Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0000941

Physical Location & Seq

Genomic Coordinates Forward (+)

4825566 .. 4828049

Gene Structure 2484 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g06590.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGGGTCGCAGGAGGAGTACCAACCGCTACTCATCAGGCTCGATTCACACTCCCAGATACCTAACTTGTCGTCCAGTGCCATTGAAGAGTTTCTGGAGCACAAGCCCGTGGCGGTTCGATGGTGGCCTAAACTGGTGGCTTGGGAGTCGAGGCTCCTCTGGATTTTATCCGGTTCATCTATCGCTGTCTCTATATTCAACTACATGCTCAGCTTTGTGACTCTCATGTTTTGTGGGCACCTGAGTGCCTTGGAGCTTGCTGGGGCCTCTATAGCTAGCGTTGGAATTCAGGGTCTCGCTTATGGTATCATGTTGGGAATGGCGAGTGCTGTCCAAACAGTGTGTGGGCAAGCATATGGAGCCAAACAACTGCCAGCAATGGGAATCATATGCCAAAGGGCAATCATCCTGCATTTGGGAGCAGCAGTACTACTCACATTTGTGTACTGGTGGTCAGGACCAATCCTTATAGCCATCGGCCAAACAGACGACATAGCAGAGCAAGGCCAAGTATTTGCCAGAGGAATAATCCCACAGCTCTATGCATTTGCCATAAACTGCCCCCAGCAGAGGTTTCTCCAAGCCCAGAACATTGTAAACCCTCTAGCTTACATGTCACTCGGGGTCTTCCTCCTCCACATTCTGCTCACTTGGGTGGTGGTTTATGTGGTGGACTATGGGCTGACGGGGGCGGCTCTGACACTCAGCTTCTCTTGGTGGCTTCTTGTCATCACATATGGAATTTACATTCTTGTCAGCCCCAAGTGTAAGGAGACTTGGACTGGCTTCTCATGGAAGGCTTTTAGGGGCATTTGGCCTTACTTTAAGTTGACACTTGCCTCCGCTATCATGCTTTGTTTGGAGATATGGTACAACCAAGGACTAGTGCTGATATCAGGGCTTCTCTCCAATCCTACGATCTCTCTAGACTCCATTTCTATTTGCATGAACTACTTGAACTGGGACATGCAATTTATGTTAGGCCTATCCGCGGCAGCCAGTGTTCGTGTTAGTAATGAGCTCGGTGCCGGTCACCCGAAGGTGGCCAAGTTTTCAGTGTTTGTAGTGAACGGGACGAGCATATTGATTAGCATAGTCTTCAGTGCGATTATATTGATATTCCGAGTTGGATTGAGCAAGCTTTTTACAAGCGACGCTGAAGTTATCACGGCAGTATCTGATTTAACCCCATTGCTCGCCATCTCTGTTTTCTTGAATGGCATTCAACCTATACTCTCAGGTGTGGCAATTGGAAGCGGATGGCAAGCTGTTGTGGCGTATGTTAACCTGACTTGTTACTATATTATCGGTCTTCCGATTGGATGTGTTCTAGGCTTCAAAACTAGCATGGGAGTTGCAGGTATTTGGTGGGGAATGATCATTGGAGTTTTTCTACAAACAGTAACTCTAATTGTTCTCACTGCAAGAACAAACTGGGATTCTGAGGTTGTAAAAGCAGCTGAACGATTGAAGAAATCTGCAAGTGCAGAAAGATTAGACTTGGTGACTGATATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0015075 GO:0015077 GO:0015078 GO:0015238 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015672 GO:0015893 GO:0016020 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0021700 GO:0022414 GO:0022611 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0032501 GO:0032502 GO:0032504 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071695 GO:0071704 GO:0097437 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

