Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000941

Physical Location & Seq

Genomic Coordinates Forward (+)

16911644 .. 16914433

Gene Structure 2790 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00095540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGATGATTCAGGGAATGGGGTTTGTACCAGCTAAGCAGACACATACAGTCGATCACTATTACACGTACCAACTAGAAACCATGGGATCCGAAGAGGAGCGGCCGCTACTACATGGAATTGACTCTCCGACGTGTCGCATTTCTGATCTGTCGTCCACCGTGGTCGAAGAGTTTCTAGAACAACCGCGGCGGGTGGCATTTCGATGCTGGGCCCGGCTGGTTGCTTGGGAGTCGAGGCTCCTCTGGCTTTTATCCGGATCATCAATTGCTGTTTCTGTATTCAATTATATGTTGAGTTTCGTCACTCTCATATTTTGTGGGCAAATGAGTGCTTTGGAGCTCGCTGGTGCCTCGATTGCTAGTGTTGGAATACAAGGTCTTGCTTATGGAATCATGTTGGGCATGGCAAGTGCTGTACAAACAGTTTGTGGGCAAGCCTATGGAGCAAAACGCTTGCCAGCAATGGGGATCATATGCCAAAGAGCAATCATTTTGCACTTGGGAGCTGCAATCCTCCTCACACCTGTGTACTGGTGGTCAGGCCCAATACTCATCGCCATCGGCCAATCAGAGGACATAGCAGGGCAGGGTCAAATCTTTGCACGCGGCCTGATCCTTCAACTCTATGCATTTGCCATTAACTGCCCACAACAGAGGTTCCTTCAAGCACAGAACATAGTGAACCCTTTGGCATACATCTCTACGGGAGTTTTCACCCTTCACATTCTTCTCAGTTGGCTAGTGGTATATGTTGCTGACTATGGACTAACTGGTGCTGCTCTTACACTGAGTTTTTCTTGGTGGTTGCTTGTTTTAATATGTGGGATTTACATTCTTGTAAGCCCCAACTGCAAGGAAACTTGGACCGGCTTCTCTTGGAAAGCTTTCAATGGAATTTGGCCTTATTTAAAGTTGACTATCGCCTCTGCCGTCATGCTGTGTTTGGAGATATGGTACAACCAAGGACTAACCCTGATATCTGGGCTCCTCCCCAACCCTACAATATCTCTAGATTCCCTTTCAATTTGTATGAATTACTGGTGCTGGAGTCTGCAGTTTATGTTAGGATTAAGTGCAGCAGCCAGTGTTAGAGTGAGTAATGAGCTAGGGGCTGGTAATCCAAAGGTGGCCAAATTTTCGGTTTTTGTAGTGACCGGTACAAGCATCCTGATTAGTGTAGTCTTCACTGCAATCATTTTGATATTCCAAATTGGATTAAGCAAGCTGTTTACAAGCGACCCCGAGGTTATCCAAGCAGTGATTGAGTTAATTCCGATGCTGGCTATCTCTGTTTTTTTGAATGGCATCCAACCTATACTCTCAGGTGTGGCAATTGGAAGCGGGTGGCAAGACATCGTGGCTTATGTTAACGTTATTTGTTTCTATATCATTGGACTCCCAATTGGATGTGTTCTTGGCTTCAAAACTGATATGGGAGTAGCAGGCATTTGGTGGGGGATGATTGTGGGCGTTGGTTTACAAACAATAACTCTAATTATTCTCACTGCCAGAACAAATTGGAATGCTGAGGTAGTGAAAGCTGCTGATCGCTTGAAAAGATCTGCAAGTGAAGAAATCTTGAACTTGGTGGGGGTTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0015075 GO:0015077 GO:0015078 GO:0015238 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015672 GO:0015893 GO:0016020 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0021700 GO:0022414 GO:0022611 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0032501 GO:0032502 GO:0032504 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071695 GO:0071704 GO:0097437 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

