Inner membrane component of T3SS, cytoplasmic domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G38840 |
| fragaria_vesca | FvH4_6g46110 FvH4_6g46110 FvH4_6g46110 FvH4_6g46110 |
| malus_domestica | MD09G1076900.v1.1 |
| prunus_persica | Prupe.3G247200_v2.0.a1 |
| pyrus_communis | pycom09g00410 |
| rosa_chinensis | RchiOBHm_Chr2g0164301 RchiOBHm_Chr2g0164311 RchiOBHm_Chr2g0164441 RchiOBHm_Chr2g0164481 |
| rosa_laevigata | RLG00000021452 RLG00000021462 |
| rosa_multiflora | Rmu_sc0000144.1_g000022 Rmu_sc0002082.1_g000003 Rmu_sc0007154.1_g000011 Rmu_sc0020353.1_g000001 Rmu_sc0024157.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00086560 Rroxscaffold_2G00086640 |
| rosa_rugosa | Rorug02G0508000 Rorug02G0508500 Rorug02G0508700 |
| rosa_samantha | Rh2AG575900 Rh2AG576000 Rh2AG576700 Rh2BG587700 Rh2CG557600 Rh2CG557700 Rh2CG557800 Rh2CG558500 Rh2DG596400 Rh2DG598200 |
| rosa_wichuraiana | Rw2G047780 Rw2G047870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1607, 1892 |
| AccB1I | GGYRCC | 2 cut(s) | 347, 2167 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1598 |
| AccBSI | CCGCTC | 1 cut(s) | 303 |
| AccI | GTMKAC | 4 cut(s) | 357, 405, 1706, 1949 |
| AccII | CGCG | 2 cut(s) | 227, 861 |
| AclI | AACGTT | 1 cut(s) | 75 |
| AclWI | GGATC | 2 cut(s) | 283, 1460 |
| AcoI | YGGCCR | 1 cut(s) | 1215 |
| AcsI | RAATTY | 3 cut(s) | 1021, 1151, 1830 |
| AcuI | CTGAAG | 6 cut(s) | 78, 1707, 1818, 1941, 2055, 2196 |
| AcvI | CACGTG | 1 cut(s) | 1070 |
| AcyI | GRCGYC | 1 cut(s) | 348 |
| AfaI | GTAC | 6 cut(s) | 423, 508, 517, 671, 1624, 2115 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 125, 126, 302, 331, 1331, 1491, 1598, 2177 |
| AflIII | ACRYGT | 4 cut(s) | 390, 1069, 1353, 1574 |
| AjnI | CCWGG | 3 cut(s) | 534, 812, 1879 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1817, 1849 |
| Alw21I | GWGCWC | 6 cut(s) | 310, 339, 432, 462, 1069, 1791 |
| Alw26I | GTCTC | 6 cut(s) | 80, 239, 603, 1025, 1329, 2122 |
| Alw44I | GTGCAC | 1 cut(s) | 1065 |
| AlwI | GGATC | 2 cut(s) | 283, 1460 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1006 |
| Ama87I | CYCGRG | 2 cut(s) | 329, 2123 |
| AoxI | GGCC | 2 cut(s) | 128, 1215 |
| ApaLI | GTGCAC | 1 cut(s) | 1065 |
| ApeKI | GCWGC | 5 cut(s) | 1276, 1481, 1532, 1772, 1874 |
| ApoI | RAATTY | 3 cut(s) | 1021, 1151, 1830 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 75, 687, 1002 |
| AspLEI | GCGC | 2 cut(s) | 229, 350 |
| AspS9I | GGNCC | 5 cut(s) | 17, 128, 620, 1504, 2120 |
| AsuHPI | GGTGA | 5 cut(s) | 584, 812, 1487, 1676, 2201 |
| AvaI | CYCGRG | 2 cut(s) | 329, 2123 |
| AvaII | GGWCC | 4 cut(s) | 17, 620, 1504, 2120 |
