Inner membrane component of T3SS, cytoplasmic domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G38840 |
| fragaria_vesca | FvH4_6g46110 FvH4_6g46110 FvH4_6g46110 FvH4_6g46110 |
| malus_domestica | MD09G1076900.v1.1 |
| prunus_persica | Prupe.3G247200_v2.0.a1 |
| pyrus_communis | pycom09g00410 |
| rosa_chinensis | RchiOBHm_Chr2g0164301 RchiOBHm_Chr2g0164311 RchiOBHm_Chr2g0164441 RchiOBHm_Chr2g0164481 |
| rosa_laevigata | RLG00000021452 RLG00000021462 |
| rosa_multiflora | Rmu_sc0000144.1_g000022 Rmu_sc0002082.1_g000003 Rmu_sc0007154.1_g000011 Rmu_sc0020353.1_g000001 Rmu_sc0024157.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00086560 Rroxscaffold_2G00086640 |
| rosa_rugosa | Rorug02G0508000 Rorug02G0508500 Rorug02G0508700 |
| rosa_samantha | Rh2AG575900 Rh2AG576000 Rh2AG576700 Rh2BG587700 Rh2CG557600 Rh2CG557700 Rh2CG557800 Rh2CG558500 Rh2DG596400 Rh2DG598200 |
| rosa_wichuraiana | Rw2G047780 Rw2G047870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1871 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1418 |
| AccB1I | GGYRCC | 2 cut(s) | 329, 2146 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1574 |
| AccBSI | CCGCTC | 1 cut(s) | 285 |
| AccI | GTMKAC | 3 cut(s) | 339, 387, 1682 |
| AccII | CGCG | 3 cut(s) | 218, 959, 961 |
| AclWI | GGATC | 1 cut(s) | 1436 |
| AcoI | YGGCCR | 1 cut(s) | 379 |
| AcsI | RAATTY | 2 cut(s) | 1003, 1127 |
| AcuI | CTGAAG | 4 cut(s) | 1683, 1797, 1920, 2175 |
| AcvI | CACGTG | 1 cut(s) | 1052 |
| AcyI | GRCGYC | 1 cut(s) | 330 |
| AfaI | GTAC | 6 cut(s) | 470, 490, 499, 653, 1600, 2094 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 116, 313, 1467, 1574, 2156 |
| AflIII | ACRYGT | 3 cut(s) | 372, 1051, 1329 |
| AjnI | CCWGG | 2 cut(s) | 516, 1858 |
| Alw21I | GWGCWC | 5 cut(s) | 292, 414, 444, 1051, 1770 |
| Alw26I | GTCTC | 5 cut(s) | 71, 221, 1007, 1305, 2101 |
| Alw44I | GTGCAC | 1 cut(s) | 1047 |
| AlwI | GGATC | 1 cut(s) | 1436 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 988, 1949 |
| Ama87I | CYCGRG | 2 cut(s) | 311, 2102 |
| AoxI | GGCC | 2 cut(s) | 118, 379 |
| ApaI | GGGCCC | 1 cut(s) | 122 |
| ApaLI | GTGCAC | 1 cut(s) | 1047 |
| ApeKI | GCWGC | 6 cut(s) | 1252, 1457, 1508, 1511, 1751, 1853 |
| ApoI | RAATTY | 2 cut(s) | 1003, 1127 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 984 |
| AspLEI | GCGC | 4 cut(s) | 220, 332, 961, 1858 |
| AspS9I | GGNCC | 6 cut(s) | 5, 118, 119, 316, 602, 2099 |
| AsuC2I | CCSGG | 1 cut(s) | 383 |
