Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000941

Physical Location & Seq

Genomic Coordinates Reverse (-)

30820094 .. 30822831

Gene Structure 2738 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g38980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGCTCAGCCGGCTGACATAACCACGGGGTCGTCGGAGCAGTACCAGCCGCTACTCCTTAGACTTAACTCACATTCCCGGATTCCTGACTTGTCATCCGCCGCGGTTGAGGAGTTTCTGGAGCAAAGGCCTATAGCACTGAGGTGGTGGCCTAGGCTAGTTGCATGGGAGTCCAGGCTGCTATGGATTTTATCCAGTTCGTCTATTGTGGTTTCAATTTTCAATTACATGCTCACCTTTGTCACACTCATGTTTTGTGGCCATCTGGGTGCATTGGAGCTTGCTGGAGCCTCTATTGCAAGTGTGGGAATCCAAGGCCTTGCTTTTGGGATTATGTTGGGCATGGCGAGTGCTGTACAAACTGTATGTGGGCAAGCCTATGGAGCCAAACACTTGGGAGCAATGGGGATCATATGCCAAAGAGCAATCATCTTGCACTTGGGAGCAGCAATCCTCCTTACATTTTTGTACTGGTGGTCAGGTCCAATACTAGTGGCCATGGGCCAAACTGAAAGCATAGCAGAACAGGGTCAAATCTATGCCCGCGGCTTAATCCCTCAACTCTATGCATTTGCCATAAACTGCCCTCAACGGAGGTTCCTTCAGGCACAGAAAATAGTGCACCCTTTGGCATACATGTCCATTGGAGTTTTCCTCCTCCACACTCTTCTCACTTGGTTGGTGGTTTACGTTGTGGACTATGGACTAATAGGTGCTTCTCTTACACTGAGTTTTTCTTGGTGGTTGCTTGTGATTACGTTTGGGATTTACATTCTAGTAAGCCCCAACTGCAAGGAAACTTGGACTGGTTTCTCATGGAAAGCCTTTTCCGGAATTTGGCCTTATTTTAAGCTCACTCTTGCTTCTGCTATCATGTTGTGTTTGGAGATTTGGTACAATCAAGGGTTAGTGCTTATATCAGGGCTCCTAGCCAACCCTACAATTTCACTGGACTCCATATCTATCTGCATGAACTACTTGAACTGGGACATGCAGTTTATGCTAGGCCTTGCTGCTGCTGCAAGTGTTCGAGTGAGTAATGAGCTAGGTGCTGGTCATCCAAAGGTGGCCAAATTTTCGGTGTTTGTAGTGAATGGTACCAGCATCCTAATTAGCATAGTGTTCAGTGCTATTGTGCTAATATTCAAAGCTGGATTGAGCAGGCTATTTACGAGTGATGCCGAGGTTATTGAGGCAGTGTCTAATTTGACCCCCTTGCTAGCCATTTCTGTTTTCCTGAATGGCATTCAACCTATACTCTCAGGTGTTGCAATTGGAAGTGGATGGCAAGGTGTTGTAGCTTATGTGAATCTGACTTGTTACTATATTATCGGTCTTCCAATAGGGTGTGTTCTTGCCTTCAAAACTAGTATGGGAGTAGCAGGTATTTGGTGGGGGATGATTATTGGAGTATTTTTGCAGACAGCAACTCTAATTGTTCTCACTGCCAGAACCAATTGGGATGCTCAGGTTGTAAATGCAGCTGAGAGAGTGAAGAAATCTGCAAGTGTAGAGCACTTGCTCTTGGAGGAAGACGACGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0015075 GO:0015077 GO:0015078 GO:0015238 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015672 GO:0015893 GO:0016020 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0021700 GO:0022414 GO:0022611 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0032501 GO:0032502 GO:0032504 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071695 GO:0071704 GO:0097437 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

