Protein TRANSPARENT TESTA 12-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1346 |
| AccII | CGCG | 3 cut(s) | 517, 519, 1454 |
| AciI | CCGC | 4 cut(s) | 23, 72, 519, 1454 |
| AcoI | YGGCCR | 2 cut(s) | 232, 1041 |
| AcsI | RAATTY | 3 cut(s) | 86, 807, 1046 |
| AcuI | CTGAAG | 1 cut(s) | 560 |
| AcyI | GRCGYC | 1 cut(s) | 1152 |
| AfaI | GTAC | 4 cut(s) | 17, 330, 443, 869 |
| AflIII | ACRYGT | 1 cut(s) | 609 |
| AgsI | TTSAA | 8 cut(s) | 83, 196, 955, 1120, 1213, 1223, 1336, 1468 |
| AhlI | ACTAGT | 1 cut(s) | 1340 |
| AleI | CACNNNNGTG | 1 cut(s) | 115 |
| AluBI | AGCT | 7 cut(s) | 210, 253, 826, 1018, 1138, 1265, 1274 |
| AluI | AGCT | 7 cut(s) | 210, 253, 826, 1018, 1138, 1265, 1274 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1175 |
| AoxI | GGCC | 6 cut(s) | 101, 122, 232, 812, 979, 1041 |
| ApeKI | GCWGC | 6 cut(s) | 151, 419, 689, 986, 989, 992 |
| ApoI | RAATTY | 3 cut(s) | 86, 807, 1046 |
| AspA2I | CCTAGG | 1 cut(s) | 125 |
| AspLEI | GCGC | 2 cut(s) | 517, 519 |
| AspS9I | GGNCC | 3 cut(s) | 35, 455, 1071 |
| AsuC2I | CCSGG | 1 cut(s) | 52 |
| AsuNHI | GCTAGC | 1 cut(s) | 1192 |
| AvaII | GGWCC | 3 cut(s) | 35, 455, 1071 |
| AvrII | CCTAGG | 1 cut(s) | 125 |
| BalI | TGGCCA | 2 cut(s) | 234, 1043 |
| BanII | GRGCYC | 1 cut(s) | 900 |
| BbsI | GAAGAC | 1 cut(s) | 1301 |
| BbvCI | CCTCAGC | 1 cut(s) | 1440 |
| BbvI | GCAGC | 6 cut(s) | 138, 431, 676, 973, 976, 1004 |
| BccI | CCATC | 4 cut(s) | 243, 851, 1205, 1251 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 126, 160 |
| BcnI | CCSGG | 1 cut(s) | 52 |
| BcuI | ACTAGT | 1 cut(s) | 1340 |
| BfaI | CTAG | 7 cut(s) | 126, 131, 902, 977, 1019, 1193, 1341 |
| BfmI | CTRYAG | 2 cut(s) | 105, 990 |
| BfuAI | ACCTGC | 1 cut(s) | 1346 |
| BglII | AGATCT | 2 cut(s) | 507, 1472 |
| BisI | GCNGC | 9 cut(s) | 23, 152, 420, 520, 690, 987, 990, 993, 1455 |
| BlnI | CCTAGG | 1 cut(s) | 125 |
| BlpI | GCTNAGC | 1 cut(s) | 206 |
| BlsI | GCNGC | 9 cut(s) | 24, 153, 421, 521, 691, 988, 991, 994, 1456 |
| Bme1390I | CCNGG | 1 cut(s) | 52 |
| Bme18I | GGWCC | 3 cut(s) | 35, 455, 1071 |
| BmgT120I | GGNCC | 3 cut(s) | 35, 455, 1071 |
| BmiI | GGNNCC | 5 cut(s) | 262, 358, 572, 899, 1072 |
| BmrFI | CCNGG | 1 cut(s) | 52 |
| BmrI | ACTGGG | 2 cut(s) | 967, 1441 |
| BmsI | GCATC | 2 cut(s) | 1086, 1426 |
| BmtI | GCTAGC | 1 cut(s) | 1196 |
| BmuI | ACTGGG | 2 cut(s) | 967, 1441 |
| BpiI | GAAGAC | 1 cut(s) | 1301 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 612, 644 |
| BpmI | CTGGAG | 1 cut(s) | 279 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1440 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 206 |
