Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0003377

Physical Location & Seq

Genomic Coordinates Forward (+)

23801283 .. 23809298

Gene Structure 8016 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G247200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGGAAACATACGTGAACGATTGTCAACCGATAATCACAATGACGACCGCCATGGCTCCTCCACCAGACCTCGTCCCCGAAACCCTAAGCAGCGAACTGGCCGAAACATCTTCGTCTGCAATTACGATGAAGCCCCCAATGGGTCCTCCACCTGCCAAAAACCCTAGCCCTCCGCCACAATCTGAAGCTCCTATCTCCGAAGACCAACCCCAATCCAATTCATCCATTAACGATTCAACAGAAGCAGCCGAGGACAATGCCAAGCAGACCTTGAAGCCCCAATCTCAAGGCTTTGCCGTTCCCTACACGATCCCTCCCTGGAGTGCAGCTCCGTGTCACCAGTTCCAACTCGAGGTCCTCAAGGACGGCGCTATCATCAACCAATTTGATGTATATGAGAAAGGAGCTTACATGTTTGGCCGTATAGACCTCTGCGACTTTGTCCTGGAGCATCCAACCGTTTCTAGATTCCATGCTGTCCTCCAGTTCAAGAGAAGTGGGGAGGCATATCTTTATGATCTCGGCAGTACTCATGGTACTTTCATCAACAAGAATCAGGTGAACAAAAAGGTTTACGTGGATTTATGTGTTGGTGATGTCATCCGTTTTGGGCATTCATCTCGTCTGTACATTTTCCAAGGACCATCTGAGTTGATGCCACCGGAAAAAGACTTGAAGCTTTTAAGAGTGGCCAAAATGCGTGAGGATATCCTAGATCAGGAAGCATCACTTCAACGAGCAAGACTGGAGGCTTCTCTTGCTGATGGCATCTCATGGGGCATGGAAGAGGATGCTATTGAAGAAGCTGAGGATGATGGTGAAGAAGTAACTTGGCAAACGTACAAAGGACAGCTAACAGAAAAACAGGAAAAGACGCGTGAAAAAATTGCTCACATGAAGAAAGAGATAGATGCTATTCGTGCTAAAGACATCTCTCAAGGTGGTTTGAGTCAAGGACAACAAACTCAAATTGCTCGAAATGAACAGAGAATAGCACAGATTATGGAAGAACTTGAAAATTTGGAAGAGACACTAAATGAGAGTATACGAGAAAGTTTGGGTGCACGTGTTGGGAAGCTATCTTATGGTAAGAAGAAAGGAGCAACTGACGAAGAAGAAGAACTTTTGAGCGATGATGATGAATTCTATGACAGAACAAAGAAGCCTTCCAGTAAAAAGGCGGGTGAAAACCCATCTGTTGAAACCTCTGATACTCTTCTTGACAAGAGAGATGCTATCATGAAAGAAATGGAAGAAAAGAAAGAATTGCTTTCAATTGAGAAAAACAAAATGGCATCAAAAACTACAGACGAAACTGATGCTGCAGATGCACTGGACGCATACATGTCAGGGCTTTCATCTCAGCTTGTGCTTAATAAAACTGAGGAACTCCAAAAGGAACTATCAGCTCTTCAGTCTGAATTGGACAGGATAATCTTTCTTTTGAAGATTGCTGACCCATCTGGAGAAGCTGCGAAGAAAAGGGATTCAAAAGTGGAAGAGGTGCAAGAGTCAAAACCTAACAAATCTGAAACTCCTGCTCCTGCCATAAAAAAGCAACCTCCAATGGAACCAGAGGAAAGCAGCCAACCTGGAAAACCAGCAAATGACTCTATACTGAAAGAGGGAACTACAGAGGTTAGCATTAAATCGAGCACGGAGCTGGCAGCTAGCGAGATTGTAACTGATGCAACAGAAGGAAAAAACGTTGTGTATACTGTTGTAAAGCCACAGTGGCTTGGGGCTGTTGAGGACATAAAAATGGAGAAGGGTCATCAAGAGGCAGCACCTTCAAATCAGGACGAGGCTGGTGAATTCGTTGACTACAAAGACAGGAAGAAAATTTTGGAGAATGTCAGTGATGCTAAAGTTAACATGGAATCTGGGATTGAAAATGCTGCTCCTGGTTTGATTATACGGAAGCGGAAACAAGTTCATGAGTCTAAAGGTAATGATAGTGATTCTCGTCAACAGCCGGCATCCTCCACGGGAGCTGAATTCTTGGCAGAGGATGCTGTGGCACTGTTGTTAAAACATAAAAGAGGCTATTATGCACCAGATGATGAGACCCAAGATGTTAAAGAAGGGAAACAATTGAGCAAGGATAAGAAGAAGCCTAAACGAGTTCTCGGTCCCGAGAAACCTTCATTTCTTGATACTAATTCTGATGAAACATGGGTGCCTCCTGAAGGACAATCCGGCGATGGACGAACTTCCTTGAACAGTCACTATGGCTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA

Protein Analysis

747

Amino Acids

82.65

Weight (kDa)

4.85

Isoelectric Point (pI)

52.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38840
fragaria_vesca	FvH4_6g46110 FvH4_6g46110 FvH4_6g46110 FvH4_6g46110
malus_domestica	MD09G1076900.v1.1
prunus_persica	Prupe.3G247200_v2.0.a1
pyrus_communis	pycom09g00410
rosa_chinensis	RchiOBHm_Chr2g0164301 RchiOBHm_Chr2g0164311 RchiOBHm_Chr2g0164441 RchiOBHm_Chr2g0164481
rosa_laevigata	RLG00000021452 RLG00000021462
rosa_multiflora	Rmu_sc0000144.1_g000022 Rmu_sc0002082.1_g000003 Rmu_sc0007154.1_g000011 Rmu_sc0020353.1_g000001 Rmu_sc0024157.1_g000001
rosa_roxburghii	Rroxscaffold_2G00086560 Rroxscaffold_2G00086640
rosa_rugosa	Rorug02G0508000 Rorug02G0508500 Rorug02G0508700
rosa_samantha	Rh2AG575900 Rh2AG576000 Rh2AG576700 Rh2BG587700 Rh2CG557600 Rh2CG557700 Rh2CG557800 Rh2CG558500 Rh2DG596400 Rh2DG598200
rosa_wichuraiana	Rw2G047780 Rw2G047870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	160
Acc36I	ACCTGC	1 cut(s)	160
AccB1I	GGYRCC	1 cut(s)	2179
AccI	GTMKAC	2 cut(s)	1045, 1715
AccII	CGCG	1 cut(s)	877
AciI	CCGC	4 cut(s)	48, 173, 1181, 1924
AclI	AACGTT	1 cut(s)	1707
AclWI	GGATC	1 cut(s)	304
AcoI	YGGCCR	3 cut(s)	99, 418, 690
AcsI	RAATTY	5 cut(s)	1018, 1142, 1814, 1842, 1997
AcuI	CTGAAG	3 cut(s)	204, 1397, 2208
AcvI	CACGTG	1 cut(s)	1067
AfaI	GTAC	4 cut(s)	529, 538, 629, 842
AfiI	CCNNNNNNNGG	4 cut(s)	140, 352, 718, 2189
AflIII	ACRYGT	4 cut(s)	411, 875, 1066, 1344
AjnI	CCWGG	4 cut(s)	317, 444, 1591, 1903
AjuI	GAANNNNNNNTTGG	2 cut(s)	1829, 1861
Alw21I	GWGCWC	2 cut(s)	1066, 1658
Alw26I	GTCTC	2 cut(s)	1022, 2060
Alw44I	GTGCAC	1 cut(s)	1062
AlwI	GGATC	1 cut(s)	304
Ama87I	CYCGRG	2 cut(s)	350, 2135
AoxI	GGCC	3 cut(s)	99, 418, 690
ApaLI	GTGCAC	1 cut(s)	1062
ApeKI	GCWGC	9 cut(s)	90, 245, 326, 1322, 1472, 1584, 1667, 1784, 1898
ApoI	RAATTY	5 cut(s)	1018, 1142, 1814, 1842, 1997