515

Amino Acids

56.05

Weight (kDa)

6.7

Isoelectric Point (pI)

26.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	68 - 227	3.4e-30	MatE
MatE	PF01554	289 - 449	4.9e-26	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59030 AT3G59030
fragaria_vesca	FvH4_2g14370 FvH4_2g14370 FvH4_2g26470 FvH4_2g26470 FvH4_2g26470 FvH4_6g37810 FvH4_6g38980 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010
malus_domestica	MD09G1145600.v1.1 MD17G1131800.v1.1 MD17G1132100.v1.1
prunus_persica	Prupe.3G180200_v2.0.a1 Prupe.3G180400_v2.0.a1 Prupe.3G180900_v2.0.a1
pyrus_communis	pycom09g06590 pycom17g12460 pycom17g12550
rosa_chinensis	RchiOBHm_Chr2g0152571 RchiOBHm_Chr2g0152611 RchiOBHm_Chr6g0295151
rosa_laevigata	RLG00000011817 RLG00000013373 RLG00000020516 RLG00000020647 RLG00000020650
rosa_multiflora	Rmu_co8487657.1_g000001 Rmu_sc0000185.1_g000024 Rmu_ssc0000233.1_g000025
rosa_roxburghii	Rroxscaffold_171G00441390 Rroxscaffold_2G00095540 Rroxscaffold_2G00096850 Rroxscaffold_7G00172690 Rroxscaffold_7G00192070
rosa_rugosa	Rorug02G0423200 Rorug02G0434600 Rorug02G0434900 Rorug02G0434900 Rorug06G0249500
rosa_samantha	Rh2AG483600 Rh2AG495900 Rh2AG496600 Rh2BG495900 Rh2BG507700 Rh2BG508200 Rh2CG469800 Rh2CG482100 Rh2CG482600 Rh2DG506900 Rh2DG519800 Rh6AG362500 Rh6CG221100 Rh6DG363300
rosa_wichuraiana	Rw0G004840 Rw2G039630 Rw2G040800 Rw2G040840 Rw2G041230 Rw2G041260 Rw6G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1373
Acc65I	GGTACC	1 cut(s)	1097
AccB1I	GGYRCC	1 cut(s)	1097
AccII	CGCG	2 cut(s)	104, 546
AccIII	TCCGGA	1 cut(s)	830
AciI	CCGC	6 cut(s)	50, 99, 102, 104, 544, 546
AclWI	GGATC	1 cut(s)	416
AcoI	YGGCCR	3 cut(s)	259, 495, 1068
AcsI	RAATTY	2 cut(s)	834, 1073
AcuI	CTGAAG	1 cut(s)	587
AfaI	GTAC	5 cut(s)	44, 357, 470, 896, 1099
AfiI	CCNNNNNNNGG	1 cut(s)	837
AflIII	ACRYGT	1 cut(s)	636
AgsI	TTSAA	6 cut(s)	216, 223, 982, 1147, 1250, 1363
AhlI	ACTAGT	2 cut(s)	490, 1367
