Rw7G029100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0004093
Physical Location & Seq
Forward (+)
40175225 .. 40178472
3248 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G029100.1

Sequence Viewer

Length: 2283 bp
ATGATCGCTTCCGGCTTCCACCCACGTGGCCATATCCTCAACCGTTTGATCGACGTCTACTGCAAATCTTCAAATCTTCGCTACGCACTCCACCTGTTCGACCAAATTCCCAACCCGGACATCGTCGCCAGAACGACTCTAGTCTCGGCATATTCCGGCGTCGGGGACGTCACGCTGGCCCGGAGAGTCTTCAGTGAAACTCCGCTCAGCATGAGAGACACTGTTAGCTACAATGCCATGATCGCAGGCTACTCTCATAACAGGGACGGCAATGCCGCCGTTGAGCTGTTTCGTGACATGAGGCGAGGCGGTTTTCGCCCCGATGAGTTTACCTTCACCAGCGTGCTGAGTTCTCTGGCGCTTATAGTGGAGGAGGAGAAGCAATGCGAGCAGCTGCATTGTGCAATTGTTAAGTCTGGAGCATTGCTGGCCACTTCGGTGTCAAATGCGTTGGTGTCTGTGTATGTTAAGTGTGCTTCTTCGCCGTTGGTGTCGGCGTCCTCGGTGGTGGTGGCTGCAGCGAGGAAGGTGTTTGATGAAATGCCTATAAGAGATGAGCTGTCGTGGACGACGATGATTACTGGCTATGTGAGGAATGAGGACCTTGATGGAGCTCGGCAGCTGCTTGATGGGATGGATGAAAAATTGCAAGTGGCGTGGAATGCCATGATTTCGGGTTATGTGCATCACGGTTTTTGTCATGAAGCATTGAAATTGTTTAGGGAAATGCATTTAATGGGGATTCGCCAGGATGAGTTTACGTACACGAGTGTTATCAGTGCTTGTGCTAACAATGGCTTATTTAAGCATGGGAAGCAGCTGCATGCTTACATACTAAGATCTGAAGCGAAACCGACTCTGGACTTTTCTTTATCTGTGAATAATGCATTGGTGACACTATACTTTAGGTGCGGTAAAATTGATGAAGCACGATATATTTTTAATAATATGTCTGTCAGAGATCTTGTTTCTTGGAATGCGATATTGTCAGGGTATGTGAGTGCAGGGCGCATTCAGGAAGCAAAGTCCTTTTTTGAGGAAATGCCGGAAAGGAGTGGTCTAACGTGGACTGTAATAATATCTGGTTTAGCTCAAAATGGATGTGGGGAAGAAGCTATGAAGCTATTTAACCAAATGAGATTAGATGGTTTTAAACCCTGTGATTATGCATTTGCTGGAGCTCTTACGTCTTGTGCTGCTCTTGGGGCATTGGAGCATGGACGCCAGCTCCATGCTCAACTAATATGCTTGGGGCATGATTCAAGCCTTTCAGTCGGAAATTCACTTATTACGATGTATGCAAGATGTGGGGTTGTAGATGATGCTGACTTTGTGTTCCTTACAATGCCTTATATTGATTCCGTGTCGTGGAATGCTATGATCGCAGCTCTGGCACAACATGGATATGGTGTCCAAGCAATAAGACTTTTCGAACAAATGTTGGAGGAAGATATACTGCCAGATAGAATAACTTTCCTCACTATTCTCTCAGCTTGTAGTCATGCTGGTTTAGTTAAAGAAGGACACCATTATTTTCGTTTAATGCATGACTCTTATGGTATTGCCCCTGGTGAAGATCATTATGCTCGTATGATTGATTTGTTGTGCCGATCTGGGGAGTTGACAGAGGCCAAGGACTTAATCAAATCAATGCCTTTTGAACCAGGTGCACCGATATGGGAGGCTATTCTAGCTGGTTGCCGGACTCATGGGAATATGGATTTAGGTATTCAAGCTGCAGAACGACTCTTTGAGCTGGTGCCCCAGCATGATGGAACCTATGTACTTTTGTCTAACTTGTATGCTGCTTTAGGCCGTTGGGATAATGTGGCTAAGGTGCGAACACTAATGAGGGAGCGAGGGGTGAAGAAAGAACCTGGTTGTAGTTGGATTGACGTTGAAAATATGGTCCATGTCTTCTTGGTTGGTGATACTGTGCACCCTGAGGTACATGAGGTGTACAAGTATCTAGAGCAACTTGTTCTTAAAATGAGGAAGTTAGGATATGTTCCTGACACAAAGTTTGCGTTGCATGATATGGAGTCTGAGCATAAAGAGAATTCCTTGTCTACTCACAGTGAGAAGCTTGCAGTTGCATTTGGGATTATGAAGCTTCCTCTTGGAGCCACAATCAGAGTTTTTAAGAATCTTAGGATTTGTGGGGATTGCCACAATGCATTTAAGTTTATGTCAAGAGTGGTTGGGAGAGAAATAGTCGTGAGAGACGCCAAGAGGTTTCATCATTTTAGGAAAGGCGAATGCTCTTGTGGAAATTACTGGTAG

Protein Analysis

760

Amino Acids

84.98

Weight (kDa)

6.4

Isoelectric Point (pI)

33.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 72 - 120 1.6e-14 PPR repeat family
PPR PF01535 75 - 105 5.7e-07 PPR repeat
PPR_2 PF13041 218 - 264 2.4e-12 PPR repeat family
PPR PF01535 218 - 248 3.6e-09 PPR repeat
PPR_2 PF13041 321 - 351 2e-06 PPR repeat family
PPR PF01535 323 - 351 4.1e-07 PPR repeat
PPR_2 PF13041 355 - 395 7.6e-07 PPR repeat family
PPR PF01535 355 - 384 8.3e-08 PPR repeat
PPR_2 PF13041 453 - 500 1.3e-10 PPR repeat family
PPR PF01535 455 - 485 3.2e-06 PPR repeat
E_motif PF20431 570 - 632 7e-22 E motif
DYW_deaminase PF14432 668 - 760 3.4e-42 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 57, 171
AccB1I GGYRCC 1 cut(s) 1759
AccBSI CCGCTC 1 cut(s) 205
AccI GTMKAC 2 cut(s) 57, 2069
AciI CCGC 4 cut(s) 203, 276, 309, 912
AcoI YGGCCR 2 cut(s) 28, 429
AcsI RAATTY 3 cut(s) 105, 1279, 2059
AcuI CTGAAG 2 cut(s) 175, 864
AcvI CACGTG 1 cut(s) 26
AcyI GRCGYC 6 cut(s) 54, 159, 168, 497, 1222, 2226
AfaI GTAC 4 cut(s) 764, 1785, 1950, 1961
AfiI CCNNNNNNNGG 3 cut(s) 162, 1368, 1615
AgsI TTSAA 6 cut(s) 72, 712, 1263, 1661, 1733, 1901
AjnI CCWGG 4 cut(s) 747, 1567, 1663, 1876
AjuI GAANNNNNNNTTGG 2 cut(s) 872, 904
AleI CACNNNNGTG 3 cut(s) 24, 341, 437
Alw21I GWGCWC 4 cut(s) 616, 1183, 1672, 1941
Alw26I GTCTC 3 cut(s) 148, 210, 2217
Alw44I GTGCAC 2 cut(s) 1668, 1937
AoxI GGCC 5 cut(s) 28, 177, 429, 1629, 1813
ApaLI GTGCAC 2 cut(s) 1668, 1937
ApoI RAATTY 3 cut(s) 105, 1279, 2059
ArsI GACNNNNNNTTYG 2 cut(s) 2006, 2038
AspLEI GCGC 2 cut(s) 361, 1011
AspS9I GGNCC 3 cut(s) 178, 601, 1909
AsuC2I CCSGG 2 cut(s) 116, 181
AsuHPI GGTGA 5 cut(s) 328, 904, 1583, 1876, 1940
AsuII TTCGAA 1 cut(s) 1431
AvaII GGWCC 2 cut(s) 601, 1909
AxyI CCTNAGG 1 cut(s) 1944
BaeGI GKGCMC 3 cut(s) 1672, 1764, 1941
BalI TGGCCA 2 cut(s) 30, 431