AspLEI	GCGC	1 cut(s)	371
AspS9I	GGNCC	4 cut(s)	143, 355, 641, 2132
AsuHPI	GGTGA	6 cut(s)	329, 571, 605, 830, 1196, 1823
AsuNHI	GCTAGC	1 cut(s)	1670
AvaI	CYCGRG	2 cut(s)	350, 2135
AvaII	GGWCC	4 cut(s)	143, 355, 641, 2132
BaeGI	GKGCMC	1 cut(s)	1066
BalI	TGGCCA	1 cut(s)	692
BanI	GGYRCC	1 cut(s)	2179
BbrPI	CACGTG	1 cut(s)	1067
BbsI	GAAGAC	1 cut(s)	207
Bbv12I	GWGCWC	2 cut(s)	1066, 1658
BbvCI	CCTCAGC	1 cut(s)	807
BbvI	GCAGC	9 cut(s)	102, 257, 338, 1309, 1459, 1596, 1679, 1796, 1885
BccI	CCATC	6 cut(s)	652, 758, 809, 1201, 1468, 2198
BceAI	ACGGC	3 cut(s)	281, 382, 405
BcgI	CGANNNNNNTGC	6 cut(s)	239, 273, 602, 636, 1301, 1335
BciT130I	CCWGG	4 cut(s)	319, 446, 1593, 1905
BcoDI	GTCTC	2 cut(s)	1022, 2060
BfaI	CTAG	5 cut(s)	165, 465, 713, 1671, 2239
BfmI	CTRYAG	3 cut(s)	1305, 1323, 1632
BfoI	RGCGCY	1 cut(s)	372
BfuAI	ACCTGC	1 cut(s)	160
BglI	GCCNNNNNGGC	1 cut(s)	1735
BisI	GCNGC	9 cut(s)	91, 246, 327, 1323, 1473, 1585, 1668, 1785, 1899
BlsI	GCNGC	9 cut(s)	92, 247, 328, 1324, 1474, 1586, 1669, 1786, 1900
BmcAI	AGTACT	1 cut(s)	529
Bme1390I	CCNGG	4 cut(s)	319, 446, 1593, 1905
Bme18I	GGWCC	4 cut(s)	143, 355, 641, 2132
BmeT110I	CYCGRG	2 cut(s)	350, 2135
BmgT120I	GGNCC	4 cut(s)	143, 355, 641, 2132
BmiI	GGNNCC	5 cut(s)	57, 144, 1572, 2134, 2181
BmrFI	CCNGG	4 cut(s)	319, 446, 1593, 1905
BmtI	GCTAGC	1 cut(s)	1674
BpiI	GAAGAC	1 cut(s)	207
BplI	GAGNNNNNCTC	2 cut(s)	313, 345
BpmI	CTGGAG	5 cut(s)	340, 467, 467, 767, 1485
Bpu10I	CCTNAGC	2 cut(s)	86, 807
BpuEI	CTTGAG	3 cut(s)	270, 344, 921
BsaAI	YACGTR	3 cut(s)	13, 577, 1067
BsaI	GGTCTC	1 cut(s)	2060
BsaJI	CCNNGG	5 cut(s)	51, 249, 317, 637, 1986
BsaWI	WCCGGW	1 cut(s)	661
BsaXI	ACNNNNNCTCC	4 cut(s)	298, 328, 1525, 1555
Bsc4I	CCNNNNNNNGG	4 cut(s)	140, 352, 718, 2189
Bse118I	RCCGGY	1 cut(s)	1975
Bse1I	ACTGG	6 cut(s)	102, 340, 484, 750, 1170, 1338
BseBI	CCWGG	4 cut(s)	319, 446, 1593, 1905
BseDI	CCNNGG	5 cut(s)	51, 249, 317, 637, 1986
BseGI	GGATG	7 cut(s)	221, 451, 600, 796, 817, 1979, 2017
BseLI	CCNNNNNNNGG	4 cut(s)	140, 352, 718, 2189
BseMII	CTCAG	4 cut(s)	639, 798, 1374, 1376
BseNI	ACTGG	6 cut(s)	102, 340, 484, 750, 1170, 1338
BseRI	GAGGAG	1 cut(s)	48
BseSI	GKGCMC	1 cut(s)	1066
BseXI	GCAGC	9 cut(s)	102, 257, 338, 1309, 1459, 1596, 1679, 1796, 1885
BsgI	GTGCAG	1 cut(s)	345
