Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000941

Physical Location & Seq

Genomic Coordinates Reverse (-)

67125142 .. 67127543

Gene Structure 2402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020650

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGGATCCGAAGAGGAGCGGCCGCTACTACACGGAATTGACTCTCCGACGTCTCGCATTTCTGACCTGTCGTCCACCGTGATCGAAGAATTTCTAGAACAACCGCGGCGGGTGGCAGTTCGATGCTGGGCTCGGCTGGTTGCTTGGGAGTCAAGGCTCCTCTGGCTTTTATCTGGATCATCAATTGCTGTTTCTGTATTCAATTATATGTTGAGTTTCGTCACTCTCATATTTTGTGGGCAAATGAGCGCTTTGGAGCTCGCTGGTGCCTCGATTGCTAGTGTTGGAATACAAGGTCTTGCTTATGGAATCATGTTGGGCATGGCAAGTGCTGTACAAACAGTTTGTGGGCAAGCCTATGGAGCAAAACGCTTGTCAGCAATGGGGATCATATGCCAAAGAGCAATCATTTTGCACTTGGGAGCTGCAATCCTCCTCACACCTGTGTACTGGTGGTCCGGCCCAATACTCATCGCCATCGGCCAATCAGAGGACATAGCAGGGCAGGGTCAAATCTTTGCACGCGGCCTGATCCCTCAACTCTATGCATTTGCCATAAACTGCCCACAACAGAGGTTCCTTCAAGCACAGAACATAGTGAACCCTTTGGCATACATCTCTACGGGAGTTTTCACCCTTCACATTCTTCTCAGTTGGCTAGTGGTATATGTTGCTGACTATGGACTAACTGGTGCTGCTCTTACACTGAGTTTTTCTTGGTGGTTGCTTGTTTTAATATGTGGGATTTACATTCTTGTAAGCCCCAACTGCAAGGAAACTTGGACCGGCTTCTCTTGGAAAGCTTTCAATGGAATTTGGCCTTATTTAAAGTTGACTGTCGCCTCTGCCGTCATGCTGTGTTTGGAGATATGGTACAACCAAGGACTAACCCTGATATCTGGGCTCCTCCCCAACCCTACAATATCTCTAGATTCCCTTTCAATTTGTATGAATTACTGGTGCTGGAGTCTGCAGTTTATGTTAGGATTAAGTGCAGCAGCCAGTGTTAGAGTGAGTAATGAGCTAGGGGCAGGTAATCCAAAGGTGGCCAAATTTTCGGTTTTTGTAGTGACCGCTACAAGCATCCTGATTAGTGTAGTCTTCACTGCAATCATTTTGATATTCCAAATTGGATTAAGCAAGCTGTTTACAAGCGACCCCGAGGTTATCGAAGCAGTGATTGAGTTAATTCCGATGCTGGCTATCTCTGTTTTTTTGAATGGCATCCAACCTATACTCTCAGGTGTGGCAATTGGAAGCGGATGGCAAGACATCGTGGCTTATGTTAACGTCATTTGTTTCTATATCATTGGACTCCCAATTGGATGTGTTCTTGGCTTCAAAACTGATATGGGAGTAGCAGGCATTTGGTGGGGGATGATTGTGGGCGTTGGTTTACAAACAATAACTCTAATTATTCTCACTGCCAGAACAAATTGGAATGCTGAGGTTGTGAAAGCTGCTGATCGCTTGAAAAGATCTGCAAGTGAAGAAATCTTGAACTTGGTGGGGGCTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0015075 GO:0015077 GO:0015078 GO:0015238 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015672 GO:0015893 GO:0016020 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0021700 GO:0022414 GO:0022611 GO:0022804 GO:0022857 GO:0022890 GO:0031090 GO:0032501 GO:0032502 GO:0032504 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071695 GO:0071704 GO:0097437 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

507

Amino Acids

54.84

Weight (kDa)

5.99

Isoelectric Point (pI)

