Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005016.1

Orthogroup ID

OG0004093

Physical Location & Seq

Genomic Coordinates Reverse (-)

160140 .. 162554

Gene Structure 2415 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005016.1_g000036.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ctgcctctgcctcgtcctcgtcctcaccctcaccctcttacggtggcggctaaccgttacgccgcccagctgcagctatgctgcccccaacgccccacctcctactctctagcccgaaccatccacgcccacatgatcgcttccggcttccacccacgtggccatatcctcaaccgtttgatcgacgtctactgcaaatcttcaaatcttcgctacgcactccacctgttcgaccaaattcccaacccggacatcgtcgccagaacgactctagtctcggcatattccggcgtcggggacgtcacgctggcccggagagtcttcagtgaaactccgctcagcatgagagacactgttagctacaatgccatgatcgcaggctactctcataacagggacggcaatgccgccgttgagctgtttcgtgacatgaggcaaggcggttttcgccccgatgagtttaccttcaccagcgtgctgagttctctggcgcttatagtggaggaggagaagcaatgcgagcagctgcattgtgcaattgttaagtctggagcattgctggccacttcggtgtcaaatgcgttggtgtctgtgtatgttaagtgtgcttcttcgccgttggtgtcggcgtcctcggtggtggtggctgcagcgaggaaggtgtttgatgaaatgcctatgagagatgagctgtcgtggacgacgatgattactggctatgtgaggaatgaggaccttgatggagctcggcagctgcttgatgggatggatgaaaaattgcaagtggcgtggaatgccatgatttcgggttatgtgcatcacggtttttgtcatgaagcattgaaattgtttagggaaatgcatttaatggggattcgccaggatgagtttacgtacacgagtgttatcagtgcttgtgctaacaatggcttatttaagcatgggaagcagctgcatgcttacatactaagatctgaagcaaaaccgactctggacttttctttatctgtgaataatgcattggtgacactatactttaggtgcggtaaaattgatgaagcacgatatatttttaataatatgtctgtcagagatcttgtttcttggaatgcgatattgtcagggtatgtgagtgcagggcgcattcaggaagcaaagtccttttttgaggaaatgccggaaaggagtggtttaacgtggactgtaataatatctggtttagctcaaaatggatgtggggaagaagctatgaagctatttaaccaaatgagattagatggttttaaaccctgtgattatgcatttgctggagctattacgtcttgtgctgctcttggggcattggagcacggacgccagctccatgctcaactaatatgcttggggcatgattcaagcctttcagtcggaaattcacttattacgatgtatgcgagatgtggggttgtagatgatgctgactttgtgttccttacaatgccttatattgattccgtgtcgtggaatgctatgatcgcagctctggcacaacatggatatggtgtccaagcaataagacttttcgaacaaatgttggaggaagatatactgccagatagaataactttcctcactattctctcagcttgtagtcatgctggtttagttaaagaaggacgccattattttcgtttaatgcatgactcttatggaattgcccctggtgaagatcattatgctcgtatgattgatttgttgtgccgatctggggagttgacagaggccaaggacttaatcaaatcaatgccttttgaaccaggtgcaccgatatgggaggctattctagctggttgccggactcatgggaatatggatttaggtattcaagccgcagaacgactctttgagctggtgccccagcatgatggaacctatgtacttttgtctaacttgtatgctgctttaggccgttgggataatgtggctaaggtgcgaacactaatgagggagcgaggggtgaagaaagaacctggttgtagttggattgatgttgaaaatatggtccatgtcttcttggttggtgatactgtgcaccctgaggtacatgaggtgtacaagtatctagagcaacttgttcttaaaatgaggaagttaggatatgttcctgacacaaagtttgcgttgcatgatatggagtctgagcataaagagaattccttgtctactcacagtgagaagcttgcagttgcatttgggattatgaagcttcctcttggagccacaatcagagtttttaagaatcttaggatttgtggggattgccataatgcatttaagtttatgtcaagagtggttgggagagaaatagtcgtgagagacgccaagaggtttcatcattttaggaaaggcgaatgctcttgtggaaattactggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

804

Amino Acids

89.93

Weight (kDa)

6.84

Isoelectric Point (pI)

