Rw7G033680

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0004093
Physical Location & Seq
Forward (+)
49687800 .. 49690086
2287 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G033680.1

Sequence Viewer

Length: 2058 bp
ATGATCGCTTCCGGCTTCCACCCACGTGGCCATATCCTCAACCGTTTGATCGACGTCTACTGTAAATCTTCAAATCTTCGCTACGCACTCCACCTGTTCGACGAAATTCCCAATCCGGACATCGTGGCCAGAACAACTCTGGTTTCGGCGTATTCCGGCGTCGGGGATGTCACGCTGGCCCGGAGAGTGTTCAGTGAAACTCCATTAAGCATGAGAGACACTGTCAGCTACAATGCCATGATCGCAGGCTACTCTCATAACAGGGACGGCAATGCCGCCGTTGAGCTGTTTCGTGACATGAGGCGAGGCGGTTTTCGGCCCGATGAGTTTACCTTCACCAGTGTGCTGAGTGGTCTGGCGCTTATAGTGGAGGAGGAGAAGCAATGCCAGCAGCTGCATTGTGCAATTGTTAAGTCCGGAGCATTGCTGGCAACTTCGGTGTCGAATGCTTTGGTGTCTGTGTATGTTAAGTGTGCTTCTTCGCCGTTGGTGTCTTCATCGTCGGTGGTGGTGGCTGAAGCGAGGAAGGTGTTTGATGAAATGCCAAAGAGAGATGAGCTGTCGTGGACGACGATGATTACTGGCTATGTGAGGAATGAGGACCTTGATGGAGCTCGGCAGCTGCTTGATGGGATGGATGAAAAATTGGAAGTGGCATGGAATGCGATGATTTCTGGTTACGTGCATCATGGTTTTTGTGATGAAGCATTGAAGTTGTGCGGTAAAATTGATGAAGCACGATATATTTTTAATAATATGTCCGTCAGAGATCTTGTTTCTTGGAATGCAATATTGTCAGGGTATGTGAGTGGAGGGCGCATCCAGGAAGCAAAATCCTTTTTTGAGGAAATGCCGGAAAGGAGTGGTCTAACTTGGACTGTAATAATATCAGGTTTAGCTCAAAATGGATGTGGGGAAGAAGCTATGAAGCTATTTAACCAAATGAGACTTGATGGTTTTAAACCCTGTGATTATGCATTTGCTGGAGCTATTACGTCTTGTGCTGCTCTGGGGGCGTTGGAGCATGGACGCCAGCTCCATGCTCAACTAATATGCTTGGGGCATGATTCAAGCCTTTCAGTTGGAAATTCACTTATCACAATGTATGCCAGATGTGGGGTTGTAGACGATGCTGACTGTGTGTTCCTTACAATGCCTTATATTGATTCCGTGTCGTGGAATGCTATGTTCGCGGCTCTGGCACAACATGGATATGGTGTCCAAGCAATAAGACTTTTCAAACAGATGTTGGGGGAAGATATAATGCCAGATAGAATAACTTTCCTCACTATTCTGTCAGCTTGTAGTCATGCTGGTTTAGTTAAAGAAGGACGCCAATATTTTCGTTTAATGCATGACTCTTATGGTATTGCCCCTGGTGAAGACCATTATGCTCGTATGATTGATTTGTTGTGCCGATCTGGGGAGTTGACAGAGGCCAAGGACTTAATCAAATCAATGCCTTTTGAACCAGGTGCACCAATTTGGGAGGCTATTCTAGCTGGTTGCCGGACTCATGGGAATATGGATTTAGGTATTCAAGCTGCAGAACGACTCTTTGAGCTGGTGCCCCAGCATGATGGAACCTATGTACTTTTGTCGAACTTGTATGCTGCTTTAGGCCGTTGGGATAATGTGGCTAAGGTGCGAAAACTAATGAGGGAGCGAGGGGTTAAGAAAGAACCTGGTTGTAGTTGGATTGACGTTGAAAATATGGTCCATGTCTTCTTGGTGTACAAGTATCTAGAGCAACTAATTCTTAAAATGAGGAAGTTAGAATATGTTCCTGACACAAAGTTTGCGTTGCATGATATGGAGTCTGAGCATAAAGAGAATTCCTTGTCTACTCACAGTGAGAAGCTTGCAGTTGCATTTGGGATCATGAAGCTTCCACTTGGAGCCACGATCAGAGTTTTTAAGAATCTTAGGATCTGTGGGGATTGCCATAACGCATTTAAGTTTATGTCAAGAGTGGTTGGGAGAGAGATAGATGTGAGAGACGCCAAGAGGTTTCATCATTTTAGGAACGGCGAATGCTCTTGTGGAAATTACTGGTAG

Protein Analysis

685

Amino Acids

76.52

Weight (kDa)

6.3

Isoelectric Point (pI)

33.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 72 - 120 2.1e-15 PPR repeat family
PPR PF01535 75 - 105 5e-07 PPR repeat
PPR PF01535 218 - 244 6.4e-06 PPR repeat
PPR_2 PF13041 257 - 287 9.8e-06 PPR repeat family
PPR PF01535 259 - 287 1.4e-06 PPR repeat
PPR PF01535 291 - 320 7.3e-08 PPR repeat
PPR_2 PF13041 291 - 334 4.3e-07 PPR repeat family
PPR_2 PF13041 389 - 436 5.2e-09 PPR repeat family
E_motif PF20431 506 - 568 2.3e-22 E motif
DYW_deaminase PF14432 594 - 685 1.1e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 57
AccB1I GGYRCC 1 cut(s) 1567
AccI GTMKAC 3 cut(s) 57, 1125, 1844
AccII CGCG 1 cut(s) 1193
AccIII TCCGGA 2 cut(s) 115, 416
AciI CCGC 4 cut(s) 276, 309, 720, 1193
AclWI GGATC 2 cut(s) 1886, 1937
AcoI YGGCCR 2 cut(s) 28, 126
AcsI RAATTY 3 cut(s) 105, 1087, 1834
AcuI CTGAAG 1 cut(s) 537
AcvI CACGTG 1 cut(s) 26
AcyI GRCGYC 5 cut(s) 54, 159, 1030, 1333, 2001
AfaI GTAC 2 cut(s) 1593, 1736
AfiI CCNNNNNNNGG 4 cut(s) 162, 1116, 1176, 1423
AgsI TTSAA 7 cut(s) 72, 712, 1071, 1240, 1469, 1541, 1709
AjnI CCWGG 4 cut(s) 822, 1375, 1471, 1684
AleI CACNNNNGTG 2 cut(s) 24, 341
Alw21I GWGCWC 2 cut(s) 616, 1480
Alw26I GTCTC 3 cut(s) 210, 940, 1992
Alw44I GTGCAC 1 cut(s) 1476
AlwI GGATC 2 cut(s) 1886, 1937
AlwNI CAGNNNCTG 1 cut(s) 394
Aor13HI TCCGGA 2 cut(s) 115, 416
AoxI GGCC 6 cut(s) 28, 126, 177, 317, 1437, 1621
ApaLI GTGCAC 1 cut(s) 1476
ApeKI GCWGC 7 cut(s) 391, 394, 619, 622, 1004, 1544, 1613
ApoI RAATTY 3 cut(s) 105, 1087, 1834
ArsI GACNNNNNNTTYG 2 cut(s) 1781, 1813
Asp700I GAANNNNTTC 1 cut(s) 1782
AspLEI GCGC 2 cut(s) 361, 819
AspS9I GGNCC 4 cut(s) 178, 318, 601, 1717
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 2 cut(s) 328, 1391
AvaII GGWCC 2 cut(s) 601, 1717
BaeGI GKGCMC 2 cut(s) 1480, 1572
BalI TGGCCA 2 cut(s) 30, 128
BanI GGYRCC 1 cut(s) 1567
BanII GRGCYC 1 cut(s) 616
BbrPI CACGTG 1 cut(s) 26
BbsI GAAGAC 3 cut(s) 486, 1389, 1717
Bbv12I GWGCWC 2 cut(s) 616, 1480
BbvI GCAGC 7 cut(s) 381, 403, 609, 631, 991, 1531, 1600
BccI CCATC 5 cut(s) 602, 623, 628, 947, 1574
BceAI ACGGC 5 cut(s) 263, 283, 469, 1608, 2044
