RLG00000002149

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0004093
Physical Location & Seq
Reverse (-)
26321105 .. 26326865
5761 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002149

Sequence Viewer

Length: 2838 bp
ATGATCGCTTCCGGCTTCCACCCACGTGGCCATATCCTCAACCGTTTGATCGACGTCTACTGCAAATCTTCAAATCTTCGCTACGCACTCCACCTGTTCGACCAAATTCCCAACCCGGACATCGTCGCCAGAACGACTCTGGTCTCGGCATATTCCGGCGTCGGGGACGTCACGCTGGCCCGGAGAGTCTTCAGTGAAACTCCGCTCAGCATGAGAGACACTGTTAGCTACAATGCCATGATCGCAGGCTACTCTCATAACAGGGACGGCAATGCCGCCGTTGAGCTGTTTCGTGACATGAGGCGAGCCGGTTTTCACCCCGATGAGTTTACCTTCACCAGTGTGCTGAGTTCTCTGGCGCTTATAGTGGAGGAGGAGAAGCAATGCCAGCAGCTGCATTGTGCAATTGTTAAGTCTGGAGCATTGCTGGCCACTTCGGTGTCCAATGCGTTGGTGTCTGTGTATGTTAAGTGTGCTTCTTCGCCGTTGGTGTCGTCGTCATCGGTGGTGGTGGCTGCAGCGAGGAAGGTGTTTGATGAAATGCCTAAGAGAGATGAGCTGTCGTGGACGACGATGATCACTGGCTATGTGAGGAATGAGGACCTTGATGGAGCTCGGCAGCTGCTTGATGGGATGGATGAAAAATTGGAAGTGGCGTGGAATGCAATGATTTCGGGATATGTGCATCACGGTTTTTGTCATGAAGCATTGAAATTGTTTAGGGAAATGCATTTAATTGGGATTCGCCAGGATGAGTTTACGTACACGAGTGTTATTAGTGCTTGTGCTAACAATGGCTTATTTAAGCATGGGAAGCAGCTGCATGCTTACATACTAAGATCTGAAGCGAAACCGACTCTGGACTTTTCTTTATCTGTGAATAATGCATTGGTGACACTATACTTTAGGTGCGGTAAAATTGATGAAGCACGATATATTTTTAATAATATGTCTGTCAGAGATCTTGTTTCTTGGAATGCAATATTGTCAGGGTATGTGAGTGCAGGGCGCATTCAGCAAGCAAAGTCCTTTTTCGAGGAAATGCCGGAAAGGAGTGGTCTAACGTGGACTGTAATAATATCTGGTTTAGCTCAAAATGGATGTGGGGAAGAAGCTATGAAGCTATTTAACCAAATGAGATTAGATGGTTTTAAACCCTGTGATTATGCATTTGCTGGAGCTATTACGTCTTGTGCTGCTCTTGGGGCATTGGAGCATGGACGCCAGCTCCATGCTCAACTAATATGCTTGGGGCATGATTCAAGCCTTTCAGTCGGAAATTCACTTATTACTATGTATGCGAGATGTGGGGTTGTAGATGATGCTGACTTTGTGTTCCTTACAATGCCTTATATTGATTCCGTGTCGTGGAATGCTATGATCGCAGCTCTGGCACAACATGGATATGGTGTCCAAGCAATAAGACTTTTCGAACAAATGTTGGAGGAAGATATACTGCCAGATAGAATAACTTTCCTCACTATTCTCTCAGCTTGTAGTCATACTGGTTTAGTTAAAGAAGGACGCCATTATTTTCGTTTAATGCATGACTCTTACGGTATTGCCCCTGGTGAAGATCATTATGCTCGTATGATTGATTTGTTGTGCCGATTTGGGGAGCTGACAGAGGCCAAGGACTTAATCAAATCAATGCCTTTTGAACCAGGTGCACCGATATGGGAGGCTATTCTAGCTGGTTGCCGGACTCATGGGAATATGGATTTAGGTATTCAAGCTGCAGAACGACTCTTTGAGCTGGTGCCCCAGCATGATGGAACCTATGTACTTTTGTCGAACTTGTATGCTGCTTTAGGCCGTTGGGATGATGTGGCTAAGGTGCGAACACTAATGAGGGAGCGAGGGGTGAAGAAAGAACCTGGTTGTAGTTGGATTGACGTTGAAAATATGGTCCATGTCTTCTTGGTTGGTGATACTGTGCACCCTGAGGTACATGAGGTGTACAAGTATCTAGAGCAACTTGTTCTTAAAATGAGGAAGTTAGGATATGTTCCTGACACAAAGTTTGCGTTGCATGATATGGAGTCTGAGCATAAAGAGAATTCCTTGTCTACTCACAGTGAGAAGCTTGCAGTTGCATTTGGGATTATGAAGCTTCCTCTTGGAGCCACAATCAGAGTTTTTAAGAATCTTAGGATTTGTGGGGATTGCCATAATGCATTTAAGTTTATGTCGAGAGTGGTTGGGAGAGAAATAGTCGTGAGAGATGCCAAGAGACTCAAGCAAGAGCGAGGTTGCATAAAAATGAGATGGATCTTCTTCCTTATTTCCAATGATGGGGAAGATATGGAAACCAGGTCTGGAAGTTGGAGGAAGGCAGTCATTAATGCATTTAAGTTTATGTCAAGAGTGGCTGGGAGAGAAATAGTTGTAAGAGATGCCAAGAGGCTCAAGCAAGAGCAAGGTAGCATAAAAATGAGATGGATCTTCTTCCTTATTTCCAATGATGGGGAGGACATGGAAATCAGGTCTGGAAGTTGGCGGAAGTCTGGTGAATTACCCTATGTCGAAGAAATTGATACATCACCACCAGGTTTTGGTTCCATTGCCACATTACCATTCCCTGAGTTTCCATCTTGTGTCTGTCAGCATCAAATGGGAGCTCCCATCAGAAGTGTTCCAGTGATTCTTGATTTCAATGTCTGTTTTCCCTGGAAGTCTCCCTGCAATAAGAGACCATCTGCAGATGCCAATAGGCTATCACCACTTACAAAATCAATCTATAGAGAAGAAAGAAAATACATAAAACAGAAATTTTCATTAAAGAATGAAGGCAGTGGTAGACGTGTCGCTGAATCGCTTGTAGTTATGCCGGTTTAG

Protein Analysis

946

Amino Acids

106.19

Weight (kDa)

7.55

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 72 - 120 2.2e-14 PPR repeat family
PPR PF01535 75 - 105 3e-07 PPR repeat
PPR_2 PF13041 218 - 264 2.7e-11 PPR repeat family
PPR PF01535 218 - 248 9.3e-09 PPR repeat
PPR_2 PF13041 321 - 351 4.4e-06 PPR repeat family
PPR PF01535 323 - 351 5.3e-06 PPR repeat
PPR_2 PF13041 355 - 398 6.4e-07 PPR repeat family
PPR PF01535 355 - 384 1.1e-07 PPR repeat
PPR_2 PF13041 453 - 500 1.7e-10 PPR repeat family
PPR PF01535 455 - 485 4.1e-06 PPR repeat
E_motif PF20431 570 - 632 1.8e-22 E motif
DYW_deaminase PF14432 668 - 747 2.6e-30 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 57, 171
AccB1I GGYRCC 1 cut(s) 1759
AccB7I CCANNNNNTGG 1 cut(s) 2555
AccBSI CCGCTC 1 cut(s) 205
AccI GTMKAC 3 cut(s) 57, 2069, 2800
AciI CCGC 4 cut(s) 203, 276, 912, 2500
AclWI GGATC 2 cut(s) 2279, 2450
AcoI YGGCCR 2 cut(s) 28, 429
AcsI RAATTY 4 cut(s) 105, 1279, 2059, 2771
AcuI CTGAAG 2 cut(s) 175, 864
AcvI CACGTG 1 cut(s) 26
AcyI GRCGYC 5 cut(s) 54, 159, 168, 1222, 1525