AjnI	CCWGG	1 cut(s)	173
AleI	CACNNNNGTG	1 cut(s)	142
AluBI	AGCT	6 cut(s)	280, 853, 1045, 1151, 1301, 1484
AluI	AGCT	6 cut(s)	280, 853, 1045, 1151, 1301, 1484
Alw21I	GWGCWC	2 cut(s)	624, 1518
Alw44I	GTGCAC	1 cut(s)	620
AlwI	GGATC	1 cut(s)	416
Aor13HI	TCCGGA	1 cut(s)	830
AoxI	GGCC	9 cut(s)	128, 149, 259, 316, 495, 502, 839, 1006, 1068
ApaLI	GTGCAC	1 cut(s)	620
ApeKI	GCWGC	6 cut(s)	178, 446, 1013, 1016, 1019, 1481
ApoI	RAATTY	2 cut(s)	834, 1073
Asp718I	GGTACC	1 cut(s)	1097
AspA2I	CCTAGG	1 cut(s)	152
AspS9I	GGNCC	2 cut(s)	482, 502
AsuC2I	CCSGG	1 cut(s)	79
AsuHPI	GGTGA	1 cut(s)	226
AsuNHI	GCTAGC	1 cut(s)	1219
AvaII	GGWCC	1 cut(s)	482
AvrII	CCTAGG	1 cut(s)	152
BaeGI	GKGCMC	1 cut(s)	624
BalI	TGGCCA	3 cut(s)	261, 497, 1070
BanI	GGYRCC	1 cut(s)	1097
BanII	GRGCYC	1 cut(s)	927
BbsI	GAAGAC	2 cut(s)	1328, 1539
Bbv12I	GWGCWC	2 cut(s)	624, 1518
BbvI	GCAGC	6 cut(s)	165, 458, 1000, 1003, 1006, 1493
BccI	CCATC	2 cut(s)	270, 1278
BciT130I	CCWGG	1 cut(s)	175
BcnI	CCSGG	1 cut(s)	79
BcuI	ACTAGT	2 cut(s)	490, 1367
BfaI	CTAG	9 cut(s)	153, 158, 491, 776, 929, 1004, 1046, 1220, 1368
BfmI	CTRYAG	1 cut(s)	132
BfuAI	ACCTGC	1 cut(s)	1373
BisI	GCNGC	9 cut(s)	50, 102, 179, 447, 547, 1014, 1017, 1020, 1482
BlnI	CCTAGG	1 cut(s)	152
BlpI	GCTNAGC	1 cut(s)	6
BlsI	GCNGC	9 cut(s)	51, 103, 180, 448, 548, 1015, 1018, 1021, 1483
Bme1390I	CCNGG	2 cut(s)	79, 175
Bme18I	GGWCC	1 cut(s)	482
BmgT120I	GGNCC	2 cut(s)	482, 502
BmiI	GGNNCC	5 cut(s)	289, 385, 599, 926, 1099
BmrFI	CCNGG	2 cut(s)	79, 175
BmrI	ACTGGG	1 cut(s)	994
BmsI	GCATC	3 cut(s)	1113, 1168, 1453
BmtI	GCTAGC	1 cut(s)	1223
BmuI	ACTGGG	1 cut(s)	994
BpiI	GAAGAC	2 cut(s)	1328, 1539
BplI	GAGNNNNNCTC	2 cut(s)	639, 671
BpmI	CTGGAG	2 cut(s)	140, 306
Bpu10I	CCTNAGC	1 cut(s)	1467
Bpu1102I	GCTNAGC	1 cut(s)	6
BpuMI	CCSGG	1 cut(s)	79
BsaJI	CCNNGG	7 cut(s)	24, 102, 152, 313, 498, 544, 1182
BsaWI	WCCGGW	1 cut(s)	830
BsaXI	ACNNNNNCTCC	2 cut(s)	878, 908
Bsc4I	CCNNNNNNNGG	1 cut(s)	837
Bse118I	RCCGGY	1 cut(s)	10
Bse1I	ACTGG	5 cut(s)	195, 476, 811, 954, 989
Bse3DI	GCAATG	1 cut(s)	408
BseAI	TCCGGA	1 cut(s)	830
BseBI	CCWGG	1 cut(s)	175