BciT130I CCWGG 4 cut(s) 824, 1377, 1473, 1686
BcnI CCSGG 1 cut(s) 181
BcoDI GTCTC 3 cut(s) 210, 940, 1992
BfaI CTAG 2 cut(s) 1499, 1745
BfmI CTRYAG 1 cut(s) 1545
BfoI RGCGCY 1 cut(s) 362
BglII AGATCT 1 cut(s) 769
BisI GCNGC 9 cut(s) 276, 392, 395, 620, 623, 1005, 1194, 1545, 1614
BlsI GCNGC 9 cut(s) 277, 393, 396, 621, 624, 1006, 1195, 1546, 1615
Bme1390I CCNGG 5 cut(s) 181, 824, 1377, 1473, 1686
Bme18I GGWCC 2 cut(s) 601, 1717
BmgT120I GGNCC 4 cut(s) 178, 318, 601, 1717
BmiI GGNNCC 3 cut(s) 1569, 1585, 1900
BmrFI CCNGG 5 cut(s) 181, 824, 1377, 1473, 1686
BmsI GCATC 3 cut(s) 694, 828, 1120
BpiI GAAGAC 3 cut(s) 486, 1389, 1717
BpmI CTGGAG 1 cut(s) 1005
Bpu10I CCTNAGC 1 cut(s) 1641
BpuMI CCSGG 1 cut(s) 181
BsaAI YACGTR 2 cut(s) 26, 682
BsaHI GRCGYC 5 cut(s) 54, 159, 1030, 1333, 2001
BsaJI CCNNGG 2 cut(s) 1375, 1440
BsaWI WCCGGW 2 cut(s) 115, 416
BsaXI ACNNNNNCTCC 2 cut(s) 1020, 1050
Bsc4I CCNNNNNNNGG 4 cut(s) 162, 1116, 1176, 1423
Bse1I ACTGG 3 cut(s) 339, 586, 2057
Bse3DI GCAATG 3 cut(s) 277, 389, 422
BseAI TCCGGA 2 cut(s) 115, 416
BseBI CCWGG 4 cut(s) 824, 1377, 1473, 1686
BseDI CCNNGG 2 cut(s) 1375, 1440
BseGI GGATG 5 cut(s) 172, 639, 643, 819, 914
BseLI CCNNNNNNNGG 4 cut(s) 162, 1116, 1176, 1423
BseMI GCAATG 3 cut(s) 277, 389, 422
BseMII CTCAG 2 cut(s) 338, 1812
BseNI ACTGG 3 cut(s) 339, 586, 2057
BseRI GAGGAG 2 cut(s) 386, 389
BseSI GKGCMC 2 cut(s) 1480, 1572
BseXI GCAGC 7 cut(s) 381, 403, 609, 631, 991, 1531, 1600
BseYI CCCAGC 1 cut(s) 1572
Bsh1236I CGCG 1 cut(s) 1193
BshFI GGCC 6 cut(s) 30, 128, 179, 319, 1439, 1623
BshNI GGYRCC 1 cut(s) 1567
BsiHKAI GWGCWC 2 cut(s) 616, 1480
BsiSI CCGG 7 cut(s) 12, 116, 156, 181, 417, 854, 1510
BslFI GGGAC 1 cut(s) 278
BslI CCNNNNNNNGG 4 cut(s) 162, 1116, 1176, 1423
BsmAI GTCTC 3 cut(s) 210, 940, 1992
BsmBI CGTCTC 1 cut(s) 1992
BsmFI GGGAC 1 cut(s) 278
BsmI GAATGC 5 cut(s) 451, 667, 790, 1186, 2039
BsnI GGCC 6 cut(s) 30, 128, 179, 319, 1439, 1623
Bsp1286I GDGCHC 3 cut(s) 616, 1480, 1572
Bsp13I TCCGGA 2 cut(s) 115, 416
Bsp1407I TGTACA 1 cut(s) 1734
Bsp143I GATC 8 cut(s) 3, 48, 240, 769, 1418, 1878, 1905, 1929
BspACI CCGC 4 cut(s) 276, 309, 720, 1193
BspANI GGCC 6 cut(s) 30, 128, 179, 319, 1439, 1623