BanI GGYRCC 1 cut(s) 1759
BanII GRGCYC 2 cut(s) 616, 1183
BauI CACGAG 1 cut(s) 766
BbrPI CACGTG 1 cut(s) 26
BbsI GAAGAC 2 cut(s) 181, 1909
Bbv12I GWGCWC 4 cut(s) 616, 1183, 1672, 1941
BccI CCATC 5 cut(s) 602, 623, 628, 1139, 1766
BceAI ACGGC 4 cut(s) 263, 283, 469, 1800
BciT130I CCWGG 4 cut(s) 749, 1569, 1665, 1878
BcnI CCSGG 2 cut(s) 116, 181
BcoDI GTCTC 3 cut(s) 148, 210, 2217
BfaI CTAG 3 cut(s) 140, 1691, 1970
BfmI CTRYAG 2 cut(s) 516, 1737
BfoI RGCGCY 1 cut(s) 362
BglII AGATCT 2 cut(s) 839, 961
BlpI GCTNAGC 1 cut(s) 206
Bme1390I CCNGG 6 cut(s) 116, 181, 749, 1569, 1665, 1878
Bme18I GGWCC 2 cut(s) 601, 1909
BmgT120I GGNCC 3 cut(s) 178, 601, 1909
BmiI GGNNCC 3 cut(s) 1761, 1777, 2125
BmrFI CCNGG 6 cut(s) 116, 181, 749, 1569, 1665, 1878
BmsI GCATC 2 cut(s) 694, 1312
BoxI GACNNNNGTC 1 cut(s) 140
BpiI GAAGAC 2 cut(s) 181, 1909
BpmI CTGGAG 2 cut(s) 438, 1197
Bpu10I CCTNAGC 1 cut(s) 1833
Bpu1102I GCTNAGC 1 cut(s) 206
Bpu14I TTCGAA 1 cut(s) 1431
BpuMI CCSGG 2 cut(s) 116, 181
BsaAI YACGTR 2 cut(s) 26, 762
BsaHI GRCGYC 6 cut(s) 54, 159, 168, 497, 1222, 2226
BsaJI CCNNGG 3 cut(s) 501, 1567, 1632
BsaXI ACNNNNNCTCC 2 cut(s) 1212, 1242
Bsc4I CCNNNNNNNGG 3 cut(s) 162, 1368, 1615
Bse1I ACTGG 2 cut(s) 586, 2282
Bse21I CCTNAGG 1 cut(s) 1944
Bse3DI GCAATG 3 cut(s) 277, 389, 422
BseBI CCWGG 4 cut(s) 749, 1569, 1665, 1878
BseDI CCNNGG 3 cut(s) 501, 1567, 1632
BseGI GGATG 4 cut(s) 639, 643, 757, 1106
BseLI CCNNNNNNNGG 3 cut(s) 162, 1368, 1615
BseMI GCAATG 3 cut(s) 277, 389, 422
BseMII CTCAG 5 cut(s) 220, 338, 1503, 1935, 2037
BseNI ACTGG 2 cut(s) 586, 2282
BseRI GAGGAG 2 cut(s) 386, 389
BseSI GKGCMC 3 cut(s) 1672, 1764, 1941
BseYI CCCAGC 1 cut(s) 1764
BsgI GTGCAG 1 cut(s) 1023
BshFI GGCC 5 cut(s) 30, 179, 431, 1631, 1815
BshNI GGYRCC 1 cut(s) 1759
BsiHKAI GWGCWC 4 cut(s) 616, 1183, 1672, 1941
BsiSI CCGG 6 cut(s) 12, 116, 156, 181, 1046, 1702
BslFI GGGAC 2 cut(s) 179, 278
BslI CCNNNNNNNGG 3 cut(s) 162, 1368, 1615
BsmAI GTCTC 3 cut(s) 148, 210, 2217
BsmBI CGTCTC 1 cut(s) 2217
BsmFI GGGAC 2 cut(s) 179, 278
BsmI GAATGC 5 cut(s) 667, 982, 1011, 1378, 2264
BsnI GGCC 5 cut(s) 30, 179, 431, 1631, 1815
Bsp119I TTCGAA 1 cut(s) 1431
Bsp1286I GDGCHC 5 cut(s) 616, 1183, 1672, 1764, 1941