BseDI	CCNNGG	7 cut(s)	24, 102, 152, 313, 498, 544, 1182
BseGI	GGATG	6 cut(s)	95, 1057, 1104, 1289, 1404, 1468
BseLI	CCNNNNNNNGG	1 cut(s)	837
BseMI	GCAATG	1 cut(s)	408
BseMII	CTCAG	6 cut(s)	20, 131, 719, 1275, 1476, 1481
BseNI	ACTGG	5 cut(s)	195, 476, 811, 954, 989
BseRI	GAGGAG	2 cut(s)	125, 647
BseSI	GKGCMC	1 cut(s)	624
BseXI	GCAGC	6 cut(s)	165, 458, 1000, 1003, 1006, 1493
Bsh1236I	CGCG	2 cut(s)	104, 546
BshFI	GGCC	9 cut(s)	130, 151, 261, 318, 497, 504, 841, 1008, 1070
BshNI	GGYRCC	1 cut(s)	1097
BsiHKAI	GWGCWC	2 cut(s)	624, 1518
BsiSI	CCGG	3 cut(s)	11, 79, 831
BslFI	GGGAC	1 cut(s)	1001
BslI	CCNNNNNNNGG	1 cut(s)	837
BsmFI	GGGAC	1 cut(s)	1001
BsmI	GAATGC	1 cut(s)	1245
BsnI	GGCC	9 cut(s)	130, 151, 261, 318, 497, 504, 841, 1008, 1070
Bsp1286I	GDGCHC	3 cut(s)	624, 927, 1518
Bsp13I	TCCGGA	1 cut(s)	830
Bsp1407I	TGTACA	1 cut(s)	355
Bsp143I	GATC	1 cut(s)	408
Bsp1720I	GCTNAGC	1 cut(s)	6
Bsp19I	CCATGG	1 cut(s)	498
BspACI	CCGC	6 cut(s)	50, 99, 102, 104, 544, 546
BspANI	GGCC	9 cut(s)	130, 151, 261, 318, 497, 504, 841, 1008, 1070
BspCNI	CTCAG	6 cut(s)	19, 132, 720, 1274, 1477, 1480
BspEI	TCCGGA	1 cut(s)	830
BspFNI	CGCG	2 cut(s)	104, 546
BspLI	GGNNCC	5 cut(s)	289, 385, 599, 926, 1099
BspMI	ACCTGC	1 cut(s)	1373
BspOI	GCTAGC	1 cut(s)	1223
BspPI	GGATC	1 cut(s)	416
BspT107I	GGYRCC	1 cut(s)	1097
BsrDI	GCAATG	1 cut(s)	408
BsrFI	RCCGGY	1 cut(s)	10
BsrGI	TGTACA	1 cut(s)	355
BsrI	ACTGG	5 cut(s)	195, 476, 811, 954, 989
BssAI	RCCGGY	1 cut(s)	10
BssECI	CCNNGG	7 cut(s)	24, 102, 152, 313, 498, 544, 1182
BssMI	GATC	1 cut(s)	408
BssT1I	CCWWGG	3 cut(s)	152, 313, 498
Bst2UI	CCWGG	1 cut(s)	175
Bst4CI	ACNGT	1 cut(s)	364
Bst6I	CTCTTC	1 cut(s)	672
BstAPI	GCANNNNNTGC	1 cut(s)	1000
BstAUI	TGTACA	1 cut(s)	355
BstC8I	GCNNGC	6 cut(s)	12, 282, 375, 544, 1163, 1221
BstDEI	CTNAG	7 cut(s)	6, 59, 140, 728, 1261, 1467, 1485
BstDSI	CCRYGG	4 cut(s)	24, 102, 498, 544
BstF5I	GGATG	6 cut(s)	95, 1057, 1104, 1289, 1404, 1468
BstFNI	CGCG	2 cut(s)	104, 546
BstKTI	GATC	1 cut(s)	411
BstMBI	GATC	1 cut(s)	408
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 46, 296, 383, 789, 1000, 1019
BstNI	CCWGG	1 cut(s)	175