| AsuHPI | GGTGA | 5 cut(s) | 566, 794, 1463, 1652, 2180 |
| AvaI | CYCGRG | 2 cut(s) | 311, 2102 |
| AvaII | GGWCC | 4 cut(s) | 5, 316, 602, 2099 |
| BaeGI | GKGCMC | 2 cut(s) | 122, 1051 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 489, 522 |
| BanI | GGYRCC | 2 cut(s) | 329, 2146 |
| BanII | GRGCYC | 2 cut(s) | 122, 292 |
| BauI | CACGAG | 2 cut(s) | 1769, 1955 |
| BbrPI | CACGTG | 1 cut(s) | 1052 |
| BbsI | GAAGAC | 2 cut(s) | 1302, 1414 |
| Bbv12I | GWGCWC | 5 cut(s) | 292, 414, 444, 1051, 1770 |
| BbvI | GCAGC | 6 cut(s) | 1239, 1469, 1495, 1498, 1763, 1840 |
| BccI | CCATC | 7 cut(s) | 67, 109, 719, 773, 1523, 1723, 2165 |
| BceAI | ACGGC | 2 cut(s) | 242, 343 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 563, 597 |
| BciT130I | CCWGG | 2 cut(s) | 518, 1860 |
| BcnI | CCSGG | 1 cut(s) | 383 |
| BcoDI | GTCTC | 5 cut(s) | 71, 221, 1007, 1305, 2101 |
| BfaI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| BfmI | CTRYAG | 3 cut(s) | 1290, 1713, 1971 |
| BfoI | RGCGCY | 1 cut(s) | 333 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1702 |
| BglII | AGATCT | 1 cut(s) | 1393 |
| BisI | GCNGC | 8 cut(s) | 14, 221, 1253, 1458, 1509, 1512, 1752, 1854 |
| BlsI | GCNGC | 8 cut(s) | 15, 222, 1254, 1459, 1510, 1513, 1753, 1855 |
| BmcAI | AGTACT | 2 cut(s) | 490, 2094 |
| Bme1390I | CCNGG | 3 cut(s) | 383, 518, 1860 |
| Bme18I | GGWCC | 4 cut(s) | 5, 316, 602, 2099 |
| BmeT110I | CYCGRG | 2 cut(s) | 311, 2102 |
| BmgT120I | GGNCC | 6 cut(s) | 5, 118, 119, 316, 602, 2099 |
| BmiI | GGNNCC | 7 cut(s) | 6, 49, 120, 331, 431, 2101, 2148 |
| BmrFI | CCNGG | 3 cut(s) | 383, 518, 1860 |
| BmrI | ACTGGG | 1 cut(s) | 1693 |
| BmuI | ACTGGG | 1 cut(s) | 1693 |
| BpiI | GAAGAC | 2 cut(s) | 1302, 1414 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 68, 100, 274, 306, 1938, 1970 |
| BpmI | CTGGAG | 5 cut(s) | 428, 428, 1329, 1382, 1652 |
| BpuEI | CTTGAG | 3 cut(s) | 305, 906, 921 |
| BpuMI | CCSGG | 1 cut(s) | 383 |
| Bsa29I | ATCGAT | 1 cut(s) | 2194 |
| BsaAI | YACGTR | 1 cut(s) | 1052 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1917 |
| BsaHI | GRCGYC | 1 cut(s) | 330 |
| BsaI | GGTCTC | 3 cut(s) | 71, 221, 2101 |
| BsaJI | CCNNGG | 5 cut(s) | 201, 247, 481, 598, 771 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1701, 1731 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 116, 313, 1467, 1574, 2156 |
| Bse118I | RCCGGY | 1 cut(s) | 44 |
| Bse1I | ACTGG | 6 cut(s) | 301, 445, 1281, 1323, 1399, 1699 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1917 |
