Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004093

Physical Location & Seq

Genomic Coordinates Reverse (-)

9722185 .. 9727331

Gene Structure 5147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G115100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGATAGCTTCTGGGTTCAAGCCACGTGGCCATATTCTTAACCGCTTGATTGATGTCTACTGTAAATCTTCAAATTTTAGTTATGCCCACCAACTGTTCGATCAAATTCCAAAACCAGACATTGTTGCTAGAACCACCTTGATTACGGCGTACTCTGCCATTGGGAATCTAACGCTGGCTCGGAAGATATTCAATGAAACTCCATTGAGCATGCGAGACACTGTTTGTTACAATGCGATGATCACAGGCTATTCTCGTAACAATGATGGCTATGCCTCTATTAGACTATTTTGTGAGATGAGGCAAGGTGGTTTTAGGCCTGACGATTTCACATATACGACTGTACTAAGTGGTGCGGCACAGATAGTGGATGTTGAAAAGCAGTGCCAGCAACTACATTGTGCAGTAGTTAAGTCAGGAACAGGGTTTGCCACTTCGGTATGGAATGCGCTGTTATCTGTTTATGTTAGATGTGCTTCTTCACCATTAGTATCATCATCATCATTGATGGGTGAAGCTAGGAATTTGTTTAATGAGATGCCTGAGAGAGATGAACTATCATGGACAACGATGATTACTGGGTACATAAGGAATGAAGACCTTCATGCAGCTCGGGAATTGCTAGATGGAATGGATGAAAGGATGGAAGTTGTATGGAATGCGATGATTTCGGGTTATGCTCACCACAATTCTTTTCAAGAAGCATTGCTATTGTTTAGGAAAATGCGGTTACTGGGGATTCATCAGGATGAATTTACTTACACTAGTGTTATTAGTACTTGCGCTAATAATGGACTATTTCAGCTTGGGAAGCAGGTGCATGCTTACATACTTAGAACTGAAGCGAAGCCTACTGTGGATTTTTCATTATCTGTGAACAATACATTGCTTACACTATATTACAAATGTGGTAAACTTGATGAAGCACGGTATATTTTTAATAATATGCCTGTTAAAGATCTTGTTTCTTGGAATGCAATCCTTTCAGGGTATGTTAGTGCAGGGCGCATCCAGGAAGCAAAATCCTTTTTTAAGGAAATGCCAGAGAGGAGCATTCTGACATGGACTGTGATGATATCTGGTTTAGCTCAAAATGGATTAGGAGAAGAAGCGATGAAGCTATTCAACCAAATGCGATCAGAAGGTTTTGAACCGTGTGATTATGCATTTTCTGGAGCAATTACATCTTGTGCTGCGCTTGGAGCATTGGAGCATGGACGCCAGCTCCATGCTCAACTAATTAGCTTGGGGTTTGATTCAAGCCTTTCAGCTGCAAATGCACTTATCACAATGTATGCAAGATGCGGAGTTTTCGAGGATGCGAACTCTGTGTTTCTTACCATGCCTTATATTGATTCAGTGTCTTGGAATGCTATGATTGCAGCTCTGGCCCAACATGGACATGGTGTTCAAGCAATAGACCTTTTTGAAAAAATGTTGAAGGCAGATATACTACCAGATAGAATAACTTTCCTCATCATTCTATCAGCTTGTAGTCATGCTGGTTTAGTCAAGGAAGGGCGCCATTATTTTAGTTCAATGCGTGTCTCTTATGGTATTAGCCCTGATGAAGGCCATTATGCTCGCATGATTGATCTGTTGTGTCGATGTGGGGAGTTCACAGAAGCCAAGGGCTTGATTGAATCAATGCCTTTTGAGCCAGGTGCACCGATTTGGGAGGCTCTTCTTGCTGGTTGTCGGACTCATGGGAATATGGATTTAGGAATTCAAGCAGCAGAACGACTCTTTGAGTTGGTGCCACAACACGATGGAACTTACATACTTTTGTCAAACCTGTATGCCGCTATAGGCCGTTGGGATGATGTGGCTAAGGTGCGGCAACTAATGAGAGATCGAGGGGTTAAGAAAGAGCCTGGTTGTAGTTGGATTGACGTTGAAAACATGGTCCACGTCTTCTTAGTTGGTGATACTGTGCACCCTGAGGTCCAAGCCGTGTACAAATATCTTGAGCAACTAGGACTTGAAATGAGGAAGTTAGGATATCTCCCTGACACAAAGTTTGTGTTGCATGATATGGAGTCTGAGCATAAGGAGTATTCCTTGTCCACTCACAGTGAGAAGCTTGCAGTTGCATTTGGGCTCATGAAGCTTCCTCTTGGAGCCACAATCAGAGTTTTTAAGAATCTTAGGATTTGTGGGGATTGCCATACTGCAATTAAGTTTATGTCAAGAGTGGTTGGAAGAGACATAATTGTGAGGGATGCAAAGAGGTTTCATCATTTTAGGAATGGTGAATGCTCTTGTGGCAATTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

760

Amino Acids

85.11

Weight (kDa)

6.42

Isoelectric Point (pI)

29.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25360
fragaria_vesca	FvH4_5g32410 FvH4_6g08990
malus_domestica	MD17G1265000.v1.1
prunus_persica	Prupe.3G114900_v2.0.a1 Prupe.3G115100_v2.0.a1
pyrus_communis	pycom17g26470
rosa_chinensis	RchiOBHm_Chr7g0221631 RchiOBHm_Chr7g0228891 RchiOBHm_Chr7g0228961
rosa_laevigata	RLG00000001538 RLG00000002149
rosa_multiflora	Rmu_sc0005016.1_g000036 Rmu_sc0005913.1_g000007 Rmu_sc0005913.1_g000028 Rmu_sc0027650.1_g000001
rosa_roxburghii	Rroxscaffold_3G00230820 Rroxscaffold_3G00238170
rosa_rugosa	Rorug07G0202700 Rorug07G0202700 Rorug07G0252700 Rorug07G0254200
rosa_samantha	Rh7AG343100 Rh7AG405900 Rh7BG333100 Rh7BG385400 Rh7CG360700 Rh7CG423700 Rh7DG341100
rosa_wichuraiana	Rw0G004030 Rw7G029100 Rw7G033660 Rw7G033680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	805
Acc36I	ACCTGC	1 cut(s)	805
AccB1I	GGYRCC	2 cut(s)	1521, 1756
AccI	GTMKAC	1 cut(s)	57
AciI	CCGC	6 cut(s)	43, 356, 727, 1305, 1803, 1837
AcoI	YGGCCR	1 cut(s)	28
AcsI	RAATTY	5 cut(s)	73, 105, 523, 752, 1725
AcuI	CTGAAG	1 cut(s)	861
AcvI	CACGTG	1 cut(s)	26
AcyI	GRCGYC	2 cut(s)	1219, 1522
AfaI	GTAC	5 cut(s)	152, 345, 584, 778, 1958
AfiI	CCNNNNNNNGG	1 cut(s)	1571
AhlI	ACTAGT	1 cut(s)	764
AjiI	CACGTC	1 cut(s)	1912
AjnI	CCWGG	3 cut(s)	1011, 1660, 1873
AloI	GAACNNNNNNTCC	2 cut(s)	1392, 1424
Alw21I	GWGCWC	2 cut(s)	1669, 1938
Alw26I	GTCTC	3 cut(s)	210, 1552, 2199
Alw44I	GTGCAC	2 cut(s)	1665, 1934
Ama87I	CYCGRG	1 cut(s)	612
AoxI	GGCC	5 cut(s)	28, 317, 1389, 1573, 1810
ApaLI	GTGCAC	2 cut(s)	1665, 1934
ApeKI	GCWGC	5 cut(s)	608, 1193, 1271, 1382, 1733
ApoI	RAATTY	5 cut(s)	73, 105, 523, 752, 1725
ArsI	GACNNNNNNTTYG	2 cut(s)	2003, 2035
Asp700I	GAANNNNTTC	3 cut(s)	188, 600, 1121
AspLEI	GCGC	5 cut(s)	451, 785, 1008, 1198, 1524