| BpuMI | CCSGG | 1 cut(s) | 52 |
| BsaAI | YACGTR | 1 cut(s) | 732 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1376 |
| BsaHI | GRCGYC | 1 cut(s) | 1152 |
| BsaJI | CCNNGG | 4 cut(s) | 31, 125, 286, 471 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 851, 881 |
| Bse1I | ACTGG | 4 cut(s) | 449, 784, 962, 1436 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1376 |
| BseDI | CCNNGG | 4 cut(s) | 31, 125, 286, 471 |
| BseGI | GGATG | 6 cut(s) | 68, 1030, 1077, 1262, 1377, 1441 |
| BseJI | GATNNNNATC | 1 cut(s) | 1376 |
| BseMII | CTCAG | 7 cut(s) | 66, 220, 230, 692, 1248, 1431, 1449 |
| BseNI | ACTGG | 4 cut(s) | 449, 784, 962, 1436 |
| BsePI | GCGCGC | 1 cut(s) | 515 |
| BseRI | GAGGAG | 1 cut(s) | 20 |
| BseXI | GCAGC | 6 cut(s) | 138, 431, 676, 973, 976, 1004 |
| BseYI | CCCAGC | 1 cut(s) | 310 |
| Bsh1236I | CGCG | 3 cut(s) | 517, 519, 1454 |
| BshFI | GGCC | 6 cut(s) | 103, 124, 234, 814, 981, 1043 |
| BsiSI | CCGG | 1 cut(s) | 52 |
| BslFI | GGGAC | 3 cut(s) | 489, 974, 1084 |
| BsmFI | GGGAC | 3 cut(s) | 489, 974, 1084 |
| BsmI | GAATGC | 1 cut(s) | 1218 |
| BsnI | GGCC | 6 cut(s) | 103, 124, 234, 814, 981, 1043 |
| Bsp1286I | GDGCHC | 1 cut(s) | 900 |
| Bsp1407I | TGTACA | 1 cut(s) | 328 |
| Bsp143I | GATC | 2 cut(s) | 507, 1472 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 206 |
| Bsp19I | CCATGG | 1 cut(s) | 471 |
| BspACI | CCGC | 4 cut(s) | 23, 72, 519, 1454 |
| BspANI | GGCC | 6 cut(s) | 103, 124, 234, 814, 981, 1043 |
| BspCNI | CTCAG | 7 cut(s) | 67, 219, 231, 693, 1247, 1432, 1450 |
| BspFNI | CGCG | 3 cut(s) | 517, 519, 1454 |
| BspLI | GGNNCC | 5 cut(s) | 262, 358, 572, 899, 1072 |
| BspMAI | CTGCAG | 1 cut(s) | 994 |
| BspMI | ACCTGC | 1 cut(s) | 1346 |
| BspOI | GCTAGC | 1 cut(s) | 1196 |
| BsrGI | TGTACA | 1 cut(s) | 328 |
| BsrI | ACTGG | 4 cut(s) | 449, 784, 962, 1436 |
| BssECI | CCNNGG | 4 cut(s) | 31, 125, 286, 471 |
| BssHII | GCGCGC | 1 cut(s) | 515 |
| BssMI | GATC | 2 cut(s) | 507, 1472 |
| BssNI | GRCGYC | 1 cut(s) | 1152 |
| BssT1I | CCWWGG | 3 cut(s) | 125, 286, 471 |
| Bst4CI | ACNGT | 2 cut(s) | 337, 1511 |
| BstACI | GRCGYC | 1 cut(s) | 1152 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 973 |
| BstAUI | TGTACA | 1 cut(s) | 328 |
| BstBAI | YACGTR | 1 cut(s) | 732 |
| BstC8I | GCNNGC | 8 cut(s) | 255, 348, 517, 997, 1136, 1194, 1263, 1480 |
| BstDEI | CTNAG | 8 cut(s) | 75, 113, 206, 239, 701, 1234, 1440, 1458 |
| BstDSI | CCRYGG | 1 cut(s) | 471 |
| BstF5I | GGATG | 6 cut(s) | 68, 1030, 1077, 1262, 1377, 1441 |
| BstFNI | CGCG | 3 cut(s) | 517, 519, 1454 |