| BseBI | CCWGG | 2 cut(s) | 518, 1860 |
| BseCI | ATCGAT | 1 cut(s) | 2194 |
| BseDI | CCNNGG | 5 cut(s) | 201, 247, 481, 598, 771 |
| BseGI | GGATG | 7 cut(s) | 194, 757, 781, 1327, 1528, 1972, 2180 |
| BseJI | GATNNNNATC | 1 cut(s) | 1917 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 116, 313, 1467, 1574, 2156 |
| BseMII | CTCAG | 4 cut(s) | 600, 965, 1359, 1404 |
| BseNI | ACTGG | 6 cut(s) | 301, 445, 1281, 1323, 1399, 1699 |
| BseRI | GAGGAG | 4 cut(s) | 141, 144, 147, 150 |
| BseSI | GKGCMC | 2 cut(s) | 122, 1051 |
| BseX3I | CGGCCG | 1 cut(s) | 379 |
| BseXI | GCAGC | 6 cut(s) | 1239, 1469, 1495, 1498, 1763, 1840 |
| Bsh1236I | CGCG | 3 cut(s) | 218, 959, 961 |
| Bsh1285I | CGRYCG | 2 cut(s) | 382, 2194 |
| BshFI | GGCC | 2 cut(s) | 120, 381 |
| BshNI | GGYRCC | 2 cut(s) | 329, 2146 |
| BshVI | ATCGAT | 1 cut(s) | 2194 |
| BsiEI | CGRYCG | 2 cut(s) | 382, 2194 |
| BsiHKAI | GWGCWC | 5 cut(s) | 292, 414, 444, 1051, 1770 |
| BsiHKCI | CYCGRG | 2 cut(s) | 311, 2102 |
| BsiSI | CCGG | 3 cut(s) | 45, 224, 382 |
| BslFI | GGGAC | 2 cut(s) | 245, 2085 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 116, 313, 1467, 1574, 2156 |
| BsmAI | GTCTC | 5 cut(s) | 71, 221, 1007, 1305, 2101 |
| BsmBI | CGTCTC | 1 cut(s) | 1305 |
| BsmFI | GGGAC | 2 cut(s) | 245, 2085 |
| BsmI | GAATGC | 2 cut(s) | 574, 2039 |
| BsnI | GGCC | 2 cut(s) | 120, 381 |
| Bso31I | GGTCTC | 3 cut(s) | 71, 221, 2101 |
| BsoBI | CYCGRG | 2 cut(s) | 311, 2102 |
| Bsp120I | GGGCCC | 1 cut(s) | 118 |
| Bsp1286I | GDGCHC | 6 cut(s) | 122, 292, 414, 444, 1051, 1770 |
| Bsp143I | GATC | 6 cut(s) | 676, 954, 1135, 1393, 1441, 2191 |
| BspANI | GGCC | 2 cut(s) | 120, 381 |
| BspCNI | CTCAG | 4 cut(s) | 601, 964, 1360, 1403 |
| BspDI | ATCGAT | 1 cut(s) | 2194 |
| BspFNI | CGCG | 3 cut(s) | 218, 959, 961 |
| BspHI | TCATGA | 1 cut(s) | 1891 |
| BspLI | GGNNCC | 7 cut(s) | 6, 49, 120, 331, 431, 2101, 2148 |
| BspPI | GGATC | 1 cut(s) | 1436 |
| BspQI | GCTCTTC | 1 cut(s) | 987 |
| BspT107I | GGYRCC | 2 cut(s) | 329, 2146 |
| BspTNI | GGTCTC | 3 cut(s) | 71, 221, 2101 |
| BsrBI | CCGCTC | 1 cut(s) | 285 |
| BsrFI | RCCGGY | 1 cut(s) | 44 |
| BsrI | ACTGG | 6 cut(s) | 301, 445, 1281, 1323, 1399, 1699 |
| BssAI | RCCGGY | 1 cut(s) | 44 |
| BssECI | CCNNGG | 5 cut(s) | 201, 247, 481, 598, 771 |
| BssMI | GATC | 6 cut(s) | 676, 954, 1135, 1393, 1441, 2191 |
| BssNAI | GTATAC | 1 cut(s) | 1683 |
| BssNI | GRCGYC | 1 cut(s) | 330 |