Bsh1236I	CGCG	1 cut(s)	877
Bsh1285I	CGRYCG	1 cut(s)	48
BshFI	GGCC	3 cut(s)	101, 420, 692
BshNI	GGYRCC	1 cut(s)	2179
BsiEI	CGRYCG	1 cut(s)	48
BsiHKAI	GWGCWC	2 cut(s)	1066, 1658
BsiHKCI	CYCGRG	2 cut(s)	350, 2135
BsiSI	CCGG	3 cut(s)	662, 1976, 2199
BslFI	GGGAC	2 cut(s)	59, 2118
BslI	CCNNNNNNNGG	4 cut(s)	140, 352, 718, 2189
BsmAI	GTCTC	2 cut(s)	1022, 2060
BsmFI	GGGAC	2 cut(s)	59, 2118
BsmI	GAATGC	1 cut(s)	613
BsnI	GGCC	3 cut(s)	101, 420, 692
Bso31I	GGTCTC	1 cut(s)	2060
BsoBI	CYCGRG	2 cut(s)	350, 2135
Bsp1286I	GDGCHC	2 cut(s)	1066, 1658
Bsp1407I	TGTACA	1 cut(s)	627
Bsp143I	GATC	3 cut(s)	309, 517, 715
Bsp19I	CCATGG	1 cut(s)	51
BspACI	CCGC	4 cut(s)	48, 173, 1181, 1924
BspANI	GGCC	3 cut(s)	101, 420, 692
BspCNI	CTCAG	4 cut(s)	640, 799, 1375, 1375
BspFNI	CGCG	1 cut(s)	877
BspHI	TCATGA	2 cut(s)	1239, 1936
BspLI	GGNNCC	5 cut(s)	57, 144, 1572, 2134, 2181
BspMAI	CTGCAG	1 cut(s)	1327
BspMI	ACCTGC	1 cut(s)	160
BspOI	GCTAGC	1 cut(s)	1674
BspPI	GGATC	1 cut(s)	304
BspQI	GCTCTTC	1 cut(s)	1416
BspT107I	GGYRCC	1 cut(s)	2179
BspTNI	GGTCTC	1 cut(s)	2060
BsrFI	RCCGGY	1 cut(s)	1975
BsrGI	TGTACA	1 cut(s)	627
BsrI	ACTGG	6 cut(s)	102, 340, 484, 750, 1170, 1338
BssAI	RCCGGY	1 cut(s)	1975
BssECI	CCNNGG	5 cut(s)	51, 249, 317, 637, 1986
BssMI	GATC	3 cut(s)	309, 517, 715
BssNAI	GTATAC	2 cut(s)	1046, 1716
BssT1I	CCWWGG	2 cut(s)	51, 637
Bst1107I	GTATAC	2 cut(s)	1046, 1716
Bst2UI	CCWGG	4 cut(s)	319, 446, 1593, 1905
Bst4CI	ACNGT	5 cut(s)	460, 1720, 1734, 2025, 2225
Bst6I	CTCTTC	5 cut(s)	780, 1020, 1221, 1416, 1494
BstAPI	GCANNNNNTGC	1 cut(s)	2012
BstAUI	TGTACA	1 cut(s)	627
BstBAI	YACGTR	3 cut(s)	13, 577, 1067
BstC8I	GCNNGC	3 cut(s)	1665, 1672, 1977
BstDEI	CTNAG	5 cut(s)	86, 648, 807, 1362, 1383
BstDSI	CCRYGG	2 cut(s)	51, 1986
BstENI	CCTNNNNNAGG	2 cut(s)	716, 2187
BstF5I	GGATG	7 cut(s)	221, 451, 600, 796, 817, 1979, 2017
BstFNI	CGCG	1 cut(s)	877
BstH2I	RGCGCY	1 cut(s)	372
BstHHI	GCGC	1 cut(s)	371
BstKTI	GATC	3 cut(s)	312, 520, 718
BstMAI	GTCTC	2 cut(s)	1022, 2060
BstMBI	GATC	3 cut(s)	309, 517, 715
BstMCI	CGRYCG	1 cut(s)	48
BstMWI	GCNNNNNNNGC	6 cut(s)	758, 920, 1328, 1337, 1735, 2012
BstNI	CCWGG	4 cut(s)	319, 446, 1593, 1905
BstNSI	RCATGY	2 cut(s)	415, 1348
BstSCI	CCNGG	4 cut(s)	317, 444, 1591, 1903