33.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25360
fragaria_vesca	FvH4_5g32410 FvH4_6g08990
malus_domestica	MD17G1265000.v1.1
prunus_persica	Prupe.3G114900_v2.0.a1 Prupe.3G115100_v2.0.a1
pyrus_communis	pycom17g26470
rosa_chinensis	RchiOBHm_Chr7g0221631 RchiOBHm_Chr7g0228891 RchiOBHm_Chr7g0228961
rosa_laevigata	RLG00000001538 RLG00000002149
rosa_multiflora	Rmu_sc0005016.1_g000036 Rmu_sc0005913.1_g000007 Rmu_sc0005913.1_g000028 Rmu_sc0027650.1_g000001
rosa_roxburghii	Rroxscaffold_3G00230820 Rroxscaffold_3G00238170
rosa_rugosa	Rorug07G0202700 Rorug07G0202700 Rorug07G0252700 Rorug07G0254200
rosa_samantha	Rh7AG343100 Rh7AG405900 Rh7BG333100 Rh7BG385400 Rh7CG360700 Rh7CG423700 Rh7DG341100
rosa_wichuraiana	Rw0G004030 Rw7G029100 Rw7G033660 Rw7G033680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	189, 303
AccB1I	GGYRCC	1 cut(s)	1891
AccBSI	CCGCTC	1 cut(s)	337
AccI	GTMKAC	2 cut(s)	189, 2201
AciI	CCGC	7 cut(s)	47, 63, 335, 408, 441, 1044, 1869
AcoI	YGGCCR	2 cut(s)	160, 561
AcsI	RAATTY	3 cut(s)	237, 1411, 2191
AcuI	CTGAAG	2 cut(s)	307, 996
AcvI	CACGTG	1 cut(s)	158
AcyI	GRCGYC	7 cut(s)	186, 291, 300, 629, 1354, 1657, 2358
AfaI	GTAC	4 cut(s)	896, 1917, 2082, 2093
AfiI	CCNNNNNNNGG	4 cut(s)	40, 294, 1500, 1747
AgsI	TTSAA	6 cut(s)	204, 844, 1395, 1793, 1865, 2033
AjnI	CCWGG	4 cut(s)	879, 1699, 1795, 2008
AjuI	GAANNNNNNNTTGG	2 cut(s)	1004, 1036
AleI	CACNNNNGTG	3 cut(s)	156, 473, 569
Alw21I	GWGCWC	4 cut(s)	748, 1350, 1804, 2073
Alw26I	GTCTC	3 cut(s)	280, 342, 2349
Alw44I	GTGCAC	2 cut(s)	1800, 2069
AoxI	GGCC	5 cut(s)	160, 309, 561, 1761, 1945
ApaLI	GTGCAC	2 cut(s)	1800, 2069
ApoI	RAATTY	3 cut(s)	237, 1411, 2191
ArsI	GACNNNNNNTTYG	2 cut(s)	2138, 2170
AspLEI	GCGC	2 cut(s)	493, 1143
AspS9I	GGNCC	3 cut(s)	310, 733, 2041
AsuC2I	CCSGG	2 cut(s)	248, 313
AsuHPI	GGTGA	7 cut(s)	17, 23, 460, 1036, 1715, 2008, 2072
AsuII	TTCGAA	1 cut(s)	1563
AvaII	GGWCC	2 cut(s)	733, 2041
AxyI	CCTNAGG	1 cut(s)	2076
BaeGI	GKGCMC	3 cut(s)	1804, 1896, 2073
BalI	TGGCCA	2 cut(s)	162, 563
BanI	GGYRCC	1 cut(s)	1891
BanII	GRGCYC	1 cut(s)	748
BauI	CACGAG	1 cut(s)	898
BbrPI	CACGTG	1 cut(s)	158
BbsI	GAAGAC	2 cut(s)	313, 2041
Bbv12I	GWGCWC	4 cut(s)	748, 1350, 1804, 2073
BccI	CCATC	6 cut(s)	128, 734, 755, 760, 1271, 1898