AspS9I	GGNCC	3 cut(s)	1390, 1906, 1945
AsuHPI	GGTGA	5 cut(s)	474, 524, 674, 1937, 2264
AvaI	CYCGRG	1 cut(s)	612
AvaII	GGWCC	2 cut(s)	1906, 1945
AxyI	CCTNAGG	1 cut(s)	1941
BaeGI	GKGCMC	2 cut(s)	1669, 1938
BalI	TGGCCA	1 cut(s)	30
BanI	GGYRCC	2 cut(s)	1521, 1756
BanII	GRGCYC	1 cut(s)	2103
BbrPI	CACGTG	1 cut(s)	26
BbsI	GAAGAC	2 cut(s)	603, 1906
Bbv12I	GWGCWC	2 cut(s)	1669, 1938
BbvI	GCAGC	5 cut(s)	620, 1180, 1258, 1394, 1745
BccI	CCATC	5 cut(s)	260, 502, 620, 637, 1763
BceAI	ACGGC	3 cut(s)	162, 1797, 1937
BciT130I	CCWGG	3 cut(s)	1013, 1662, 1875
BclI	TGATCA	1 cut(s)	240
BcoDI	GTCTC	3 cut(s)	210, 1552, 2199
BcuI	ACTAGT	1 cut(s)	764
BfaI	CTAG	5 cut(s)	129, 519, 623, 765, 1976
BfmI	CTRYAG	1 cut(s)	1806
BfoI	RGCGCY	1 cut(s)	1525
BfuAI	ACCTGC	1 cut(s)	805
BglII	AGATCT	1 cut(s)	958
BisI	GCNGC	8 cut(s)	357, 609, 1194, 1272, 1383, 1734, 1803, 1838
BlsI	GCNGC	8 cut(s)	358, 610, 1195, 1273, 1384, 1735, 1804, 1839
BmcAI	AGTACT	1 cut(s)	778
Bme1390I	CCNGG	3 cut(s)	1013, 1662, 1875
Bme18I	GGWCC	2 cut(s)	1906, 1945
BmeT110I	CYCGRG	1 cut(s)	612
BmgBI	CACGTC	1 cut(s)	1912
BmgT120I	GGNCC	3 cut(s)	1390, 1906, 1945
BmiI	GGNNCC	3 cut(s)	1523, 1758, 2122
BmrFI	CCNGG	3 cut(s)	1013, 1662, 1875
BmrI	ACTGGG	2 cut(s)	588, 743
BmsI	GCATC	5 cut(s)	528, 1017, 1292, 1309, 2212
BmuI	ACTGGG	2 cut(s)	588, 743
BpiI	GAAGAC	2 cut(s)	603, 1906
BpmI	CTGGAG	1 cut(s)	1194
Bpu10I	CCTNAGC	1 cut(s)	1830
BpuEI	CTTGAG	1 cut(s)	1988
BsaAI	YACGTR	1 cut(s)	26
BsaHI	GRCGYC	2 cut(s)	1219, 1522
BsaJI	CCNNGG	1 cut(s)	1629
BsaXI	ACNNNNNCTCC	2 cut(s)	1209, 1239
Bsc4I	CCNNNNNNNGG	1 cut(s)	1571
Bse1I	ACTGG	3 cut(s)	583, 738, 2279
Bse21I	CCTNAGG	1 cut(s)	1941
Bse3DI	GCAATG	2 cut(s)	704, 884
BseBI	CCWGG	3 cut(s)	1013, 1662, 1875
BseDI	CCNNGG	1 cut(s)	1629
BseGI	GGATG	8 cut(s)	376, 640, 648, 754, 1008, 1324, 1825, 2227
BseLI	CCNNNNNNNGG	1 cut(s)	1571
BseMI	GCAATG	2 cut(s)	704, 884
BseMII	CTCAG	3 cut(s)	534, 1932, 2034
BseNI	ACTGG	3 cut(s)	583, 738, 2279
BseRI	GAGGAG	1 cut(s)	1063
BseSI	GKGCMC	2 cut(s)	1669, 1938
BseXI	GCAGC	5 cut(s)	620, 1180, 1258, 1394, 1745
BsgI	GTGCAG	2 cut(s)	423, 1020
BshFI	GGCC	5 cut(s)	30, 319, 1391, 1575, 1812
BshNI	GGYRCC	2 cut(s)	1521, 1756
BsiHKAI	GWGCWC	2 cut(s)	1669, 1938