33.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	62 - 220	5e-26	MatE
MatE	PF01554	282 - 442	1.9e-28	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59030 AT3G59030
fragaria_vesca	FvH4_2g14370 FvH4_2g14370 FvH4_2g26470 FvH4_2g26470 FvH4_2g26470 FvH4_6g37810 FvH4_6g38980 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010 FvH4_6g39010
malus_domestica	MD09G1145600.v1.1 MD17G1131800.v1.1 MD17G1132100.v1.1
prunus_persica	Prupe.3G180200_v2.0.a1 Prupe.3G180400_v2.0.a1 Prupe.3G180900_v2.0.a1
pyrus_communis	pycom09g06590 pycom17g12460 pycom17g12550
rosa_chinensis	RchiOBHm_Chr2g0152571 RchiOBHm_Chr2g0152611 RchiOBHm_Chr6g0295151
rosa_laevigata	RLG00000011817 RLG00000013373 RLG00000020516 RLG00000020647 RLG00000020650
rosa_multiflora	Rmu_co8487657.1_g000001 Rmu_sc0000185.1_g000024 Rmu_ssc0000233.1_g000025
rosa_roxburghii	Rroxscaffold_171G00441390 Rroxscaffold_2G00095540 Rroxscaffold_2G00096850 Rroxscaffold_7G00172690 Rroxscaffold_7G00192070
rosa_rugosa	Rorug02G0423200 Rorug02G0434600 Rorug02G0434900 Rorug02G0434900 Rorug06G0249500
rosa_samantha	Rh2AG483600 Rh2AG495900 Rh2AG496600 Rh2BG495900 Rh2BG507700 Rh2BG508200 Rh2CG469800 Rh2CG482100 Rh2CG482600 Rh2DG506900 Rh2DG519800 Rh6AG362500 Rh6CG221100 Rh6DG363300
rosa_wichuraiana	Rw0G004840 Rw2G039630 Rw2G040800 Rw2G040840 Rw2G041230 Rw2G041260 Rw6G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	53
Acc36I	ACCTGC	1 cut(s)	1022
AccB1I	GGYRCC	1 cut(s)	266
AccBSI	CCGCTC	1 cut(s)	19
AccII	CGCG	2 cut(s)	106, 525
AciI	CCGC	8 cut(s)	19, 23, 104, 106, 109, 525, 1074, 1260
AclWI	GGATC	4 cut(s)	13, 184, 395, 526
AcoI	YGGCCR	3 cut(s)	20, 481, 1047
AcsI	RAATTY	3 cut(s)	89, 813, 1052
AcyI	GRCGYC	1 cut(s)	50
AfaI	GTAC	3 cut(s)	336, 449, 875
AfeI	AGCGCT	1 cut(s)	250
AfiI	CCNNNNNNNGG	1 cut(s)	490
AgsI	TTSAA	8 cut(s)	202, 584, 808, 942, 1219, 1342, 1474, 1501
AhdI	GACNNNNNGTC	1 cut(s)	70
AleI	CACNNNNGTG	1 cut(s)	443
AluBI	AGCT	6 cut(s)	259, 425, 803, 1024, 1144, 1460
AluI	AGCT	6 cut(s)	259, 425, 803, 1024, 1144, 1460
Alw21I	GWGCWC	1 cut(s)	261
Alw26I	GTCTC	1 cut(s)	57
AlwI	GGATC	4 cut(s)	13, 184, 395, 526
