
BsuRI	GGCC	6 cut(s)	179, 319, 431, 990, 1613, 1797
BtgZI	GCGATG	1 cut(s)	662
BtsCI	GGATG	7 cut(s)	172, 379, 621, 625, 739, 993, 1306
BtsI	GCAGTG	1 cut(s)	389
BtsIMutI	CAGTG	5 cut(s)	219, 346, 389, 766, 2065
Cac8I	GCNNGC	5 cut(s)	212, 807, 988, 1208, 2070
CciI	TCATGA	1 cut(s)	2088
CfoI	GCGC	2 cut(s)	361, 1509
Cfr13I	GGNCC	4 cut(s)	178, 583, 1891, 1963
CseI	GACGC	3 cut(s)	148, 1212, 1696
CsiI	ACCWGGT	2 cut(s)	1645, 1858
Csp6I	GTAC	2 cut(s)	1766, 1942
CviQI	GTAC	2 cut(s)	1766, 1942
DdeI	CTNAG	7 cut(s)	77, 347, 818, 1815, 1926, 2028, 2132
DinI	GGCGCC	1 cut(s)	1508
DraI	TTTAAA	1 cut(s)	1135
EaeI	YGGCCR	1 cut(s)	429
EciI	GGCGGA	1 cut(s)	324
Eco130I	CCWWGG	1 cut(s)	1614
Eco47I	GGWCC	3 cut(s)	583, 1891, 1963
Eco57I	CTGAAG	1 cut(s)	846
Eco72I	CACGTG	1 cut(s)	26
Eco81I	CCTNAGG	1 cut(s)	1926
EcoO109I	RGGNCCY	1 cut(s)	583
EcoRI	GAATTC	1 cut(s)	2041
EcoRII	CCWGG	5 cut(s)	729, 996, 1549, 1645, 1858
EcoT14I	CCWWGG	1 cut(s)	1614
EcoT22I	ATGCAT	3 cut(s)	714, 1153, 1530
EgeI	GGCGCC	1 cut(s)	1508
EheI	GGCGCC	1 cut(s)	1508
ErhI	CCWWGG	1 cut(s)	1614
FaqI	GGGAC	3 cut(s)	278, 1248, 1817
FauI	CCCGC	1 cut(s)	1833
FauNDI	CATATG	1 cut(s)	1762
FbaI	TGATCA	2 cut(s)	240, 322
FblI	GTMKAC	3 cut(s)	57, 740, 2051
FokI	GGATG	7 cut(s)	179, 386, 628, 632, 746, 980, 1313
FspBI	CTAG	4 cut(s)	597, 750, 1673, 1952
GlaI	GCGC	2 cut(s)	360, 1508
GsuI	CTGGAG	2 cut(s)	438, 1179
HaeII	RGCGCY	1 cut(s)	1510
HaeIII	GGCC	6 cut(s)	179, 319, 431, 990, 1613, 1797
HapII	CCGG	5 cut(s)	12, 116, 181, 203, 1684
HgaI	GACGC	3 cut(s)	148, 1212, 1696
HhaI	GCGC	2 cut(s)	361, 1509
Hin1I	GRCGYC	4 cut(s)	54, 159, 1204, 1507
Hin6I	GCGC	2 cut(s)	359, 1507
HinP1I	GCGC	2 cut(s)	359, 1507
HincII	GTYRAC	1 cut(s)	1605
HindII	GTYRAC	1 cut(s)	1605
HindIII	AAGCTT	2 cut(s)	2066, 2093
HinfI	GANTC	7 cut(s)	199, 724, 1340, 1728, 1997, 2024, 2128
HpaII	CCGG	5 cut(s)	12, 116, 181, 203, 1684
HphI	GGTGA	4 cut(s)	217, 1565, 1922, 1942
Hpy188I	TCNGA	3 cut(s)	826, 941, 2029
Hpy188III	TCNNGA	6 cut(s)	417, 683, 1952, 1994, 2089, 2175
Hpy99I	CGWCG	4 cut(s)	104, 128, 164, 1174
HpyAV	CCTTC	4 cut(s)	502, 1341, 1496, 2170
HpyCH4III	ACNGT	8 cut(s)	44, 223, 674, 841, 1054, 1313, 1541, 2060
HpyCH4IV	ACGT	4 cut(s)	25, 54, 332, 1878
