Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000941

Physical Location & Seq

Genomic Coordinates Forward (+)

11753815 .. 11757028

Gene Structure 3214 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1132100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGGGACGGCAGAAGAGTACCAACCGCTACTTAACGGACTCGACTCACATTCCCGGATTCCTGACCTTTCGTCCACTGCCGTTGAAGAGTTCCTGGAGCACAAGCCCGTTGCAGTTCGGTGGTGGCTTAGGCTGGTGGCATGGGAGTCAAGGCTCTTATGGACTTTATCCGGCTCATCTATCATCGTCTCCATATTCAACTACATGCTCAGCTTTACCACCCTCATGTTTTGTGGGCATTTGAGTGCCTTGGAGCTTGCTGGTGCCTCTATTGCCAGTGTGGGAATTCAGGGTCTTGCTTATGGTATTATGTTGGGAATGGCAAGTGCTGTGCAAACAGTGTGTGGGCAAGCATATGGAGCCAGACAGTATCCAGCAATGGGAATCATATGCCAACGAGCAATCGTCCTGCACTTGGGAGCAGCAGTCCTCCTAACATTTTTGTACTGGTGGTCAGGTCCAATCCTCATAGCCATTGGCCAAACAGAGGAAATAGCCGAGCAGGGACAAGTATTTGCCAGAGGAATAGTCCCACAGCTCTATGCATTTGCCATAAACTGCCCTCAGCAGAGGTTTCTCCAAGCACAAAACATTGTCAACCCTCTGGCTTTTATGTCGTTCGGGGTTTTCCTCGTCCACATTCTGCTCAGTTGGGTGGTGGTTTATGTGGCGGATTATGGGCTGACGGGGGCGGCTCTCACTCTGAGTTTCTCATGGTGGCTTCTTGTCATCGTATATGGGATTTACATTGTTGTCAGCCCCAAGTGTAAGGAGACTTGGACTGGCTTCTCTGGGAAGGCCTTTTGGGGCATTTGGCCTTACTTTAAGTTGACTGTTGCATCCGCTATCATGCTCTGTTTGGAGATTTGGTACAGCCAAGGGCTGGTGCTGATATCAGGGCTTCTCGCCAATCCTACCATCGCACTGGACTCCATTTCTATTTGCATGAACTACTTGAACTGGGACATGCAATTTATGTTAGGGCTAGCCGCGGCAGCCAGTGTTCGAGTCAGTAACGAGCTCGGTGCCGGCAACGGGAAGGTGGCCAAGTTTTCGGTGTTTGTAGTGAACGGGACGAGCATACTGATTAGCATAATCTTCACCGCGATTATATTGATATTCCGAGTCGCACTAAGCAAGCTTTTTACGAGCGACGACGAGGTTGTCACGGCGGTATCGAATTTAACCCCACTGCTGGCCATCTCTGTTTTCTTGAATGGCATTCAACCTATACTCTCAGGGGTGGCGATCGGAAGTGGATGGCAAGCTGTTGTGGCGTATGTTAACCTGACATGTTACTACATTATCGGTCTTCCAATCGGATGTGTTCTGGGCTTCAAAACCAGCATGGGAGTAGCAGGTATTTGGTGGGGTTTGATCATTGGAGTTTTTCTACAAACAGTAACTCTAATTGTTCTCACTGCAAGAACAAACTGGACTGCTGAGGTTGAAAAAACGGCTGAACGATTGAAGAGATCTGCAAGTGCAGAACGATTGAAGAGATCTGCAAGTGCAGAAAGATTAGACTTGGTGACCGATATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0015075 GO:0015077 GO:0015078 GO:0015238 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015672 GO:0015893 GO:0016020 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0021700 GO:0022414 GO:0022611 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0032501 GO:0032502 GO:0032504 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071695 GO:0071704 GO:0097437 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