506

Amino Acids

55.13

Weight (kDa)

6.98

Isoelectric Point (pI)

24.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59030 AT3G59030
fragaria_vesca	FvH4_2g14370 FvH4_2g14370 FvH4_2g26470 FvH4_2g26470 FvH4_2g26470 FvH4_6g37810 FvH4_6g38980 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010
malus_domestica	MD09G1145600.v1.1 MD17G1131800.v1.1 MD17G1132100.v1.1
prunus_persica	Prupe.3G180200_v2.0.a1 Prupe.3G180400_v2.0.a1 Prupe.3G180900_v2.0.a1
pyrus_communis	pycom09g06590 pycom17g12460 pycom17g12550
rosa_chinensis	RchiOBHm_Chr2g0152571 RchiOBHm_Chr2g0152611 RchiOBHm_Chr6g0295151
rosa_laevigata	RLG00000011817 RLG00000013373 RLG00000020516 RLG00000020647 RLG00000020650
rosa_multiflora	Rmu_co8487657.1_g000001 Rmu_sc0000185.1_g000024 Rmu_ssc0000233.1_g000025
rosa_roxburghii	Rroxscaffold_171G00441390 Rroxscaffold_2G00095540 Rroxscaffold_2G00096850 Rroxscaffold_7G00172690 Rroxscaffold_7G00192070
rosa_rugosa	Rorug02G0423200 Rorug02G0434600 Rorug02G0434900 Rorug02G0434900 Rorug06G0249500
rosa_samantha	Rh2AG483600 Rh2AG495900 Rh2AG496600 Rh2BG495900 Rh2BG507700 Rh2BG508200 Rh2CG469800 Rh2CG482100 Rh2CG482600 Rh2DG506900 Rh2DG519800 Rh6AG362500 Rh6CG221100 Rh6DG363300
rosa_wichuraiana	Rw0G004840 Rw2G039630 Rw2G040800 Rw2G040840 Rw2G041230 Rw2G041260 Rw6G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1349
AccB1I	GGYRCC	2 cut(s)	237, 1025
AccII	CGCG	1 cut(s)	992
AciI	CCGC	7 cut(s)	26, 113, 692, 843, 990, 992, 1257
AcoI	YGGCCR	2 cut(s)	478, 1044
AcsI	RAATTY	2 cut(s)	285, 741
AcuI	CTGAAG	2 cut(s)	1084, 1179
AfaI	GTAC	4 cut(s)	20, 429, 446, 872
AfiI	CCNNNNNNNGG	5 cut(s)	380, 415, 570, 991, 1042
AflIII	ACRYGT	1 cut(s)	612
AgsI	TTSAA	7 cut(s)	86, 199, 958, 1216, 1226, 1339, 1471
AhlI	ACTAGT	1 cut(s)	883
AleI	CACNNNNGTG	3 cut(s)	243, 440, 653
Alw21I	GWGCWC	2 cut(s)	102, 1023
Alw26I	GTCTC	3 cut(s)	193, 299, 767