| BssSI | CACGAG | 2 cut(s) | 1769, 1955 |
| BssT1I | CCWWGG | 3 cut(s) | 247, 481, 598 |
| Bst1107I | GTATAC | 1 cut(s) | 1683 |
| Bst2BI | CACGAG | 2 cut(s) | 1769, 1955 |
| Bst2UI | CCWGG | 2 cut(s) | 518, 1860 |
| Bst4CI | ACNGT | 4 cut(s) | 606, 1612, 1687, 1980 |
| Bst6I | CTCTTC | 3 cut(s) | 987, 1005, 1206 |
| BstACI | GRCGYC | 1 cut(s) | 330 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1322, 1967 |
| BstBAI | YACGTR | 1 cut(s) | 1052 |
| BstC8I | GCNNGC | 2 cut(s) | 46, 684 |
| BstDEI | CTNAG | 5 cut(s) | 609, 951, 1347, 1368, 1390 |
| BstDSI | CCRYGG | 1 cut(s) | 201 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2154 |
| BstF5I | GGATG | 7 cut(s) | 194, 757, 781, 1327, 1528, 1972, 2180 |
| BstFNI | CGCG | 3 cut(s) | 218, 959, 961 |
| BstH2I | RGCGCY | 1 cut(s) | 333 |
| BstHHI | GCGC | 4 cut(s) | 220, 332, 961, 1858 |
| BstKTI | GATC | 6 cut(s) | 679, 957, 1138, 1396, 1444, 2194 |
| BstMAI | GTCTC | 5 cut(s) | 71, 221, 1007, 1305, 2101 |
| BstMBI | GATC | 6 cut(s) | 676, 954, 1135, 1393, 1441, 2191 |
| BstMCI | CGRYCG | 2 cut(s) | 382, 2194 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 19, 41, 719, 905, 1313, 1322, 1702, 1967 |
| BstNI | CCWGG | 2 cut(s) | 518, 1860 |
| BstNSI | RCATGY | 3 cut(s) | 376, 551, 1333 |
| BstSCI | CCNGG | 3 cut(s) | 381, 516, 1858 |
| BstSFI | CTRYAG | 3 cut(s) | 1290, 1713, 1971 |
| BstSLI | GKGCMC | 2 cut(s) | 122, 1051 |
| BstUI | CGCG | 3 cut(s) | 218, 959, 961 |
| BstV1I | GCAGC | 6 cut(s) | 1239, 1469, 1495, 1498, 1763, 1840 |
| BstV2I | GAAGAC | 2 cut(s) | 1302, 1414 |
| BstX2I | RGATCY | 1 cut(s) | 1393 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1706 |
| BstYI | RGATCY | 1 cut(s) | 1393 |
| BstZ17I | GTATAC | 1 cut(s) | 1683 |
| BstZI | CGGCCG | 1 cut(s) | 379 |
| Bsu15I | ATCGAT | 1 cut(s) | 2194 |
| BsuRI | GGCC | 2 cut(s) | 120, 381 |
| BsuTUI | ATCGAT | 1 cut(s) | 2194 |
| BtgI | CCRYGG | 1 cut(s) | 201 |
| BtsCI | GGATG | 7 cut(s) | 194, 757, 781, 1327, 1528, 1972, 2180 |
| BtsI | GCAGTG | 1 cut(s) | 444 |
| BtsIMutI | CAGTG | 5 cut(s) | 444, 1016, 1316, 1706, 1976 |
| Cac8I | GCNNGC | 2 cut(s) | 46, 684 |
| CaiI | CAGNNNCTG | 2 cut(s) | 988, 1949 |
| CciI | TCATGA | 1 cut(s) | 1891 |
| CfoI | GCGC | 4 cut(s) | 220, 332, 961, 1858 |
| Cfr10I | RCCGGY | 1 cut(s) | 44 |
| Cfr13I | GGNCC | 6 cut(s) | 5, 118, 119, 316, 602, 2099 |
| ClaI | ATCGAT | 1 cut(s) | 2194 |
| CseI | GACGC | 1 cut(s) | 1322 |
| CsiI | ACCWGGT | 1 cut(s) | 516 |