HpyF10VI	GCNNNNNNNGC	7 cut(s)	388, 644, 796, 1187, 1364, 1373, 1673
HpyF3I	CTNAG	7 cut(s)	77, 347, 818, 1815, 1926, 2028, 2132
HpySE526I	ACGT	4 cut(s)	25, 54, 332, 1878
Hsp92I	GRCGYC	4 cut(s)	54, 159, 1204, 1507
HspAI	GCGC	2 cut(s)	359, 1507
KasI	GGCGCC	1 cut(s)	1506
Ksp22I	TGATCA	2 cut(s)	240, 322
LmnI	GCTCC	5 cut(s)	1160, 1215, 1837, 2105, 2249
LweI	GCATC	4 cut(s)	676, 1002, 1084, 2197
MabI	ACCWGGT	2 cut(s)	1645, 1858
MaeI	CTAG	4 cut(s)	597, 750, 1673, 1952
MaeII	ACGT	4 cut(s)	25, 54, 332, 1878
MaeIII	GTNAC	3 cut(s)	169, 680, 874
MbiI	CCGCTC	1 cut(s)	1840
MboII	GAAGA	5 cut(s)	471, 1103, 1442, 1568, 1891
MfeI	CAATTG	2 cut(s)	695, 1958
MflI	RGATCY	3 cut(s)	821, 943, 1592
MhlI	GDGCHC	2 cut(s)	1654, 1746
MlsI	TGGCCA	1 cut(s)	431
MluCI	AATT	9 cut(s)	105, 626, 695, 900, 1261, 1958, 1979, 2041, 2254
MluNI	TGGCCA	1 cut(s)	431
Mly113I	GGCGCC	1 cut(s)	1507
MlyI	GAGTC	3 cut(s)	193, 1722, 1991
MmeI	TCCRAC	4 cut(s)	93, 1237, 1404, 1850
Mox20I	TGGCCA	1 cut(s)	431
Mph1103I	ATGCAT	3 cut(s)	714, 1153, 1530
MscI	TGGCCA	1 cut(s)	431
MslI	CAYNNNNRTG	3 cut(s)	437, 1386, 1657
Msp20I	TGGCCA	1 cut(s)	431
MspA1I	CMGCKG	2 cut(s)	394, 802
MspI	CCGG	5 cut(s)	12, 116, 181, 203, 1684
MspR9I	CCNGG	8 cut(s)	13, 116, 181, 731, 998, 1551, 1647, 1860
MunI	CAATTG	2 cut(s)	695, 1958
Mva1269I	GAATGC	6 cut(s)	451, 649, 964, 988, 1360, 2246
MvaI	CCWGG	5 cut(s)	731, 998, 1551, 1647, 1860
MwoI	GCNNNNNNNGC	7 cut(s)	388, 644, 796, 1187, 1364, 1373, 1673
NarI	GGCGCC	1 cut(s)	1507
NciI	CCSGG	3 cut(s)	13, 116, 181
NdeI	CATATG	1 cut(s)	1762
NlaIV	GGNNCC	4 cut(s)	1508, 1743, 1922, 2107
NmeAIII	GCCGAG	1 cut(s)	1897
NmuCI	GTSAC	3 cut(s)	169, 680, 874
NsiI	ATGCAT	3 cut(s)	714, 1153, 1530
NspI	RCATGY	2 cut(s)	214, 809
OliI	CACNNNNGTG	1 cut(s)	437
PaeI	GCATGC	2 cut(s)	214, 809
PagI	TCATGA	1 cut(s)	2088
PctI	GAATGC	6 cut(s)	451, 649, 964, 988, 1360, 2246
PfeI	GAWTC	4 cut(s)	724, 1340, 2024, 2128
PflFI	GACNNNGTC	1 cut(s)	122
PfoI	TCCNGGA	1 cut(s)	996
PleI	GAGTC	3 cut(s)	193, 1722, 1991
PluTI	GGCGCC	1 cut(s)	1510
PmaCI	CACGTG	1 cut(s)	26
PmlI	CACGTG	1 cut(s)	26
PpsI	GAGTC	3 cut(s)	193, 1722, 1991
Ppu21I	YACGTR	1 cut(s)	26
PpuMI	RGGWCCY	1 cut(s)	583
Psp5II	RGGWCCY	1 cut(s)	583