| BaeGI | GKGCMC | 1 cut(s) | 1069 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 507, 540 |
| BanI | GGYRCC | 2 cut(s) | 347, 2167 |
| BanII | GRGCYC | 1 cut(s) | 310 |
| BauI | CACGAG | 2 cut(s) | 317, 1790 |
| BbrPI | CACGTG | 1 cut(s) | 1070 |
| BbsI | GAAGAC | 3 cut(s) | 1269, 1438, 2043 |
| Bbv12I | GWGCWC | 6 cut(s) | 310, 339, 432, 462, 1069, 1791 |
| BbvI | GCAGC | 5 cut(s) | 1263, 1493, 1519, 1784, 1861 |
| BccI | CCATC | 7 cut(s) | 118, 631, 737, 791, 1210, 1547, 2186 |
| BceAI | ACGGC | 4 cut(s) | 260, 361, 440, 1230 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 581, 615 |
| BciT130I | CCWGG | 3 cut(s) | 536, 814, 1881 |
| BcoDI | GTCTC | 6 cut(s) | 80, 239, 603, 1025, 1329, 2122 |
| BfaI | CTAG | 9 cut(s) | 68, 150, 183, 692, 1179, 1191, 1376, 1644, 1926 |
| BfmI | CTRYAG | 2 cut(s) | 1314, 1992 |
| BfoI | RGCGCY | 1 cut(s) | 351 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1726 |
| BglII | AGATCT | 1 cut(s) | 1417 |
| BmcAI | AGTACT | 2 cut(s) | 508, 2115 |
| Bme1390I | CCNGG | 3 cut(s) | 536, 814, 1881 |
| Bme18I | GGWCC | 4 cut(s) | 17, 620, 1504, 2120 |
| BmeT110I | CYCGRG | 2 cut(s) | 329, 2123 |
| BmgT120I | GGNCC | 5 cut(s) | 17, 128, 620, 1504, 2120 |
| BmiI | GGNNCC | 6 cut(s) | 18, 129, 349, 1969, 2122, 2169 |
| BmrFI | CCNGG | 3 cut(s) | 536, 814, 1881 |
| BmrI | ACTGGG | 1 cut(s) | 1717 |
| BmuI | ACTGGG | 1 cut(s) | 1717 |
| BpiI | GAAGAC | 3 cut(s) | 1269, 1438, 2043 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 292, 324 |
| BpmI | CTGGAG | 5 cut(s) | 446, 446, 1353, 1406, 1676 |
| BpuEI | CTTGAG | 3 cut(s) | 323, 924, 939 |
| BsaAI | YACGTR | 1 cut(s) | 1070 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1938 |
| BsaHI | GRCGYC | 1 cut(s) | 348 |
| BsaI | GGTCTC | 2 cut(s) | 239, 2122 |
| BsaJI | CCNNGG | 3 cut(s) | 12, 296, 499 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1683, 1713, 1725, 1755 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 125, 126, 302, 331, 1331, 1491, 1598, 2177 |
| Bse1I | ACTGG | 8 cut(s) | 361, 429, 463, 729, 1305, 1347, 1423, 1723 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1938 |
| BseBI | CCWGG | 3 cut(s) | 536, 814, 1881 |
| BseDI | CCNNGG | 3 cut(s) | 12, 296, 499 |
| BseGI | GGATG | 7 cut(s) | 203, 775, 799, 1351, 1958, 1993, 2201 |
| BseJI | GATNNNNATC | 1 cut(s) | 1938 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 125, 126, 302, 331, 1331, 1491, 1598, 2177 |
| BseMII | CTCAG | 3 cut(s) | 983, 1383, 1428 |
| BseNI | ACTGG | 8 cut(s) | 361, 429, 463, 729, 1305, 1347, 1423, 1723 |
| BseRI | GAGGAG | 6 cut(s) | 147, 150, 153, 156, 159, 1769 |