| Csp6I | GTAC | 6 cut(s) | 469, 489, 498, 652, 1599, 2093 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 439, 474 |
| CviQI | GTAC | 6 cut(s) | 469, 489, 498, 652, 1599, 2093 |
| DdeI | CTNAG | 5 cut(s) | 609, 951, 1347, 1368, 1390 |
| DinI | GGCGCC | 1 cut(s) | 331 |
| DpnI | GATC | 6 cut(s) | 678, 956, 1137, 1395, 1443, 2193 |
| DpnII | GATC | 6 cut(s) | 676, 954, 1135, 1393, 1441, 2191 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1418 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1418 |
| EaeI | YGGCCR | 1 cut(s) | 379 |
| EagI | CGGCCG | 1 cut(s) | 379 |
| Eam1104I | CTCTTC | 3 cut(s) | 987, 1005, 1206 |
| EarI | CTCTTC | 3 cut(s) | 987, 1005, 1206 |
| EciI | GGCGGA | 2 cut(s) | 9, 1545 |
| Ecl136II | GAGCTC | 1 cut(s) | 290 |
| EclXI | CGGCCG | 1 cut(s) | 379 |
| Eco130I | CCWWGG | 3 cut(s) | 247, 481, 598 |
| Eco24I | GRGCYC | 2 cut(s) | 122, 292 |
| Eco31I | GGTCTC | 3 cut(s) | 71, 221, 2101 |
| Eco47I | GGWCC | 4 cut(s) | 5, 316, 602, 2099 |
| Eco52I | CGGCCG | 1 cut(s) | 379 |
| Eco53kI | GAGCTC | 1 cut(s) | 290 |
| Eco57I | CTGAAG | 4 cut(s) | 1683, 1797, 1920, 2175 |
| Eco72I | CACGTG | 1 cut(s) | 1052 |
| Eco88I | CYCGRG | 2 cut(s) | 311, 2102 |
| EcoICRI | GAGCTC | 1 cut(s) | 290 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2154 |
| EcoO109I | RGGNCCY | 3 cut(s) | 5, 119, 316 |
| EcoRII | CCWGG | 2 cut(s) | 516, 1858 |
| EcoT14I | CCWWGG | 3 cut(s) | 247, 481, 598 |
| EcoT22I | ATGCAT | 2 cut(s) | 1327, 2011 |
| EcoT38I | GRGCYC | 2 cut(s) | 122, 292 |
| EgeI | GGCGCC | 1 cut(s) | 331 |
| EheI | GGCGCC | 1 cut(s) | 331 |
| ErhI | CCWWGG | 3 cut(s) | 247, 481, 598 |
| Esp3I | CGTCTC | 1 cut(s) | 1305 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 702, 734, 801, 833, 1092, 1124, 1239, 1271 |
| FaqI | GGGAC | 2 cut(s) | 245, 2085 |
| FauI | CCCGC | 1 cut(s) | 49 |
| FauNDI | CATATG | 1 cut(s) | 879 |
| FblI | GTMKAC | 3 cut(s) | 339, 387, 1682 |
| Fnu4HI | GCNGC | 8 cut(s) | 14, 221, 1253, 1458, 1509, 1512, 1752, 1854 |
| FokI | GGATG | 7 cut(s) | 181, 764, 788, 1334, 1515, 1979, 2167 |
| FriOI | GRGCYC | 2 cut(s) | 122, 292 |
| Fsp4HI | GCNGC | 8 cut(s) | 14, 221, 1253, 1458, 1509, 1512, 1752, 1854 |
| FspBI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| GlaI | GCGC | 4 cut(s) | 219, 331, 960, 1857 |
| GluI | GCNGC | 8 cut(s) | 14, 221, 1253, 1458, 1509, 1512, 1752, 1854 |
| GsuI | CTGGAG | 5 cut(s) | 428, 428, 1329, 1382, 1652 |
| HaeII | RGCGCY | 1 cut(s) | 333 |
| HaeIII | GGCC | 2 cut(s) | 120, 381 |