BceAI	ACGGC	4 cut(s)	395, 415, 601, 1932
BciT130I	CCWGG	4 cut(s)	881, 1701, 1797, 2010
BcnI	CCSGG	2 cut(s)	248, 313
BcoDI	GTCTC	3 cut(s)	280, 342, 2349
BfaI	CTAG	4 cut(s)	110, 272, 1823, 2102
BfmI	CTRYAG	2 cut(s)	71, 648
BfoI	RGCGCY	1 cut(s)	494
BglII	AGATCT	2 cut(s)	971, 1093
BlpI	GCTNAGC	1 cut(s)	338
Bme1390I	CCNGG	6 cut(s)	248, 313, 881, 1701, 1797, 2010
Bme18I	GGWCC	2 cut(s)	733, 2041
BmgT120I	GGNCC	3 cut(s)	310, 733, 2041
BmiI	GGNNCC	3 cut(s)	1893, 1909, 2257
BmrFI	CCNGG	6 cut(s)	248, 313, 881, 1701, 1797, 2010
BmsI	GCATC	2 cut(s)	826, 1444
BoxI	GACNNNNGTC	1 cut(s)	272
BpiI	GAAGAC	2 cut(s)	313, 2041
BpmI	CTGGAG	2 cut(s)	570, 1329
Bpu10I	CCTNAGC	1 cut(s)	1965
Bpu1102I	GCTNAGC	1 cut(s)	338
Bpu14I	TTCGAA	1 cut(s)	1563
BpuMI	CCSGG	2 cut(s)	248, 313
BsaAI	YACGTR	2 cut(s)	158, 894
BsaHI	GRCGYC	7 cut(s)	186, 291, 300, 629, 1354, 1657, 2358
BsaJI	CCNNGG	3 cut(s)	633, 1699, 1764
BsaXI	ACNNNNNCTCC	2 cut(s)	1344, 1374
Bsc4I	CCNNNNNNNGG	4 cut(s)	40, 294, 1500, 1747
Bse1I	ACTGG	2 cut(s)	718, 2414
Bse21I	CCTNAGG	1 cut(s)	2076
Bse3DI	GCAATG	3 cut(s)	409, 521, 554
BseBI	CCWGG	4 cut(s)	881, 1701, 1797, 2010
BseDI	CCNNGG	3 cut(s)	633, 1699, 1764
BseGI	GGATG	5 cut(s)	120, 771, 775, 889, 1238
BseLI	CCNNNNNNNGG	4 cut(s)	40, 294, 1500, 1747
BseMI	GCAATG	3 cut(s)	409, 521, 554
BseMII	CTCAG	5 cut(s)	352, 470, 1635, 2067, 2169
BseNI	ACTGG	2 cut(s)	718, 2414
BseRI	GAGGAG	2 cut(s)	518, 521
BseSI	GKGCMC	3 cut(s)	1804, 1896, 2073
BseYI	CCCAGC	2 cut(s)	66, 1896
BsgI	GTGCAG	1 cut(s)	1155
BshFI	GGCC	5 cut(s)	162, 311, 563, 1763, 1947
BshNI	GGYRCC	1 cut(s)	1891
BsiHKAI	GWGCWC	4 cut(s)	748, 1350, 1804, 2073
BsiSI	CCGG	6 cut(s)	144, 248, 288, 313, 1178, 1834
BslFI	GGGAC	2 cut(s)	311, 410
BslI	CCNNNNNNNGG	4 cut(s)	40, 294, 1500, 1747
BsmAI	GTCTC	3 cut(s)	280, 342, 2349
BsmBI	CGTCTC	1 cut(s)	2349
BsmFI	GGGAC	2 cut(s)	311, 410
BsmI	GAATGC	5 cut(s)	799, 1114, 1143, 1510, 2396
BsnI	GGCC	5 cut(s)	162, 311, 563, 1763, 1947
Bsp119I	TTCGAA	1 cut(s)	1563
Bsp1286I	GDGCHC	5 cut(s)	748, 1350, 1804, 1896, 2073
Bsp1407I	TGTACA	1 cut(s)	2091
Bsp143I	GATC	8 cut(s)	135, 180, 372, 971, 1093, 1512, 1708, 1742
Bsp1720I	GCTNAGC	1 cut(s)	338
BspACI	CCGC	7 cut(s)	47, 63, 335, 408, 441, 1044, 1869