| BseSI | GKGCMC | 1 cut(s) | 1069 |
| BseX3I | CGGCCG | 1 cut(s) | 1215 |
| BseXI | GCAGC | 5 cut(s) | 1263, 1493, 1519, 1784, 1861 |
| BsgI | GTGCAG | 1 cut(s) | 1860 |
| Bsh1236I | CGCG | 2 cut(s) | 227, 861 |
| Bsh1285I | CGRYCG | 3 cut(s) | 9, 1218, 2215 |
| BshFI | GGCC | 2 cut(s) | 130, 1217 |
| BshNI | GGYRCC | 2 cut(s) | 347, 2167 |
| BsiEI | CGRYCG | 3 cut(s) | 9, 1218, 2215 |
| BsiHKAI | GWGCWC | 6 cut(s) | 310, 339, 432, 462, 1069, 1791 |
| BsiHKCI | CYCGRG | 2 cut(s) | 329, 2123 |
| BsiSI | CCGG | 1 cut(s) | 242 |
| BslFI | GGGAC | 1 cut(s) | 2106 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 125, 126, 302, 331, 1331, 1491, 1598, 2177 |
| BsmAI | GTCTC | 6 cut(s) | 80, 239, 603, 1025, 1329, 2122 |
| BsmBI | CGTCTC | 2 cut(s) | 603, 1329 |
| BsmFI | GGGAC | 1 cut(s) | 2106 |
| BsmI | GAATGC | 1 cut(s) | 592 |
| BsnI | GGCC | 2 cut(s) | 130, 1217 |
| Bso31I | GGTCTC | 2 cut(s) | 239, 2122 |
| BsoBI | CYCGRG | 2 cut(s) | 329, 2123 |
| Bsp1286I | GDGCHC | 6 cut(s) | 310, 339, 432, 462, 1069, 1791 |
| Bsp143I | GATC | 7 cut(s) | 288, 694, 972, 1159, 1417, 1465, 2212 |
| Bsp19I | CCATGG | 1 cut(s) | 12 |
| BspANI | GGCC | 2 cut(s) | 130, 1217 |
| BspCNI | CTCAG | 3 cut(s) | 982, 1384, 1427 |
| BspFNI | CGCG | 2 cut(s) | 227, 861 |
| BspHI | TCATGA | 1 cut(s) | 1912 |
| BspLI | GGNNCC | 6 cut(s) | 18, 129, 349, 1969, 2122, 2169 |
| BspPI | GGATC | 2 cut(s) | 283, 1460 |
| BspQI | GCTCTTC | 1 cut(s) | 1005 |
| BspT107I | GGYRCC | 2 cut(s) | 347, 2167 |
| BspTNI | GGTCTC | 2 cut(s) | 239, 2122 |
| BsrBI | CCGCTC | 1 cut(s) | 303 |
| BsrI | ACTGG | 8 cut(s) | 361, 429, 463, 729, 1305, 1347, 1423, 1723 |
| BssECI | CCNNGG | 3 cut(s) | 12, 296, 499 |
| BssMI | GATC | 7 cut(s) | 288, 694, 972, 1159, 1417, 1465, 2212 |
| BssNAI | GTATAC | 1 cut(s) | 1707 |
| BssNI | GRCGYC | 1 cut(s) | 348 |
| BssSI | CACGAG | 2 cut(s) | 317, 1790 |
| BssT1I | CCWWGG | 2 cut(s) | 12, 499 |
| Bst1107I | GTATAC | 1 cut(s) | 1707 |
| Bst2BI | CACGAG | 2 cut(s) | 317, 1790 |
| Bst2UI | CCWGG | 3 cut(s) | 536, 814, 1881 |
| Bst4CI | ACNGT | 4 cut(s) | 198, 1636, 1711, 1947 |
| Bst6I | CTCTTC | 3 cut(s) | 1005, 1023, 1230 |
| BstACI | GRCGYC | 1 cut(s) | 348 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1346, 1988 |
| BstBAI | YACGTR | 1 cut(s) | 1070 |
| BstC8I | GCNNGC | 1 cut(s) | 702 |
| BstDEI | CTNAG | 4 cut(s) | 969, 1371, 1392, 1414 |
| BstDSI | CCRYGG | 2 cut(s) | 12, 296 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2175 |
| BstF5I | GGATG | 7 cut(s) | 203, 775, 799, 1351, 1958, 1993, 2201 |
| BstFNI | CGCG | 2 cut(s) | 227, 861 |
| BstH2I | RGCGCY | 1 cut(s) | 351 |