BstSFI	CTRYAG	3 cut(s)	1305, 1323, 1632
BstSLI	GKGCMC	1 cut(s)	1066
BstUI	CGCG	1 cut(s)	877
BstV1I	GCAGC	9 cut(s)	102, 257, 338, 1309, 1459, 1596, 1679, 1796, 1885
BstV2I	GAAGAC	1 cut(s)	207
BstZ17I	GTATAC	2 cut(s)	1046, 1716
BsuRI	GGCC	3 cut(s)	101, 420, 692
BtgI	CCRYGG	2 cut(s)	51, 1986
BtgZI	GCGATG	2 cut(s)	1146, 2217
BtsCI	GGATG	7 cut(s)	221, 451, 600, 796, 817, 1979, 2017
BtsIMutI	CAGTG	4 cut(s)	1331, 1739, 1864, 2021
BveI	ACCTGC	1 cut(s)	160
Cac8I	GCNNGC	3 cut(s)	1665, 1672, 1977
CciI	TCATGA	2 cut(s)	1239, 1936
CfoI	GCGC	1 cut(s)	371
Cfr10I	RCCGGY	1 cut(s)	1975
Cfr13I	GGNCC	4 cut(s)	143, 355, 641, 2132
CseI	GACGC	2 cut(s)	883, 1346
Csp6I	GTAC	4 cut(s)	528, 537, 628, 841
CspCI	CAANNNNNGTGG	2 cut(s)	478, 513
CviQI	GTAC	4 cut(s)	528, 537, 628, 841
DdeI	CTNAG	5 cut(s)	86, 648, 807, 1362, 1383
DpnI	GATC	3 cut(s)	311, 519, 717
DpnII	GATC	3 cut(s)	309, 517, 715
EaeI	YGGCCR	3 cut(s)	99, 418, 690
Eam1104I	CTCTTC	5 cut(s)	780, 1020, 1221, 1416, 1494
EarI	CTCTTC	5 cut(s)	780, 1020, 1221, 1416, 1494
EciI	GGCGGA	1 cut(s)	162
Eco130I	CCWWGG	2 cut(s)	51, 637
Eco31I	GGTCTC	1 cut(s)	2060
Eco32I	GATATC	1 cut(s)	709
Eco47I	GGWCC	4 cut(s)	143, 355, 641, 2132
Eco57I	CTGAAG	3 cut(s)	204, 1397, 2208
Eco72I	CACGTG	1 cut(s)	1067
Eco88I	CYCGRG	2 cut(s)	350, 2135
EcoNI	CCTNNNNNAGG	2 cut(s)	716, 2187
EcoO109I	RGGNCCY	2 cut(s)	143, 355
EcoRI	GAATTC	3 cut(s)	1142, 1814, 1997
EcoRII	CCWGG	4 cut(s)	317, 444, 1591, 1903
EcoRV	GATATC	1 cut(s)	709
EcoT14I	CCWWGG	2 cut(s)	51, 637
ErhI	CCWWGG	2 cut(s)	51, 637
FalI	AAGNNNNNCTT	8 cut(s)	254, 286, 714, 746, 1107, 1139, 1254, 1286
FaqI	GGGAC	2 cut(s)	59, 2118
FauI	CCCGC	1 cut(s)	1174
FblI	GTMKAC	2 cut(s)	1045, 1715
Fnu4HI	GCNGC	9 cut(s)	91, 246, 327, 1323, 1473, 1585, 1668, 1785, 1899
FokI	GGATG	7 cut(s)	208, 438, 587, 803, 824, 1966, 2024
Fsp4HI	GCNGC	9 cut(s)	91, 246, 327, 1323, 1473, 1585, 1668, 1785, 1899
FspBI	CTAG	5 cut(s)	165, 465, 713, 1671, 2239
GlaI	GCGC	1 cut(s)	370
GluI	GCNGC	9 cut(s)	91, 246, 327, 1323, 1473, 1585, 1668, 1785, 1899
GsuI	CTGGAG	5 cut(s)	340, 467, 467, 767, 1485
HaeII	RGCGCY	1 cut(s)	372
HaeIII	GGCC	3 cut(s)	101, 420, 692
HapII	CCGG	3 cut(s)	662, 1976, 2199
HgaI	GACGC	2 cut(s)	883, 1346
HhaI	GCGC	1 cut(s)	371
Hin6I	GCGC	1 cut(s)	369