533

Amino Acids

58.11

Weight (kDa)

6.23

Isoelectric Point (pI)

33.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	89 - 247	1.9e-25	MatE
MatE	PF01554	309 - 469	5.7e-28	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59030 AT3G59030
fragaria_vesca	FvH4_2g14370 FvH4_2g14370 FvH4_2g26470 FvH4_2g26470 FvH4_2g26470 FvH4_6g37810 FvH4_6g38980 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010
malus_domestica	MD09G1145600.v1.1 MD17G1131800.v1.1 MD17G1132100.v1.1
prunus_persica	Prupe.3G180200_v2.0.a1 Prupe.3G180400_v2.0.a1 Prupe.3G180900_v2.0.a1
pyrus_communis	pycom09g06590 pycom17g12460 pycom17g12550
rosa_chinensis	RchiOBHm_Chr2g0152571 RchiOBHm_Chr2g0152611 RchiOBHm_Chr6g0295151
rosa_laevigata	RLG00000011817 RLG00000013373 RLG00000020516 RLG00000020647 RLG00000020650
rosa_multiflora	Rmu_co8487657.1_g000001 Rmu_sc0000185.1_g000024 Rmu_ssc0000233.1_g000025
rosa_roxburghii	Rroxscaffold_171G00441390 Rroxscaffold_2G00095540 Rroxscaffold_2G00096850 Rroxscaffold_7G00172690 Rroxscaffold_7G00192070
rosa_rugosa	Rorug02G0423200 Rorug02G0434600 Rorug02G0434900 Rorug02G0434900 Rorug06G0249500
rosa_samantha	Rh2AG483600 Rh2AG495900 Rh2AG496600 Rh2BG495900 Rh2BG507700 Rh2BG508200 Rh2CG469800 Rh2CG482100 Rh2CG482600 Rh2DG506900 Rh2DG519800 Rh6AG362500 Rh6CG221100 Rh6DG363300
rosa_wichuraiana	Rw0G004840 Rw2G039630 Rw2G040800 Rw2G040840 Rw2G041230 Rw2G041260 Rw6G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	347
AccBSI	CCGCTC	1 cut(s)	100
AccII	CGCG	2 cut(s)	187, 606
AccIII	TCCGGA	1 cut(s)	254
AciI	CCGC	7 cut(s)	100, 104, 185, 187, 190, 606, 1341
AclI	AACGTT	1 cut(s)	1371
AclWI	GGATC	5 cut(s)	81, 94, 265, 476, 607
AcoI	YGGCCR	3 cut(s)	101, 562, 1128
AcsI	RAATTY	2 cut(s)	894, 1133
AfaI	GTAC	6 cut(s)	27, 68, 417, 530, 956, 1159
AfiI	CCNNNNNNNGG	2 cut(s)	464, 571
AflIII	ACRYGT	2 cut(s)	63, 131
AgeI	ACCGGT	1 cut(s)	1154
AgsI	TTSAA	9 cut(s)	283, 620, 665, 889, 1023, 1300, 1423, 1555, 1582
AjiI	CACGTC	1 cut(s)	132
AleI	CACNNNNGTG	1 cut(s)	524
AluBI	AGCT	7 cut(s)	32, 340, 506, 884, 1105, 1225, 1541
AluI	AGCT	7 cut(s)	32, 340, 506, 884, 1105, 1225, 1541
Alw21I	GWGCWC	1 cut(s)	342