Ama87I	CYCGRG	1 cut(s)	1160
Aor51HI	AGCGCT	1 cut(s)	250
AoxI	GGCC	6 cut(s)	20, 460, 481, 526, 818, 1047
ApeKI	GCWGC	5 cut(s)	425, 695, 995, 998, 1460
ApoI	RAATTY	3 cut(s)	89, 813, 1052
ArsI	GACNNNNNNTTYG	2 cut(s)	359, 391
Asp700I	GAANNNNTTC	2 cut(s)	90, 803
AspLEI	GCGC	1 cut(s)	251
AspS9I	GGNCC	3 cut(s)	456, 461, 783
AsuHPI	GGTGA	1 cut(s)	625
AvaI	CYCGRG	1 cut(s)	1160
AvaII	GGWCC	2 cut(s)	456, 783
BalI	TGGCCA	1 cut(s)	1049
BamHI	GGATCC	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	266
BanII	GRGCYC	3 cut(s)	133, 261, 906
BbsI	GAAGAC	1 cut(s)	1093
Bbv12I	GWGCWC	1 cut(s)	261
BbvCI	CCTCAGC	1 cut(s)	1446
BbvI	GCAGC	5 cut(s)	412, 682, 1007, 1010, 1447
BccI	CCATC	2 cut(s)	485, 1257
BceAI	ACGGC	1 cut(s)	833
BcoDI	GTCTC	1 cut(s)	57
BfaI	CTAG	5 cut(s)	95, 279, 659, 929, 1025
BfmI	CTRYAG	1 cut(s)	971
BfoI	RGCGCY	1 cut(s)	252
BfuAI	ACCTGC	1 cut(s)	1022
BglII	AGATCT	1 cut(s)	1478
BisI	GCNGC	9 cut(s)	20, 23, 107, 426, 526, 696, 996, 999, 1461
BlsI	GCNGC	9 cut(s)	21, 24, 108, 427, 527, 697, 997, 1000, 1462
Bme18I	GGWCC	2 cut(s)	456, 783
BmeRI	GACNNNNNGTC	1 cut(s)	70
BmeT110I	CYCGRG	1 cut(s)	1160
BmgT120I	GGNCC	3 cut(s)	456, 461, 783
BmiI	GGNNCC	5 cut(s)	7, 158, 268, 578, 905
BmsI	GCATC	4 cut(s)	113, 1092, 1185, 1233
BpiI	GAAGAC	1 cut(s)	1093
BpmI	CTGGAG	1 cut(s)	985
Bpu10I	CCTNAGC	1 cut(s)	1446
BsaHI	GRCGYC	1 cut(s)	50
BsaJI	CCNNGG	3 cut(s)	104, 880, 1161
BsaXI	ACNNNNNCTCC	2 cut(s)	857, 887
Bsc4I	CCNNNNNNNGG	1 cut(s)	490
Bse118I	RCCGGY	1 cut(s)	785
Bse1I	ACTGG	4 cut(s)	455, 694, 962, 1002
Bse3DI	GCAATG	1 cut(s)	387
BseDI	CCNNGG	3 cut(s)	104, 880, 1161
BseGI	GGATG	5 cut(s)	1083, 1224, 1268, 1331, 1383
BseLI	CCNNNNNNNGG	1 cut(s)	490
BseMI	GCAATG	1 cut(s)	387
BseMII	CTCAG	4 cut(s)	664, 698, 1254, 1437
BseNI	ACTGG	4 cut(s)	455, 694, 962, 1002
BseRI	GAGGAG	4 cut(s)	29, 149, 425, 896
BseX3I	CGGCCG	1 cut(s)	20
BseXI	GCAGC	5 cut(s)	412, 682, 1007, 1010, 1447
BseYI	CCCAGC	1 cut(s)	126
BsgI	GTGCAG	1 cut(s)	1014
Bsh1236I	CGCG	2 cut(s)	106, 525
Bsh1285I	CGRYCG	1 cut(s)	23
BshFI	GGCC	6 cut(s)	22, 462, 483, 528, 820, 1049
BshNI	GGYRCC	1 cut(s)	266
BsiEI	CGRYCG	1 cut(s)	23