BsiHKCI	CYCGRG	1 cut(s)	612
BslI	CCNNNNNNNGG	1 cut(s)	1571
BsmAI	GTCTC	3 cut(s)	210, 1552, 2199
BsmI	GAATGC	6 cut(s)	451, 664, 979, 1053, 1375, 2261
BsnI	GGCC	5 cut(s)	30, 319, 1391, 1575, 1812
BsoBI	CYCGRG	1 cut(s)	612
Bsp1286I	GDGCHC	3 cut(s)	1669, 1938, 2103
Bsp1407I	TGTACA	1 cut(s)	1956
Bsp143I	GATC	6 cut(s)	100, 240, 958, 1136, 1594, 1852
BspACI	CCGC	6 cut(s)	43, 356, 727, 1305, 1803, 1837
BspANI	GGCC	5 cut(s)	30, 319, 1391, 1575, 1812
BspCNI	CTCAG	3 cut(s)	535, 1933, 2035
BspHI	TCATGA	1 cut(s)	2103
BspLI	GGNNCC	3 cut(s)	1523, 1758, 2122
BspMI	ACCTGC	1 cut(s)	805
BspQI	GCTCTTC	1 cut(s)	1689
BspT107I	GGYRCC	2 cut(s)	1521, 1756
BsrDI	GCAATG	2 cut(s)	704, 884
BsrGI	TGTACA	1 cut(s)	1956
BsrI	ACTGG	3 cut(s)	583, 738, 2279
BssECI	CCNNGG	1 cut(s)	1629
BssMI	GATC	6 cut(s)	100, 240, 958, 1136, 1594, 1852
BssNI	GRCGYC	2 cut(s)	1219, 1522
BssT1I	CCWWGG	1 cut(s)	1629
Bst2UI	CCWGG	3 cut(s)	1013, 1662, 1875
Bst6I	CTCTTC	2 cut(s)	1689, 2197
BstACI	GRCGYC	2 cut(s)	1219, 1522
BstAUI	TGTACA	1 cut(s)	1956
BstBAI	YACGTR	1 cut(s)	26
BstC8I	GCNNGC	7 cut(s)	177, 212, 389, 822, 1223, 1585, 2085
BstDEI	CTNAG	8 cut(s)	347, 543, 833, 1830, 1918, 1941, 2043, 2147
BstENI	CCTNNNNNAGG	1 cut(s)	1569
BstF5I	GGATG	8 cut(s)	376, 640, 648, 754, 1008, 1324, 1825, 2227
BstH2I	RGCGCY	1 cut(s)	1525
BstHHI	GCGC	5 cut(s)	451, 785, 1008, 1198, 1524
BstKTI	GATC	6 cut(s)	103, 243, 961, 1139, 1597, 1855
BstMAI	GTCTC	3 cut(s)	210, 1552, 2199
BstMBI	GATC	6 cut(s)	100, 240, 958, 1136, 1594, 1852
BstNI	CCWGG	3 cut(s)	1013, 1662, 1875
BstNSI	RCATGY	2 cut(s)	214, 824
BstSCI	CCNGG	3 cut(s)	1011, 1660, 1873
BstSFI	CTRYAG	1 cut(s)	1806
BstSLI	GKGCMC	2 cut(s)	1669, 1938
BstV1I	GCAGC	5 cut(s)	620, 1180, 1258, 1394, 1745
BstV2I	GAAGAC	2 cut(s)	603, 1906
BstX2I	RGATCY	1 cut(s)	958
BstYI	RGATCY	1 cut(s)	958
Bsu36I	CCTNAGG	1 cut(s)	1941
BsuRI	GGCC	5 cut(s)	30, 319, 1391, 1575, 1812
BtgZI	GCGATG	3 cut(s)	251, 677, 1127
BtrI	CACGTC	1 cut(s)	1912
BtsCI	GGATG	8 cut(s)	376, 640, 648, 754, 1008, 1324, 1825, 2227
BtsI	GCAGTG	1 cut(s)	389
BtsIMutI	CAGTG	4 cut(s)	219, 389, 1365, 2080
BveI	ACCTGC	1 cut(s)	805
Cac8I	GCNNGC	7 cut(s)	177, 212, 389, 822, 1223, 1585, 2085
CciI	TCATGA	1 cut(s)	2103