AlwI	GGATC	5 cut(s)	81, 94, 265, 476, 607
Ama87I	CYCGRG	1 cut(s)	1241
Aor13HI	TCCGGA	1 cut(s)	254
AoxI	GGCC	7 cut(s)	101, 210, 541, 562, 607, 899, 1128
ApaI	GGGCCC	1 cut(s)	214
ApeKI	GCWGC	5 cut(s)	506, 776, 1076, 1079, 1541
ApoI	RAATTY	2 cut(s)	894, 1133
AsiGI	ACCGGT	1 cut(s)	1154
Asp700I	GAANNNNTTC	2 cut(s)	171, 884
AspS9I	GGNCC	4 cut(s)	210, 211, 542, 864
AsuC2I	CCSGG	1 cut(s)	214
AsuHPI	GGTGA	1 cut(s)	706
AvaI	CYCGRG	1 cut(s)	1241
AvaII	GGWCC	1 cut(s)	864
BaeGI	GKGCMC	1 cut(s)	214
BalI	TGGCCA	1 cut(s)	1130
BamHI	GGATCC	1 cut(s)	86
BanI	GGYRCC	1 cut(s)	347
BanII	GRGCYC	3 cut(s)	214, 342, 987
BbsI	GAAGAC	1 cut(s)	1174
Bbv12I	GWGCWC	1 cut(s)	342
BbvCI	CCTCAGC	1 cut(s)	1527
BbvI	GCAGC	5 cut(s)	493, 763, 1088, 1091, 1528
BccI	CCATC	1 cut(s)	566
BceAI	ACGGC	1 cut(s)	914
BcnI	CCSGG	1 cut(s)	214
BfaI	CTAG	6 cut(s)	74, 176, 360, 740, 1010, 1106
BfmI	CTRYAG	1 cut(s)	1052
BglII	AGATCT	1 cut(s)	1559
BisI	GCNGC	9 cut(s)	101, 104, 188, 507, 607, 777, 1077, 1080, 1542
BlpI	GCTNAGC	1 cut(s)	33
BlsI	GCNGC	9 cut(s)	102, 105, 189, 508, 608, 778, 1078, 1081, 1543
Bme1390I	CCNGG	1 cut(s)	214
Bme18I	GGWCC	1 cut(s)	864
BmeT110I	CYCGRG	1 cut(s)	1241
BmgBI	CACGTC	1 cut(s)	132
BmgT120I	GGNCC	4 cut(s)	210, 211, 542, 864
BmiI	GGNNCC	6 cut(s)	88, 212, 239, 349, 659, 986
BmrFI	CCNGG	1 cut(s)	214
BmsI	GCATC	4 cut(s)	194, 1173, 1266, 1314
BpiI	GAAGAC	1 cut(s)	1174
BpmI	CTGGAG	1 cut(s)	1066
Bpu10I	CCTNAGC	1 cut(s)	1527
Bpu1102I	GCTNAGC	1 cut(s)	33
BpuMI	CCSGG	1 cut(s)	214
BsaAI	YACGTR	1 cut(s)	66
BsaJI	CCNNGG	5 cut(s)	81, 159, 185, 961, 1242
BsaWI	WCCGGW	2 cut(s)	254, 1154
BsaXI	ACNNNNNCTCC	2 cut(s)	938, 968
Bsc4I	CCNNNNNNNGG	2 cut(s)	464, 571
Bse118I	RCCGGY	2 cut(s)	866, 1154
Bse1I	ACTGG	4 cut(s)	536, 775, 1043, 1083
Bse3DI	GCAATG	1 cut(s)	468
BseAI	TCCGGA	1 cut(s)	254
BseDI	CCNNGG	5 cut(s)	81, 159, 185, 961, 1242
BseGI	GGATG	4 cut(s)	1164, 1305, 1412, 1464
BseLI	CCNNNNNNNGG	2 cut(s)	464, 571
BseMI	GCAATG	1 cut(s)	468
BseMII	CTCAG	4 cut(s)	745, 779, 1335, 1518
BseNI	ACTGG	4 cut(s)	536, 775, 1043, 1083
BseRI	GAGGAG	4 cut(s)	110, 230, 506, 977
BseSI	GKGCMC	1 cut(s)	214
BseX3I	CGGCCG	1 cut(s)	101
BseXI	GCAGC	5 cut(s)	493, 763, 1088, 1091, 1528
BseYI	CCCAGC	1 cut(s)	207
BsgI	GTGCAG	1 cut(s)	1095
Bsh1236I	CGCG	2 cut(s)	187, 606