| BstHHI | GCGC | 2 cut(s) | 517, 519 |
| BstKTI | GATC | 2 cut(s) | 510, 1475 |
| BstMBI | GATC | 2 cut(s) | 507, 1472 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 19, 269, 356, 762, 973, 992, 1271 |
| BstNSI | RCATGY | 3 cut(s) | 205, 613, 967 |
| BstSCI | CCNGG | 1 cut(s) | 50 |
| BstSFI | CTRYAG | 2 cut(s) | 105, 990 |
| BstSNI | TACGTA | 1 cut(s) | 732 |
| BstUI | CGCG | 3 cut(s) | 517, 519, 1454 |
| BstV1I | GCAGC | 6 cut(s) | 138, 431, 676, 973, 976, 1004 |
| BstV2I | GAAGAC | 1 cut(s) | 1301 |
| BstX2I | RGATCY | 2 cut(s) | 507, 1472 |
| BstYI | RGATCY | 2 cut(s) | 507, 1472 |
| BsuRI | GGCC | 6 cut(s) | 103, 124, 234, 814, 981, 1043 |
| BtgI | CCRYGG | 1 cut(s) | 471 |
| BtsCI | GGATG | 6 cut(s) | 68, 1030, 1077, 1262, 1377, 1441 |
| BtsI | GCAGTG | 1 cut(s) | 1416 |
| BtsIMutI | CAGTG | 3 cut(s) | 698, 1105, 1416 |
| BveI | ACCTGC | 1 cut(s) | 1346 |
| Cac8I | GCNNGC | 8 cut(s) | 255, 348, 517, 997, 1136, 1194, 1263, 1480 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1175 |
| CfoI | GCGC | 2 cut(s) | 517, 519 |
| Cfr13I | GGNCC | 3 cut(s) | 35, 455, 1071 |
| CseI | GACGC | 1 cut(s) | 1160 |
| Csp6I | GTAC | 4 cut(s) | 16, 329, 442, 868 |
| CviQI | GTAC | 4 cut(s) | 16, 329, 442, 868 |
| DdeI | CTNAG | 8 cut(s) | 75, 113, 206, 239, 701, 1234, 1440, 1458 |
| DpnI | GATC | 2 cut(s) | 509, 1474 |
| DpnII | GATC | 2 cut(s) | 507, 1472 |
| EaeI | YGGCCR | 2 cut(s) | 232, 1041 |
| Eco105I | TACGTA | 1 cut(s) | 732 |
| Eco130I | CCWWGG | 3 cut(s) | 125, 286, 471 |
| Eco147I | AGGCCT | 2 cut(s) | 103, 981 |
| Eco24I | GRGCYC | 1 cut(s) | 900 |
| Eco47I | GGWCC | 3 cut(s) | 35, 455, 1071 |
| Eco57I | CTGAAG | 1 cut(s) | 560 |
| EcoT14I | CCWWGG | 3 cut(s) | 125, 286, 471 |
| EcoT22I | ATGCAT | 1 cut(s) | 544 |
| EcoT38I | GRGCYC | 1 cut(s) | 900 |
| ErhI | CCWWGG | 3 cut(s) | 125, 286, 471 |
| FaqI | GGGAC | 3 cut(s) | 489, 974, 1084 |
| Fnu4HI | GCNGC | 9 cut(s) | 23, 152, 420, 520, 690, 987, 990, 993, 1455 |
| FokI | GGATG | 6 cut(s) | 55, 1017, 1064, 1269, 1384, 1448 |
| FriOI | GRGCYC | 1 cut(s) | 900 |
| Fsp4HI | GCNGC | 9 cut(s) | 23, 152, 420, 520, 690, 987, 990, 993, 1455 |
| FspBI | CTAG | 7 cut(s) | 126, 131, 902, 977, 1019, 1193, 1341 |
| GlaI | GCGC | 2 cut(s) | 516, 518 |
| GluI | GCNGC | 9 cut(s) | 23, 152, 420, 520, 690, 987, 990, 993, 1455 |
| GsaI | CCCAGC | 1 cut(s) | 314 |
| GsuI | CTGGAG | 1 cut(s) | 279 |
| HaeIII | GGCC | 6 cut(s) | 103, 124, 234, 814, 981, 1043 |
| HapII | CCGG | 1 cut(s) | 52 |
| HgaI | GACGC | 1 cut(s) | 1160 |
| HhaI | GCGC | 2 cut(s) | 517, 519 |
| Hin1I | GRCGYC | 1 cut(s) | 1152 |
| Hin6I | GCGC | 2 cut(s) | 515, 517 |