BspANI	GGCC	5 cut(s)	162, 311, 563, 1763, 1947
BspCNI	CTCAG	5 cut(s)	351, 471, 1634, 2068, 2170
BspHI	TCATGA	1 cut(s)	832
BspLI	GGNNCC	3 cut(s)	1893, 1909, 2257
BspMAI	CTGCAG	2 cut(s)	75, 652
BspT104I	TTCGAA	1 cut(s)	1563
BspT107I	GGYRCC	1 cut(s)	1891
BsrBI	CCGCTC	1 cut(s)	337
BsrDI	GCAATG	3 cut(s)	409, 521, 554
BsrGI	TGTACA	1 cut(s)	2091
BsrI	ACTGG	2 cut(s)	718, 2414
BssECI	CCNNGG	3 cut(s)	633, 1699, 1764
BssMI	GATC	8 cut(s)	135, 180, 372, 971, 1093, 1512, 1708, 1742
BssNI	GRCGYC	7 cut(s)	186, 291, 300, 629, 1354, 1657, 2358
BssSI	CACGAG	1 cut(s)	898
BssT1I	CCWWGG	1 cut(s)	1764
Bst2BI	CACGAG	1 cut(s)	898
Bst2UI	CCWGG	4 cut(s)	881, 1701, 1797, 2010
Bst4CI	ACNGT	8 cut(s)	43, 56, 176, 355, 824, 1204, 2068, 2210
BstACI	GRCGYC	7 cut(s)	186, 291, 300, 629, 1354, 1657, 2358
BstAUI	TGTACA	1 cut(s)	2091
BstBAI	YACGTR	2 cut(s)	158, 894
BstBI	TTCGAA	1 cut(s)	1563
BstC8I	GCNNGC	8 cut(s)	309, 379, 476, 521, 561, 957, 1358, 2220
BstDEI	CTNAG	8 cut(s)	338, 479, 968, 1621, 1965, 2076, 2178, 2282
BstF5I	GGATG	5 cut(s)	120, 771, 775, 889, 1238
BstH2I	RGCGCY	1 cut(s)	494
BstHHI	GCGC	2 cut(s)	493, 1143
BstKTI	GATC	8 cut(s)	138, 183, 375, 974, 1096, 1515, 1711, 1745
BstMAI	GTCTC	3 cut(s)	280, 342, 2349
BstMBI	GATC	8 cut(s)	135, 180, 372, 971, 1093, 1512, 1708, 1742
BstNI	CCWGG	4 cut(s)	881, 1701, 1797, 2010
BstNSI	RCATGY	1 cut(s)	959
BstPAI	GACNNNNGTC	1 cut(s)	272
BstSCI	CCNGG	6 cut(s)	246, 311, 879, 1699, 1795, 2008
BstSFI	CTRYAG	2 cut(s)	71, 648
BstSLI	GKGCMC	3 cut(s)	1804, 1896, 2073
BstSNI	TACGTA	1 cut(s)	894
BstV2I	GAAGAC	2 cut(s)	313, 2041
BstX2I	RGATCY	2 cut(s)	971, 1093
BstXI	CCANNNNNNTGG	2 cut(s)	158, 1904
BstYI	RGATCY	2 cut(s)	971, 1093
Bsu36I	CCTNAGG	1 cut(s)	2076
BsuRI	GGCC	5 cut(s)	162, 311, 563, 1763, 1947
BtsCI	GGATG	5 cut(s)	120, 771, 775, 889, 1238
BtsIMutI	CAGTG	4 cut(s)	331, 351, 916, 2215
Cac8I	GCNNGC	8 cut(s)	309, 379, 476, 521, 561, 957, 1358, 2220
CciI	TCATGA	1 cut(s)	832
CfoI	GCGC	2 cut(s)	493, 1143
Cfr13I	GGNCC	3 cut(s)	310, 733, 2041
CseI	GACGC	5 cut(s)	280, 618, 1362, 1665, 2366
CsiI	ACCWGGT	2 cut(s)	1795, 2008
Csp6I	GTAC	4 cut(s)	895, 1916, 2081, 2092
CspCI	CAANNNNNGTGG	2 cut(s)	770, 805
CviQI	GTAC	4 cut(s)	895, 1916, 2081, 2092