HinP1I	GCGC	1 cut(s)	369
HincII	GTYRAC	4 cut(s)	26, 1822, 1873, 1970
HindII	GTYRAC	4 cut(s)	26, 1822, 1873, 1970
HindIII	AAGCTT	1 cut(s)	677
HpaI	GTTAAC	1 cut(s)	1873
HpaII	CCGG	3 cut(s)	662, 1976, 2199
HphI	GGTGA	6 cut(s)	329, 571, 605, 830, 1196, 1823
Hpy188I	TCNGA	7 cut(s)	184, 199, 649, 1210, 1420, 1531, 2167
HpyAV	CCTTC	7 cut(s)	1176, 1691, 1762, 1800, 2078, 2154, 2183
HpyCH4III	ACNGT	5 cut(s)	460, 1720, 1734, 2025, 2225
HpyCH4IV	ACGT	5 cut(s)	12, 576, 839, 1066, 1707
HpyCH4V	TGCA	8 cut(s)	119, 326, 1064, 1325, 1331, 1507, 1691, 2054
HpyF10VI	GCNNNNNNNGC	6 cut(s)	758, 920, 1328, 1337, 1735, 2012
HpyF3I	CTNAG	5 cut(s)	86, 648, 807, 1362, 1383
HpySE526I	ACGT	5 cut(s)	12, 576, 839, 1066, 1707
HspAI	GCGC	1 cut(s)	369
KroI	GCCGGC	1 cut(s)	1975
KroNI	GCCGGC	1 cut(s)	1977
KspAI	GTTAAC	1 cut(s)	1873
Kzo9I	GATC	3 cut(s)	309, 517, 715
LguI	GCTCTTC	1 cut(s)	1416
Lsp1109I	GCAGC	9 cut(s)	102, 257, 338, 1309, 1459, 1596, 1679, 1796, 1885
MaeI	CTAG	5 cut(s)	165, 465, 713, 1671, 2239
MaeII	ACGT	5 cut(s)	12, 576, 839, 1066, 1707
MaeIII	GTNAC	4 cut(s)	335, 826, 1681, 2225
MalI	GATC	3 cut(s)	311, 519, 717
MboI	GATC	3 cut(s)	309, 517, 715
MfeI	CAATTG	2 cut(s)	1275, 2093
MhlI	GDGCHC	2 cut(s)	1066, 1658
MlsI	TGGCCA	1 cut(s)	692
MluI	ACGCGT	1 cut(s)	875
MluNI	TGGCCA	1 cut(s)	692
MlyI	GAGTC	4 cut(s)	958, 1520, 1604, 1949
MmeI	TCCRAC	2 cut(s)	370, 479
Mox20I	TGGCCA	1 cut(s)	692
MroNI	GCCGGC	1 cut(s)	1975
MscI	TGGCCA	1 cut(s)	692
MseI	TTAA	7 cut(s)	228, 683, 1374, 1647, 1872, 2030, 2079
MslI	CAYNNNNRTG	1 cut(s)	1760
Msp20I	TGGCCA	1 cut(s)	692
MspI	CCGG	3 cut(s)	662, 1976, 2199
MspR9I	CCNGG	4 cut(s)	319, 446, 1593, 1905
MunI	CAATTG	2 cut(s)	1275, 2093
Mva1269I	GAATGC	1 cut(s)	613
MvaI	CCWGG	4 cut(s)	319, 446, 1593, 1905
MvnI	CGCG	1 cut(s)	877
MwoI	GCNNNNNNNGC	6 cut(s)	758, 920, 1328, 1337, 1735, 2012
NaeI	GCCGGC	1 cut(s)	1977
NcoI	CCATGG	1 cut(s)	51
NdeII	GATC	3 cut(s)	309, 517, 715
NgoMIV	GCCGGC	1 cut(s)	1975
NheI	GCTAGC	1 cut(s)	1670
NlaIV	GGNNCC	5 cut(s)	57, 144, 1572, 2134, 2181
NmeAIII	GCCGAG	2 cut(s)	274, 501
NmuCI	GTSAC	2 cut(s)	335, 2225
NspI	RCATGY	2 cut(s)	415, 1348
PaeR7I	CTCGAG	1 cut(s)	350
PagI	TCATGA	2 cut(s)	1239, 1936
PaqCI	CACCTGC	1 cut(s)	160
PciI	ACATGT	2 cut(s)	411, 1344