| BstHHI | GCGC | 2 cut(s) | 229, 350 |
| BstKTI | GATC | 7 cut(s) | 291, 697, 975, 1162, 1420, 1468, 2215 |
| BstMAI | GTCTC | 6 cut(s) | 80, 239, 603, 1025, 1329, 2122 |
| BstMBI | GATC | 7 cut(s) | 288, 694, 972, 1159, 1417, 1465, 2212 |
| BstMCI | CGRYCG | 3 cut(s) | 9, 1218, 2215 |
| BstNI | CCWGG | 3 cut(s) | 536, 814, 1881 |
| BstNSI | RCATGY | 4 cut(s) | 394, 569, 1357, 1578 |
| BstSCI | CCNGG | 3 cut(s) | 534, 812, 1879 |
| BstSFI | CTRYAG | 2 cut(s) | 1314, 1992 |
| BstSLI | GKGCMC | 1 cut(s) | 1069 |
| BstUI | CGCG | 2 cut(s) | 227, 861 |
| BstV1I | GCAGC | 5 cut(s) | 1263, 1493, 1519, 1784, 1861 |
| BstV2I | GAAGAC | 3 cut(s) | 1269, 1438, 2043 |
| BstX2I | RGATCY | 1 cut(s) | 1417 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1730 |
| BstYI | RGATCY | 1 cut(s) | 1417 |
| BstZ17I | GTATAC | 1 cut(s) | 1707 |
| BstZI | CGGCCG | 1 cut(s) | 1215 |
| BsuRI | GGCC | 2 cut(s) | 130, 1217 |
| BtgI | CCRYGG | 2 cut(s) | 12, 296 |
| BtsCI | GGATG | 7 cut(s) | 203, 775, 799, 1351, 1958, 1993, 2201 |
| BtsIMutI | CAGTG | 3 cut(s) | 1034, 1340, 1730 |
| Cac8I | GCNNGC | 1 cut(s) | 702 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1006 |
| CciI | TCATGA | 1 cut(s) | 1912 |
| CfoI | GCGC | 2 cut(s) | 229, 350 |
| Cfr13I | GGNCC | 5 cut(s) | 17, 128, 620, 1504, 2120 |
| CseI | GACGC | 2 cut(s) | 1346, 2019 |
| CsiI | ACCWGGT | 2 cut(s) | 534, 1879 |
| Csp6I | GTAC | 6 cut(s) | 422, 507, 516, 670, 1623, 2114 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 457, 492 |
| CviQI | GTAC | 6 cut(s) | 422, 507, 516, 670, 1623, 2114 |
| DdeI | CTNAG | 4 cut(s) | 969, 1371, 1392, 1414 |
| DinI | GGCGCC | 1 cut(s) | 349 |
| DpnI | GATC | 7 cut(s) | 290, 696, 974, 1161, 1419, 1467, 2214 |
| DpnII | GATC | 7 cut(s) | 288, 694, 972, 1159, 1417, 1465, 2212 |
| EaeI | YGGCCR | 1 cut(s) | 1215 |
| EagI | CGGCCG | 1 cut(s) | 1215 |
| Eam1104I | CTCTTC | 3 cut(s) | 1005, 1023, 1230 |
| EarI | CTCTTC | 3 cut(s) | 1005, 1023, 1230 |
| EciI | GGCGGA | 2 cut(s) | 12, 123 |
| Ecl136II | GAGCTC | 1 cut(s) | 308 |
| EclXI | CGGCCG | 1 cut(s) | 1215 |
| Eco130I | CCWWGG | 2 cut(s) | 12, 499 |
| Eco24I | GRGCYC | 1 cut(s) | 310 |
| Eco31I | GGTCTC | 2 cut(s) | 239, 2122 |
| Eco47I | GGWCC | 4 cut(s) | 17, 620, 1504, 2120 |
| Eco52I | CGGCCG | 1 cut(s) | 1215 |
| Eco53kI | GAGCTC | 1 cut(s) | 308 |
| Eco57I | CTGAAG | 6 cut(s) | 78, 1707, 1818, 1941, 2055, 2196 |
| Eco72I | CACGTG | 1 cut(s) | 1070 |
| Eco88I | CYCGRG | 2 cut(s) | 329, 2123 |
| EcoICRI | GAGCTC | 1 cut(s) | 308 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2175 |
| EcoO109I | RGGNCCY | 3 cut(s) | 17, 128, 1504 |