AfaI GTAC 4 cut(s) 764, 1785, 1950, 1961
AfiI CCNNNNNNNGG 6 cut(s) 162, 1368, 1615, 2295, 2466, 2555
AflIII ACRYGT 1 cut(s) 2803
AgsI TTSAA 7 cut(s) 72, 712, 1263, 1661, 1733, 1901, 2656
AjiI CACGTC 1 cut(s) 2804
AjnI CCWGG 7 cut(s) 747, 1567, 1663, 1876, 2312, 2548, 2669
AjuI GAANNNNNNNTTGG 2 cut(s) 872, 904
AleI CACNNNNGTG 3 cut(s) 24, 341, 437
Alw21I GWGCWC 4 cut(s) 616, 1672, 1941, 2623
Alw26I GTCTC 5 cut(s) 148, 210, 2227, 2682, 2686
Alw44I GTGCAC 2 cut(s) 1668, 1937
AlwI GGATC 2 cut(s) 2279, 2450
AlwNI CAGNNNCTG 1 cut(s) 394
AoxI GGCC 5 cut(s) 28, 177, 429, 1629, 1813
ApaLI GTGCAC 2 cut(s) 1668, 1937
ApoI RAATTY 4 cut(s) 105, 1279, 2059, 2771
ArsI GACNNNNNNTTYG 2 cut(s) 2006, 2038
AseI ATTAAT 1 cut(s) 2343
AspLEI GCGC 2 cut(s) 361, 1011
AspS9I GGNCC 3 cut(s) 178, 601, 1909
AsuC2I CCSGG 2 cut(s) 116, 181
AsuHPI GGTGA 9 cut(s) 308, 328, 904, 1583, 1876, 1940, 2522, 2535, 2712
AsuII TTCGAA 1 cut(s) 1431
AvaII GGWCC 2 cut(s) 601, 1909
AxyI CCTNAGG 1 cut(s) 1944
BaeGI GKGCMC 3 cut(s) 1672, 1764, 1941
BalI TGGCCA 2 cut(s) 30, 431
BanI GGYRCC 1 cut(s) 1759
BanII GRGCYC 2 cut(s) 616, 2623
BauI CACGAG 1 cut(s) 766
BbrPI CACGTG 1 cut(s) 26
BbsI GAAGAC 2 cut(s) 181, 1909
Bbv12I GWGCWC 4 cut(s) 616, 1672, 1941, 2623
BceAI ACGGC 4 cut(s) 263, 283, 469, 1800
BcgI CGANNNNNNTGC 2 cut(s) 654, 688
BciT130I CCWGG 7 cut(s) 749, 1569, 1665, 1878, 2314, 2550, 2671
BclI TGATCA 1 cut(s) 576
BcnI CCSGG 2 cut(s) 116, 181
BcoDI GTCTC 5 cut(s) 148, 210, 2227, 2682, 2686
BfaI CTAG 2 cut(s) 1691, 1970
BfmI CTRYAG 4 cut(s) 516, 1737, 2700, 2740
BfoI RGCGCY 1 cut(s) 362
BglII AGATCT 2 cut(s) 839, 961
BlpI GCTNAGC 1 cut(s) 206
Bme1390I CCNGG 9 cut(s) 116, 181, 749, 1569, 1665, 1878, 2314, 2550, 2671
Bme18I GGWCC 2 cut(s) 601, 1909
BmgBI CACGTC 1 cut(s) 2804
BmgT120I GGNCC 3 cut(s) 178, 601, 1909
BmiI GGNNCC 4 cut(s) 1761, 1777, 2125, 2560
BmrFI CCNGG 9 cut(s) 116, 181, 749, 1569, 1665, 1878, 2314, 2550, 2671
BmsI GCATC 6 cut(s) 694, 1312, 2215, 2386, 2617, 2695
BoxI GACNNNNGTC 1 cut(s) 140
BpiI GAAGAC 2 cut(s) 181, 1909
BpmI CTGGAG 2 cut(s) 438, 1197