DdeI	CTNAG	8 cut(s)	338, 479, 968, 1621, 1965, 2076, 2178, 2282
DpnI	GATC	8 cut(s)	137, 182, 374, 973, 1095, 1514, 1710, 1744
DpnII	GATC	8 cut(s)	135, 180, 372, 971, 1093, 1512, 1708, 1742
DraI	TTTAAA	1 cut(s)	1285
EaeI	YGGCCR	2 cut(s)	160, 561
Ecl136II	GAGCTC	1 cut(s)	746
Eco105I	TACGTA	1 cut(s)	894
Eco130I	CCWWGG	1 cut(s)	1764
Eco24I	GRGCYC	1 cut(s)	748
Eco47I	GGWCC	2 cut(s)	733, 2041
Eco53kI	GAGCTC	1 cut(s)	746
Eco57I	CTGAAG	2 cut(s)	307, 996
Eco72I	CACGTG	1 cut(s)	158
Eco81I	CCTNAGG	1 cut(s)	2076
EcoICRI	GAGCTC	1 cut(s)	746
EcoO109I	RGGNCCY	1 cut(s)	733
EcoRI	GAATTC	1 cut(s)	2191
EcoRII	CCWGG	4 cut(s)	879, 1699, 1795, 2008
EcoT14I	CCWWGG	1 cut(s)	1764
EcoT22I	ATGCAT	5 cut(s)	864, 1021, 1303, 1680, 2311
EcoT38I	GRGCYC	1 cut(s)	748
ErhI	CCWWGG	1 cut(s)	1764
Esp3I	CGTCTC	1 cut(s)	2349
FaqI	GGGAC	2 cut(s)	311, 410
FblI	GTMKAC	2 cut(s)	189, 2201
FokI	GGATG	5 cut(s)	107, 778, 782, 896, 1245
FriOI	GRGCYC	1 cut(s)	748
FspBI	CTAG	4 cut(s)	110, 272, 1823, 2102
GlaI	GCGC	2 cut(s)	492, 1142
GsaI	CCCAGC	2 cut(s)	70, 1900
GsuI	CTGGAG	2 cut(s)	570, 1329
HaeII	RGCGCY	1 cut(s)	494
HaeIII	GGCC	5 cut(s)	162, 311, 563, 1763, 1947
HapII	CCGG	6 cut(s)	144, 248, 288, 313, 1178, 1834
HgaI	GACGC	5 cut(s)	280, 618, 1362, 1665, 2366
HhaI	GCGC	2 cut(s)	493, 1143
Hin1I	GRCGYC	7 cut(s)	186, 291, 300, 629, 1354, 1657, 2358
Hin6I	GCGC	2 cut(s)	491, 1141
HinP1I	GCGC	2 cut(s)	491, 1141
HincII	GTYRAC	1 cut(s)	1755
HindII	GTYRAC	1 cut(s)	1755
HindIII	AAGCTT	2 cut(s)	2216, 2243
HpaII	CCGG	6 cut(s)	144, 248, 288, 313, 1178, 1834
HphI	GGTGA	7 cut(s)	17, 23, 460, 1036, 1715, 2008, 2072
Hpy188I	TCNGA	5 cut(s)	976, 1091, 1409, 2179, 2267
Hpy188III	TCNNGA	9 cut(s)	425, 549, 833, 992, 1148, 2102, 2144, 2325, 2350
Hpy99I	CGWCG	4 cut(s)	188, 260, 296, 706
HpyAV	CCTTC	3 cut(s)	475, 652, 1646
HpyCH4III	ACNGT	8 cut(s)	43, 56, 176, 355, 824, 1204, 2068, 2210
HpyCH4IV	ACGT	6 cut(s)	157, 186, 300, 893, 1196, 1319
HpyF3I	CTNAG	8 cut(s)	338, 479, 968, 1621, 1965, 2076, 2178, 2282
HpySE526I	ACGT	6 cut(s)	157, 186, 300, 893, 1196, 1319
Hsp92I	GRCGYC	7 cut(s)	186, 291, 300, 629, 1354, 1657, 2358
HspAI	GCGC	2 cut(s)	491, 1141
Kzo9I	GATC	8 cut(s)	135, 180, 372, 971, 1093, 1512, 1708, 1742