CfoI	GCGC	5 cut(s)	451, 785, 1008, 1198, 1524
Cfr13I	GGNCC	3 cut(s)	1390, 1906, 1945
CseI	GACGC	1 cut(s)	1227
Csp6I	GTAC	5 cut(s)	151, 344, 583, 777, 1957
CspCI	CAANNNNNGTGG	2 cut(s)	7, 42
CviQI	GTAC	5 cut(s)	151, 344, 583, 777, 1957
DdeI	CTNAG	8 cut(s)	347, 543, 833, 1830, 1918, 1941, 2043, 2147
DinI	GGCGCC	1 cut(s)	1523
DpnI	GATC	6 cut(s)	102, 242, 960, 1138, 1596, 1854
DpnII	GATC	6 cut(s)	100, 240, 958, 1136, 1594, 1852
EaeI	YGGCCR	1 cut(s)	28
Eam1104I	CTCTTC	2 cut(s)	1689, 2197
EarI	CTCTTC	2 cut(s)	1689, 2197
Eco130I	CCWWGG	1 cut(s)	1629
Eco147I	AGGCCT	1 cut(s)	319
Eco24I	GRGCYC	1 cut(s)	2103
Eco32I	GATATC	2 cut(s)	1077, 2003
Eco47I	GGWCC	2 cut(s)	1906, 1945
Eco57I	CTGAAG	1 cut(s)	861
Eco72I	CACGTG	1 cut(s)	26
Eco81I	CCTNAGG	1 cut(s)	1941
Eco88I	CYCGRG	1 cut(s)	612
EcoNI	CCTNNNNNAGG	1 cut(s)	1569
EcoRI	GAATTC	1 cut(s)	1725
EcoRII	CCWGG	3 cut(s)	1011, 1660, 1873
EcoRV	GATATC	2 cut(s)	1077, 2003
EcoT14I	CCWWGG	1 cut(s)	1629
EcoT22I	ATGCAT	1 cut(s)	1168
EcoT38I	GRGCYC	1 cut(s)	2103
EgeI	GGCGCC	1 cut(s)	1523
EheI	GGCGCC	1 cut(s)	1523
ErhI	CCWWGG	1 cut(s)	1629
FbaI	TGATCA	1 cut(s)	240
FblI	GTMKAC	1 cut(s)	57
Fnu4HI	GCNGC	8 cut(s)	357, 609, 1194, 1272, 1383, 1734, 1803, 1838
FokI	GGATG	8 cut(s)	383, 647, 655, 761, 995, 1331, 1832, 2234
FriOI	GRGCYC	1 cut(s)	2103
Fsp4HI	GCNGC	8 cut(s)	357, 609, 1194, 1272, 1383, 1734, 1803, 1838
FspBI	CTAG	5 cut(s)	129, 519, 623, 765, 1976
GlaI	GCGC	5 cut(s)	450, 784, 1007, 1197, 1523
GluI	GCNGC	8 cut(s)	357, 609, 1194, 1272, 1383, 1734, 1803, 1838
GsuI	CTGGAG	1 cut(s)	1194
HaeII	RGCGCY	1 cut(s)	1525
HaeIII	GGCC	5 cut(s)	30, 319, 1391, 1575, 1812
HgaI	GACGC	1 cut(s)	1227
HhaI	GCGC	5 cut(s)	451, 785, 1008, 1198, 1524
Hin1I	GRCGYC	2 cut(s)	1219, 1522
Hin6I	GCGC	5 cut(s)	449, 783, 1006, 1196, 1522
HinP1I	GCGC	5 cut(s)	449, 783, 1006, 1196, 1522
HindIII	AAGCTT	2 cut(s)	2081, 2108
HinfI	GANTC	9 cut(s)	166, 739, 1256, 1355, 1643, 1702, 1743, 2039, 2143
HphI	GGTGA	5 cut(s)	474, 524, 674, 1937, 2264
Hpy166II	GTNNAC	9 cut(s)	58, 877, 914, 1620, 1667, 1909, 1936, 1957, 2067
Hpy188I	TCNGA	6 cut(s)	183, 1059, 1141, 1701, 2044, 2132
Hpy188III	TCNNGA	8 cut(s)	417, 614, 698, 746, 1173, 1967, 2104, 2190
Hpy8I	GTNNAC	9 cut(s)	58, 877, 914, 1620, 1667, 1909, 1936, 1957, 2067