Bsh1285I	CGRYCG	1 cut(s)	104
BshFI	GGCC	7 cut(s)	103, 212, 543, 564, 609, 901, 1130
BshNI	GGYRCC	1 cut(s)	347
BshTI	ACCGGT	1 cut(s)	1154
BsiEI	CGRYCG	1 cut(s)	104
BsiHKAI	GWGCWC	1 cut(s)	342
BsiHKCI	CYCGRG	1 cut(s)	1241
BsiSI	CCGG	4 cut(s)	214, 255, 867, 1155
BslI	CCNNNNNNNGG	2 cut(s)	464, 571
BsmI	GAATGC	1 cut(s)	1528
BsnI	GGCC	7 cut(s)	103, 212, 543, 564, 609, 901, 1130
BsoBI	CYCGRG	1 cut(s)	1241
Bsp120I	GGGCCC	1 cut(s)	210
Bsp1286I	GDGCHC	3 cut(s)	214, 342, 987
Bsp13I	TCCGGA	1 cut(s)	254
Bsp1407I	TGTACA	1 cut(s)	415
Bsp143I	GATC	8 cut(s)	52, 86, 145, 257, 468, 612, 1546, 1559
Bsp1720I	GCTNAGC	1 cut(s)	33
Bsp19I	CCATGG	1 cut(s)	81
BspACI	CCGC	7 cut(s)	100, 104, 185, 187, 190, 606, 1341
BspANI	GGCC	7 cut(s)	103, 212, 543, 564, 609, 901, 1130
BspCNI	CTCAG	4 cut(s)	744, 780, 1334, 1519
BspEI	TCCGGA	1 cut(s)	254
BspFNI	CGCG	2 cut(s)	187, 606
BspLI	GGNNCC	6 cut(s)	88, 212, 239, 349, 659, 986
BspMAI	CTGCAG	1 cut(s)	1056
BspPI	GGATC	5 cut(s)	81, 94, 265, 476, 607
BspT107I	GGYRCC	1 cut(s)	347
BsrBI	CCGCTC	1 cut(s)	100
BsrDI	GCAATG	1 cut(s)	468
BsrFI	RCCGGY	2 cut(s)	866, 1154
BsrGI	TGTACA	1 cut(s)	415
BsrI	ACTGG	4 cut(s)	536, 775, 1043, 1083
BssAI	RCCGGY	2 cut(s)	866, 1154
BssECI	CCNNGG	5 cut(s)	81, 159, 185, 961, 1242
BssMI	GATC	8 cut(s)	52, 86, 145, 257, 468, 612, 1546, 1559
BssT1I	CCWWGG	2 cut(s)	81, 961
Bst4CI	ACNGT	3 cut(s)	49, 160, 424
Bst6I	CTCTTC	2 cut(s)	87, 162
BstAUI	TGTACA	1 cut(s)	415
BstBAI	YACGTR	1 cut(s)	66
BstC8I	GCNNGC	8 cut(s)	342, 435, 455, 459, 604, 1223, 1281, 1444
BstDEI	CTNAG	5 cut(s)	33, 731, 788, 1321, 1527
BstDSI	CCRYGG	3 cut(s)	81, 159, 185
BstF5I	GGATG	4 cut(s)	1164, 1305, 1412, 1464
BstFNI	CGCG	2 cut(s)	187, 606
BstKTI	GATC	8 cut(s)	55, 89, 148, 260, 471, 615, 1549, 1562
BstMBI	GATC	8 cut(s)	52, 86, 145, 257, 468, 612, 1546, 1559
BstMCI	CGRYCG	1 cut(s)	104
BstMWI	GCNNNNNNNGC	4 cut(s)	244, 356, 443, 849
BstSCI	CCNGG	1 cut(s)	212
BstSFI	CTRYAG	1 cut(s)	1052
BstSLI	GKGCMC	1 cut(s)	214
BstUI	CGCG	2 cut(s)	187, 606
BstV1I	GCAGC	5 cut(s)	493, 763, 1088, 1091, 1528
BstV2I	GAAGAC	1 cut(s)	1174
BstX2I	RGATCY	2 cut(s)	86, 1559
BstYI	RGATCY	2 cut(s)	86, 1559
BstZI	CGGCCG	1 cut(s)	101
BsuRI	GGCC	7 cut(s)	103, 212, 543, 564, 609, 901, 1130
BtgI	CCRYGG	3 cut(s)	81, 159, 185
BtgZI	GCGATG	1 cut(s)	538