AlwNI	CAGNNNCTG	1 cut(s)	1178
Ama87I	CYCGRG	1 cut(s)	620
AoxI	GGCC	7 cut(s)	125, 264, 478, 505, 815, 982, 1044
ApeKI	GCWGC	3 cut(s)	422, 995, 1457
ApoI	RAATTY	2 cut(s)	285, 741
Asp700I	GAANNNNTTC	1 cut(s)	90
AspS9I	GGNCC	2 cut(s)	264, 458
AsuHPI	GGTGA	2 cut(s)	1025, 1516
AsuNHI	GCTAGC	1 cut(s)	275
AvaI	CYCGRG	1 cut(s)	620
AvaII	GGWCC	1 cut(s)	458
BaeGI	GKGCMC	1 cut(s)	240
BaeI	ACNNNNGTAYC	2 cut(s)	1158, 1191
BalI	TGGCCA	1 cut(s)	1046
BanI	GGYRCC	2 cut(s)	237, 1025
BanII	GRGCYC	1 cut(s)	1023
BbsI	GAAGAC	3 cut(s)	619, 1090, 1304
Bbv12I	GWGCWC	2 cut(s)	102, 1023
BbvI	GCAGC	3 cut(s)	434, 1007, 1469
BccI	CCATC	4 cut(s)	114, 482, 1208, 1254
BceAI	ACGGC	1 cut(s)	1185
BclI	TGATCA	1 cut(s)	1377
BcoDI	GTCTC	3 cut(s)	193, 299, 767
BcuI	ACTAGT	1 cut(s)	883
BfaI	CTAG	6 cut(s)	276, 605, 884, 926, 1331, 1344
BfmI	CTRYAG	1 cut(s)	270
BfuAI	ACCTGC	1 cut(s)	1349
BisI	GCNGC	5 cut(s)	423, 693, 993, 996, 1458
BlpI	GCTNAGC	1 cut(s)	209
BlsI	GCNGC	5 cut(s)	424, 694, 994, 997, 1459
BmcAI	AGTACT	1 cut(s)	429
Bme18I	GGWCC	1 cut(s)	458
BmeT110I	CYCGRG	1 cut(s)	620
BmgT120I	GGNCC	2 cut(s)	264, 458
BmiI	GGNNCC	5 cut(s)	155, 239, 265, 361, 1027
BmrI	ACTGGG	2 cut(s)	970, 1444
BmtI	GCTAGC	1 cut(s)	279
BmuI	ACTGGG	2 cut(s)	970, 1444
BpiI	GAAGAC	3 cut(s)	619, 1090, 1304
BpmI	CTGGAG	1 cut(s)	116
Bpu1102I	GCTNAGC	1 cut(s)	209
BsaI	GGTCTC	1 cut(s)	299
BsaJI	CCNNGG	4 cut(s)	108, 249, 877, 990
BsaWI	WCCGGW	1 cut(s)	170
BsaXI	ACNNNNNCTCC	4 cut(s)	411, 441, 854, 884
Bsc4I	CCNNNNNNNGG	5 cut(s)	380, 415, 570, 991, 1042
Bse118I	RCCGGY	1 cut(s)	1028
Bse1I	ACTGG	7 cut(s)	75, 138, 452, 787, 965, 999, 1439
Bse3DI	GCAATG	2 cut(s)	384, 1190
BseDI	CCNNGG	4 cut(s)	108, 249, 877, 990
BseGI	GGATG	3 cut(s)	405, 1265, 1328
BseLI	CCNNNNNNNGG	5 cut(s)	380, 415, 570, 991, 1042
BseMI	GCAATG	2 cut(s)	384, 1190
BseMII	CTCAG	5 cut(s)	223, 233, 718, 1251, 1434
BseNI	ACTGG	7 cut(s)	75, 138, 452, 787, 965, 999, 1439
BseRI	GAGGAG	3 cut(s)	29, 146, 623
BseSI	GKGCMC	1 cut(s)	240
BseXI	GCAGC	3 cut(s)	434, 1007, 1469
BseYI	CCCAGC	2 cut(s)	260, 564
BsgI	GTGCAG	1 cut(s)	1506
Bsh1236I	CGCG	1 cut(s)	992