BspCNI CTCAG 2 cut(s) 339, 1813
BspEI TCCGGA 2 cut(s) 115, 416
BspFNI CGCG 1 cut(s) 1193
BspHI TCATGA 1 cut(s) 1881
BspLI GGNNCC 3 cut(s) 1569, 1585, 1900
BspMAI CTGCAG 1 cut(s) 1549
BspPI GGATC 2 cut(s) 1886, 1937
BspT107I GGYRCC 1 cut(s) 1567
BsrDI GCAATG 3 cut(s) 277, 389, 422
BsrGI TGTACA 1 cut(s) 1734
BsrI ACTGG 3 cut(s) 339, 586, 2057
BssECI CCNNGG 2 cut(s) 1375, 1440
BssMI GATC 8 cut(s) 3, 48, 240, 769, 1418, 1878, 1905, 1929
BssNI GRCGYC 5 cut(s) 54, 159, 1030, 1333, 2001
BssT1I CCWWGG 1 cut(s) 1440
Bst2UI CCWGG 4 cut(s) 824, 1377, 1473, 1686
Bst4CI ACNGT 6 cut(s) 44, 62, 223, 880, 1139, 1853
BstACI GRCGYC 5 cut(s) 54, 159, 1030, 1333, 2001
BstAPI GCANNNNNTGC 1 cut(s) 662
BstAUI TGTACA 1 cut(s) 1734
BstBAI YACGTR 2 cut(s) 26, 682
BstC8I GCNNGC 6 cut(s) 177, 247, 389, 429, 1034, 1863
BstDEI CTNAG 4 cut(s) 347, 1641, 1821, 1925
BstF5I GGATG 5 cut(s) 172, 639, 643, 819, 914
BstFNI CGCG 1 cut(s) 1193
BstH2I RGCGCY 1 cut(s) 362
BstHHI GCGC 2 cut(s) 361, 819
BstKTI GATC 8 cut(s) 6, 51, 243, 772, 1421, 1881, 1908, 1932
BstMAI GTCTC 3 cut(s) 210, 940, 1992
BstMBI GATC 8 cut(s) 3, 48, 240, 769, 1418, 1878, 1905, 1929
BstMWI GCNNNNNNNGC 8 cut(s) 242, 388, 428, 662, 1013, 1190, 1199, 1499
BstNI CCWGG 4 cut(s) 824, 1377, 1473, 1686
BstSCI CCNGG 5 cut(s) 179, 822, 1375, 1471, 1684
BstSFI CTRYAG 1 cut(s) 1545
BstSLI GKGCMC 2 cut(s) 1480, 1572
BstUI CGCG 1 cut(s) 1193
BstV1I GCAGC 7 cut(s) 381, 403, 609, 631, 991, 1531, 1600
BstV2I GAAGAC 3 cut(s) 486, 1389, 1717
BstX2I RGATCY 2 cut(s) 769, 1929
BstXI CCANNNNNNTGG 2 cut(s) 26, 1580
BstYI RGATCY 2 cut(s) 769, 1929
BsuRI GGCC 6 cut(s) 30, 128, 179, 319, 1439, 1623
BtgZI GCGATG 1 cut(s) 680
BtsCI GGATG 5 cut(s) 172, 639, 643, 819, 914
BtsIMutI CAGTG 4 cut(s) 199, 219, 346, 1858
Cac8I GCNNGC 6 cut(s) 177, 247, 389, 429, 1034, 1863
CaiI CAGNNNCTG 1 cut(s) 394
CciI TCATGA 1 cut(s) 1881
CfoI GCGC 2 cut(s) 361, 819
Cfr13I GGNCC 4 cut(s) 178, 318, 601, 1717
CseI GACGC 4 cut(s) 148, 1038, 1341, 2009
CsiI ACCWGGT 2 cut(s) 1471, 1684
Csp6I GTAC 2 cut(s) 1592, 1735
CviQI GTAC 2 cut(s) 1592, 1735
DdeI CTNAG 4 cut(s) 347, 1641, 1821, 1925
DpnI GATC 8 cut(s) 5, 50, 242, 771, 1420, 1880, 1907, 1931
DpnII GATC 8 cut(s) 3, 48, 240, 769, 1418, 1878, 1905, 1929