Bpu10I CCTNAGC 1 cut(s) 1833
Bpu1102I GCTNAGC 1 cut(s) 206
Bpu14I TTCGAA 1 cut(s) 1431
BpuEI CTTGAG 2 cut(s) 2222, 2393
BpuMI CCSGG 2 cut(s) 116, 181
BsaAI YACGTR 2 cut(s) 26, 762
BsaHI GRCGYC 5 cut(s) 54, 159, 168, 1222, 1525
BsaI GGTCTC 2 cut(s) 148, 2686
BsaJI CCNNGG 3 cut(s) 1567, 1632, 2669
BsaXI ACNNNNNCTCC 2 cut(s) 1212, 1242
Bsc4I CCNNNNNNNGG 6 cut(s) 162, 1368, 1615, 2295, 2466, 2555
Bse118I RCCGGY 2 cut(s) 308, 2830
Bse1I ACTGG 4 cut(s) 339, 586, 1510, 2639
Bse21I CCTNAGG 1 cut(s) 1944
Bse3DI GCAATG 5 cut(s) 277, 389, 422, 672, 2562
BseBI CCWGG 7 cut(s) 749, 1569, 1665, 1878, 2314, 2550, 2671
BseDI CCNNGG 3 cut(s) 1567, 1632, 2669
BseGI GGATG 5 cut(s) 639, 643, 757, 1106, 1828
BseLI CCNNNNNNNGG 6 cut(s) 162, 1368, 1615, 2295, 2466, 2555
BseMI GCAATG 5 cut(s) 277, 389, 422, 672, 2562
BseMII CTCAG 6 cut(s) 220, 338, 1503, 1935, 2037, 2574
BseNI ACTGG 4 cut(s) 339, 586, 1510, 2639
BseRI GAGGAG 2 cut(s) 386, 389
BseSI GKGCMC 3 cut(s) 1672, 1764, 1941
BseYI CCCAGC 2 cut(s) 1764, 2372
BsgI GTGCAG 1 cut(s) 1023
BshFI GGCC 5 cut(s) 30, 179, 431, 1631, 1815
BshNI GGYRCC 1 cut(s) 1759
BsiHKAI GWGCWC 4 cut(s) 616, 1672, 1941, 2623
BsiSI CCGG 8 cut(s) 12, 116, 156, 181, 309, 1046, 1702, 2831
BslFI GGGAC 2 cut(s) 179, 278
BslI CCNNNNNNNGG 6 cut(s) 162, 1368, 1615, 2295, 2466, 2555
BsmAI GTCTC 5 cut(s) 148, 210, 2227, 2682, 2686
BsmFI GGGAC 2 cut(s) 179, 278
BsmI GAATGC 4 cut(s) 667, 982, 1011, 1378
BsnI GGCC 5 cut(s) 30, 179, 431, 1631, 1815
Bso31I GGTCTC 2 cut(s) 148, 2686
Bsp119I TTCGAA 1 cut(s) 1431
Bsp1286I GDGCHC 5 cut(s) 616, 1672, 1764, 1941, 2623
Bsp1407I TGTACA 1 cut(s) 1959
Bsp1720I GCTNAGC 1 cut(s) 206
BspACI CCGC 4 cut(s) 203, 276, 912, 2500
BspANI GGCC 5 cut(s) 30, 179, 431, 1631, 1815
BspCNI CTCAG 6 cut(s) 219, 339, 1502, 1936, 2038, 2575
BspHI TCATGA 1 cut(s) 700
BspLI GGNNCC 4 cut(s) 1761, 1777, 2125, 2560
BspMAI CTGCAG 3 cut(s) 520, 1741, 2704
BspPI GGATC 2 cut(s) 2279, 2450
BspT104I TTCGAA 1 cut(s) 1431
BspT107I GGYRCC 1 cut(s) 1759
BspTNI GGTCTC 2 cut(s) 148, 2686
BsrBI CCGCTC 1 cut(s) 205