515

Amino Acids

55.99

Weight (kDa)

6.94

Isoelectric Point (pI)

23.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	60 - 219	9e-29	MatE
MatE	PF01554	281 - 441	1.1e-25	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59030 AT3G59030
fragaria_vesca	FvH4_2g14370 FvH4_2g14370 FvH4_2g26470 FvH4_2g26470 FvH4_2g26470 FvH4_6g37810 FvH4_6g38980 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010
malus_domestica	MD09G1145600.v1.1 MD17G1131800.v1.1 MD17G1132100.v1.1
prunus_persica	Prupe.3G180200_v2.0.a1 Prupe.3G180400_v2.0.a1 Prupe.3G180900_v2.0.a1
pyrus_communis	pycom09g06590 pycom17g12460 pycom17g12550
rosa_chinensis	RchiOBHm_Chr2g0152571 RchiOBHm_Chr2g0152611 RchiOBHm_Chr6g0295151
rosa_laevigata	RLG00000011817 RLG00000013373 RLG00000020516 RLG00000020647 RLG00000020650
rosa_multiflora	Rmu_co8487657.1_g000001 Rmu_sc0000185.1_g000024 Rmu_ssc0000233.1_g000025
rosa_roxburghii	Rroxscaffold_171G00441390 Rroxscaffold_2G00095540 Rroxscaffold_2G00096850 Rroxscaffold_7G00172690 Rroxscaffold_7G00192070
rosa_rugosa	Rorug02G0423200 Rorug02G0434600 Rorug02G0434900 Rorug02G0434900 Rorug06G0249500
rosa_samantha	Rh2AG483600 Rh2AG495900 Rh2AG496600 Rh2BG495900 Rh2BG507700 Rh2BG508200 Rh2CG469800 Rh2CG482100 Rh2CG482600 Rh2DG506900 Rh2DG519800 Rh6AG362500 Rh6CG221100 Rh6DG363300
rosa_wichuraiana	Rw0G004840 Rw2G039630 Rw2G040800 Rw2G040840 Rw2G041230 Rw2G041260 Rw6G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1163
Acc36I	ACCTGC	1 cut(s)	1349
AccB1I	GGYRCC	2 cut(s)	263, 1025
AccB7I	CCANNNNNTGG	1 cut(s)	883
AccII	CGCG	2 cut(s)	992, 1106
AciI	CCGC	8 cut(s)	26, 671, 692, 843, 990, 992, 1104, 1172
AcoI	YGGCCR	3 cut(s)	478, 1044, 1197
AcsI	RAATTY	2 cut(s)	285, 1180
AfaI	GTAC	3 cut(s)	20, 446, 872
AfiI	CCNNNNNNNGG	6 cut(s)	380, 415, 487, 883, 1035, 1195
AflIII	ACRYGT	1 cut(s)	1292
AgsI	TTSAA	9 cut(s)	86, 199, 958, 1216, 1226, 1339, 1451, 1471, 1498
AhdI	GACNNNNNGTC	1 cut(s)	70
AjnI	CCWGG	1 cut(s)	93
AluBI	AGCT	6 cut(s)	213, 256, 538, 1021, 1141, 1268
AluI	AGCT	6 cut(s)	213, 256, 538, 1021, 1141, 1268