BtrI	CACGTC	1 cut(s)	132
BtsCI	GGATG	4 cut(s)	1164, 1305, 1412, 1464
BtsI	GCAGTG	3 cut(s)	1185, 1263, 1503
BtsIMutI	CAGTG	5 cut(s)	785, 1090, 1185, 1263, 1503
Cac8I	GCNNGC	8 cut(s)	342, 435, 455, 459, 604, 1223, 1281, 1444
CciNI	GCGGCCGC	1 cut(s)	101
Cfr10I	RCCGGY	2 cut(s)	866, 1154
Cfr13I	GGNCC	4 cut(s)	210, 211, 542, 864
Cfr42I	CCGCGG	1 cut(s)	188
Csp6I	GTAC	6 cut(s)	26, 67, 416, 529, 955, 1158
CspAI	ACCGGT	1 cut(s)	1154
CviAII	CATG	5 cut(s)	82, 113, 394, 403, 934
CviQI	GTAC	6 cut(s)	26, 67, 416, 529, 955, 1158
DdeI	CTNAG	5 cut(s)	33, 731, 788, 1321, 1527
DpnI	GATC	8 cut(s)	54, 88, 147, 259, 470, 614, 1548, 1561
DpnII	GATC	8 cut(s)	52, 86, 145, 257, 468, 612, 1546, 1559
DraI	TTTAAA	1 cut(s)	909
EaeI	YGGCCR	3 cut(s)	101, 562, 1128
EagI	CGGCCG	1 cut(s)	101
Eam1104I	CTCTTC	2 cut(s)	87, 162
EarI	CTCTTC	2 cut(s)	87, 162
Ecl136II	GAGCTC	1 cut(s)	340
EclXI	CGGCCG	1 cut(s)	101
Eco130I	CCWWGG	2 cut(s)	81, 961
Eco24I	GRGCYC	3 cut(s)	214, 342, 987
Eco32I	GATATC	1 cut(s)	978
Eco47I	GGWCC	1 cut(s)	864
Eco52I	CGGCCG	1 cut(s)	101
Eco53kI	GAGCTC	1 cut(s)	340
Eco88I	CYCGRG	1 cut(s)	1241
EcoICRI	GAGCTC	1 cut(s)	340
EcoRV	GATATC	1 cut(s)	978
EcoT14I	CCWWGG	2 cut(s)	81, 961
EcoT22I	ATGCAT	1 cut(s)	631
EcoT38I	GRGCYC	3 cut(s)	214, 342, 987
ErhI	CCWWGG	2 cut(s)	81, 961
FaeI	CATG	5 cut(s)	85, 116, 397, 406, 937
FatI	CATG	5 cut(s)	81, 112, 393, 402, 933
FauI	CCCGC	2 cut(s)	183, 1334
FauNDI	CATATG	1 cut(s)	473
Fnu4HI	GCNGC	9 cut(s)	101, 104, 188, 507, 607, 777, 1077, 1080, 1542
FokI	GGATG	4 cut(s)	1151, 1292, 1419, 1471
FriOI	GRGCYC	3 cut(s)	214, 342, 987
Fsp4HI	GCNGC	9 cut(s)	101, 104, 188, 507, 607, 777, 1077, 1080, 1542
FspBI	CTAG	6 cut(s)	74, 176, 360, 740, 1010, 1106
GluI	GCNGC	9 cut(s)	101, 104, 188, 507, 607, 777, 1077, 1080, 1542
GsaI	CCCAGC	1 cut(s)	211
GsuI	CTGGAG	1 cut(s)	1066
HaeIII	GGCC	7 cut(s)	103, 212, 543, 564, 609, 901, 1130
HapII	CCGG	4 cut(s)	214, 255, 867, 1155
Hin1II	CATG	5 cut(s)	85, 116, 397, 406, 937
HincII	GTYRAC	2 cut(s)	915, 1369
HindII	GTYRAC	2 cut(s)	915, 1369
HindIII	AAGCTT	1 cut(s)	882
HinfI	GANTC	7 cut(s)	7, 122, 230, 390, 1013, 1048, 1395
HpaI	GTTAAC	1 cut(s)	1369
HpaII	CCGG	4 cut(s)	214, 255, 867, 1155
HphI	GGTGA	1 cut(s)	706
Hpy166II	GTNNAC	7 cut(s)	156, 529, 682, 915, 1230, 1369, 1478