Bsp1407I TGTACA 1 cut(s) 1959
Bsp143I GATC 8 cut(s) 3, 48, 240, 839, 961, 1380, 1576, 1610
Bsp1720I GCTNAGC 1 cut(s) 206
BspACI CCGC 4 cut(s) 203, 276, 309, 912
BspANI GGCC 5 cut(s) 30, 179, 431, 1631, 1815
BspCNI CTCAG 5 cut(s) 219, 339, 1502, 1936, 2038
BspHI TCATGA 1 cut(s) 700
BspLI GGNNCC 3 cut(s) 1761, 1777, 2125
BspMAI CTGCAG 2 cut(s) 520, 1741
BspT104I TTCGAA 1 cut(s) 1431
BspT107I GGYRCC 1 cut(s) 1759
BsrBI CCGCTC 1 cut(s) 205
BsrDI GCAATG 3 cut(s) 277, 389, 422
BsrGI TGTACA 1 cut(s) 1959
BsrI ACTGG 2 cut(s) 586, 2282
BssECI CCNNGG 3 cut(s) 501, 1567, 1632
BssMI GATC 8 cut(s) 3, 48, 240, 839, 961, 1380, 1576, 1610
BssNI GRCGYC 6 cut(s) 54, 159, 168, 497, 1222, 2226
BssSI CACGAG 1 cut(s) 766
BssT1I CCWWGG 1 cut(s) 1632
Bst2BI CACGAG 1 cut(s) 766
Bst2UI CCWGG 4 cut(s) 749, 1569, 1665, 1878
Bst4CI ACNGT 6 cut(s) 44, 223, 692, 1072, 1936, 2078
BstACI GRCGYC 6 cut(s) 54, 159, 168, 497, 1222, 2226
BstAUI TGTACA 1 cut(s) 1959
BstBAI YACGTR 2 cut(s) 26, 762
BstBI TTCGAA 1 cut(s) 1431
BstC8I GCNNGC 8 cut(s) 177, 247, 344, 389, 429, 825, 1226, 2088
BstDEI CTNAG 8 cut(s) 206, 347, 836, 1489, 1833, 1944, 2046, 2150
BstF5I GGATG 4 cut(s) 639, 643, 757, 1106
BstH2I RGCGCY 1 cut(s) 362
BstHHI GCGC 2 cut(s) 361, 1011
BstKTI GATC 8 cut(s) 6, 51, 243, 842, 964, 1383, 1579, 1613
BstMAI GTCTC 3 cut(s) 148, 210, 2217
BstMBI GATC 8 cut(s) 3, 48, 240, 839, 961, 1380, 1576, 1610
BstNI CCWGG 4 cut(s) 749, 1569, 1665, 1878
BstNSI RCATGY 1 cut(s) 827
BstPAI GACNNNNGTC 1 cut(s) 140
BstSCI CCNGG 6 cut(s) 114, 179, 747, 1567, 1663, 1876
BstSFI CTRYAG 2 cut(s) 516, 1737
BstSLI GKGCMC 3 cut(s) 1672, 1764, 1941
BstSNI TACGTA 1 cut(s) 762
BstV2I GAAGAC 2 cut(s) 181, 1909
BstX2I RGATCY 2 cut(s) 839, 961
BstXI CCANNNNNNTGG 2 cut(s) 26, 1772
BstYI RGATCY 2 cut(s) 839, 961
Bsu36I CCTNAGG 1 cut(s) 1944
BsuRI GGCC 5 cut(s) 30, 179, 431, 1631, 1815
BtsCI GGATG 4 cut(s) 639, 643, 757, 1106
BtsIMutI CAGTG 4 cut(s) 199, 219, 784, 2083
Cac8I GCNNGC 8 cut(s) 177, 247, 344, 389, 429, 825, 1226, 2088
CciI TCATGA 1 cut(s) 700
CfoI GCGC 2 cut(s) 361, 1011
Cfr13I GGNCC 3 cut(s) 178, 601, 1909
CseI GACGC 4 cut(s) 148, 486, 1230, 2234
CsiI ACCWGGT 2 cut(s) 1663, 1876