BsiHKAI	GWGCWC	1 cut(s)	261
BsiHKCI	CYCGRG	1 cut(s)	1160
BsiSI	CCGG	2 cut(s)	459, 786
BslI	CCNNNNNNNGG	1 cut(s)	490
BsmAI	GTCTC	1 cut(s)	57
BsmBI	CGTCTC	1 cut(s)	57
BsmI	GAATGC	1 cut(s)	1447
BsnI	GGCC	6 cut(s)	22, 462, 483, 528, 820, 1049
BsoBI	CYCGRG	1 cut(s)	1160
Bsp1286I	GDGCHC	3 cut(s)	133, 261, 906
Bsp1407I	TGTACA	1 cut(s)	334
Bsp143I	GATC	7 cut(s)	5, 81, 176, 387, 531, 1465, 1478
BspACI	CCGC	8 cut(s)	19, 23, 104, 106, 109, 525, 1074, 1260
BspANI	GGCC	6 cut(s)	22, 462, 483, 528, 820, 1049
BspCNI	CTCAG	4 cut(s)	663, 699, 1253, 1438
BspFNI	CGCG	2 cut(s)	106, 525
BspLI	GGNNCC	5 cut(s)	7, 158, 268, 578, 905
BspMAI	CTGCAG	1 cut(s)	975
BspMI	ACCTGC	1 cut(s)	1022
BspPI	GGATC	4 cut(s)	13, 184, 395, 526
BspT107I	GGYRCC	1 cut(s)	266
BsrBI	CCGCTC	1 cut(s)	19
BsrDI	GCAATG	1 cut(s)	387
BsrFI	RCCGGY	1 cut(s)	785
BsrGI	TGTACA	1 cut(s)	334
BsrI	ACTGG	4 cut(s)	455, 694, 962, 1002
BssAI	RCCGGY	1 cut(s)	785
BssECI	CCNNGG	3 cut(s)	104, 880, 1161
BssMI	GATC	7 cut(s)	5, 81, 176, 387, 531, 1465, 1478
BssNI	GRCGYC	1 cut(s)	50
BssT1I	CCWWGG	1 cut(s)	880
Bst4CI	ACNGT	3 cut(s)	79, 343, 838
Bst6I	CTCTTC	1 cut(s)	6
BstACI	GRCGYC	1 cut(s)	50
BstAUI	TGTACA	1 cut(s)	334
BstC8I	GCNNGC	6 cut(s)	261, 354, 523, 1142, 1200, 1363
BstDEI	CTNAG	4 cut(s)	650, 707, 1240, 1446
BstDSI	CCRYGG	1 cut(s)	104
BstF5I	GGATG	5 cut(s)	1083, 1224, 1268, 1331, 1383
BstFNI	CGCG	2 cut(s)	106, 525
BstH2I	RGCGCY	1 cut(s)	252
BstHHI	GCGC	1 cut(s)	251
BstKTI	GATC	7 cut(s)	8, 84, 179, 390, 534, 1468, 1481
BstMAI	GTCTC	1 cut(s)	57
BstMBI	GATC	7 cut(s)	5, 81, 176, 387, 531, 1465, 1478
BstMCI	CGRYCG	1 cut(s)	23
BstMWI	GCNNNNNNNGC	4 cut(s)	163, 275, 362, 768
BstSFI	CTRYAG	1 cut(s)	971
BstUI	CGCG	2 cut(s)	106, 525
BstV1I	GCAGC	5 cut(s)	412, 682, 1007, 1010, 1447
BstV2I	GAAGAC	1 cut(s)	1093
BstX2I	RGATCY	2 cut(s)	5, 1478
BstYI	RGATCY	2 cut(s)	5, 1478
BstZI	CGGCCG	1 cut(s)	20
BsuRI	GGCC	6 cut(s)	22, 462, 483, 528, 820, 1049
BtgI	CCRYGG	1 cut(s)	104
BtgZI	GCGATG	1 cut(s)	457
BtsCI	GGATG	5 cut(s)	1083, 1224, 1268, 1331, 1383
BtsI	GCAGTG	3 cut(s)	1104, 1182, 1422
BtsIMutI	CAGTG	5 cut(s)	704, 1009, 1104, 1182, 1422