HpyAV	CCTTC	5 cut(s)	611, 1136, 1435, 1511, 1565
HpyCH4IV	ACGT	3 cut(s)	25, 1893, 1911
HpyF3I	CTNAG	8 cut(s)	347, 543, 833, 1830, 1918, 1941, 2043, 2147
HpySE526I	ACGT	3 cut(s)	25, 1893, 1911
Hsp92I	GRCGYC	2 cut(s)	1219, 1522
HspAI	GCGC	5 cut(s)	449, 783, 1006, 1196, 1522
KasI	GGCGCC	1 cut(s)	1521
Ksp22I	TGATCA	1 cut(s)	240
Kzo9I	GATC	6 cut(s)	100, 240, 958, 1136, 1594, 1852
LguI	GCTCTTC	1 cut(s)	1689
LmnI	GCTCC	6 cut(s)	1050, 1175, 1202, 1210, 1230, 2120
Lsp1109I	GCAGC	5 cut(s)	620, 1180, 1258, 1394, 1745
LweI	GCATC	5 cut(s)	528, 1017, 1292, 1309, 2212
MaeI	CTAG	5 cut(s)	129, 519, 623, 765, 1976
MaeII	ACGT	3 cut(s)	25, 1893, 1911
MaeIII	GTNAC	3 cut(s)	227, 257, 729
MalI	GATC	6 cut(s)	102, 242, 960, 1138, 1596, 1854
MboI	GATC	6 cut(s)	100, 240, 958, 1136, 1594, 1852
MboII	GAAGA	8 cut(s)	60, 196, 471, 608, 1118, 1676, 1906, 2214
MflI	RGATCY	1 cut(s)	958
MhlI	GDGCHC	3 cut(s)	1669, 1938, 2103
MlsI	TGGCCA	1 cut(s)	30
MluNI	TGGCCA	1 cut(s)	30
Mly113I	GGCGCC	1 cut(s)	1522
MlyI	GAGTC	3 cut(s)	1696, 1737, 2048
MmeI	TCCRAC	3 cut(s)	1679, 1865, 2179
Mox20I	TGGCCA	1 cut(s)	30
Mph1103I	ATGCAT	1 cut(s)	1168
MroXI	GAANNNNTTC	3 cut(s)	188, 600, 1121
MscI	TGGCCA	1 cut(s)	30
MseI	TTAA	9 cut(s)	39, 411, 531, 939, 954, 1032, 1863, 2139, 2178
MslI	CAYNNNNRTG	3 cut(s)	747, 1401, 2213
Msp20I	TGGCCA	1 cut(s)	30
MspA1I	CMGCKG	1 cut(s)	1271
MspR9I	CCNGG	3 cut(s)	1013, 1662, 1875
Mva1269I	GAATGC	6 cut(s)	451, 664, 979, 1053, 1375, 2261
MvaI	CCWGG	3 cut(s)	1013, 1662, 1875
NarI	GGCGCC	1 cut(s)	1522
NdeII	GATC	6 cut(s)	100, 240, 958, 1136, 1594, 1852
NlaIV	GGNNCC	3 cut(s)	1523, 1758, 2122
NsiI	ATGCAT	1 cut(s)	1168
NspI	RCATGY	2 cut(s)	214, 824
PaeI	GCATGC	2 cut(s)	214, 824
PagI	TCATGA	1 cut(s)	2103
PaqCI	CACCTGC	1 cut(s)	805
PceI	AGGCCT	1 cut(s)	319
PciSI	GCTCTTC	1 cut(s)	1689
PctI	GAATGC	6 cut(s)	451, 664, 979, 1053, 1375, 2261
PdmI	GAANNNNTTC	3 cut(s)	188, 600, 1121
PfeI	GAWTC	6 cut(s)	166, 739, 1256, 1355, 1643, 2143
PfoI	TCCNGGA	1 cut(s)	1011
PkrI	GCNGC	8 cut(s)	358, 610, 1195, 1273, 1384, 1735, 1804, 1839
PleI	GAGTC	3 cut(s)	1696, 1737, 2047
PluTI	GGCGCC	1 cut(s)	1525
PmaCI	CACGTG	1 cut(s)	26
PmlI	CACGTG	1 cut(s)	26
PpsI	GAGTC	3 cut(s)	1696, 1737, 2047