BsrDI GCAATG 5 cut(s) 277, 389, 422, 672, 2562
BsrFI RCCGGY 2 cut(s) 308, 2830
BsrGI TGTACA 1 cut(s) 1959
BsrI ACTGG 4 cut(s) 339, 586, 1510, 2639
BssAI RCCGGY 2 cut(s) 308, 2830
BssECI CCNNGG 3 cut(s) 1567, 1632, 2669
BssNI GRCGYC 5 cut(s) 54, 159, 168, 1222, 1525
BssSI CACGAG 1 cut(s) 766
BssT1I CCWWGG 1 cut(s) 1632
Bst2BI CACGAG 1 cut(s) 766
Bst2UI CCWGG 7 cut(s) 749, 1569, 1665, 1878, 2314, 2550, 2671
Bst4CI ACNGT 7 cut(s) 44, 223, 692, 1072, 1559, 1936, 2078
BstACI GRCGYC 5 cut(s) 54, 159, 168, 1222, 1525
BstAUI TGTACA 1 cut(s) 1959
BstBAI YACGTR 2 cut(s) 26, 762
BstBI TTCGAA 1 cut(s) 1431
BstC8I GCNNGC 9 cut(s) 177, 247, 306, 389, 429, 825, 1020, 1226, 2088
BstF5I GGATG 5 cut(s) 639, 643, 757, 1106, 1828
BstH2I RGCGCY 1 cut(s) 362
BstHHI GCGC 2 cut(s) 361, 1011
BstMAI GTCTC 5 cut(s) 148, 210, 2227, 2682, 2686
BstNI CCWGG 7 cut(s) 749, 1569, 1665, 1878, 2314, 2550, 2671
BstNSI RCATGY 1 cut(s) 827
BstPAI GACNNNNGTC 1 cut(s) 140
BstSCI CCNGG 9 cut(s) 114, 179, 747, 1567, 1663, 1876, 2312, 2548, 2669
BstSFI CTRYAG 4 cut(s) 516, 1737, 2700, 2740
BstSLI GKGCMC 3 cut(s) 1672, 1764, 1941
BstSNI TACGTA 1 cut(s) 762
BstV2I GAAGAC 2 cut(s) 181, 1909
BstX2I RGATCY 4 cut(s) 839, 961, 2271, 2442
BstXI CCANNNNNNTGG 3 cut(s) 26, 451, 1772
BstYI RGATCY 4 cut(s) 839, 961, 2271, 2442
Bsu36I CCTNAGG 1 cut(s) 1944
BsuRI GGCC 5 cut(s) 30, 179, 431, 1631, 1815
BtrI CACGTC 1 cut(s) 2804
BtsCI GGATG 5 cut(s) 639, 643, 757, 1106, 1828
BtsI GCAGTG 1 cut(s) 2800
BtsIMutI CAGTG 7 cut(s) 199, 219, 346, 579, 2083, 2646, 2800
Cac8I GCNNGC 9 cut(s) 177, 247, 306, 389, 429, 825, 1020, 1226, 2088
CaiI CAGNNNCTG 1 cut(s) 394
CciI TCATGA 1 cut(s) 700
CfoI GCGC 2 cut(s) 361, 1011
Cfr10I RCCGGY 2 cut(s) 308, 2830
Cfr13I GGNCC 3 cut(s) 178, 601, 1909
CseI GACGC 3 cut(s) 148, 1230, 1533
CsiI ACCWGGT 4 cut(s) 1663, 1876, 2312, 2548
Csp6I GTAC 4 cut(s) 763, 1784, 1949, 1960
CviQI GTAC 4 cut(s) 763, 1784, 1949, 1960
DraI TTTAAA 1 cut(s) 1153
EaeI YGGCCR 2 cut(s) 28, 429
EciI GGCGGA 1 cut(s) 2515
Ecl136II GAGCTC 2 cut(s) 614, 2621
Eco105I TACGTA 1 cut(s) 762
Eco130I CCWWGG 1 cut(s) 1632