Csp6I GTAC 4 cut(s) 763, 1784, 1949, 1960
CspCI CAANNNNNGTGG 2 cut(s) 638, 673
CviQI GTAC 4 cut(s) 763, 1784, 1949, 1960
DdeI CTNAG 8 cut(s) 206, 347, 836, 1489, 1833, 1944, 2046, 2150
DpnI GATC 8 cut(s) 5, 50, 242, 841, 963, 1382, 1578, 1612
DpnII GATC 8 cut(s) 3, 48, 240, 839, 961, 1380, 1576, 1610
DraI TTTAAA 1 cut(s) 1153
EaeI YGGCCR 2 cut(s) 28, 429
Ecl136II GAGCTC 2 cut(s) 614, 1181
Eco105I TACGTA 1 cut(s) 762
Eco130I CCWWGG 1 cut(s) 1632
Eco24I GRGCYC 2 cut(s) 616, 1183
Eco47I GGWCC 2 cut(s) 601, 1909
Eco53kI GAGCTC 2 cut(s) 614, 1181
Eco57I CTGAAG 2 cut(s) 175, 864
Eco72I CACGTG 1 cut(s) 26
Eco81I CCTNAGG 1 cut(s) 1944
EcoICRI GAGCTC 2 cut(s) 614, 1181
EcoO109I RGGNCCY 1 cut(s) 601
EcoRI GAATTC 1 cut(s) 2059
EcoRII CCWGG 4 cut(s) 747, 1567, 1663, 1876
EcoT14I CCWWGG 1 cut(s) 1632
EcoT22I ATGCAT 5 cut(s) 732, 889, 1171, 1548, 2179
EcoT38I GRGCYC 2 cut(s) 616, 1183
ErhI CCWWGG 1 cut(s) 1632
Esp3I CGTCTC 1 cut(s) 2217
FaqI GGGAC 2 cut(s) 179, 278
FblI GTMKAC 2 cut(s) 57, 2069
FokI GGATG 4 cut(s) 646, 650, 764, 1113
FriOI GRGCYC 2 cut(s) 616, 1183
FspBI CTAG 3 cut(s) 140, 1691, 1970
GlaI GCGC 2 cut(s) 360, 1010
GsaI CCCAGC 1 cut(s) 1768
GsuI CTGGAG 2 cut(s) 438, 1197
HaeII RGCGCY 1 cut(s) 362
HaeIII GGCC 5 cut(s) 30, 179, 431, 1631, 1815
HapII CCGG 6 cut(s) 12, 116, 156, 181, 1046, 1702
HgaI GACGC 4 cut(s) 148, 486, 1230, 2234
HhaI GCGC 2 cut(s) 361, 1011
Hin1I GRCGYC 6 cut(s) 54, 159, 168, 497, 1222, 2226
Hin6I GCGC 2 cut(s) 359, 1009
HinP1I GCGC 2 cut(s) 359, 1009
HincII GTYRAC 1 cut(s) 1623
HindII GTYRAC 1 cut(s) 1623
HindIII AAGCTT 2 cut(s) 2084, 2111
HpaII CCGG 6 cut(s) 12, 116, 156, 181, 1046, 1702
HphI GGTGA 5 cut(s) 328, 904, 1583, 1876, 1940
Hpy188I TCNGA 5 cut(s) 844, 959, 1277, 2047, 2135
Hpy188III TCNNGA 9 cut(s) 293, 417, 701, 860, 1016, 1970, 2012, 2193, 2218
Hpy99I CGWCG 4 cut(s) 56, 128, 164, 574
HpyAV CCTTC 3 cut(s) 343, 520, 1514
HpyCH4III ACNGT 6 cut(s) 44, 223, 692, 1072, 1936, 2078
HpyCH4IV ACGT 7 cut(s) 25, 54, 168, 761, 1064, 1187, 1896
HpyF3I CTNAG 8 cut(s) 206, 347, 836, 1489, 1833, 1944, 2046, 2150
HpySE526I ACGT 7 cut(s) 25, 54, 168, 761, 1064, 1187, 1896
Hsp92I GRCGYC 6 cut(s) 54, 159, 168, 497, 1222, 2226