LmnI	GCTCC	7 cut(s)	551, 743, 1310, 1345, 1365, 1987, 2255
LweI	GCATC	2 cut(s)	826, 1444
MabI	ACCWGGT	2 cut(s)	1795, 2008
MaeI	CTAG	4 cut(s)	110, 272, 1823, 2102
MaeII	ACGT	6 cut(s)	157, 186, 300, 893, 1196, 1319
MaeIII	GTNAC	4 cut(s)	56, 301, 425, 1024
MalI	GATC	8 cut(s)	137, 182, 374, 973, 1095, 1514, 1710, 1744
MbiI	CCGCTC	1 cut(s)	337
MboI	GATC	8 cut(s)	135, 180, 372, 971, 1093, 1512, 1708, 1742
MboII	GAAGA	9 cut(s)	192, 200, 313, 603, 1253, 1592, 1718, 2011, 2041
MfeI	CAATTG	1 cut(s)	537
MflI	RGATCY	2 cut(s)	971, 1093
MhlI	GDGCHC	5 cut(s)	748, 1350, 1804, 1896, 2073
MlsI	TGGCCA	2 cut(s)	162, 563
MluCI	AATT	9 cut(s)	237, 537, 776, 845, 1050, 1411, 1692, 2191, 2404
MluNI	TGGCCA	2 cut(s)	162, 563
MlyI	GAGTC	7 cut(s)	262, 327, 982, 1676, 1831, 1872, 2183
MmeI	TCCRAC	3 cut(s)	1387, 1554, 2000
Mox20I	TGGCCA	2 cut(s)	162, 563
Mph1103I	ATGCAT	5 cut(s)	864, 1021, 1303, 1680, 2311
MscI	TGGCCA	2 cut(s)	162, 563
MslI	CAYNNNNRTG	5 cut(s)	156, 473, 569, 1536, 1807
Msp20I	TGGCCA	2 cut(s)	162, 563
MspA1I	CMGCKG	4 cut(s)	70, 526, 754, 952
MspI	CCGG	6 cut(s)	144, 248, 288, 313, 1178, 1834
MspR9I	CCNGG	6 cut(s)	248, 313, 881, 1701, 1797, 2010
MunI	CAATTG	1 cut(s)	537
Mva1269I	GAATGC	5 cut(s)	799, 1114, 1143, 1510, 2396
MvaI	CCWGG	4 cut(s)	881, 1701, 1797, 2010
NciI	CCSGG	2 cut(s)	248, 313
NdeII	GATC	8 cut(s)	135, 180, 372, 971, 1093, 1512, 1708, 1742
NlaIV	GGNNCC	3 cut(s)	1893, 1909, 2257
NmeAIII	GCCGAG	2 cut(s)	257, 727
NmuCI	GTSAC	3 cut(s)	301, 425, 1024
NsiI	ATGCAT	5 cut(s)	864, 1021, 1303, 1680, 2311
NspI	RCATGY	1 cut(s)	959
NspV	TTCGAA	1 cut(s)	1563
OliI	CACNNNNGTG	3 cut(s)	156, 473, 569
PaeI	GCATGC	1 cut(s)	959
PagI	TCATGA	1 cut(s)	832
PcsI	WCGNNNNNNNCGW	2 cut(s)	701, 1430
PctI	GAATGC	5 cut(s)	799, 1114, 1143, 1510, 2396
PfeI	GAWTC	4 cut(s)	874, 1391, 1490, 2278
PflFI	GACNNNGTC	1 cut(s)	254
PleI	GAGTC	7 cut(s)	262, 326, 982, 1676, 1831, 1872, 2182
PmaCI	CACGTG	1 cut(s)	158
PmlI	CACGTG	1 cut(s)	158
PpsI	GAGTC	7 cut(s)	262, 326, 982, 1676, 1831, 1872, 2182
Ppu21I	YACGTR	2 cut(s)	158, 894
PpuMI	RGGWCCY	1 cut(s)	733
PshAI	GACNNNNGTC	1 cut(s)	272
Psp124BI	GAGCTC	1 cut(s)	748
Psp5II	RGGWCCY	1 cut(s)	733
Psp6I	CCWGG	4 cut(s)	879, 1699, 1795, 2008
PspCI	CACGTG	1 cut(s)	158
PspFI	CCCAGC	2 cut(s)	66, 1896