Eco24I GRGCYC 2 cut(s) 616, 2623
Eco31I GGTCTC 2 cut(s) 148, 2686
Eco47I GGWCC 2 cut(s) 601, 1909
Eco53kI GAGCTC 2 cut(s) 614, 2621
Eco57I CTGAAG 2 cut(s) 175, 864
Eco72I CACGTG 1 cut(s) 26
Eco81I CCTNAGG 1 cut(s) 1944
EcoICRI GAGCTC 2 cut(s) 614, 2621
EcoO109I RGGNCCY 1 cut(s) 601
EcoRI GAATTC 1 cut(s) 2059
EcoRII CCWGG 7 cut(s) 747, 1567, 1663, 1876, 2312, 2548, 2669
EcoT14I CCWWGG 1 cut(s) 1632
EcoT22I ATGCAT 6 cut(s) 732, 889, 1171, 1548, 2179, 2350
EcoT38I GRGCYC 2 cut(s) 616, 2623
ErhI CCWWGG 1 cut(s) 1632
FaqI GGGAC 2 cut(s) 179, 278
FbaI TGATCA 1 cut(s) 576
FblI GTMKAC 3 cut(s) 57, 2069, 2800
FokI GGATG 5 cut(s) 646, 650, 764, 1113, 1835
FriOI GRGCYC 2 cut(s) 616, 2623
FspBI CTAG 2 cut(s) 1691, 1970
GlaI GCGC 2 cut(s) 360, 1010
GsaI CCCAGC 2 cut(s) 1768, 2376
GsuI CTGGAG 2 cut(s) 438, 1197
HaeII RGCGCY 1 cut(s) 362
HaeIII GGCC 5 cut(s) 30, 179, 431, 1631, 1815
HapII CCGG 8 cut(s) 12, 116, 156, 181, 309, 1046, 1702, 2831
HgaI GACGC 3 cut(s) 148, 1230, 1533
HhaI GCGC 2 cut(s) 361, 1011
Hin1I GRCGYC 5 cut(s) 54, 159, 168, 1222, 1525
Hin6I GCGC 2 cut(s) 359, 1009
HinP1I GCGC 2 cut(s) 359, 1009
HindIII AAGCTT 2 cut(s) 2084, 2111
HpaII CCGG 8 cut(s) 12, 116, 156, 181, 309, 1046, 1702, 2831
HphI GGTGA 9 cut(s) 308, 328, 904, 1583, 1876, 1940, 2522, 2535, 2712
Hpy188I TCNGA 6 cut(s) 844, 959, 1277, 2047, 2135, 2630
Hpy99I CGWCG 5 cut(s) 56, 128, 164, 499, 574
HpyAV CCTTC 5 cut(s) 343, 520, 1514, 2326, 2783
HpyCH4III ACNGT 7 cut(s) 44, 223, 692, 1072, 1559, 1936, 2078
HpyCH4IV ACGT 8 cut(s) 25, 54, 168, 761, 1064, 1187, 1896, 2803
HpySE526I ACGT 8 cut(s) 25, 54, 168, 761, 1064, 1187, 1896, 2803
Hsp92I GRCGYC 5 cut(s) 54, 159, 168, 1222, 1525
HspAI GCGC 2 cut(s) 359, 1009
Ksp22I TGATCA 1 cut(s) 576
LweI GCATC 6 cut(s) 694, 1312, 2215, 2386, 2617, 2695
MabI ACCWGGT 4 cut(s) 1663, 1876, 2312, 2548
MaeI CTAG 2 cut(s) 1691, 1970
MaeII ACGT 8 cut(s) 25, 54, 168, 761, 1064, 1187, 1896, 2803
MaeIII GTNAC 3 cut(s) 169, 293, 892
MbiI CCGCTC 1 cut(s) 205
MfeI CAATTG 1 cut(s) 405
MflI RGATCY 4 cut(s) 839, 961, 2271, 2442