DraI TTTAAA 1 cut(s) 961
EaeI YGGCCR 2 cut(s) 28, 126
Ecl136II GAGCTC 1 cut(s) 614
Eco130I CCWWGG 1 cut(s) 1440
Eco24I GRGCYC 1 cut(s) 616
Eco47I GGWCC 2 cut(s) 601, 1717
Eco53kI GAGCTC 1 cut(s) 614
Eco57I CTGAAG 1 cut(s) 537
Eco72I CACGTG 1 cut(s) 26
EcoICRI GAGCTC 1 cut(s) 614
EcoO109I RGGNCCY 1 cut(s) 601
EcoRI GAATTC 1 cut(s) 1834
EcoRII CCWGG 4 cut(s) 822, 1375, 1471, 1684
EcoT14I CCWWGG 1 cut(s) 1440
EcoT22I ATGCAT 2 cut(s) 979, 1356
EcoT38I GRGCYC 1 cut(s) 616
ErhI CCWWGG 1 cut(s) 1440
Esp3I CGTCTC 1 cut(s) 1992
FaqI GGGAC 1 cut(s) 278
FblI GTMKAC 3 cut(s) 57, 1125, 1844
Fnu4HI GCNGC 9 cut(s) 276, 392, 395, 620, 623, 1005, 1194, 1545, 1614
FokI GGATG 5 cut(s) 179, 646, 650, 806, 921
FriOI GRGCYC 1 cut(s) 616
Fsp4HI GCNGC 9 cut(s) 276, 392, 395, 620, 623, 1005, 1194, 1545, 1614
FspBI CTAG 2 cut(s) 1499, 1745
GlaI GCGC 2 cut(s) 360, 818
GluI GCNGC 9 cut(s) 276, 392, 395, 620, 623, 1005, 1194, 1545, 1614
GsaI CCCAGC 1 cut(s) 1576
GsuI CTGGAG 1 cut(s) 1005
HaeII RGCGCY 1 cut(s) 362
HaeIII GGCC 6 cut(s) 30, 128, 179, 319, 1439, 1623
HapII CCGG 7 cut(s) 12, 116, 156, 181, 417, 854, 1510
HgaI GACGC 4 cut(s) 148, 1038, 1341, 2009
HhaI GCGC 2 cut(s) 361, 819
Hin1I GRCGYC 5 cut(s) 54, 159, 1030, 1333, 2001
Hin6I GCGC 2 cut(s) 359, 817
HinP1I GCGC 2 cut(s) 359, 817
HincII GTYRAC 1 cut(s) 1431
HindII GTYRAC 1 cut(s) 1431
HindIII AAGCTT 2 cut(s) 1859, 1886
HinfI GANTC 7 cut(s) 1067, 1166, 1358, 1513, 1554, 1817, 1921
HpaII CCGG 7 cut(s) 12, 116, 156, 181, 417, 854, 1510
HphI GGTGA 2 cut(s) 328, 1391
Hpy166II GTNNAC 8 cut(s) 58, 330, 567, 1126, 1431, 1478, 1735, 1845
Hpy188I TCNGA 3 cut(s) 767, 1822, 1910
Hpy188III TCNNGA 7 cut(s) 116, 293, 417, 1745, 1787, 1882, 1968
Hpy8I GTNNAC 8 cut(s) 58, 330, 567, 1126, 1431, 1478, 1735, 1845
Hpy99I CGWCG 5 cut(s) 56, 104, 164, 505, 574
HpyAV CCTTC 3 cut(s) 343, 520, 1322
HpyCH4III ACNGT 6 cut(s) 44, 62, 223, 880, 1139, 1853
HpyCH4IV ACGT 5 cut(s) 25, 54, 681, 995, 1704
HpyF10VI GCNNNNNNNGC 8 cut(s) 242, 388, 428, 662, 1013, 1190, 1199, 1499
HpyF3I CTNAG 4 cut(s) 347, 1641, 1821, 1925
HpySE526I ACGT 5 cut(s) 25, 54, 681, 995, 1704
Hsp92I GRCGYC 5 cut(s) 54, 159, 1030, 1333, 2001
HspAI GCGC 2 cut(s) 359, 817
Kpn2I TCCGGA 2 cut(s) 115, 416