Alw21I	GWGCWC	2 cut(s)	102, 1023
Alw26I	GTCTC	2 cut(s)	193, 767
AoxI	GGCC	5 cut(s)	478, 798, 815, 1044, 1197
ApeKI	GCWGC	2 cut(s)	422, 995
ApoI	RAATTY	2 cut(s)	285, 1180
AspS9I	GGNCC	1 cut(s)	458
AsuC2I	CCSGG	1 cut(s)	55
AsuHPI	GGTGA	2 cut(s)	1093, 1543
AsuNHI	GCTAGC	1 cut(s)	985
AvaII	GGWCC	1 cut(s)	458
BaeI	ACNNNNGTAYC	2 cut(s)	1158, 1191
BalI	TGGCCA	3 cut(s)	480, 1046, 1199
BanI	GGYRCC	2 cut(s)	263, 1025
BanII	GRGCYC	1 cut(s)	1023
BbsI	GAAGAC	1 cut(s)	1304
Bbv12I	GWGCWC	2 cut(s)	102, 1023
BbvCI	CCTCAGC	2 cut(s)	564, 1443
BbvI	GCAGC	2 cut(s)	434, 1007
BccI	CCATC	3 cut(s)	926, 1208, 1254
BceAI	ACGGC	4 cut(s)	24, 65, 1185, 1473
BcgI	CGANNNNNNTGC	2 cut(s)	1007, 1041
BciT130I	CCWGG	1 cut(s)	95
BciVI	GTATCC	1 cut(s)	381
BclI	TGATCA	1 cut(s)	1377
BcnI	CCSGG	1 cut(s)	55
BcoDI	GTCTC	2 cut(s)	193, 767
BfaI	CTAG	1 cut(s)	986
BfuAI	ACCTGC	1 cut(s)	1349
BfuI	GTATCC	1 cut(s)	381
BglII	AGATCT	2 cut(s)	1475, 1502
BisI	GCNGC	5 cut(s)	423, 693, 990, 993, 996
BlpI	GCTNAGC	1 cut(s)	209
BlsI	GCNGC	5 cut(s)	424, 694, 991, 994, 997
Bme1390I	CCNGG	2 cut(s)	55, 95
Bme18I	GGWCC	1 cut(s)	458
BmeRI	GACNNNNNGTC	1 cut(s)	70
BmgT120I	GGNCC	1 cut(s)	458
BmiI	GGNNCC	3 cut(s)	265, 361, 1027
BmrFI	CCNGG	2 cut(s)	55, 95
BmrI	ACTGGG	1 cut(s)	970
BmsI	GCATC	1 cut(s)	848
BmtI	GCTAGC	1 cut(s)	989
BmuI	ACTGGG	1 cut(s)	970
BpiI	GAAGAC	1 cut(s)	1304
BpmI	CTGGAG	1 cut(s)	116
Bpu10I	CCTNAGC	3 cut(s)	128, 564, 1443
Bpu1102I	GCTNAGC	1 cut(s)	209
BpuMI	CCSGG	1 cut(s)	55
BsaJI	CCNNGG	3 cut(s)	249, 877, 990
BsaXI	ACNNNNNCTCC	4 cut(s)	411, 441, 854, 884
Bsc4I	CCNNNNNNNGG	6 cut(s)	380, 415, 487, 883, 1035, 1195
Bse118I	RCCGGY	1 cut(s)	1028
Bse1I	ACTGG	7 cut(s)	276, 452, 787, 930, 965, 999, 1439
Bse3DI	GCAATG	1 cut(s)	384
BseBI	CCWGG	1 cut(s)	95
BseDI	CCNNGG	3 cut(s)	249, 877, 990
BseGI	GGATG	3 cut(s)	839, 1265, 1328
BseLI	CCNNNNNNNGG	6 cut(s)	380, 415, 487, 883, 1035, 1195
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	6 cut(s)	223, 578, 661, 695, 1251, 1434
BseNI	ACTGG	7 cut(s)	276, 452, 787, 930, 965, 999, 1439
BseXI	GCAGC	2 cut(s)	434, 1007
BsgI	GTGCAG	3 cut(s)	395, 1506, 1533
Bsh1236I	CGCG	2 cut(s)	992, 1106
Bsh1285I	CGRYCG	1 cut(s)	1251
BshFI	GGCC	5 cut(s)	480, 800, 817, 1046, 1199