Hpy188I	TCNGA	5 cut(s)	91, 129, 145, 571, 1275
Hpy188III	TCNNGA	5 cut(s)	176, 255, 1010, 1168, 1579
Hpy8I	GTNNAC	7 cut(s)	156, 529, 682, 915, 1230, 1369, 1478
Hpy99I	CGWCG	1 cut(s)	133
HpyAV	CCTTC	3 cut(s)	626, 671, 728
HpyCH4III	ACNGT	3 cut(s)	49, 160, 424
HpyCH4IV	ACGT	3 cut(s)	65, 131, 1371
HpyCH4V	TGCA	9 cut(s)	496, 509, 602, 629, 852, 1054, 1076, 1190, 1565
HpyF10VI	GCNNNNNNNGC	4 cut(s)	244, 356, 443, 849
HpyF3I	CTNAG	5 cut(s)	33, 731, 788, 1321, 1527
HpySE526I	ACGT	3 cut(s)	65, 131, 1371
Hsp92II	CATG	5 cut(s)	85, 116, 397, 406, 937
Kpn2I	TCCGGA	1 cut(s)	254
KspAI	GTTAAC	1 cut(s)	1369
KspI	CCGCGG	1 cut(s)	188
Kzo9I	GATC	8 cut(s)	52, 86, 145, 257, 468, 612, 1546, 1559
LmnI	GCTCC	6 cut(s)	97, 243, 337, 443, 503, 990
Lsp1109I	GCAGC	5 cut(s)	493, 763, 1088, 1091, 1528
LweI	GCATC	4 cut(s)	194, 1173, 1266, 1314
MaeI	CTAG	6 cut(s)	74, 176, 360, 740, 1010, 1106
MaeII	ACGT	3 cut(s)	65, 131, 1371
MaeIII	GTNAC	2 cut(s)	301, 1150
MalI	GATC	8 cut(s)	54, 88, 147, 259, 470, 614, 1548, 1561
MbiI	CCGCTC	1 cut(s)	100
MboI	GATC	8 cut(s)	52, 86, 145, 257, 468, 612, 1546, 1559
MboII	GAAGA	5 cut(s)	104, 179, 719, 1174, 1583
MfeI	CAATTG	3 cut(s)	264, 1332, 1401
MflI	RGATCY	2 cut(s)	86, 1559
MhlI	GDGCHC	3 cut(s)	214, 342, 987
MlsI	TGGCCA	1 cut(s)	1130
MluNI	TGGCCA	1 cut(s)	1130
MlyI	GAGTC	4 cut(s)	116, 239, 1057, 1389
MmeI	TCCRAC	3 cut(s)	152, 346, 1333
Mox20I	TGGCCA	1 cut(s)	1130
Mph1103I	ATGCAT	1 cut(s)	631
MroI	TCCGGA	1 cut(s)	254
MroXI	GAANNNNTTC	2 cut(s)	171, 884
MscI	TGGCCA	1 cut(s)	1130
MseI	TTAA	7 cut(s)	639, 815, 908, 1070, 1217, 1268, 1368
MslI	CAYNNNNRTG	2 cut(s)	202, 524
Msp20I	TGGCCA	1 cut(s)	1130
MspA1I	CMGCKG	1 cut(s)	187
MspI	CCGG	4 cut(s)	214, 255, 867, 1155
MspR9I	CCNGG	1 cut(s)	214
MunI	CAATTG	3 cut(s)	264, 1332, 1401
Mva1269I	GAATGC	1 cut(s)	1528
MvnI	CGCG	2 cut(s)	187, 606
MwoI	GCNNNNNNNGC	4 cut(s)	244, 356, 443, 849
NciI	CCSGG	1 cut(s)	214
NcoI	CCATGG	1 cut(s)	81
NdeI	CATATG	1 cut(s)	473
NdeII	GATC	8 cut(s)	52, 86, 145, 257, 468, 612, 1546, 1559
NlaIII	CATG	5 cut(s)	85, 116, 397, 406, 937
NlaIV	GGNNCC	6 cut(s)	88, 212, 239, 349, 659, 986
NmuCI	GTSAC	2 cut(s)	301, 1150
NotI	GCGGCCGC	1 cut(s)	101
NsiI	ATGCAT	1 cut(s)	631
OliI	CACNNNNGTG	1 cut(s)	524
PcsI	WCGNNNNNNNCGW	1 cut(s)	927