Kzo9I GATC 8 cut(s) 3, 48, 240, 769, 1418, 1878, 1905, 1929
LmnI GCTCC 7 cut(s) 419, 611, 986, 1021, 1041, 1663, 1898
Lsp1109I GCAGC 7 cut(s) 381, 403, 609, 631, 991, 1531, 1600
LweI GCATC 3 cut(s) 694, 828, 1120
MabI ACCWGGT 2 cut(s) 1471, 1684
MaeI CTAG 2 cut(s) 1499, 1745
MaeII ACGT 5 cut(s) 25, 54, 681, 995, 1704
MaeIII GTNAC 3 cut(s) 169, 293, 677
MalI GATC 8 cut(s) 5, 50, 242, 771, 1420, 1880, 1907, 1931
MboI GATC 8 cut(s) 3, 48, 240, 769, 1418, 1878, 1905, 1929
MboII GAAGA 8 cut(s) 60, 68, 471, 486, 929, 1268, 1394, 1717
MfeI CAATTG 1 cut(s) 405
MflI RGATCY 2 cut(s) 769, 1929
MhlI GDGCHC 3 cut(s) 616, 1480, 1572
MlsI TGGCCA 2 cut(s) 30, 128
MluCI AATT 9 cut(s) 105, 405, 644, 726, 1087, 1482, 1755, 1834, 2047
MluNI TGGCCA 2 cut(s) 30, 128
MlyI GAGTC 4 cut(s) 1352, 1507, 1548, 1826
MmeI TCCRAC 3 cut(s) 999, 1063, 1676
Mox20I TGGCCA 2 cut(s) 30, 128
Mph1103I ATGCAT 2 cut(s) 979, 1356
MroI TCCGGA 2 cut(s) 115, 416
MroXI GAANNNNTTC 1 cut(s) 1782
MscI TGGCCA 2 cut(s) 30, 128
MslI CAYNNNNRTG 3 cut(s) 24, 341, 1212
Msp20I TGGCCA 2 cut(s) 30, 128
MspA1I CMGCKG 2 cut(s) 394, 622
MspI CCGG 7 cut(s) 12, 116, 156, 181, 417, 854, 1510
MspR9I CCNGG 5 cut(s) 181, 824, 1377, 1473, 1686
MunI CAATTG 1 cut(s) 405
Mva1269I GAATGC 5 cut(s) 451, 667, 790, 1186, 2039
MvaI CCWGG 4 cut(s) 824, 1377, 1473, 1686
MvnI CGCG 1 cut(s) 1193
MwoI GCNNNNNNNGC 8 cut(s) 242, 388, 428, 662, 1013, 1190, 1199, 1499
NciI CCSGG 1 cut(s) 181
NdeII GATC 8 cut(s) 3, 48, 240, 769, 1418, 1878, 1905, 1929
NlaIV GGNNCC 3 cut(s) 1569, 1585, 1900
NmeAIII GCCGAG 1 cut(s) 595
NmuCI GTSAC 2 cut(s) 169, 293
NsiI ATGCAT 2 cut(s) 979, 1356
OliI CACNNNNGTG 2 cut(s) 24, 341
PagI TCATGA 1 cut(s) 1881
PcsI WCGNNNNNNNCGW 1 cut(s) 569
PctI GAATGC 5 cut(s) 451, 667, 790, 1186, 2039
PdmI GAANNNNTTC 1 cut(s) 1782
PfeI GAWTC 3 cut(s) 1067, 1166, 1921
PflFI GACNNNGTC 1 cut(s) 221
PfoI TCCNGGA 1 cut(s) 822
PkrI GCNGC 9 cut(s) 277, 393, 396, 621, 624, 1006, 1195, 1546, 1615
PleI GAGTC 4 cut(s) 1352, 1507, 1548, 1825
PmaCI CACGTG 1 cut(s) 26
PmlI CACGTG 1 cut(s) 26
PpsI GAGTC 4 cut(s) 1352, 1507, 1548, 1825
Ppu21I YACGTR 2 cut(s) 26, 682
PpuMI RGGWCCY 1 cut(s) 601
Psp124BI GAGCTC 1 cut(s) 616
Psp5II RGGWCCY 1 cut(s) 601
Psp6I CCWGG 4 cut(s) 822, 1375, 1471, 1684