| HinP1I | GCGC | 2 cut(s) | 515, 517 |
| HinfI | GANTC | 5 cut(s) | 41, 55, 143, 282, 926 |
| HpaII | CCGG | 1 cut(s) | 52 |
| Hpy166II | GTNNAC | 4 cut(s) | 595, 670, 1282, 1450 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 35, 240, 484, 507, 1177, 1382 |
| Hpy188III | TCNNGA | 4 cut(s) | 59, 804, 1081, 1210 |
| Hpy8I | GTNNAC | 4 cut(s) | 595, 670, 1282, 1450 |
| HpyAV | CCTTC | 3 cut(s) | 93, 584, 641 |
| HpyCH4III | ACNGT | 2 cut(s) | 337, 1511 |
| HpyCH4IV | ACGT | 1 cut(s) | 731 |
| HpyCH4V | TGCA | 9 cut(s) | 245, 272, 409, 542, 765, 942, 967, 992, 1478 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 19, 269, 356, 762, 973, 992, 1271 |
| HpyF3I | CTNAG | 8 cut(s) | 75, 113, 206, 239, 701, 1234, 1440, 1458 |
| HpySE526I | ACGT | 1 cut(s) | 731 |
| Hsp92I | GRCGYC | 1 cut(s) | 1152 |
| HspAI | GCGC | 2 cut(s) | 515, 517 |
| Kzo9I | GATC | 2 cut(s) | 507, 1472 |
| LmnI | GCTCC | 8 cut(s) | 10, 94, 250, 260, 356, 371, 416, 903 |
| Lsp1109I | GCAGC | 6 cut(s) | 138, 431, 676, 973, 976, 1004 |
| LweI | GCATC | 2 cut(s) | 1086, 1426 |
| MaeI | CTAG | 7 cut(s) | 126, 131, 902, 977, 1019, 1193, 1341 |
| MaeII | ACGT | 1 cut(s) | 731 |
| MaeIII | GTNAC | 2 cut(s) | 214, 1148 |
| MalI | GATC | 2 cut(s) | 509, 1474 |
| MboI | GATC | 2 cut(s) | 507, 1472 |
| MboII | GAAGA | 2 cut(s) | 95, 1301 |
| MfeI | CAATTG | 3 cut(s) | 1245, 1314, 1490 |
| MflI | RGATCY | 2 cut(s) | 507, 1472 |
| MhlI | GDGCHC | 1 cut(s) | 900 |
| MlsI | TGGCCA | 2 cut(s) | 234, 1043 |
| MluNI | TGGCCA | 2 cut(s) | 234, 1043 |
| MlyI | GAGTC | 3 cut(s) | 35, 152, 920 |
| Mox20I | TGGCCA | 2 cut(s) | 234, 1043 |
| Mph1103I | ATGCAT | 1 cut(s) | 544 |
| MscI | TGGCCA | 2 cut(s) | 234, 1043 |
| MseI | TTAA | 2 cut(s) | 524, 822 |
| MslI | CAYNNNNRTG | 3 cut(s) | 115, 221, 240 |
| Msp20I | TGGCCA | 2 cut(s) | 234, 1043 |
| MspA1I | CMGCKG | 1 cut(s) | 74 |
| MspI | CCGG | 1 cut(s) | 52 |
| MspR9I | CCNGG | 1 cut(s) | 52 |
| MunI | CAATTG | 3 cut(s) | 1245, 1314, 1490 |
| Mva1269I | GAATGC | 1 cut(s) | 1218 |
| MvnI | CGCG | 3 cut(s) | 517, 519, 1454 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 19, 269, 356, 762, 973, 992, 1271 |
| NciI | CCSGG | 1 cut(s) | 52 |
| NcoI | CCATGG | 1 cut(s) | 471 |
| NdeII | GATC | 2 cut(s) | 507, 1472 |
| NheI | GCTAGC | 1 cut(s) | 1192 |
| NlaIV | GGNNCC | 5 cut(s) | 262, 358, 572, 899, 1072 |
| NmuCI | GTSAC | 2 cut(s) | 214, 1148 |
| NsiI | ATGCAT | 1 cut(s) | 544 |
| NspI | RCATGY | 3 cut(s) | 205, 613, 967 |
| OliI | CACNNNNGTG | 1 cut(s) | 115 |
| PauI | GCGCGC | 1 cut(s) | 515 |
| PceI | AGGCCT | 2 cut(s) | 103, 981 |