Psp6I	CCWGG	5 cut(s)	729, 996, 1549, 1645, 1858
PspCI	CACGTG	1 cut(s)	26
PspGI	CCWGG	5 cut(s)	729, 996, 1549, 1645, 1858
PspN4I	GGNNCC	4 cut(s)	1508, 1743, 1922, 2107
PspPI	GGNCC	4 cut(s)	178, 583, 1891, 1963
PspPPI	RGGWCCY	1 cut(s)	583
PstI	CTGCAG	1 cut(s)	1723
PsuI	RGATCY	3 cut(s)	821, 943, 1592
PsyI	GACNNNGTC	1 cut(s)	122
PvuII	CAGCTG	2 cut(s)	394, 802
RsaI	GTAC	2 cut(s)	1767, 1943
RsaNI	GTAC	2 cut(s)	1766, 1942
RseI	CAYNNNNRTG	3 cut(s)	437, 1386, 1657
Sau96I	GGNCC	4 cut(s)	178, 583, 1891, 1963
SchI	GAGTC	3 cut(s)	193, 1722, 1991
ScrFI	CCNGG	8 cut(s)	13, 116, 181, 731, 998, 1551, 1647, 1860
SduI	GDGCHC	2 cut(s)	1654, 1746
SexAI	ACCWGGT	2 cut(s)	1645, 1858
SfaNI	GCATC	4 cut(s)	676, 1002, 1084, 2197
SfcI	CTRYAG	1 cut(s)	1719
SfoI	GGCGCC	1 cut(s)	1508
SinI	GGWCC	3 cut(s)	583, 1891, 1963
SmiMI	CAYNNNNRTG	3 cut(s)	437, 1386, 1657
SmlI	CTYRAG	1 cut(s)	1218
SmoI	CTYRAG	1 cut(s)	1218
SpeI	ACTAGT	1 cut(s)	749
SphI	GCATGC	2 cut(s)	214, 809
Sse9I	AATT	9 cut(s)	105, 626, 695, 900, 1261, 1958, 1979, 2041, 2254
SsiI	CCGC	4 cut(s)	309, 500, 991, 1840
SspDI	GGCGCC	1 cut(s)	1506
SspMI	CTAG	4 cut(s)	597, 750, 1673, 1952
StyD4I	CCNGG	8 cut(s)	11, 114, 179, 729, 996, 1549, 1645, 1858
StyI	CCWWGG	1 cut(s)	1614
TaaI	ACNGT	8 cut(s)	44, 223, 674, 841, 1054, 1313, 1541, 2060
TaiI	ACGT	4 cut(s)	28, 57, 335, 1881
TaqI	TCGA	2 cut(s)	99, 443
TasI	AATT	9 cut(s)	105, 626, 695, 900, 1261, 1958, 1979, 2041, 2254
TatI	WGTACW	2 cut(s)	1765, 1941
TauI	GCSGC	2 cut(s)	503, 993
TfiI	GAWTC	4 cut(s)	724, 1340, 2024, 2128
TscAI	CASTG	5 cut(s)	226, 346, 389, 766, 2065
TseFI	GTSAC	3 cut(s)	169, 680, 874
Tsp45I	GTSAC	3 cut(s)	169, 680, 874
TspDTI	ATGAA	5 cut(s)	921, 942, 1115, 2105, 2210
TspGWI	ACGGA	2 cut(s)	925, 1333
TspRI	CASTG	5 cut(s)	226, 346, 389, 766, 2065
Tth111I	GACNNNGTC	1 cut(s)	122
VneI	GTGCAC	1 cut(s)	1650
VpaK11BI	GGWCC	3 cut(s)	583, 1891, 1963
XapI	RAATTY	3 cut(s)	105, 1261, 2041
XbaI	TCTAGA	1 cut(s)	1951
XceI	RCATGY	2 cut(s)	214, 809
XcmI	CCANNNNNNNNNTGG	1 cut(s)	136
XmiI	GTMKAC	3 cut(s)	57, 740, 2051
XspI	CTAG	4 cut(s)	597, 750, 1673, 1952
ZraI	GACGTC	1 cut(s)	55
Zsp2I	ATGCAT	3 cut(s)	714, 1153, 1530

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.