| EcoRII | CCWGG | 3 cut(s) | 534, 812, 1879 |
| EcoT14I | CCWWGG | 2 cut(s) | 12, 499 |
| EcoT22I | ATGCAT | 1 cut(s) | 1351 |
| EcoT38I | GRGCYC | 1 cut(s) | 310 |
| EgeI | GGCGCC | 1 cut(s) | 349 |
| EheI | GGCGCC | 1 cut(s) | 349 |
| ErhI | CCWWGG | 2 cut(s) | 12, 499 |
| Esp3I | CGTCTC | 2 cut(s) | 603, 1329 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 720, 752, 819, 851, 1116, 1148, 1263, 1295 |
| FaqI | GGGAC | 1 cut(s) | 2106 |
| FauI | CCCGC | 1 cut(s) | 866 |
| FauNDI | CATATG | 1 cut(s) | 897 |
| FblI | GTMKAC | 4 cut(s) | 357, 405, 1706, 1949 |
| FokI | GGATG | 7 cut(s) | 190, 782, 806, 1358, 1945, 2000, 2188 |
| FriOI | GRGCYC | 1 cut(s) | 310 |
| FspBI | CTAG | 9 cut(s) | 68, 150, 183, 692, 1179, 1191, 1376, 1644, 1926 |
| GlaI | GCGC | 2 cut(s) | 228, 349 |
| GsuI | CTGGAG | 5 cut(s) | 446, 446, 1353, 1406, 1676 |
| HaeII | RGCGCY | 1 cut(s) | 351 |
| HaeIII | GGCC | 2 cut(s) | 130, 1217 |
| HapII | CCGG | 1 cut(s) | 242 |
| HgaI | GACGC | 2 cut(s) | 1346, 2019 |
| HhaI | GCGC | 2 cut(s) | 229, 350 |
| Hin1I | GRCGYC | 1 cut(s) | 348 |
| Hin6I | GCGC | 2 cut(s) | 227, 348 |
| HinP1I | GCGC | 2 cut(s) | 227, 348 |
| HincII | GTYRAC | 6 cut(s) | 201, 358, 406, 526, 1849, 1950 |
| HindII | GTYRAC | 6 cut(s) | 201, 358, 406, 526, 1849, 1950 |
| HindIII | AAGCTT | 1 cut(s) | 729 |
| HpaI | GTTAAC | 2 cut(s) | 526, 1849 |
| HpaII | CCGG | 1 cut(s) | 242 |
| HphI | GGTGA | 5 cut(s) | 584, 812, 1487, 1676, 2201 |
| HpyAV | CCTTC | 6 cut(s) | 260, 1185, 1517, 1682, 2142, 2171 |
| HpyCH4III | ACNGT | 4 cut(s) | 198, 1636, 1711, 1947 |
| HpyCH4IV | ACGT | 3 cut(s) | 75, 1069, 1552 |
| HpyCH4V | TGCA | 8 cut(s) | 565, 1067, 1244, 1349, 1402, 1640, 1682, 1877 |
| HpyF3I | CTNAG | 4 cut(s) | 969, 1371, 1392, 1414 |
| HpySE526I | ACGT | 3 cut(s) | 75, 1069, 1552 |
| Hsp92I | GRCGYC | 1 cut(s) | 348 |
| HspAI | GCGC | 2 cut(s) | 227, 348 |
| KasI | GGCGCC | 1 cut(s) | 347 |
| KspAI | GTTAAC | 2 cut(s) | 526, 1849 |
| Kzo9I | GATC | 7 cut(s) | 288, 694, 972, 1159, 1417, 1465, 2212 |
| LguI | GCTCTTC | 1 cut(s) | 1005 |
| LmnI | GCTCC | 8 cut(s) | 300, 305, 313, 383, 427, 465, 1733, 1967 |
| Lsp1109I | GCAGC | 5 cut(s) | 1263, 1493, 1519, 1784, 1861 |
| MabI | ACCWGGT | 2 cut(s) | 534, 1879 |
| MaeI | CTAG | 9 cut(s) | 68, 150, 183, 692, 1179, 1191, 1376, 1644, 1926 |
| MaeII | ACGT | 3 cut(s) | 75, 1069, 1552 |
| MaeIII | GTNAC | 2 cut(s) | 808, 1630 |
| MalI | GATC | 7 cut(s) | 290, 696, 974, 1161, 1419, 1467, 2214 |
| MbiI | CCGCTC | 1 cut(s) | 303 |
| MboI | GATC | 7 cut(s) | 288, 694, 972, 1159, 1417, 1465, 2212 |
| MfeI | CAATTG | 1 cut(s) | 1107 |
| MflI | RGATCY | 1 cut(s) | 1417 |