BstNSI	RCATGY	3 cut(s)	232, 640, 994
BstSCI	CCNGG	2 cut(s)	77, 173
BstSFI	CTRYAG	1 cut(s)	132
BstSLI	GKGCMC	1 cut(s)	624
BstUI	CGCG	2 cut(s)	104, 546
BstV1I	GCAGC	6 cut(s)	165, 458, 1000, 1003, 1006, 1493
BstV2I	GAAGAC	2 cut(s)	1328, 1539
BstXI	CCANNNNNNTGG	1 cut(s)	394
BsuRI	GGCC	9 cut(s)	130, 151, 261, 318, 497, 504, 841, 1008, 1070
BtgI	CCRYGG	4 cut(s)	24, 102, 498, 544
BtsCI	GGATG	6 cut(s)	95, 1057, 1104, 1289, 1404, 1468
BtsI	GCAGTG	2 cut(s)	1203, 1443
BtsIMutI	CAGTG	6 cut(s)	137, 725, 947, 1132, 1203, 1443
BveI	ACCTGC	1 cut(s)	1373
Cac8I	GCNNGC	6 cut(s)	12, 282, 375, 544, 1163, 1221
Cfr10I	RCCGGY	1 cut(s)	10
Cfr13I	GGNCC	2 cut(s)	482, 502
Cfr42I	CCGCGG	2 cut(s)	105, 547
Csp6I	GTAC	5 cut(s)	43, 356, 469, 895, 1098
CspCI	CAANNNNNGTGG	2 cut(s)	474, 509
CviQI	GTAC	5 cut(s)	43, 356, 469, 895, 1098
DdeI	CTNAG	7 cut(s)	6, 59, 140, 728, 1261, 1467, 1485
DpnI	GATC	1 cut(s)	410
DpnII	GATC	1 cut(s)	408
EaeI	YGGCCR	3 cut(s)	259, 495, 1068
Eam1104I	CTCTTC	1 cut(s)	672
EarI	CTCTTC	1 cut(s)	672
EciI	GGCGGA	1 cut(s)	88
Eco130I	CCWWGG	3 cut(s)	152, 313, 498
Eco147I	AGGCCT	3 cut(s)	130, 318, 1008
Eco24I	GRGCYC	1 cut(s)	927
Eco47I	GGWCC	1 cut(s)	482
Eco57I	CTGAAG	1 cut(s)	587
EcoRII	CCWGG	1 cut(s)	173
EcoT14I	CCWWGG	3 cut(s)	152, 313, 498
EcoT22I	ATGCAT	1 cut(s)	571
EcoT38I	GRGCYC	1 cut(s)	927
ErhI	CCWWGG	3 cut(s)	152, 313, 498
FaqI	GGGAC	1 cut(s)	1001
FauI	CCCGC	1 cut(s)	551
FauNDI	CATATG	1 cut(s)	413
Fnu4HI	GCNGC	9 cut(s)	50, 102, 179, 447, 547, 1014, 1017, 1020, 1482
FokI	GGATG	6 cut(s)	82, 1044, 1091, 1296, 1411, 1475
FriOI	GRGCYC	1 cut(s)	927
Fsp4HI	GCNGC	9 cut(s)	50, 102, 179, 447, 547, 1014, 1017, 1020, 1482
FspBI	CTAG	9 cut(s)	153, 158, 491, 776, 929, 1004, 1046, 1220, 1368
GluI	GCNGC	9 cut(s)	50, 102, 179, 447, 547, 1014, 1017, 1020, 1482
GsuI	CTGGAG	2 cut(s)	140, 306
HaeIII	GGCC	9 cut(s)	130, 151, 261, 318, 497, 504, 841, 1008, 1070
HapII	CCGG	3 cut(s)	11, 79, 831
HinfI	GANTC	5 cut(s)	82, 170, 309, 953, 1309
HpaII	CCGG	3 cut(s)	11, 79, 831
HphI	GGTGA	1 cut(s)	226
Hpy166II	GTNNAC	3 cut(s)	622, 688, 697
Hpy188I	TCNGA	2 cut(s)	37, 1314
Hpy188III	TCNNGA	4 cut(s)	86, 119, 831, 1237