BshFI	GGCC	7 cut(s)	127, 266, 480, 507, 817, 984, 1046
BshNI	GGYRCC	2 cut(s)	237, 1025
BsiHKAI	GWGCWC	2 cut(s)	102, 1023
BsiHKCI	CYCGRG	1 cut(s)	620
BsiSI	CCGG	2 cut(s)	171, 1029
BslFI	GGGAC	2 cut(s)	977, 1087
BslI	CCNNNNNNNGG	5 cut(s)	380, 415, 570, 991, 1042
BsmAI	GTCTC	3 cut(s)	193, 299, 767
BsmFI	GGGAC	2 cut(s)	977, 1087
BsmI	GAATGC	1 cut(s)	1221
BsnI	GGCC	7 cut(s)	127, 266, 480, 507, 817, 984, 1046
Bso31I	GGTCTC	1 cut(s)	299
BsoBI	CYCGRG	1 cut(s)	620
Bsp1286I	GDGCHC	3 cut(s)	102, 240, 1023
Bsp143I	GATC	2 cut(s)	918, 1377
Bsp1720I	GCTNAGC	1 cut(s)	209
BspACI	CCGC	7 cut(s)	26, 113, 692, 843, 990, 992, 1257
BspANI	GGCC	7 cut(s)	127, 266, 480, 507, 817, 984, 1046
BspCNI	CTCAG	5 cut(s)	222, 234, 717, 1250, 1435
BspFNI	CGCG	1 cut(s)	992
BspLI	GGNNCC	5 cut(s)	155, 239, 265, 361, 1027
BspMI	ACCTGC	1 cut(s)	1349
BspOI	GCTAGC	1 cut(s)	279
BspT107I	GGYRCC	2 cut(s)	237, 1025
BspTNI	GGTCTC	1 cut(s)	299
BsrDI	GCAATG	2 cut(s)	384, 1190
BsrFI	RCCGGY	1 cut(s)	1028
BsrI	ACTGG	7 cut(s)	75, 138, 452, 787, 965, 999, 1439
BssAI	RCCGGY	1 cut(s)	1028
BssECI	CCNNGG	4 cut(s)	108, 249, 877, 990
BssMI	GATC	2 cut(s)	918, 1377
BssT1I	CCWWGG	2 cut(s)	249, 877
Bst4CI	ACNGT	2 cut(s)	340, 1402
Bst6I	CTCTTC	1 cut(s)	81
BstC8I	GCNNGC	7 cut(s)	258, 277, 351, 375, 1139, 1197, 1266
BstDEI	CTNAG	5 cut(s)	209, 242, 704, 1237, 1443
BstDSI	CCRYGG	2 cut(s)	108, 990
BstEII	GGTNACC	1 cut(s)	1031
BstF5I	GGATG	3 cut(s)	405, 1265, 1328
BstFNI	CGCG	1 cut(s)	992
BstKTI	GATC	2 cut(s)	921, 1380
BstMAI	GTCTC	3 cut(s)	193, 299, 767
BstMBI	GATC	2 cut(s)	918, 1377
BstMWI	GCNNNNNNNGC	3 cut(s)	272, 359, 1274
BstNSI	RCATGY	3 cut(s)	208, 616, 970
BstPI	GGTNACC	1 cut(s)	1031
BstSFI	CTRYAG	1 cut(s)	270
BstSLI	GKGCMC	1 cut(s)	240
BstUI	CGCG	1 cut(s)	992
BstV1I	GCAGC	3 cut(s)	434, 1007, 1469
BstV2I	GAAGAC	3 cut(s)	619, 1090, 1304
BsuRI	GGCC	7 cut(s)	127, 266, 480, 507, 817, 984, 1046
BtgI	CCRYGG	2 cut(s)	108, 990
BtsCI	GGATG	3 cut(s)	405, 1265, 1328
BtsI	GCAGTG	1 cut(s)	1419
BtsIMutI	CAGTG	6 cut(s)	82, 345, 1006, 1062, 1108, 1419
BveI	ACCTGC	1 cut(s)	1349