| MhlI | GDGCHC | 6 cut(s) | 310, 339, 432, 462, 1069, 1791 |
| MluCI | AATT | 4 cut(s) | 1021, 1107, 1151, 1830 |
| Mly113I | GGCGCC | 1 cut(s) | 348 |
| MlyI | GAGTC | 4 cut(s) | 50, 209, 946, 1667 |
| MmeI | TCCRAC | 1 cut(s) | 1493 |
| Mph1103I | ATGCAT | 1 cut(s) | 1351 |
| MroXI | GAANNNNTTC | 3 cut(s) | 75, 687, 1002 |
| MseI | TTAA | 3 cut(s) | 525, 1848, 2006 |
| MslI | CAYNNNNRTG | 1 cut(s) | 570 |
| MspI | CCGG | 1 cut(s) | 242 |
| MspR9I | CCNGG | 3 cut(s) | 536, 814, 1881 |
| MunI | CAATTG | 1 cut(s) | 1107 |
| Mva1269I | GAATGC | 1 cut(s) | 592 |
| MvaI | CCWGG | 3 cut(s) | 536, 814, 1881 |
| MvnI | CGCG | 2 cut(s) | 227, 861 |
| NarI | GGCGCC | 1 cut(s) | 348 |
| NcoI | CCATGG | 1 cut(s) | 12 |
| NdeI | CATATG | 1 cut(s) | 897 |
| NdeII | GATC | 7 cut(s) | 288, 694, 972, 1159, 1417, 1465, 2212 |
| NlaIV | GGNNCC | 6 cut(s) | 18, 129, 349, 1969, 2122, 2169 |
| NmuCI | GTSAC | 2 cut(s) | 808, 1630 |
| NsiI | ATGCAT | 1 cut(s) | 1351 |
| NspI | RCATGY | 4 cut(s) | 394, 569, 1357, 1578 |
| PaeR7I | CTCGAG | 1 cut(s) | 329 |
| PagI | TCATGA | 1 cut(s) | 1912 |
| PciI | ACATGT | 3 cut(s) | 390, 1353, 1574 |
| PciSI | GCTCTTC | 1 cut(s) | 1005 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 293, 411 |
| PctI | GAATGC | 1 cut(s) | 592 |
| PdmI | GAANNNNTTC | 3 cut(s) | 75, 687, 1002 |
| PfeI | GAWTC | 7 cut(s) | 98, 1003, 1496, 1856, 1916, 1934, 2150 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1598 |
| Ple19I | CGATCG | 1 cut(s) | 2215 |
| PleI | GAGTC | 4 cut(s) | 50, 209, 946, 1666 |
| PluTI | GGCGCC | 1 cut(s) | 351 |
| PmaCI | CACGTG | 1 cut(s) | 1070 |
| PmlI | CACGTG | 1 cut(s) | 1070 |
| PpsI | GAGTC | 4 cut(s) | 50, 209, 946, 1666 |
| Ppu21I | YACGTR | 1 cut(s) | 1070 |
| PpuMI | RGGWCCY | 2 cut(s) | 17, 1504 |
| PscI | ACATGT | 3 cut(s) | 390, 1353, 1574 |
| PsiI | TTATAA | 2 cut(s) | 1607, 1892 |
| Psp124BI | GAGCTC | 1 cut(s) | 310 |
| Psp1406I | AACGTT | 1 cut(s) | 75 |
| Psp5II | RGGWCCY | 2 cut(s) | 17, 1504 |
| Psp6I | CCWGG | 3 cut(s) | 534, 812, 1879 |
| PspCI | CACGTG | 1 cut(s) | 1070 |
| PspGI | CCWGG | 3 cut(s) | 534, 812, 1879 |
| PspN4I | GGNNCC | 6 cut(s) | 18, 129, 349, 1969, 2122, 2169 |
| PspPI | GGNCC | 5 cut(s) | 17, 128, 620, 1504, 2120 |
| PspPPI | RGGWCCY | 2 cut(s) | 17, 1504 |
| PspXI | VCTCGAGB | 1 cut(s) | 329 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1006 |
| PsuI | RGATCY | 1 cut(s) | 1417 |
| PvuI | CGATCG | 1 cut(s) | 2215 |
| RsaI | GTAC | 6 cut(s) | 423, 508, 517, 671, 1624, 2115 |
| RsaNI | GTAC | 6 cut(s) | 422, 507, 516, 670, 1623, 2114 |
| RseI | CAYNNNNRTG | 1 cut(s) | 570 |
| SacI | GAGCTC | 1 cut(s) | 310 |