Hpy8I	GTNNAC	3 cut(s)	622, 688, 697
Hpy99I	CGWCG	2 cut(s)	37, 1541
HpyAV	CCTTC	2 cut(s)	611, 1369
HpyCH4III	ACNGT	1 cut(s)	364
HpyCH4IV	ACGT	3 cut(s)	690, 758, 1539
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 46, 296, 383, 789, 1000, 1019
HpyF3I	CTNAG	7 cut(s)	6, 59, 140, 728, 1261, 1467, 1485
HpySE526I	ACGT	3 cut(s)	690, 758, 1539
Kpn2I	TCCGGA	1 cut(s)	830
KpnI	GGTACC	1 cut(s)	1101
KroI	GCCGGC	1 cut(s)	10
KroNI	GCCGGC	1 cut(s)	12
KspI	CCGCGG	2 cut(s)	105, 547
Kzo9I	GATC	1 cut(s)	408
LmnI	GCTCC	8 cut(s)	37, 121, 277, 287, 383, 398, 443, 930
Lsp1109I	GCAGC	6 cut(s)	165, 458, 1000, 1003, 1006, 1493
LweI	GCATC	3 cut(s)	1113, 1168, 1453
MaeI	CTAG	9 cut(s)	153, 158, 491, 776, 929, 1004, 1046, 1220, 1368
MaeII	ACGT	3 cut(s)	690, 758, 1539
MaeIII	GTNAC	2 cut(s)	241, 1319
MalI	GATC	1 cut(s)	410
MboI	GATC	1 cut(s)	408
MboII	GAAGA	4 cut(s)	659, 1328, 1507, 1544
MfeI	CAATTG	2 cut(s)	1272, 1456
MhlI	GDGCHC	3 cut(s)	624, 927, 1518
MlsI	TGGCCA	3 cut(s)	261, 497, 1070
MluNI	TGGCCA	3 cut(s)	261, 497, 1070
MlyI	GAGTC	2 cut(s)	179, 947
MmeI	TCCRAC	1 cut(s)	15
Mox20I	TGGCCA	3 cut(s)	261, 497, 1070
Mph1103I	ATGCAT	1 cut(s)	571
MroI	TCCGGA	1 cut(s)	830
MroNI	GCCGGC	1 cut(s)	10
MscI	TGGCCA	3 cut(s)	261, 497, 1070
MseI	TTAA	3 cut(s)	66, 551, 849
MslI	CAYNNNNRTG	3 cut(s)	142, 248, 267
Msp20I	TGGCCA	3 cut(s)	261, 497, 1070
MspA1I	CMGCKG	3 cut(s)	104, 546, 1484
MspI	CCGG	3 cut(s)	11, 79, 831
MspR9I	CCNGG	2 cut(s)	79, 175
MunI	CAATTG	2 cut(s)	1272, 1456
Mva1269I	GAATGC	1 cut(s)	1245
MvaI	CCWGG	1 cut(s)	175
MvnI	CGCG	2 cut(s)	104, 546
MwoI	GCNNNNNNNGC	7 cut(s)	11, 46, 296, 383, 789, 1000, 1019
NaeI	GCCGGC	1 cut(s)	12
NciI	CCSGG	1 cut(s)	79
NcoI	CCATGG	1 cut(s)	498
NdeI	CATATG	1 cut(s)	413
NdeII	GATC	1 cut(s)	408
NgoMIV	GCCGGC	1 cut(s)	10
NheI	GCTAGC	1 cut(s)	1219
NlaIV	GGNNCC	5 cut(s)	289, 385, 599, 926, 1099
NmeAIII	GCCGAG	1 cut(s)	1207
NmuCI	GTSAC	1 cut(s)	241
NsiI	ATGCAT	1 cut(s)	571
NspI	RCATGY	3 cut(s)	232, 640, 994
OliI	CACNNNNGTG	1 cut(s)	142
PceI	AGGCCT	3 cut(s)	130, 318, 1008
PciI	ACATGT	1 cut(s)	636
PctI	GAATGC	1 cut(s)	1245
PdiI	GCCGGC	1 cut(s)	12