Cac8I	GCNNGC	7 cut(s)	258, 277, 351, 375, 1139, 1197, 1266
CaiI	CAGNNNCTG	1 cut(s)	1178
Cfr10I	RCCGGY	1 cut(s)	1028
Cfr13I	GGNCC	2 cut(s)	264, 458
Cfr42I	CCGCGG	1 cut(s)	993
CseI	GACGC	1 cut(s)	1163
Csp6I	GTAC	4 cut(s)	19, 428, 445, 871
CviAII	CATG	9 cut(s)	205, 226, 310, 613, 792, 850, 946, 967, 1348
CviQI	GTAC	4 cut(s)	19, 428, 445, 871
DdeI	CTNAG	5 cut(s)	209, 242, 704, 1237, 1443
DpnI	GATC	2 cut(s)	920, 1379
DpnII	GATC	2 cut(s)	918, 1377
EaeI	YGGCCR	2 cut(s)	478, 1044
Eam1104I	CTCTTC	1 cut(s)	81
EarI	CTCTTC	1 cut(s)	81
Ecl136II	GAGCTC	1 cut(s)	1021
Eco130I	CCWWGG	2 cut(s)	249, 877
Eco147I	AGGCCT	1 cut(s)	984
Eco24I	GRGCYC	1 cut(s)	1023
Eco31I	GGTCTC	1 cut(s)	299
Eco32I	GATATC	1 cut(s)	894
Eco47I	GGWCC	1 cut(s)	458
Eco53kI	GAGCTC	1 cut(s)	1021
Eco57I	CTGAAG	2 cut(s)	1084, 1179
Eco88I	CYCGRG	1 cut(s)	620
Eco91I	GGTNACC	1 cut(s)	1031
EcoICRI	GAGCTC	1 cut(s)	1021
EcoO109I	RGGNCCY	1 cut(s)	264
EcoO65I	GGTNACC	1 cut(s)	1031
EcoRI	GAATTC	1 cut(s)	285
EcoRV	GATATC	1 cut(s)	894
EcoT14I	CCWWGG	2 cut(s)	249, 877
EcoT22I	ATGCAT	1 cut(s)	547
EcoT38I	GRGCYC	1 cut(s)	1023
ErhI	CCWWGG	2 cut(s)	249, 877
FaeI	CATG	9 cut(s)	208, 229, 313, 616, 795, 853, 949, 970, 1351
FaqI	GGGAC	2 cut(s)	977, 1087
FatI	CATG	9 cut(s)	204, 225, 309, 612, 791, 849, 945, 966, 1347
FauNDI	CATATG	3 cut(s)	355, 389, 736
FbaI	TGATCA	1 cut(s)	1377
Fnu4HI	GCNGC	5 cut(s)	423, 693, 993, 996, 1458
FokI	GGATG	3 cut(s)	392, 1272, 1335
FriOI	GRGCYC	1 cut(s)	1023
Fsp4HI	GCNGC	5 cut(s)	423, 693, 993, 996, 1458
FspBI	CTAG	6 cut(s)	276, 605, 884, 926, 1331, 1344
GluI	GCNGC	5 cut(s)	423, 693, 993, 996, 1458
GsaI	CCCAGC	2 cut(s)	264, 568
GsuI	CTGGAG	1 cut(s)	116
HaeIII	GGCC	7 cut(s)	127, 266, 480, 507, 817, 984, 1046
HapII	CCGG	2 cut(s)	171, 1029
HgaI	GACGC	1 cut(s)	1163
Hin1II	CATG	9 cut(s)	208, 229, 313, 616, 795, 853, 949, 970, 1351
HincII	GTYRAC	2 cut(s)	831, 1285
HindII	GTYRAC	2 cut(s)	831, 1285
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	6 cut(s)	44, 146, 220, 384, 929, 1439
HpaI	GTTAAC	1 cut(s)	1285
HpaII	CCGG	2 cut(s)	171, 1029
HphI	GGTGA	2 cut(s)	1025, 1516