HspAI GCGC 2 cut(s) 359, 1009
Kzo9I GATC 8 cut(s) 3, 48, 240, 839, 961, 1380, 1576, 1610
LmnI GCTCC 7 cut(s) 419, 611, 1178, 1213, 1233, 1855, 2123
LweI GCATC 2 cut(s) 694, 1312
MabI ACCWGGT 2 cut(s) 1663, 1876
MaeI CTAG 3 cut(s) 140, 1691, 1970
MaeII ACGT 7 cut(s) 25, 54, 168, 761, 1064, 1187, 1896
MaeIII GTNAC 3 cut(s) 169, 293, 892
MalI GATC 8 cut(s) 5, 50, 242, 841, 963, 1382, 1578, 1612
MbiI CCGCTC 1 cut(s) 205
MboI GATC 8 cut(s) 3, 48, 240, 839, 961, 1380, 1576, 1610
MboII GAAGA 9 cut(s) 60, 68, 181, 471, 1121, 1460, 1586, 1879, 1909
MfeI CAATTG 1 cut(s) 405
MflI RGATCY 2 cut(s) 839, 961
MhlI GDGCHC 5 cut(s) 616, 1183, 1672, 1764, 1941
MlsI TGGCCA 2 cut(s) 30, 431
MluCI AATT 8 cut(s) 105, 405, 644, 713, 918, 1279, 2059, 2272
MluNI TGGCCA 2 cut(s) 30, 431
MlyI GAGTC 7 cut(s) 130, 195, 850, 1544, 1699, 1740, 2051
MmeI TCCRAC 3 cut(s) 1255, 1422, 1868
Mox20I TGGCCA 2 cut(s) 30, 431
Mph1103I ATGCAT 5 cut(s) 732, 889, 1171, 1548, 2179
MscI TGGCCA 2 cut(s) 30, 431
MslI CAYNNNNRTG 5 cut(s) 24, 341, 437, 1404, 1675
Msp20I TGGCCA 2 cut(s) 30, 431
MspA1I CMGCKG 3 cut(s) 394, 622, 820
MspI CCGG 6 cut(s) 12, 116, 156, 181, 1046, 1702
MspR9I CCNGG 6 cut(s) 116, 181, 749, 1569, 1665, 1878
MunI CAATTG 1 cut(s) 405
Mva1269I GAATGC 5 cut(s) 667, 982, 1011, 1378, 2264
MvaI CCWGG 4 cut(s) 749, 1569, 1665, 1878
NciI CCSGG 2 cut(s) 116, 181
NdeII GATC 8 cut(s) 3, 48, 240, 839, 961, 1380, 1576, 1610
NlaIV GGNNCC 3 cut(s) 1761, 1777, 2125
NmeAIII GCCGAG 2 cut(s) 125, 595
NmuCI GTSAC 3 cut(s) 169, 293, 892
NsiI ATGCAT 5 cut(s) 732, 889, 1171, 1548, 2179
NspI RCATGY 1 cut(s) 827
NspV TTCGAA 1 cut(s) 1431
OliI CACNNNNGTG 3 cut(s) 24, 341, 437
PaeI GCATGC 1 cut(s) 827
PagI TCATGA 1 cut(s) 700
PcsI WCGNNNNNNNCGW 1 cut(s) 569
PctI GAATGC 5 cut(s) 667, 982, 1011, 1378, 2264
PfeI GAWTC 4 cut(s) 742, 1259, 1358, 2146
PflFI GACNNNGTC 1 cut(s) 122
PleI GAGTC 7 cut(s) 130, 194, 850, 1544, 1699, 1740, 2050
PmaCI CACGTG 1 cut(s) 26
PmlI CACGTG 1 cut(s) 26
PpsI GAGTC 7 cut(s) 130, 194, 850, 1544, 1699, 1740, 2050
Ppu21I YACGTR 2 cut(s) 26, 762
PpuMI RGGWCCY 1 cut(s) 601
PshAI GACNNNNGTC 1 cut(s) 140
Psp124BI GAGCTC 2 cut(s) 616, 1183
Psp5II RGGWCCY 1 cut(s) 601
Psp6I CCWGG 4 cut(s) 747, 1567, 1663, 1876