BveI	ACCTGC	1 cut(s)	1022
Cac8I	GCNNGC	6 cut(s)	261, 354, 523, 1142, 1200, 1363
CciNI	GCGGCCGC	1 cut(s)	20
CfoI	GCGC	1 cut(s)	251
Cfr10I	RCCGGY	1 cut(s)	785
Cfr13I	GGNCC	3 cut(s)	456, 461, 783
Cfr42I	CCGCGG	1 cut(s)	107
Csp6I	GTAC	3 cut(s)	335, 448, 874
CviAII	CATG	3 cut(s)	313, 322, 853
CviQI	GTAC	3 cut(s)	335, 448, 874
DdeI	CTNAG	4 cut(s)	650, 707, 1240, 1446
DpnI	GATC	7 cut(s)	7, 83, 178, 389, 533, 1467, 1480
DpnII	GATC	7 cut(s)	5, 81, 176, 387, 531, 1465, 1478
DraI	TTTAAA	1 cut(s)	828
DriI	GACNNNNNGTC	1 cut(s)	70
EaeI	YGGCCR	3 cut(s)	20, 481, 1047
EagI	CGGCCG	1 cut(s)	20
Eam1104I	CTCTTC	1 cut(s)	6
Eam1105I	GACNNNNNGTC	1 cut(s)	70
EarI	CTCTTC	1 cut(s)	6
Ecl136II	GAGCTC	1 cut(s)	259
EclXI	CGGCCG	1 cut(s)	20
Eco130I	CCWWGG	1 cut(s)	880
Eco24I	GRGCYC	3 cut(s)	133, 261, 906
Eco32I	GATATC	1 cut(s)	897
Eco47I	GGWCC	2 cut(s)	456, 783
Eco47III	AGCGCT	1 cut(s)	250
Eco52I	CGGCCG	1 cut(s)	20
Eco53kI	GAGCTC	1 cut(s)	259
Eco88I	CYCGRG	1 cut(s)	1160
EcoICRI	GAGCTC	1 cut(s)	259
EcoRV	GATATC	1 cut(s)	897
EcoT14I	CCWWGG	1 cut(s)	880
EcoT22I	ATGCAT	1 cut(s)	550
EcoT38I	GRGCYC	3 cut(s)	133, 261, 906
ErhI	CCWWGG	1 cut(s)	880
Esp3I	CGTCTC	1 cut(s)	57
FaeI	CATG	3 cut(s)	316, 325, 856
FatI	CATG	3 cut(s)	312, 321, 852
FauI	CCCGC	1 cut(s)	102
FauNDI	CATATG	1 cut(s)	392
Fnu4HI	GCNGC	9 cut(s)	20, 23, 107, 426, 526, 696, 996, 999, 1461
FokI	GGATG	5 cut(s)	1070, 1211, 1275, 1338, 1390
FriOI	GRGCYC	3 cut(s)	133, 261, 906
Fsp4HI	GCNGC	9 cut(s)	20, 23, 107, 426, 526, 696, 996, 999, 1461
FspBI	CTAG	5 cut(s)	95, 279, 659, 929, 1025
GlaI	GCGC	1 cut(s)	250
GluI	GCNGC	9 cut(s)	20, 23, 107, 426, 526, 696, 996, 999, 1461
GsaI	CCCAGC	1 cut(s)	130
GsuI	CTGGAG	1 cut(s)	985
HaeII	RGCGCY	1 cut(s)	252
HaeIII	GGCC	6 cut(s)	22, 462, 483, 528, 820, 1049
HapII	CCGG	2 cut(s)	459, 786
HhaI	GCGC	1 cut(s)	251
Hin1I	GRCGYC	1 cut(s)	50
Hin1II	CATG	3 cut(s)	316, 325, 856
Hin6I	GCGC	1 cut(s)	249
HinP1I	GCGC	1 cut(s)	249
HincII	GTYRAC	2 cut(s)	834, 1288
HindII	GTYRAC	2 cut(s)	834, 1288
HindIII	AAGCTT	1 cut(s)	801
HinfI	GANTC	6 cut(s)	41, 149, 309, 932, 967, 1314
HpaI	GTTAAC	1 cut(s)	1288