MhlI GDGCHC 5 cut(s) 616, 1672, 1764, 1941, 2623
MlsI TGGCCA 2 cut(s) 30, 431
MluNI TGGCCA 2 cut(s) 30, 431
MlyI GAGTC 8 cut(s) 130, 195, 850, 1544, 1699, 1740, 2051, 2229
MmeI TCCRAC 4 cut(s) 1255, 1422, 1868, 2306
Mox20I TGGCCA 2 cut(s) 30, 431
Mph1103I ATGCAT 6 cut(s) 732, 889, 1171, 1548, 2179, 2350
MscI TGGCCA 2 cut(s) 30, 431
MslI CAYNNNNRTG 8 cut(s) 24, 321, 341, 437, 1404, 1675, 2261, 2432
Msp20I TGGCCA 2 cut(s) 30, 431
MspA1I CMGCKG 3 cut(s) 394, 622, 820
MspI CCGG 8 cut(s) 12, 116, 156, 181, 309, 1046, 1702, 2831
MspR9I CCNGG 9 cut(s) 116, 181, 749, 1569, 1665, 1878, 2314, 2550, 2671
MunI CAATTG 1 cut(s) 405
Mva1269I GAATGC 4 cut(s) 667, 982, 1011, 1378
MvaI CCWGG 7 cut(s) 749, 1569, 1665, 1878, 2314, 2550, 2671
NciI CCSGG 2 cut(s) 116, 181
NlaIV GGNNCC 4 cut(s) 1761, 1777, 2125, 2560
NmeAIII GCCGAG 2 cut(s) 125, 595
NmuCI GTSAC 3 cut(s) 169, 293, 892
NsiI ATGCAT 6 cut(s) 732, 889, 1171, 1548, 2179, 2350
NspI RCATGY 1 cut(s) 827
NspV TTCGAA 1 cut(s) 1431
OliI CACNNNNGTG 3 cut(s) 24, 341, 437
PaeI GCATGC 1 cut(s) 827
PagI TCATGA 1 cut(s) 700
PcsI WCGNNNNNNNCGW 1 cut(s) 569
PctI GAATGC 4 cut(s) 667, 982, 1011, 1378
PfeI GAWTC 6 cut(s) 742, 1259, 1358, 2146, 2644, 2813
PflFI GACNNNGTC 1 cut(s) 122
PflMI CCANNNNNTGG 1 cut(s) 2555
PleI GAGTC 8 cut(s) 130, 194, 850, 1544, 1699, 1740, 2050, 2229
PmaCI CACGTG 1 cut(s) 26
PmlI CACGTG 1 cut(s) 26
PpsI GAGTC 8 cut(s) 130, 194, 850, 1544, 1699, 1740, 2050, 2229
Ppu21I YACGTR 2 cut(s) 26, 762
PpuMI RGGWCCY 1 cut(s) 601
PshAI GACNNNNGTC 1 cut(s) 140
PshBI ATTAAT 1 cut(s) 2343
Psp124BI GAGCTC 2 cut(s) 616, 2623
Psp5II RGGWCCY 1 cut(s) 601
Psp6I CCWGG 7 cut(s) 747, 1567, 1663, 1876, 2312, 2548, 2669
PspCI CACGTG 1 cut(s) 26
PspFI CCCAGC 2 cut(s) 1764, 2372
PspGI CCWGG 7 cut(s) 747, 1567, 1663, 1876, 2312, 2548, 2669
PspN4I GGNNCC 4 cut(s) 1761, 1777, 2125, 2560
PspPI GGNCC 3 cut(s) 178, 601, 1909
PspPPI RGGWCCY 1 cut(s) 601
PstI CTGCAG 3 cut(s) 520, 1741, 2704
PstNI CAGNNNCTG 1 cut(s) 394
PsuI RGATCY 4 cut(s) 839, 961, 2271, 2442
PsyI GACNNNGTC 1 cut(s) 122
PvuII CAGCTG 3 cut(s) 394, 622, 820