PspCI CACGTG 1 cut(s) 26
PspFI CCCAGC 1 cut(s) 1572
PspGI CCWGG 4 cut(s) 822, 1375, 1471, 1684
PspN4I GGNNCC 3 cut(s) 1569, 1585, 1900
PspPI GGNCC 4 cut(s) 178, 318, 601, 1717
PspPPI RGGWCCY 1 cut(s) 601
PstI CTGCAG 1 cut(s) 1549
PstNI CAGNNNCTG 1 cut(s) 394
PsuI RGATCY 2 cut(s) 769, 1929
PsyI GACNNNGTC 1 cut(s) 221
PvuII CAGCTG 2 cut(s) 394, 622
RsaI GTAC 2 cut(s) 1593, 1736
RsaNI GTAC 2 cut(s) 1592, 1735
RseI CAYNNNNRTG 3 cut(s) 24, 341, 1212
SacI GAGCTC 1 cut(s) 616
SatI GCNGC 9 cut(s) 276, 392, 395, 620, 623, 1005, 1194, 1545, 1614
Sau3AI GATC 8 cut(s) 3, 48, 240, 769, 1418, 1878, 1905, 1929
Sau96I GGNCC 4 cut(s) 178, 318, 601, 1717
SchI GAGTC 4 cut(s) 1352, 1507, 1548, 1826
ScrFI CCNGG 5 cut(s) 181, 824, 1377, 1473, 1686
SduI GDGCHC 3 cut(s) 616, 1480, 1572
SexAI ACCWGGT 2 cut(s) 1471, 1684
SfaNI GCATC 3 cut(s) 694, 828, 1120
SfcI CTRYAG 1 cut(s) 1545
SinI GGWCC 2 cut(s) 601, 1717
SmiMI CAYNNNNRTG 3 cut(s) 24, 341, 1212
Sse9I AATT 9 cut(s) 105, 405, 644, 726, 1087, 1482, 1755, 1834, 2047
SsiI CCGC 4 cut(s) 276, 309, 720, 1193
SspI AATATT 2 cut(s) 792, 1340
SspMI CTAG 2 cut(s) 1499, 1745
SstI GAGCTC 1 cut(s) 616
StyD4I CCNGG 5 cut(s) 179, 822, 1375, 1471, 1684
StyI CCWWGG 1 cut(s) 1440
TaaI ACNGT 6 cut(s) 44, 62, 223, 880, 1139, 1853
TaiI ACGT 5 cut(s) 28, 57, 684, 998, 1707
TaqI TCGA 4 cut(s) 51, 99, 443, 1601
TasI AATT 9 cut(s) 105, 405, 644, 726, 1087, 1482, 1755, 1834, 2047
TatI WGTACW 2 cut(s) 1591, 1734
TauI GCSGC 2 cut(s) 278, 1196
TfiI GAWTC 3 cut(s) 1067, 1166, 1921
TscAI CASTG 4 cut(s) 199, 226, 346, 1858
TseFI GTSAC 2 cut(s) 169, 293
TseI GCWGC 7 cut(s) 391, 394, 619, 622, 1004, 1544, 1613
Tsp45I GTSAC 2 cut(s) 169, 293
TspDTI ATGAA 8 cut(s) 486, 552, 654, 717, 747, 941, 1898, 2003
TspGWI ACGGA 2 cut(s) 751, 1159
TspRI CASTG 4 cut(s) 199, 226, 346, 1858
Tth111I GACNNNGTC 1 cut(s) 221
VneI GTGCAC 1 cut(s) 1476
VpaK11BI GGWCC 2 cut(s) 601, 1717
XapI RAATTY 3 cut(s) 105, 1087, 1834
XbaI TCTAGA 1 cut(s) 1744
XcmI CCANNNNNNNNNTGG 1 cut(s) 136
XmiI GTMKAC 3 cut(s) 57, 1125, 1844
XmnI GAANNNNTTC 1 cut(s) 1782
XspI CTAG 2 cut(s) 1499, 1745
ZraI GACGTC 1 cut(s) 55
Zsp2I ATGCAT 2 cut(s) 979, 1356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.