HpaII	CCGG	2 cut(s)	459, 786
HphI	GGTGA	1 cut(s)	625
Hpy166II	GTNNAC	7 cut(s)	75, 448, 601, 834, 1149, 1288, 1397
Hpy188I	TCNGA	5 cut(s)	10, 48, 64, 490, 1194
Hpy188III	TCNNGA	5 cut(s)	95, 174, 929, 1087, 1498
Hpy8I	GTNNAC	7 cut(s)	75, 448, 601, 834, 1149, 1288, 1397
Hpy99I	CGWCG	1 cut(s)	52
HpyAV	CCTTC	2 cut(s)	590, 647
HpyCH4III	ACNGT	3 cut(s)	79, 343, 838
HpyCH4IV	ACGT	2 cut(s)	50, 1290
HpyCH4V	TGCA	9 cut(s)	415, 428, 521, 548, 771, 973, 995, 1109, 1484
HpyF10VI	GCNNNNNNNGC	4 cut(s)	163, 275, 362, 768
HpyF3I	CTNAG	4 cut(s)	650, 707, 1240, 1446
HpySE526I	ACGT	2 cut(s)	50, 1290
Hsp92I	GRCGYC	1 cut(s)	50
Hsp92II	CATG	3 cut(s)	316, 325, 856
HspAI	GCGC	1 cut(s)	249
KspAI	GTTAAC	1 cut(s)	1288
KspI	CCGCGG	1 cut(s)	107
Kzo9I	GATC	7 cut(s)	5, 81, 176, 387, 531, 1465, 1478
LmnI	GCTCC	6 cut(s)	16, 162, 256, 362, 422, 909
Lsp1109I	GCAGC	5 cut(s)	412, 682, 1007, 1010, 1447
LweI	GCATC	4 cut(s)	113, 1092, 1185, 1233
MaeI	CTAG	5 cut(s)	95, 279, 659, 929, 1025
MaeII	ACGT	2 cut(s)	50, 1290
MaeIII	GTNAC	2 cut(s)	220, 1069
MalI	GATC	7 cut(s)	7, 83, 178, 389, 533, 1467, 1480
MbiI	CCGCTC	1 cut(s)	19
MboI	GATC	7 cut(s)	5, 81, 176, 387, 531, 1465, 1478
MboII	GAAGA	5 cut(s)	23, 98, 638, 1093, 1502
MfeI	CAATTG	3 cut(s)	183, 1251, 1320
MflI	RGATCY	2 cut(s)	5, 1478
MhlI	GDGCHC	3 cut(s)	133, 261, 906
MlsI	TGGCCA	1 cut(s)	1049
MluNI	TGGCCA	1 cut(s)	1049
MlyI	GAGTC	4 cut(s)	35, 158, 976, 1308
MmeI	TCCRAC	3 cut(s)	71, 265, 1252
Mox20I	TGGCCA	1 cut(s)	1049
Mph1103I	ATGCAT	1 cut(s)	550
MroXI	GAANNNNTTC	2 cut(s)	90, 803
MscI	TGGCCA	1 cut(s)	1049
MseI	TTAA	6 cut(s)	734, 827, 989, 1136, 1187, 1287
MslI	CAYNNNNRTG	1 cut(s)	443
Msp20I	TGGCCA	1 cut(s)	1049
MspA1I	CMGCKG	1 cut(s)	106
MspI	CCGG	2 cut(s)	459, 786
MunI	CAATTG	3 cut(s)	183, 1251, 1320
Mva1269I	GAATGC	1 cut(s)	1447
MvnI	CGCG	2 cut(s)	106, 525
MwoI	GCNNNNNNNGC	4 cut(s)	163, 275, 362, 768
NdeI	CATATG	1 cut(s)	392
NdeII	GATC	7 cut(s)	5, 81, 176, 387, 531, 1465, 1478
NlaIII	CATG	3 cut(s)	316, 325, 856
NlaIV	GGNNCC	5 cut(s)	7, 158, 268, 578, 905
NmeAIII	GCCGAG	1 cut(s)	112
NmuCI	GTSAC	2 cut(s)	220, 1069
NotI	GCGGCCGC	1 cut(s)	20
NsiI	ATGCAT	1 cut(s)	550