RsaI GTAC 4 cut(s) 764, 1785, 1950, 1961
RsaNI GTAC 4 cut(s) 763, 1784, 1949, 1960
RseI CAYNNNNRTG 8 cut(s) 24, 321, 341, 437, 1404, 1675, 2261, 2432
SacI GAGCTC 2 cut(s) 616, 2623
Sau96I GGNCC 3 cut(s) 178, 601, 1909
SchI GAGTC 8 cut(s) 130, 195, 850, 1544, 1699, 1740, 2051, 2229
ScrFI CCNGG 9 cut(s) 116, 181, 749, 1569, 1665, 1878, 2314, 2550, 2671
SduI GDGCHC 5 cut(s) 616, 1672, 1764, 1941, 2623
SexAI ACCWGGT 4 cut(s) 1663, 1876, 2312, 2548
SfaNI GCATC 6 cut(s) 694, 1312, 2215, 2386, 2617, 2695
SfcI CTRYAG 4 cut(s) 516, 1737, 2700, 2740
SfuI TTCGAA 1 cut(s) 1431
SinI GGWCC 2 cut(s) 601, 1909
SmiMI CAYNNNNRTG 8 cut(s) 24, 321, 341, 437, 1404, 1675, 2261, 2432
SmlI CTYRAG 2 cut(s) 2237, 2408
SmoI CTYRAG 2 cut(s) 2237, 2408
SnaBI TACGTA 1 cut(s) 762
SphI GCATGC 1 cut(s) 827
SsiI CCGC 4 cut(s) 203, 276, 912, 2500
SspI AATATT 1 cut(s) 984
SspMI CTAG 2 cut(s) 1691, 1970
SstI GAGCTC 2 cut(s) 616, 2623
StyD4I CCNGG 9 cut(s) 114, 179, 747, 1567, 1663, 1876, 2312, 2548, 2669
StyI CCWWGG 1 cut(s) 1632
TaaI ACNGT 7 cut(s) 44, 223, 692, 1072, 1559, 1936, 2078
TaiI ACGT 8 cut(s) 28, 57, 171, 764, 1067, 1190, 1899, 2806
TaqI TCGA 7 cut(s) 51, 99, 1035, 1431, 1793, 2192, 2526
TatI WGTACW 2 cut(s) 1783, 1959
TauI GCSGC 1 cut(s) 278
TfiI GAWTC 6 cut(s) 742, 1259, 1358, 2146, 2644, 2813
TscAI CASTG 7 cut(s) 199, 226, 346, 586, 2083, 2646, 2800
TseFI GTSAC 3 cut(s) 169, 293, 892
Tsp45I GTSAC 3 cut(s) 169, 293, 892
TspDTI ATGAA 8 cut(s) 552, 654, 717, 939, 1133, 2123, 2766, 2802
TspGWI ACGGA 1 cut(s) 1351
TspRI CASTG 7 cut(s) 199, 226, 346, 586, 2083, 2646, 2800
Tth111I GACNNNGTC 1 cut(s) 122
Van91I CCANNNNNTGG 1 cut(s) 2555
VneI GTGCAC 2 cut(s) 1668, 1937
VpaK11BI GGWCC 2 cut(s) 601, 1909
VspI ATTAAT 1 cut(s) 2343
XapI RAATTY 4 cut(s) 105, 1279, 2059, 2771
XbaI TCTAGA 1 cut(s) 1969
XceI RCATGY 1 cut(s) 827
XcmI CCANNNNNNNNNTGG 1 cut(s) 136
XmiI GTMKAC 3 cut(s) 57, 2069, 2800
XspI CTAG 2 cut(s) 1691, 1970
ZraI GACGTC 2 cut(s) 55, 169
Zsp2I ATGCAT 6 cut(s) 732, 889, 1171, 1548, 2179, 2350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.