Ppu21I	YACGTR	1 cut(s)	26
Psp6I	CCWGG	3 cut(s)	1011, 1660, 1873
PspCI	CACGTG	1 cut(s)	26
PspGI	CCWGG	3 cut(s)	1011, 1660, 1873
PspN4I	GGNNCC	3 cut(s)	1523, 1758, 2122
PspPI	GGNCC	3 cut(s)	1390, 1906, 1945
PsuI	RGATCY	1 cut(s)	958
PvuII	CAGCTG	1 cut(s)	1271
RsaI	GTAC	5 cut(s)	152, 345, 584, 778, 1958
RsaNI	GTAC	5 cut(s)	151, 344, 583, 777, 1957
RseI	CAYNNNNRTG	3 cut(s)	747, 1401, 2213
SapI	GCTCTTC	1 cut(s)	1689
SaqAI	TTAA	9 cut(s)	39, 411, 531, 939, 954, 1032, 1863, 2139, 2178
SatI	GCNGC	8 cut(s)	357, 609, 1194, 1272, 1383, 1734, 1803, 1838
Sau3AI	GATC	6 cut(s)	100, 240, 958, 1136, 1594, 1852
Sau96I	GGNCC	3 cut(s)	1390, 1906, 1945
ScaI	AGTACT	1 cut(s)	778
SchI	GAGTC	3 cut(s)	1696, 1737, 2048
ScrFI	CCNGG	3 cut(s)	1013, 1662, 1875
SduI	GDGCHC	3 cut(s)	1669, 1938, 2103
SfaNI	GCATC	5 cut(s)	528, 1017, 1292, 1309, 2212
SfcI	CTRYAG	1 cut(s)	1806
SfoI	GGCGCC	1 cut(s)	1523
SinI	GGWCC	2 cut(s)	1906, 1945
SmiMI	CAYNNNNRTG	3 cut(s)	747, 1401, 2213
SmlI	CTYRAG	1 cut(s)	1967
SmoI	CTYRAG	1 cut(s)	1967
SpeI	ACTAGT	1 cut(s)	764
SphI	GCATGC	2 cut(s)	214, 824
SseBI	AGGCCT	1 cut(s)	319
SsiI	CCGC	6 cut(s)	43, 356, 727, 1305, 1803, 1837
SspDI	GGCGCC	1 cut(s)	1521
SspMI	CTAG	5 cut(s)	129, 519, 623, 765, 1976
StuI	AGGCCT	1 cut(s)	319
StyD4I	CCNGG	3 cut(s)	1011, 1660, 1873
StyI	CCWWGG	1 cut(s)	1629
TaiI	ACGT	3 cut(s)	28, 1896, 1914
TaqI	TCGA	4 cut(s)	99, 1314, 1606, 1855
TatI	WGTACW	3 cut(s)	343, 776, 1956
TauI	GCSGC	3 cut(s)	359, 1805, 1840
TfiI	GAWTC	6 cut(s)	166, 739, 1256, 1355, 1643, 2143
Tru1I	TTAA	9 cut(s)	39, 411, 531, 939, 954, 1032, 1863, 2139, 2178
Tru9I	TTAA	9 cut(s)	39, 411, 531, 939, 954, 1032, 1863, 2139, 2178
TscAI	CASTG	4 cut(s)	226, 389, 1365, 2080
TseI	GCWGC	5 cut(s)	608, 1193, 1271, 1382, 1733
TspRI	CASTG	4 cut(s)	226, 389, 1365, 2080
VneI	GTGCAC	2 cut(s)	1665, 1934
VpaK11BI	GGWCC	2 cut(s)	1906, 1945
XagI	CCTNNNNNAGG	1 cut(s)	1569
XapI	RAATTY	5 cut(s)	73, 105, 523, 752, 1725
XceI	RCATGY	2 cut(s)	214, 824
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1400
XmiI	GTMKAC	1 cut(s)	57
XmnI	GAANNNNTTC	3 cut(s)	188, 600, 1121
XspI	CTAG	5 cut(s)	129, 519, 623, 765, 1976
ZrmI	AGTACT	1 cut(s)	778
Zsp2I	ATGCAT	1 cut(s)	1168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.