PfeI	GAWTC	3 cut(s)	82, 309, 1309
PfoI	TCCNGGA	1 cut(s)	77
PkrI	GCNGC	9 cut(s)	51, 103, 180, 448, 548, 1015, 1018, 1021, 1483
PleI	GAGTC	2 cut(s)	178, 947
PpsI	GAGTC	2 cut(s)	178, 947
PscI	ACATGT	1 cut(s)	636
Psp6I	CCWGG	1 cut(s)	173
PspGI	CCWGG	1 cut(s)	173
PspN4I	GGNNCC	5 cut(s)	289, 385, 599, 926, 1099
PspPI	GGNCC	2 cut(s)	482, 502
PvuII	CAGCTG	1 cut(s)	1484
RsaI	GTAC	5 cut(s)	44, 357, 470, 896, 1099
RsaNI	GTAC	5 cut(s)	43, 356, 469, 895, 1098
RseI	CAYNNNNRTG	3 cut(s)	142, 248, 267
SacII	CCGCGG	2 cut(s)	105, 547
SaqAI	TTAA	3 cut(s)	66, 551, 849
SatI	GCNGC	9 cut(s)	50, 102, 179, 447, 547, 1014, 1017, 1020, 1482
Sau3AI	GATC	1 cut(s)	408
Sau96I	GGNCC	2 cut(s)	482, 502
SchI	GAGTC	2 cut(s)	179, 947
ScrFI	CCNGG	2 cut(s)	79, 175
SduI	GDGCHC	3 cut(s)	624, 927, 1518
SfaNI	GCATC	3 cut(s)	1113, 1168, 1453
SfcI	CTRYAG	1 cut(s)	132
Sfr303I	CCGCGG	2 cut(s)	105, 547
SgrBI	CCGCGG	2 cut(s)	105, 547
SinI	GGWCC	1 cut(s)	482
SmiMI	CAYNNNNRTG	3 cut(s)	142, 248, 267
SpeI	ACTAGT	2 cut(s)	490, 1367
SseBI	AGGCCT	3 cut(s)	130, 318, 1008
SsiI	CCGC	6 cut(s)	50, 99, 102, 104, 544, 546
SspI	AATATT	1 cut(s)	1143
SspMI	CTAG	9 cut(s)	153, 158, 491, 776, 929, 1004, 1046, 1220, 1368
StuI	AGGCCT	3 cut(s)	130, 318, 1008
StyD4I	CCNGG	2 cut(s)	77, 173
StyI	CCWWGG	3 cut(s)	152, 313, 498
TaaI	ACNGT	1 cut(s)	364
TaiI	ACGT	3 cut(s)	693, 761, 1542
TaqI	TCGA	1 cut(s)	1030
TaqII	GACCGA	1 cut(s)	1322
TatI	WGTACW	2 cut(s)	355, 468
TauI	GCSGC	3 cut(s)	52, 104, 549
TfiI	GAWTC	3 cut(s)	82, 309, 1309
Tru1I	TTAA	3 cut(s)	66, 551, 849
Tru9I	TTAA	3 cut(s)	66, 551, 849
TscAI	CASTG	6 cut(s)	144, 732, 954, 1132, 1203, 1450
TseFI	GTSAC	1 cut(s)	241
TseI	GCWGC	6 cut(s)	178, 446, 1013, 1016, 1019, 1481
Tsp45I	GTSAC	1 cut(s)	241
TspDTI	ATGAA	1 cut(s)	986
TspGWI	ACGGA	1 cut(s)	607
TspRI	CASTG	6 cut(s)	144, 732, 954, 1132, 1203, 1450
VneI	GTGCAC	1 cut(s)	620
VpaK11BI	GGWCC	1 cut(s)	482
XapI	RAATTY	2 cut(s)	834, 1073
XceI	RCATGY	3 cut(s)	232, 640, 994
XmaJI	CCTAGG	1 cut(s)	152
XspI	CTAG	9 cut(s)	153, 158, 491, 776, 929, 1004, 1046, 1220, 1368
Zsp2I	ATGCAT	1 cut(s)	571

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.