BshNI	GGYRCC	2 cut(s)	263, 1025
BsiEI	CGRYCG	1 cut(s)	1251
BsiHKAI	GWGCWC	2 cut(s)	102, 1023
BsiSI	CCGG	3 cut(s)	55, 171, 1029
BslFI	GGGAC	5 cut(s)	19, 515, 519, 977, 1087
BslI	CCNNNNNNNGG	6 cut(s)	380, 415, 487, 883, 1035, 1195
BsmAI	GTCTC	2 cut(s)	193, 767
BsmBI	CGTCTC	1 cut(s)	193
BsmFI	GGGAC	5 cut(s)	19, 515, 519, 977, 1087
BsmI	GAATGC	1 cut(s)	1221
BsnI	GGCC	5 cut(s)	480, 800, 817, 1046, 1199
Bsp1286I	GDGCHC	2 cut(s)	102, 1023
Bsp143I	GATC	4 cut(s)	1248, 1377, 1475, 1502
Bsp1720I	GCTNAGC	1 cut(s)	209
BspACI	CCGC	8 cut(s)	26, 671, 692, 843, 990, 992, 1104, 1172
BspANI	GGCC	5 cut(s)	480, 800, 817, 1046, 1199
BspCNI	CTCAG	6 cut(s)	222, 577, 660, 696, 1250, 1435
BspFNI	CGCG	2 cut(s)	992, 1106
BspLI	GGNNCC	3 cut(s)	265, 361, 1027
BspMI	ACCTGC	1 cut(s)	1349
BspOI	GCTAGC	1 cut(s)	989
BspT107I	GGYRCC	2 cut(s)	263, 1025
BsrDI	GCAATG	1 cut(s)	384
BsrFI	RCCGGY	1 cut(s)	1028
BsrI	ACTGG	7 cut(s)	276, 452, 787, 930, 965, 999, 1439
BssAI	RCCGGY	1 cut(s)	1028
BssECI	CCNNGG	3 cut(s)	249, 877, 990
BssMI	GATC	4 cut(s)	1248, 1377, 1475, 1502
BssT1I	CCWWGG	2 cut(s)	249, 877
Bst2UI	CCWGG	1 cut(s)	95
Bst4CI	ACNGT	4 cut(s)	340, 369, 835, 1402
Bst6I	CTCTTC	4 cut(s)	9, 81, 1466, 1493
BstC8I	GCNNGC	7 cut(s)	258, 351, 987, 1030, 1139, 1197, 1266
BstDEI	CTNAG	8 cut(s)	128, 209, 564, 647, 704, 1133, 1237, 1443
BstDSI	CCRYGG	1 cut(s)	990
BstEII	GGTNACC	1 cut(s)	1531
BstF5I	GGATG	3 cut(s)	839, 1265, 1328
BstFNI	CGCG	2 cut(s)	992, 1106
BstKTI	GATC	4 cut(s)	1251, 1380, 1478, 1505
BstMAI	GTCTC	2 cut(s)	193, 767
BstMBI	GATC	4 cut(s)	1248, 1377, 1475, 1502
BstMCI	CGRYCG	1 cut(s)	1251
BstMWI	GCNNNNNNNGC	4 cut(s)	272, 359, 995, 1274
BstNI	CCWGG	1 cut(s)	95
BstNSI	RCATGY	3 cut(s)	208, 970, 1296
BstPI	GGTNACC	1 cut(s)	1531
BstSCI	CCNGG	2 cut(s)	53, 93
BstUI	CGCG	2 cut(s)	992, 1106
BstV1I	GCAGC	2 cut(s)	434, 1007
BstV2I	GAAGAC	1 cut(s)	1304
BstX2I	RGATCY	2 cut(s)	1475, 1502
BstXI	CCANNNNNNTGG	1 cut(s)	925
BstYI	RGATCY	2 cut(s)	1475, 1502
BsuI	GTATCC	1 cut(s)	381
BsuRI	GGCC	5 cut(s)	480, 800, 817, 1046, 1199
BtgI	CCRYGG	1 cut(s)	990
BtgZI	GCGATG	1 cut(s)	904
BtsCI	GGATG	3 cut(s)	839, 1265, 1328
BtsI	GCAGTG	3 cut(s)	75, 1190, 1419