| SalI | GTCGAC | 3 cut(s) | 356, 404, 1948 |
| SapI | GCTCTTC | 1 cut(s) | 1005 |
| SaqAI | TTAA | 3 cut(s) | 525, 1848, 2006 |
| Sau3AI | GATC | 7 cut(s) | 288, 694, 972, 1159, 1417, 1465, 2212 |
| Sau96I | GGNCC | 5 cut(s) | 17, 128, 620, 1504, 2120 |
| ScaI | AGTACT | 2 cut(s) | 508, 2115 |
| SchI | GAGTC | 4 cut(s) | 50, 209, 946, 1667 |
| ScrFI | CCNGG | 3 cut(s) | 536, 814, 1881 |
| SduI | GDGCHC | 6 cut(s) | 310, 339, 432, 462, 1069, 1791 |
| SexAI | ACCWGGT | 2 cut(s) | 534, 1879 |
| SfcI | CTRYAG | 2 cut(s) | 1314, 1992 |
| SfoI | GGCGCC | 1 cut(s) | 349 |
| Sfr274I | CTCGAG | 1 cut(s) | 329 |
| SinI | GGWCC | 4 cut(s) | 17, 620, 1504, 2120 |
| SlaI | CTCGAG | 1 cut(s) | 329 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 570 |
| SmlI | CTYRAG | 4 cut(s) | 329, 338, 939, 954 |
| SmoI | CTYRAG | 4 cut(s) | 329, 338, 939, 954 |
| Sse9I | AATT | 4 cut(s) | 1021, 1107, 1151, 1830 |
| SspDI | GGCGCC | 1 cut(s) | 347 |
| SspMI | CTAG | 9 cut(s) | 68, 150, 183, 692, 1179, 1191, 1376, 1644, 1926 |
| SstI | GAGCTC | 1 cut(s) | 310 |
| StyD4I | CCNGG | 3 cut(s) | 534, 812, 1879 |
| StyI | CCWWGG | 2 cut(s) | 12, 499 |
| TaaI | ACNGT | 4 cut(s) | 198, 1636, 1711, 1947 |
| TaiI | ACGT | 3 cut(s) | 78, 1072, 1555 |
| TaqI | TCGA | 7 cut(s) | 251, 287, 330, 357, 405, 1051, 1949 |
| TasI | AATT | 4 cut(s) | 1021, 1107, 1151, 1830 |
| TatI | WGTACW | 5 cut(s) | 421, 506, 669, 1622, 2113 |
| TauI | GCSGC | 8 cut(s) | 28, 31, 227, 232, 235, 238, 241, 1973 |
| TfiI | GAWTC | 7 cut(s) | 98, 1003, 1496, 1856, 1916, 1934, 2150 |
| Tru1I | TTAA | 3 cut(s) | 525, 1848, 2006 |
| Tru9I | TTAA | 3 cut(s) | 525, 1848, 2006 |
| TscAI | CASTG | 3 cut(s) | 1041, 1347, 1730 |
| TseFI | GTSAC | 2 cut(s) | 808, 1630 |
| TseI | GCWGC | 5 cut(s) | 1276, 1481, 1532, 1772, 1874 |
| Tsp45I | GTSAC | 2 cut(s) | 808, 1630 |
| TspGWI | ACGGA | 2 cut(s) | 285, 1915 |
| TspRI | CASTG | 3 cut(s) | 1041, 1347, 1730 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1598 |
| VneI | GTGCAC | 1 cut(s) | 1065 |
| VpaK11BI | GGWCC | 4 cut(s) | 17, 620, 1504, 2120 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2175 |
| XapI | RAATTY | 3 cut(s) | 1021, 1151, 1830 |
| XbaI | TCTAGA | 1 cut(s) | 691 |
| XceI | RCATGY | 4 cut(s) | 394, 569, 1357, 1578 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1722 |
| XhoI | CTCGAG | 1 cut(s) | 329 |
| XmiI | GTMKAC | 4 cut(s) | 357, 405, 1706, 1949 |
| XmnI | GAANNNNTTC | 3 cut(s) | 75, 687, 1002 |
| XspI | CTAG | 9 cut(s) | 68, 150, 183, 692, 1179, 1191, 1376, 1644, 1926 |
| ZrmI | AGTACT | 2 cut(s) | 508, 2115 |
| Zsp2I | ATGCAT | 1 cut(s) | 1351 |