| HapII | CCGG | 3 cut(s) | 45, 224, 382 |
| HgaI | GACGC | 1 cut(s) | 1322 |
| HhaI | GCGC | 4 cut(s) | 220, 332, 961, 1858 |
| Hin1I | GRCGYC | 1 cut(s) | 330 |
| Hin6I | GCGC | 4 cut(s) | 218, 330, 959, 1856 |
| HinP1I | GCGC | 4 cut(s) | 218, 330, 959, 1856 |
| HincII | GTYRAC | 4 cut(s) | 340, 388, 508, 1828 |
| HindII | GTYRAC | 4 cut(s) | 340, 388, 508, 1828 |
| HindIII | AAGCTT | 1 cut(s) | 711 |
| HpaI | GTTAAC | 2 cut(s) | 508, 1828 |
| HpaII | CCGG | 3 cut(s) | 45, 224, 382 |
| HphI | GGTGA | 5 cut(s) | 566, 794, 1463, 1652, 2180 |
| HpyAV | CCTTC | 4 cut(s) | 1161, 1658, 2121, 2150 |
| HpyCH4III | ACNGT | 4 cut(s) | 606, 1612, 1687, 1980 |
| HpyCH4IV | ACGT | 2 cut(s) | 1051, 2045 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 19, 41, 719, 905, 1313, 1322, 1702, 1967 |
| HpyF3I | CTNAG | 5 cut(s) | 609, 951, 1347, 1368, 1390 |
| HpySE526I | ACGT | 2 cut(s) | 1051, 2045 |
| Hsp92I | GRCGYC | 1 cut(s) | 330 |
| HspAI | GCGC | 4 cut(s) | 218, 330, 959, 1856 |
| KasI | GGCGCC | 1 cut(s) | 329 |
| KroI | GCCGGC | 1 cut(s) | 44 |
| KroNI | GCCGGC | 1 cut(s) | 46 |
| KspAI | GTTAAC | 2 cut(s) | 508, 1828 |
| Kzo9I | GATC | 6 cut(s) | 676, 954, 1135, 1393, 1441, 2191 |
| LguI | GCTCTTC | 1 cut(s) | 987 |
| LmnI | GCTCC | 9 cut(s) | 53, 282, 287, 295, 409, 447, 1085, 1709, 1946 |
| Lsp1109I | GCAGC | 6 cut(s) | 1239, 1469, 1495, 1498, 1763, 1840 |
| MabI | ACCWGGT | 1 cut(s) | 516 |
| MaeI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| MaeII | ACGT | 2 cut(s) | 1051, 2045 |
| MaeIII | GTNAC | 3 cut(s) | 790, 1606, 2046 |
| MalI | GATC | 6 cut(s) | 678, 956, 1137, 1395, 1443, 2193 |
| MbiI | CCGCTC | 1 cut(s) | 285 |
| MboI | GATC | 6 cut(s) | 676, 954, 1135, 1393, 1441, 2191 |
| MfeI | CAATTG | 4 cut(s) | 1089, 1182, 1260, 1373 |
| MflI | RGATCY | 1 cut(s) | 1393 |
| MhlI | GDGCHC | 6 cut(s) | 122, 292, 414, 444, 1051, 1770 |
| MluCI | AATT | 7 cut(s) | 344, 1003, 1089, 1127, 1182, 1260, 1373 |
| Mly113I | GGCGCC | 1 cut(s) | 330 |
| MlyI | GAGTC | 4 cut(s) | 200, 928, 1643, 1947 |
| MmeI | TCCRAC | 1 cut(s) | 1469 |
| Mph1103I | ATGCAT | 2 cut(s) | 1327, 2011 |
| MroNI | GCCGGC | 1 cut(s) | 44 |
| MroXI | GAANNNNTTC | 1 cut(s) | 984 |
| MseI | TTAA | 4 cut(s) | 507, 644, 1536, 1827 |
| MslI | CAYNNNNRTG | 1 cut(s) | 552 |
| MspA1I | CMGCKG | 1 cut(s) | 1193 |
| MspI | CCGG | 3 cut(s) | 45, 224, 382 |
| MspR9I | CCNGG | 3 cut(s) | 383, 518, 1860 |
| MunI | CAATTG | 4 cut(s) | 1089, 1182, 1260, 1373 |
| Mva1269I | GAATGC | 2 cut(s) | 574, 2039 |