BtsIMutI	CAGTG	7 cut(s)	75, 283, 345, 923, 1006, 1190, 1419
BveI	ACCTGC	1 cut(s)	1349
Cac8I	GCNNGC	7 cut(s)	258, 351, 987, 1030, 1139, 1197, 1266
Cfr10I	RCCGGY	1 cut(s)	1028
Cfr13I	GGNCC	1 cut(s)	458
Cfr42I	CCGCGG	1 cut(s)	993
Csp6I	GTAC	3 cut(s)	19, 445, 871
CspCI	CAANNNNNGTGG	2 cut(s)	64, 99
CviAII	CATG	9 cut(s)	141, 205, 226, 714, 850, 946, 967, 1293, 1348
CviQI	GTAC	3 cut(s)	19, 445, 871
DdeI	CTNAG	8 cut(s)	128, 209, 564, 647, 704, 1133, 1237, 1443
DpnI	GATC	4 cut(s)	1250, 1379, 1477, 1504
DpnII	GATC	4 cut(s)	1248, 1377, 1475, 1502
DrdI	GACNNNNNNGTC	1 cut(s)	1163
DriI	GACNNNNNGTC	1 cut(s)	70
DseDI	GACNNNNNNGTC	1 cut(s)	1163
EaeI	YGGCCR	3 cut(s)	478, 1044, 1197
Eam1104I	CTCTTC	4 cut(s)	9, 81, 1466, 1493
Eam1105I	GACNNNNNGTC	1 cut(s)	70
EarI	CTCTTC	4 cut(s)	9, 81, 1466, 1493
EciI	GGCGGA	1 cut(s)	686
Ecl136II	GAGCTC	1 cut(s)	1021
Eco130I	CCWWGG	2 cut(s)	249, 877
Eco147I	AGGCCT	1 cut(s)	800
Eco24I	GRGCYC	1 cut(s)	1023
Eco32I	GATATC	1 cut(s)	894
Eco47I	GGWCC	1 cut(s)	458
Eco53kI	GAGCTC	1 cut(s)	1021
Eco91I	GGTNACC	1 cut(s)	1531
EcoICRI	GAGCTC	1 cut(s)	1021
EcoO65I	GGTNACC	1 cut(s)	1531
EcoRI	GAATTC	1 cut(s)	285
EcoRII	CCWGG	1 cut(s)	93
EcoRV	GATATC	1 cut(s)	894
EcoT14I	CCWWGG	2 cut(s)	249, 877
EcoT22I	ATGCAT	1 cut(s)	547
EcoT38I	GRGCYC	1 cut(s)	1023
ErhI	CCWWGG	2 cut(s)	249, 877
Esp3I	CGTCTC	1 cut(s)	193
FaeI	CATG	9 cut(s)	144, 208, 229, 717, 853, 949, 970, 1296, 1351
FaqI	GGGAC	5 cut(s)	19, 515, 519, 977, 1087
FatI	CATG	9 cut(s)	140, 204, 225, 713, 849, 945, 966, 1292, 1347
FauNDI	CATATG	2 cut(s)	355, 389
FbaI	TGATCA	1 cut(s)	1377
Fnu4HI	GCNGC	5 cut(s)	423, 693, 990, 993, 996
FokI	GGATG	3 cut(s)	826, 1272, 1335
FriOI	GRGCYC	1 cut(s)	1023
Fsp4HI	GCNGC	5 cut(s)	423, 693, 990, 993, 996
FspBI	CTAG	1 cut(s)	986
GluI	GCNGC	5 cut(s)	423, 693, 990, 993, 996
GsuI	CTGGAG	1 cut(s)	116
HaeIII	GGCC	5 cut(s)	480, 800, 817, 1046, 1199
HapII	CCGG	3 cut(s)	55, 171, 1029
Hin1II	CATG	9 cut(s)	144, 208, 229, 717, 853, 949, 970, 1296, 1351
HincII	GTYRAC	3 cut(s)	598, 831, 1285
HindII	GTYRAC	3 cut(s)	598, 831, 1285
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	8 cut(s)	39, 44, 58, 146, 384, 929, 1008, 1125
HpaI	GTTAAC	1 cut(s)	1285
HpaII	CCGG	3 cut(s)	55, 171, 1029