Hpy166II	GTNNAC	6 cut(s)	445, 598, 673, 831, 1069, 1285
Hpy188I	TCNGA	5 cut(s)	699, 1124, 1180, 1317, 1444
Hpy188III	TCNNGA	5 cut(s)	95, 160, 456, 926, 1213
Hpy8I	GTNNAC	6 cut(s)	445, 598, 673, 831, 1069, 1285
Hpy99I	CGWCG	1 cut(s)	1157
HpyAV	CCTTC	2 cut(s)	790, 1033
HpyCH4III	ACNGT	2 cut(s)	340, 1402
HpyCH4V	TGCA	8 cut(s)	412, 545, 945, 970, 1358, 1424, 1481, 1487
HpyF10VI	GCNNNNNNNGC	3 cut(s)	272, 359, 1274
HpyF3I	CTNAG	5 cut(s)	209, 242, 704, 1237, 1443
Hsp92II	CATG	9 cut(s)	208, 229, 313, 616, 795, 853, 949, 970, 1351
Ksp22I	TGATCA	1 cut(s)	1377
KspAI	GTTAAC	1 cut(s)	1285
KspI	CCGCGG	1 cut(s)	993
Kzo9I	GATC	2 cut(s)	918, 1377
LmnI	GCTCC	5 cut(s)	97, 159, 253, 359, 419
Lsp1109I	GCAGC	3 cut(s)	434, 1007, 1469
MaeI	CTAG	6 cut(s)	276, 605, 884, 926, 1331, 1344
MaeIII	GTNAC	6 cut(s)	217, 615, 1031, 1295, 1402, 1504
MalI	GATC	2 cut(s)	920, 1379
MboI	GATC	2 cut(s)	918, 1377
MboII	GAAGA	5 cut(s)	98, 619, 1090, 1304, 1483
MfeI	CAATTG	1 cut(s)	1248
MhlI	GDGCHC	3 cut(s)	102, 240, 1023
MlsI	TGGCCA	1 cut(s)	1046
MluCI	AATT	5 cut(s)	285, 741, 971, 1248, 1410
MluNI	TGGCCA	1 cut(s)	1046
MlyI	GAGTC	3 cut(s)	155, 214, 923
MmeI	TCCRAC	2 cut(s)	262, 1108
Mox20I	TGGCCA	1 cut(s)	1046
Mph1103I	ATGCAT	1 cut(s)	547
MroXI	GAANNNNTTC	1 cut(s)	90
MscI	TGGCCA	1 cut(s)	1046
MseI	TTAA	3 cut(s)	825, 1184, 1284
MslI	CAYNNNNRTG	3 cut(s)	243, 440, 653
Msp20I	TGGCCA	1 cut(s)	1046
MspA1I	CMGCKG	2 cut(s)	992, 1460
MspI	CCGG	2 cut(s)	171, 1029
MunI	CAATTG	1 cut(s)	1248
Mva1269I	GAATGC	1 cut(s)	1221
MvnI	CGCG	1 cut(s)	992
MwoI	GCNNNNNNNGC	3 cut(s)	272, 359, 1274
NdeI	CATATG	3 cut(s)	355, 389, 736
NdeII	GATC	2 cut(s)	918, 1377
NheI	GCTAGC	1 cut(s)	275
NlaIII	CATG	9 cut(s)	208, 229, 313, 616, 795, 853, 949, 970, 1351
NlaIV	GGNNCC	5 cut(s)	155, 239, 265, 361, 1027
NmuCI	GTSAC	4 cut(s)	217, 615, 1031, 1504
NsiI	ATGCAT	1 cut(s)	547
NspI	RCATGY	3 cut(s)	208, 616, 970
OliI	CACNNNNGTG	3 cut(s)	243, 440, 653
PceI	AGGCCT	1 cut(s)	984
PciI	ACATGT	1 cut(s)	612
PctI	GAATGC	1 cut(s)	1221
PdmI	GAANNNNTTC	1 cut(s)	90
PfeI	GAWTC	3 cut(s)	44, 384, 1439
PkrI	GCNGC	5 cut(s)	424, 694, 994, 997, 1459