| MvaI | CCWGG | 2 cut(s) | 518, 1860 |
| MvnI | CGCG | 3 cut(s) | 218, 959, 961 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 19, 41, 719, 905, 1313, 1322, 1702, 1967 |
| NaeI | GCCGGC | 1 cut(s) | 46 |
| NarI | GGCGCC | 1 cut(s) | 330 |
| NciI | CCSGG | 1 cut(s) | 383 |
| NdeI | CATATG | 1 cut(s) | 879 |
| NdeII | GATC | 6 cut(s) | 676, 954, 1135, 1393, 1441, 2191 |
| NgoMIV | GCCGGC | 1 cut(s) | 44 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 49, 120, 331, 431, 2101, 2148 |
| NmeAIII | GCCGAG | 1 cut(s) | 796 |
| NmuCI | GTSAC | 2 cut(s) | 1606, 2046 |
| NsiI | ATGCAT | 2 cut(s) | 1327, 2011 |
| NspI | RCATGY | 3 cut(s) | 376, 551, 1333 |
| PaeR7I | CTCGAG | 1 cut(s) | 311 |
| PagI | TCATGA | 1 cut(s) | 1891 |
| PciI | ACATGT | 2 cut(s) | 372, 1329 |
| PciSI | GCTCTTC | 1 cut(s) | 987 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 384, 393 |
| PctI | GAATGC | 2 cut(s) | 574, 2039 |
| PdiI | GCCGGC | 1 cut(s) | 46 |
| PdmI | GAANNNNTTC | 1 cut(s) | 984 |
| PfeI | GAWTC | 7 cut(s) | 271, 985, 1472, 1835, 1895, 1913, 2129 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1574 |
| PkrI | GCNGC | 8 cut(s) | 15, 222, 1254, 1459, 1510, 1513, 1753, 1855 |
| Ple19I | CGATCG | 1 cut(s) | 2194 |
| PleI | GAGTC | 4 cut(s) | 200, 928, 1642, 1947 |
| PluTI | GGCGCC | 1 cut(s) | 333 |
| PmaCI | CACGTG | 1 cut(s) | 1052 |
| PmlI | CACGTG | 1 cut(s) | 1052 |
| PpsI | GAGTC | 4 cut(s) | 200, 928, 1642, 1947 |
| Ppu21I | YACGTR | 1 cut(s) | 1052 |
| PpuMI | RGGWCCY | 2 cut(s) | 5, 316 |
| PscI | ACATGT | 2 cut(s) | 372, 1329 |
| PsiI | TTATAA | 1 cut(s) | 1871 |
| Psp124BI | GAGCTC | 1 cut(s) | 292 |
| Psp5II | RGGWCCY | 2 cut(s) | 5, 316 |
| Psp6I | CCWGG | 2 cut(s) | 516, 1858 |
| PspCI | CACGTG | 1 cut(s) | 1052 |
| PspGI | CCWGG | 2 cut(s) | 516, 1858 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 49, 120, 331, 431, 2101, 2148 |
| PspOMI | GGGCCC | 1 cut(s) | 118 |
| PspPI | GGNCC | 6 cut(s) | 5, 118, 119, 316, 602, 2099 |
| PspPPI | RGGWCCY | 2 cut(s) | 5, 316 |
| PspXI | VCTCGAGB | 1 cut(s) | 311 |
| PstNI | CAGNNNCTG | 2 cut(s) | 988, 1949 |
| PsuI | RGATCY | 1 cut(s) | 1393 |
| PvuI | CGATCG | 1 cut(s) | 2194 |
| RsaI | GTAC | 6 cut(s) | 470, 490, 499, 653, 1600, 2094 |
| RsaNI | GTAC | 6 cut(s) | 469, 489, 498, 652, 1599, 2093 |
| RseI | CAYNNNNRTG | 1 cut(s) | 552 |
| SacI | GAGCTC | 1 cut(s) | 292 |
| SalI | GTCGAC | 2 cut(s) | 338, 386 |
| SapI | GCTCTTC | 1 cut(s) | 987 |