| PciI | ACATGT | 1 cut(s) | 609 |
| PctI | GAATGC | 1 cut(s) | 1218 |
| PfeI | GAWTC | 2 cut(s) | 55, 282 |
| PfoI | TCCNGGA | 1 cut(s) | 50 |
| PkrI | GCNGC | 9 cut(s) | 24, 153, 421, 521, 691, 988, 991, 994, 1456 |
| PleI | GAGTC | 3 cut(s) | 35, 151, 920 |
| PpsI | GAGTC | 3 cut(s) | 35, 151, 920 |
| Ppu21I | YACGTR | 1 cut(s) | 732 |
| PscI | ACATGT | 1 cut(s) | 609 |
| PspFI | CCCAGC | 1 cut(s) | 310 |
| PspN4I | GGNNCC | 5 cut(s) | 262, 358, 572, 899, 1072 |
| PspPI | GGNCC | 3 cut(s) | 35, 455, 1071 |
| PstI | CTGCAG | 1 cut(s) | 994 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1175 |
| PsuI | RGATCY | 2 cut(s) | 507, 1472 |
| PteI | GCGCGC | 1 cut(s) | 515 |
| RsaI | GTAC | 4 cut(s) | 17, 330, 443, 869 |
| RsaNI | GTAC | 4 cut(s) | 16, 329, 442, 868 |
| RseI | CAYNNNNRTG | 3 cut(s) | 115, 221, 240 |
| SaqAI | TTAA | 2 cut(s) | 524, 822 |
| SatI | GCNGC | 9 cut(s) | 23, 152, 420, 520, 690, 987, 990, 993, 1455 |
| Sau3AI | GATC | 2 cut(s) | 507, 1472 |
| Sau96I | GGNCC | 3 cut(s) | 35, 455, 1071 |
| SchI | GAGTC | 3 cut(s) | 35, 152, 920 |
| ScrFI | CCNGG | 1 cut(s) | 52 |
| SduI | GDGCHC | 1 cut(s) | 900 |
| SfaNI | GCATC | 2 cut(s) | 1086, 1426 |
| SfcI | CTRYAG | 2 cut(s) | 105, 990 |
| SinI | GGWCC | 3 cut(s) | 35, 455, 1071 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 115, 221, 240 |
| SnaBI | TACGTA | 1 cut(s) | 732 |
| SpeI | ACTAGT | 1 cut(s) | 1340 |
| SseBI | AGGCCT | 2 cut(s) | 103, 981 |
| SsiI | CCGC | 4 cut(s) | 23, 72, 519, 1454 |
| SspMI | CTAG | 7 cut(s) | 126, 131, 902, 977, 1019, 1193, 1341 |
| StuI | AGGCCT | 2 cut(s) | 103, 981 |
| StyD4I | CCNGG | 1 cut(s) | 50 |
| StyI | CCWWGG | 3 cut(s) | 125, 286, 471 |
| TaaI | ACNGT | 2 cut(s) | 337, 1511 |
| TaiI | ACGT | 1 cut(s) | 734 |
| TaqI | TCGA | 2 cut(s) | 146, 1003 |
| TaqII | GACCGA | 1 cut(s) | 1295 |
| TatI | WGTACW | 2 cut(s) | 328, 441 |
| TauI | GCSGC | 3 cut(s) | 25, 522, 1457 |
| TfiI | GAWTC | 2 cut(s) | 55, 282 |
| Tru1I | TTAA | 2 cut(s) | 524, 822 |
| Tru9I | TTAA | 2 cut(s) | 524, 822 |
| TscAI | CASTG | 3 cut(s) | 705, 1105, 1423 |
| TseFI | GTSAC | 2 cut(s) | 214, 1148 |
| TseI | GCWGC | 6 cut(s) | 151, 419, 689, 986, 989, 992 |
| Tsp45I | GTSAC | 2 cut(s) | 214, 1148 |
| TspDTI | ATGAA | 2 cut(s) | 162, 959 |
| TspGWI | ACGGA | 1 cut(s) | 384 |
| TspRI | CASTG | 3 cut(s) | 705, 1105, 1423 |
| VpaK11BI | GGWCC | 3 cut(s) | 35, 455, 1071 |
| XapI | RAATTY | 3 cut(s) | 86, 807, 1046 |
| XceI | RCATGY | 3 cut(s) | 205, 613, 967 |
| XmaJI | CCTAGG | 1 cut(s) | 125 |
| XspI | CTAG | 7 cut(s) | 126, 131, 902, 977, 1019, 1193, 1341 |
| Zsp2I | ATGCAT | 1 cut(s) | 544 |