HphI	GGTGA	2 cut(s)	1093, 1543
Hpy166II	GTNNAC	6 cut(s)	75, 598, 637, 831, 1069, 1285
Hpy188I	TCNGA	4 cut(s)	705, 1124, 1253, 1322
Hpy188III	TCNNGA	2 cut(s)	62, 1213
Hpy8I	GTNNAC	6 cut(s)	75, 598, 637, 831, 1069, 1285
Hpy99I	CGWCG	2 cut(s)	1157, 1160
HpyAV	CCTTC	2 cut(s)	790, 1033
HpyCH4III	ACNGT	4 cut(s)	340, 369, 835, 1402
HpyF10VI	GCNNNNNNNGC	4 cut(s)	272, 359, 995, 1274
HpyF3I	CTNAG	8 cut(s)	128, 209, 564, 647, 704, 1133, 1237, 1443
Hsp92II	CATG	9 cut(s)	144, 208, 229, 717, 853, 949, 970, 1296, 1351
KroI	GCCGGC	1 cut(s)	1028
KroNI	GCCGGC	1 cut(s)	1030
Ksp22I	TGATCA	1 cut(s)	1377
KspAI	GTTAAC	1 cut(s)	1285
KspI	CCGCGG	1 cut(s)	993
Kzo9I	GATC	4 cut(s)	1248, 1377, 1475, 1502
LmnI	GCTCC	4 cut(s)	97, 253, 359, 419
Lsp1109I	GCAGC	2 cut(s)	434, 1007
LweI	GCATC	1 cut(s)	848
MaeI	CTAG	1 cut(s)	986
MaeIII	GTNAC	5 cut(s)	1013, 1165, 1295, 1402, 1531
MalI	GATC	4 cut(s)	1250, 1379, 1477, 1504
MboI	GATC	4 cut(s)	1248, 1377, 1475, 1502
MboII	GAAGA	6 cut(s)	26, 98, 1090, 1304, 1483, 1510
MflI	RGATCY	2 cut(s)	1475, 1502
MhlI	GDGCHC	2 cut(s)	102, 1023
MlsI	TGGCCA	3 cut(s)	480, 1046, 1199
MluCI	AATT	4 cut(s)	285, 971, 1180, 1410
MluNI	TGGCCA	3 cut(s)	480, 1046, 1199
MlyI	GAGTC	6 cut(s)	33, 38, 155, 923, 1017, 1134
Mox20I	TGGCCA	3 cut(s)	480, 1046, 1199
Mph1103I	ATGCAT	1 cut(s)	547
MroNI	GCCGGC	1 cut(s)	1028
MscI	TGGCCA	3 cut(s)	480, 1046, 1199
MseI	TTAA	4 cut(s)	33, 825, 1184, 1284
MslI	CAYNNNNRTG	2 cut(s)	224, 243
Msp20I	TGGCCA	3 cut(s)	480, 1046, 1199
MspA1I	CMGCKG	1 cut(s)	992
MspI	CCGG	3 cut(s)	55, 171, 1029
MspR9I	CCNGG	2 cut(s)	55, 95
Mva1269I	GAATGC	1 cut(s)	1221
MvaI	CCWGG	1 cut(s)	95
MvnI	CGCG	2 cut(s)	992, 1106
MwoI	GCNNNNNNNGC	4 cut(s)	272, 359, 995, 1274
NaeI	GCCGGC	1 cut(s)	1030
NciI	CCSGG	1 cut(s)	55
NdeI	CATATG	2 cut(s)	355, 389
NdeII	GATC	4 cut(s)	1248, 1377, 1475, 1502
NgoMIV	GCCGGC	1 cut(s)	1028
NheI	GCTAGC	1 cut(s)	985
NlaIII	CATG	9 cut(s)	144, 208, 229, 717, 853, 949, 970, 1296, 1351
NlaIV	GGNNCC	3 cut(s)	265, 361, 1027
NmeAIII	GCCGAG	1 cut(s)	523
NmuCI	GTSAC	2 cut(s)	1165, 1531
NsiI	ATGCAT	1 cut(s)	547
NspI	RCATGY	3 cut(s)	208, 970, 1296
PceI	AGGCCT	1 cut(s)	800
PciI	ACATGT	1 cut(s)	1292
PcsI	WCGNNNNNNNCGW	1 cut(s)	1175