PctI	GAATGC	1 cut(s)	1528
PdmI	GAANNNNTTC	2 cut(s)	171, 884
PfeI	GAWTC	3 cut(s)	7, 390, 1013
PinAI	ACCGGT	1 cut(s)	1154
PkrI	GCNGC	9 cut(s)	102, 105, 189, 508, 608, 778, 1078, 1081, 1543
PleI	GAGTC	4 cut(s)	116, 238, 1056, 1389
PpsI	GAGTC	4 cut(s)	116, 238, 1056, 1389
Ppu21I	YACGTR	1 cut(s)	66
Psp124BI	GAGCTC	1 cut(s)	342
Psp1406I	AACGTT	1 cut(s)	1371
PspFI	CCCAGC	1 cut(s)	207
PspN4I	GGNNCC	6 cut(s)	88, 212, 239, 349, 659, 986
PspOMI	GGGCCC	1 cut(s)	210
PspPI	GGNCC	4 cut(s)	210, 211, 542, 864
PstI	CTGCAG	1 cut(s)	1056
PsuI	RGATCY	2 cut(s)	86, 1559
RsaI	GTAC	6 cut(s)	27, 68, 417, 530, 956, 1159
RsaNI	GTAC	6 cut(s)	26, 67, 416, 529, 955, 1158
RseI	CAYNNNNRTG	2 cut(s)	202, 524
SacI	GAGCTC	1 cut(s)	342
SacII	CCGCGG	1 cut(s)	188
SaqAI	TTAA	7 cut(s)	639, 815, 908, 1070, 1217, 1268, 1368
SatI	GCNGC	9 cut(s)	101, 104, 188, 507, 607, 777, 1077, 1080, 1542
Sau3AI	GATC	8 cut(s)	52, 86, 145, 257, 468, 612, 1546, 1559
Sau96I	GGNCC	4 cut(s)	210, 211, 542, 864
SchI	GAGTC	4 cut(s)	116, 239, 1057, 1389
ScrFI	CCNGG	1 cut(s)	214
SduI	GDGCHC	3 cut(s)	214, 342, 987
SfaNI	GCATC	4 cut(s)	194, 1173, 1266, 1314
SfcI	CTRYAG	1 cut(s)	1052
Sfr303I	CCGCGG	1 cut(s)	188
SgrBI	CCGCGG	1 cut(s)	188
SinI	GGWCC	1 cut(s)	864
SmiMI	CAYNNNNRTG	2 cut(s)	202, 524
SsiI	CCGC	7 cut(s)	100, 104, 185, 187, 190, 606, 1341
SspMI	CTAG	6 cut(s)	74, 176, 360, 740, 1010, 1106
SstI	GAGCTC	1 cut(s)	342
StyD4I	CCNGG	1 cut(s)	212
StyI	CCWWGG	2 cut(s)	81, 961
TaaI	ACNGT	3 cut(s)	49, 160, 424
TaiI	ACGT	3 cut(s)	68, 134, 1374
TaqI	TCGA	5 cut(s)	51, 165, 202, 233, 353
TatI	WGTACW	2 cut(s)	415, 528
TauI	GCSGC	4 cut(s)	103, 106, 190, 609
TfiI	GAWTC	3 cut(s)	7, 390, 1013
Tru1I	TTAA	7 cut(s)	639, 815, 908, 1070, 1217, 1268, 1368
Tru9I	TTAA	7 cut(s)	639, 815, 908, 1070, 1217, 1268, 1368
TscAI	CASTG	5 cut(s)	792, 1090, 1192, 1263, 1510
TseFI	GTSAC	2 cut(s)	301, 1150
TseI	GCWGC	5 cut(s)	506, 776, 1076, 1079, 1541
Tsp45I	GTSAC	2 cut(s)	301, 1150
TspDTI	ATGAA	1 cut(s)	1046
TspRI	CASTG	5 cut(s)	792, 1090, 1192, 1263, 1510
VpaK11BI	GGWCC	1 cut(s)	864
XapI	RAATTY	2 cut(s)	894, 1133
XbaI	TCTAGA	2 cut(s)	175, 1009
XmnI	GAANNNNTTC	2 cut(s)	171, 884
XspI	CTAG	6 cut(s)	74, 176, 360, 740, 1010, 1106
Zsp2I	ATGCAT	1 cut(s)	631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.