PspCI CACGTG 1 cut(s) 26
PspFI CCCAGC 1 cut(s) 1764
PspGI CCWGG 4 cut(s) 747, 1567, 1663, 1876
PspN4I GGNNCC 3 cut(s) 1761, 1777, 2125
PspPI GGNCC 3 cut(s) 178, 601, 1909
PspPPI RGGWCCY 1 cut(s) 601
PstI CTGCAG 2 cut(s) 520, 1741
PsuI RGATCY 2 cut(s) 839, 961
PsyI GACNNNGTC 1 cut(s) 122
PvuII CAGCTG 3 cut(s) 394, 622, 820
RsaI GTAC 4 cut(s) 764, 1785, 1950, 1961
RsaNI GTAC 4 cut(s) 763, 1784, 1949, 1960
RseI CAYNNNNRTG 5 cut(s) 24, 341, 437, 1404, 1675
SacI GAGCTC 2 cut(s) 616, 1183
Sau3AI GATC 8 cut(s) 3, 48, 240, 839, 961, 1380, 1576, 1610
Sau96I GGNCC 3 cut(s) 178, 601, 1909
SchI GAGTC 7 cut(s) 130, 195, 850, 1544, 1699, 1740, 2051
ScrFI CCNGG 6 cut(s) 116, 181, 749, 1569, 1665, 1878
SduI GDGCHC 5 cut(s) 616, 1183, 1672, 1764, 1941
SexAI ACCWGGT 2 cut(s) 1663, 1876
SfaNI GCATC 2 cut(s) 694, 1312
SfcI CTRYAG 2 cut(s) 516, 1737
SfuI TTCGAA 1 cut(s) 1431
SinI GGWCC 2 cut(s) 601, 1909
SmiMI CAYNNNNRTG 5 cut(s) 24, 341, 437, 1404, 1675
SnaBI TACGTA 1 cut(s) 762
SphI GCATGC 1 cut(s) 827
Sse9I AATT 8 cut(s) 105, 405, 644, 713, 918, 1279, 2059, 2272
SsiI CCGC 4 cut(s) 203, 276, 309, 912
SspMI CTAG 3 cut(s) 140, 1691, 1970
SstI GAGCTC 2 cut(s) 616, 1183
StyD4I CCNGG 6 cut(s) 114, 179, 747, 1567, 1663, 1876
StyI CCWWGG 1 cut(s) 1632
TaaI ACNGT 6 cut(s) 44, 223, 692, 1072, 1936, 2078
TaiI ACGT 7 cut(s) 28, 57, 171, 764, 1067, 1190, 1899
TaqI TCGA 3 cut(s) 51, 99, 1431
TasI AATT 8 cut(s) 105, 405, 644, 713, 918, 1279, 2059, 2272
TatI WGTACW 2 cut(s) 1783, 1959
TauI GCSGC 1 cut(s) 278
TfiI GAWTC 4 cut(s) 742, 1259, 1358, 2146
TscAI CASTG 4 cut(s) 199, 226, 784, 2083
TseFI GTSAC 3 cut(s) 169, 293, 892
Tsp45I GTSAC 3 cut(s) 169, 293, 892
TspDTI ATGAA 7 cut(s) 552, 654, 717, 939, 1133, 2123, 2228
TspGWI ACGGA 1 cut(s) 1351
TspRI CASTG 4 cut(s) 199, 226, 784, 2083
Tth111I GACNNNGTC 1 cut(s) 122
VneI GTGCAC 2 cut(s) 1668, 1937
VpaK11BI GGWCC 2 cut(s) 601, 1909
XapI RAATTY 3 cut(s) 105, 1279, 2059
XbaI TCTAGA 1 cut(s) 1969
XceI RCATGY 1 cut(s) 827
XmiI GTMKAC 2 cut(s) 57, 2069
XspI CTAG 3 cut(s) 140, 1691, 1970
ZraI GACGTC 2 cut(s) 55, 169
Zsp2I ATGCAT 5 cut(s) 732, 889, 1171, 1548, 2179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.