PctI	GAATGC	1 cut(s)	1221
PdiI	GCCGGC	1 cut(s)	1030
PfeI	GAWTC	2 cut(s)	58, 384
PflMI	CCANNNNNTGG	1 cut(s)	883
PfoI	TCCNGGA	2 cut(s)	53, 93
PkrI	GCNGC	5 cut(s)	424, 694, 991, 994, 997
Ple19I	CGATCG	1 cut(s)	1251
PleI	GAGTC	6 cut(s)	33, 38, 154, 923, 1016, 1133
PpsI	GAGTC	6 cut(s)	33, 38, 154, 923, 1016, 1133
PscI	ACATGT	1 cut(s)	1292
Psp124BI	GAGCTC	1 cut(s)	1023
Psp6I	CCWGG	1 cut(s)	93
PspEI	GGTNACC	1 cut(s)	1531
PspGI	CCWGG	1 cut(s)	93
PspN4I	GGNNCC	3 cut(s)	265, 361, 1027
PspPI	GGNCC	1 cut(s)	458
PsuI	RGATCY	2 cut(s)	1475, 1502
PvuI	CGATCG	1 cut(s)	1251
RsaI	GTAC	3 cut(s)	20, 446, 872
RsaNI	GTAC	3 cut(s)	19, 445, 871
RseI	CAYNNNNRTG	2 cut(s)	224, 243
SacI	GAGCTC	1 cut(s)	1023
SacII	CCGCGG	1 cut(s)	993
SaqAI	TTAA	4 cut(s)	33, 825, 1184, 1284
SatI	GCNGC	5 cut(s)	423, 693, 990, 993, 996
Sau3AI	GATC	4 cut(s)	1248, 1377, 1475, 1502
Sau96I	GGNCC	1 cut(s)	458
SchI	GAGTC	6 cut(s)	33, 38, 155, 923, 1017, 1134
ScrFI	CCNGG	2 cut(s)	55, 95
SduI	GDGCHC	2 cut(s)	102, 1023
SfaNI	GCATC	1 cut(s)	848
Sfr303I	CCGCGG	1 cut(s)	993
SgrBI	CCGCGG	1 cut(s)	993
SinI	GGWCC	1 cut(s)	458
SmiMI	CAYNNNNRTG	2 cut(s)	224, 243
Sse9I	AATT	4 cut(s)	285, 971, 1180, 1410
SseBI	AGGCCT	1 cut(s)	800
SsiI	CCGC	8 cut(s)	26, 671, 692, 843, 990, 992, 1104, 1172
SspMI	CTAG	1 cut(s)	986
SstI	GAGCTC	1 cut(s)	1023
StuI	AGGCCT	1 cut(s)	800
StyD4I	CCNGG	2 cut(s)	53, 93
StyI	CCWWGG	2 cut(s)	249, 877
TaaI	ACNGT	4 cut(s)	340, 369, 835, 1402
TaqI	TCGA	3 cut(s)	42, 1006, 1178
TaqII	GACCGA	1 cut(s)	1298
TasI	AATT	4 cut(s)	285, 971, 1180, 1410
TatI	WGTACW	1 cut(s)	444
TauI	GCSGC	3 cut(s)	695, 992, 995
TfiI	GAWTC	2 cut(s)	58, 384
Tru1I	TTAA	4 cut(s)	33, 825, 1184, 1284
Tru9I	TTAA	4 cut(s)	33, 825, 1184, 1284
TscAI	CASTG	7 cut(s)	82, 283, 345, 930, 1006, 1197, 1426
TseFI	GTSAC	2 cut(s)	1165, 1531
TseI	GCWGC	2 cut(s)	422, 995
Tsp45I	GTSAC	2 cut(s)	1165, 1531
TspDTI	ATGAA	1 cut(s)	962
TspGWI	ACGGA	1 cut(s)	51
TspRI	CASTG	7 cut(s)	82, 283, 345, 930, 1006, 1197, 1426
Van91I	CCANNNNNTGG	1 cut(s)	883
VpaK11BI	GGWCC	1 cut(s)	458
XapI	RAATTY	2 cut(s)	285, 1180
XceI	RCATGY	3 cut(s)	208, 970, 1296
XspI	CTAG	1 cut(s)	986
Zsp2I	ATGCAT	1 cut(s)	547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.