| SaqAI | TTAA | 4 cut(s) | 507, 644, 1536, 1827 |
| SatI | GCNGC | 8 cut(s) | 14, 221, 1253, 1458, 1509, 1512, 1752, 1854 |
| Sau3AI | GATC | 6 cut(s) | 676, 954, 1135, 1393, 1441, 2191 |
| Sau96I | GGNCC | 6 cut(s) | 5, 118, 119, 316, 602, 2099 |
| ScaI | AGTACT | 2 cut(s) | 490, 2094 |
| SchI | GAGTC | 4 cut(s) | 200, 928, 1643, 1947 |
| ScrFI | CCNGG | 3 cut(s) | 383, 518, 1860 |
| SduI | GDGCHC | 6 cut(s) | 122, 292, 414, 444, 1051, 1770 |
| SexAI | ACCWGGT | 1 cut(s) | 516 |
| SfcI | CTRYAG | 3 cut(s) | 1290, 1713, 1971 |
| SfoI | GGCGCC | 1 cut(s) | 331 |
| Sfr274I | CTCGAG | 1 cut(s) | 311 |
| SinI | GGWCC | 4 cut(s) | 5, 316, 602, 2099 |
| SlaI | CTCGAG | 1 cut(s) | 311 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 552 |
| SmlI | CTYRAG | 4 cut(s) | 311, 320, 921, 936 |
| SmoI | CTYRAG | 4 cut(s) | 311, 320, 921, 936 |
| Sse9I | AATT | 7 cut(s) | 344, 1003, 1089, 1127, 1182, 1260, 1373 |
| SspDI | GGCGCC | 1 cut(s) | 329 |
| SspMI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| SstI | GAGCTC | 1 cut(s) | 292 |
| StyD4I | CCNGG | 3 cut(s) | 381, 516, 1858 |
| StyI | CCWWGG | 3 cut(s) | 247, 481, 598 |
| TaaI | ACNGT | 4 cut(s) | 606, 1612, 1687, 1980 |
| TaiI | ACGT | 2 cut(s) | 1054, 2048 |
| TaqI | TCGA | 7 cut(s) | 269, 312, 339, 387, 1033, 1928, 2194 |
| TasI | AATT | 7 cut(s) | 344, 1003, 1089, 1127, 1182, 1260, 1373 |
| TatI | WGTACW | 4 cut(s) | 488, 651, 1598, 2092 |
| TauI | GCSGC | 2 cut(s) | 16, 223 |
| TfiI | GAWTC | 7 cut(s) | 271, 985, 1472, 1835, 1895, 1913, 2129 |
| Tru1I | TTAA | 4 cut(s) | 507, 644, 1536, 1827 |
| Tru9I | TTAA | 4 cut(s) | 507, 644, 1536, 1827 |
| TscAI | CASTG | 5 cut(s) | 444, 1023, 1323, 1706, 1983 |
| TseFI | GTSAC | 2 cut(s) | 1606, 2046 |
| TseI | GCWGC | 6 cut(s) | 1252, 1457, 1508, 1511, 1751, 1853 |
| Tsp45I | GTSAC | 2 cut(s) | 1606, 2046 |
| TspGWI | ACGGA | 3 cut(s) | 218, 836, 1415 |
| TspRI | CASTG | 5 cut(s) | 444, 1023, 1323, 1706, 1983 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1574 |
| VneI | GTGCAC | 1 cut(s) | 1047 |
| VpaK11BI | GGWCC | 4 cut(s) | 5, 316, 602, 2099 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2154 |
| XapI | RAATTY | 2 cut(s) | 1003, 1127 |
| XceI | RCATGY | 3 cut(s) | 376, 551, 1333 |
| XhoI | CTCGAG | 1 cut(s) | 311 |
| XmiI | GTMKAC | 3 cut(s) | 339, 387, 1682 |
| XmnI | GAANNNNTTC | 1 cut(s) | 984 |
| XspI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| ZrmI | AGTACT | 2 cut(s) | 490, 2094 |
| Zsp2I | ATGCAT | 2 cut(s) | 1327, 2011 |