PspGI	CCWGG	4 cut(s)	879, 1699, 1795, 2008
PspN4I	GGNNCC	3 cut(s)	1893, 1909, 2257
PspPI	GGNCC	3 cut(s)	310, 733, 2041
PspPPI	RGGWCCY	1 cut(s)	733
PstI	CTGCAG	2 cut(s)	75, 652
PsuI	RGATCY	2 cut(s)	971, 1093
PsyI	GACNNNGTC	1 cut(s)	254
PvuII	CAGCTG	4 cut(s)	70, 526, 754, 952
RsaI	GTAC	4 cut(s)	896, 1917, 2082, 2093
RsaNI	GTAC	4 cut(s)	895, 1916, 2081, 2092
RseI	CAYNNNNRTG	5 cut(s)	156, 473, 569, 1536, 1807
SacI	GAGCTC	1 cut(s)	748
Sau3AI	GATC	8 cut(s)	135, 180, 372, 971, 1093, 1512, 1708, 1742
Sau96I	GGNCC	3 cut(s)	310, 733, 2041
SchI	GAGTC	7 cut(s)	262, 327, 982, 1676, 1831, 1872, 2183
ScrFI	CCNGG	6 cut(s)	248, 313, 881, 1701, 1797, 2010
SduI	GDGCHC	5 cut(s)	748, 1350, 1804, 1896, 2073
SexAI	ACCWGGT	2 cut(s)	1795, 2008
SfaNI	GCATC	2 cut(s)	826, 1444
SfcI	CTRYAG	2 cut(s)	71, 648
SfuI	TTCGAA	1 cut(s)	1563
SinI	GGWCC	2 cut(s)	733, 2041
SmiMI	CAYNNNNRTG	5 cut(s)	156, 473, 569, 1536, 1807
SnaBI	TACGTA	1 cut(s)	894
SphI	GCATGC	1 cut(s)	959
Sse9I	AATT	9 cut(s)	237, 537, 776, 845, 1050, 1411, 1692, 2191, 2404
SsiI	CCGC	7 cut(s)	47, 63, 335, 408, 441, 1044, 1869
SspMI	CTAG	4 cut(s)	110, 272, 1823, 2102
SstI	GAGCTC	1 cut(s)	748
StyD4I	CCNGG	6 cut(s)	246, 311, 879, 1699, 1795, 2008
StyI	CCWWGG	1 cut(s)	1764
TaaI	ACNGT	8 cut(s)	43, 56, 176, 355, 824, 1204, 2068, 2210
TaiI	ACGT	6 cut(s)	160, 189, 303, 896, 1199, 1322
TaqI	TCGA	3 cut(s)	183, 231, 1563
TasI	AATT	9 cut(s)	237, 537, 776, 845, 1050, 1411, 1692, 2191, 2404
TatI	WGTACW	2 cut(s)	1915, 2091
TauI	GCSGC	4 cut(s)	50, 65, 410, 1871
TfiI	GAWTC	4 cut(s)	874, 1391, 1490, 2278
TscAI	CASTG	4 cut(s)	331, 358, 916, 2215
TseFI	GTSAC	3 cut(s)	301, 425, 1024
Tsp45I	GTSAC	3 cut(s)	301, 425, 1024
TspDTI	ATGAA	7 cut(s)	684, 786, 849, 1071, 1265, 2255, 2360
TspGWI	ACGGA	2 cut(s)	1365, 1483
TspRI	CASTG	4 cut(s)	331, 358, 916, 2215
Tth111I	GACNNNGTC	1 cut(s)	254
VneI	GTGCAC	2 cut(s)	1800, 2069
VpaK11BI	GGWCC	2 cut(s)	733, 2041
XapI	RAATTY	3 cut(s)	237, 1411, 2191
XbaI	TCTAGA	1 cut(s)	2101
XceI	RCATGY	1 cut(s)	959
XmiI	GTMKAC	2 cut(s)	189, 2201
XspI	CTAG	4 cut(s)	110, 272, 1823, 2102
ZraI	GACGTC	2 cut(s)	187, 301
Zsp2I	ATGCAT	5 cut(s)	864, 1021, 1303, 1680, 2311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.