OliI	CACNNNNGTG	1 cut(s)	443
PcsI	WCGNNNNNNNCGW	1 cut(s)	846
PctI	GAATGC	1 cut(s)	1447
PdmI	GAANNNNTTC	2 cut(s)	90, 803
PfeI	GAWTC	2 cut(s)	309, 932
PkrI	GCNGC	9 cut(s)	21, 24, 108, 427, 527, 697, 997, 1000, 1462
PleI	GAGTC	4 cut(s)	35, 157, 975, 1308
PpsI	GAGTC	4 cut(s)	35, 157, 975, 1308
Psp124BI	GAGCTC	1 cut(s)	261
PspFI	CCCAGC	1 cut(s)	126
PspN4I	GGNNCC	5 cut(s)	7, 158, 268, 578, 905
PspPI	GGNCC	3 cut(s)	456, 461, 783
PstI	CTGCAG	1 cut(s)	975
PsuI	RGATCY	2 cut(s)	5, 1478
RsaI	GTAC	3 cut(s)	336, 449, 875
RsaNI	GTAC	3 cut(s)	335, 448, 874
RseI	CAYNNNNRTG	1 cut(s)	443
SacI	GAGCTC	1 cut(s)	261
SacII	CCGCGG	1 cut(s)	107
SaqAI	TTAA	6 cut(s)	734, 827, 989, 1136, 1187, 1287
SatI	GCNGC	9 cut(s)	20, 23, 107, 426, 526, 696, 996, 999, 1461
Sau3AI	GATC	7 cut(s)	5, 81, 176, 387, 531, 1465, 1478
Sau96I	GGNCC	3 cut(s)	456, 461, 783
SchI	GAGTC	4 cut(s)	35, 158, 976, 1308
SduI	GDGCHC	3 cut(s)	133, 261, 906
SfaNI	GCATC	4 cut(s)	113, 1092, 1185, 1233
SfcI	CTRYAG	1 cut(s)	971
Sfr303I	CCGCGG	1 cut(s)	107
SgrBI	CCGCGG	1 cut(s)	107
SinI	GGWCC	2 cut(s)	456, 783
SmiMI	CAYNNNNRTG	1 cut(s)	443
SsiI	CCGC	8 cut(s)	19, 23, 104, 106, 109, 525, 1074, 1260
SspMI	CTAG	5 cut(s)	95, 279, 659, 929, 1025
SstI	GAGCTC	1 cut(s)	261
StyI	CCWWGG	1 cut(s)	880
TaaI	ACNGT	3 cut(s)	79, 343, 838
TaiI	ACGT	2 cut(s)	53, 1293
TaqI	TCGA	4 cut(s)	84, 121, 272, 1170
TatI	WGTACW	2 cut(s)	334, 447
TauI	GCSGC	4 cut(s)	22, 25, 109, 528
TfiI	GAWTC	2 cut(s)	309, 932
Tru1I	TTAA	6 cut(s)	734, 827, 989, 1136, 1187, 1287
Tru9I	TTAA	6 cut(s)	734, 827, 989, 1136, 1187, 1287
TscAI	CASTG	5 cut(s)	711, 1009, 1111, 1182, 1429
TseFI	GTSAC	2 cut(s)	220, 1069
TseI	GCWGC	5 cut(s)	425, 695, 995, 998, 1460
Tsp45I	GTSAC	2 cut(s)	220, 1069
TspDTI	ATGAA	1 cut(s)	965
TspGWI	ACGGA	1 cut(s)	48
TspRI	CASTG	5 cut(s)	711, 1009, 1111, 1182, 1429
VpaK11BI	GGWCC	2 cut(s)	456, 783
XapI	RAATTY	3 cut(s)	89, 813, 1052
XbaI	TCTAGA	2 cut(s)	94, 928
XmnI	GAANNNNTTC	2 cut(s)	90, 803
XspI	CTAG	5 cut(s)	95, 279, 659, 929, 1025
ZraI	GACGTC	1 cut(s)	51
Zsp2I	ATGCAT	1 cut(s)	550

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.