PleI	GAGTC	3 cut(s)	154, 214, 923
PpsI	GAGTC	3 cut(s)	154, 214, 923
PscI	ACATGT	1 cut(s)	612
Psp124BI	GAGCTC	1 cut(s)	1023
PspEI	GGTNACC	1 cut(s)	1031
PspFI	CCCAGC	2 cut(s)	260, 564
PspN4I	GGNNCC	5 cut(s)	155, 239, 265, 361, 1027
PspPI	GGNCC	2 cut(s)	264, 458
PstNI	CAGNNNCTG	1 cut(s)	1178
PvuII	CAGCTG	1 cut(s)	1460
RsaI	GTAC	4 cut(s)	20, 429, 446, 872
RsaNI	GTAC	4 cut(s)	19, 428, 445, 871
RseI	CAYNNNNRTG	3 cut(s)	243, 440, 653
SacI	GAGCTC	1 cut(s)	1023
SacII	CCGCGG	1 cut(s)	993
SaqAI	TTAA	3 cut(s)	825, 1184, 1284
SatI	GCNGC	5 cut(s)	423, 693, 993, 996, 1458
Sau3AI	GATC	2 cut(s)	918, 1377
Sau96I	GGNCC	2 cut(s)	264, 458
ScaI	AGTACT	1 cut(s)	429
SchI	GAGTC	3 cut(s)	155, 214, 923
SduI	GDGCHC	3 cut(s)	102, 240, 1023
SfcI	CTRYAG	1 cut(s)	270
Sfr303I	CCGCGG	1 cut(s)	993
SgrBI	CCGCGG	1 cut(s)	993
SinI	GGWCC	1 cut(s)	458
SmiMI	CAYNNNNRTG	3 cut(s)	243, 440, 653
SpeI	ACTAGT	1 cut(s)	883
Sse9I	AATT	5 cut(s)	285, 741, 971, 1248, 1410
SseBI	AGGCCT	1 cut(s)	984
SsiI	CCGC	7 cut(s)	26, 113, 692, 843, 990, 992, 1257
SspMI	CTAG	6 cut(s)	276, 605, 884, 926, 1331, 1344
SstI	GAGCTC	1 cut(s)	1023
StuI	AGGCCT	1 cut(s)	984
StyI	CCWWGG	2 cut(s)	249, 877
TaaI	ACNGT	2 cut(s)	340, 1402
TaqI	TCGA	3 cut(s)	42, 118, 149
TaqII	GACCGA	1 cut(s)	1298
TasI	AATT	5 cut(s)	285, 741, 971, 1248, 1410
TatI	WGTACW	2 cut(s)	427, 444
TauI	GCSGC	2 cut(s)	695, 995
TfiI	GAWTC	3 cut(s)	44, 384, 1439
Tru1I	TTAA	3 cut(s)	825, 1184, 1284
Tru9I	TTAA	3 cut(s)	825, 1184, 1284
TscAI	CASTG	6 cut(s)	82, 345, 1006, 1062, 1108, 1426
TseFI	GTSAC	4 cut(s)	217, 615, 1031, 1504
TseI	GCWGC	3 cut(s)	422, 995, 1457
Tsp45I	GTSAC	4 cut(s)	217, 615, 1031, 1504
TspDTI	ATGAA	2 cut(s)	165, 962
TspRI	CASTG	6 cut(s)	82, 345, 1006, 1062, 1108, 1426
VpaK11BI	GGWCC	1 cut(s)	458
XapI	RAATTY	2 cut(s)	285, 741
XbaI	TCTAGA	1 cut(s)	925
XceI	RCATGY	3 cut(s)	208, 616, 970
XcmI	CCANNNNNNNNNTGG	1 cut(s)	341
XmnI	GAANNNNTTC	1 cut(s)	90
XspI	CTAG	6 cut(s)	276, 605, 884, 926, 1331, 1344
ZrmI	AGTACT	1 cut(s)	429
Zsp2I	ATGCAT	1 cut(s)	547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.