PciSI	GCTCTTC	1 cut(s)	1416
PctI	GAATGC	1 cut(s)	613
PdiI	GCCGGC	1 cut(s)	1977
PfeI	GAWTC	6 cut(s)	233, 468, 553, 1487, 1880, 1961
PflFI	GACNNNGTC	2 cut(s)	71, 440
PfoI	TCCNGGA	1 cut(s)	444
PkrI	GCNGC	9 cut(s)	92, 247, 328, 1324, 1474, 1586, 1669, 1786, 1900
PleI	GAGTC	4 cut(s)	957, 1519, 1604, 1948
PmaCI	CACGTG	1 cut(s)	1067
PmlI	CACGTG	1 cut(s)	1067
PpsI	GAGTC	4 cut(s)	957, 1519, 1604, 1948
Ppu21I	YACGTR	3 cut(s)	13, 577, 1067
PpuMI	RGGWCCY	2 cut(s)	143, 355
PscI	ACATGT	2 cut(s)	411, 1344
Psp1406I	AACGTT	1 cut(s)	1707
Psp5II	RGGWCCY	2 cut(s)	143, 355
Psp6I	CCWGG	4 cut(s)	317, 444, 1591, 1903
PspCI	CACGTG	1 cut(s)	1067
PspGI	CCWGG	4 cut(s)	317, 444, 1591, 1903
PspN4I	GGNNCC	5 cut(s)	57, 144, 1572, 2134, 2181
PspPI	GGNCC	4 cut(s)	143, 355, 641, 2132
PspPPI	RGGWCCY	2 cut(s)	143, 355
PspXI	VCTCGAGB	1 cut(s)	350
PstI	CTGCAG	1 cut(s)	1327
PsyI	GACNNNGTC	2 cut(s)	71, 440
RsaI	GTAC	4 cut(s)	529, 538, 629, 842
RsaNI	GTAC	4 cut(s)	528, 537, 628, 841
RseI	CAYNNNNRTG	1 cut(s)	1760
SapI	GCTCTTC	1 cut(s)	1416
SaqAI	TTAA	7 cut(s)	228, 683, 1374, 1647, 1872, 2030, 2079
SatI	GCNGC	9 cut(s)	91, 246, 327, 1323, 1473, 1585, 1668, 1785, 1899
Sau3AI	GATC	3 cut(s)	309, 517, 715
Sau96I	GGNCC	4 cut(s)	143, 355, 641, 2132
ScaI	AGTACT	1 cut(s)	529
SchI	GAGTC	4 cut(s)	958, 1520, 1604, 1949
ScrFI	CCNGG	4 cut(s)	319, 446, 1593, 1905
SduI	GDGCHC	2 cut(s)	1066, 1658
SfcI	CTRYAG	3 cut(s)	1305, 1323, 1632
Sfr274I	CTCGAG	1 cut(s)	350
SinI	GGWCC	4 cut(s)	143, 355, 641, 2132
SlaI	CTCGAG	1 cut(s)	350
SmiMI	CAYNNNNRTG	1 cut(s)	1760
SmlI	CTYRAG	4 cut(s)	285, 350, 359, 936
SmoI	CTYRAG	4 cut(s)	285, 350, 359, 936
SsiI	CCGC	4 cut(s)	48, 173, 1181, 1924
SspMI	CTAG	5 cut(s)	165, 465, 713, 1671, 2239
StyD4I	CCNGG	4 cut(s)	317, 444, 1591, 1903
StyI	CCWWGG	2 cut(s)	51, 637
TaaI	ACNGT	5 cut(s)	460, 1720, 1734, 2025, 2225
TaiI	ACGT	5 cut(s)	15, 579, 842, 1069, 1710
TaqI	TCGA	3 cut(s)	351, 976, 1652
TaqII	GACCGA	1 cut(s)	2120
TatI	WGTACW	2 cut(s)	527, 627
TfiI	GAWTC	6 cut(s)	233, 468, 553, 1487, 1880, 1961
Tru1I	TTAA	7 cut(s)	228, 683, 1374, 1647, 1872, 2030, 2079
Tru9I	TTAA	7 cut(s)	228, 683, 1374, 1647, 1872, 2030, 2079
TscAI	CASTG	4 cut(s)	1338, 1739, 1864, 2028
TseFI	GTSAC	2 cut(s)	335, 2225
TseI	GCWGC	9 cut(s)	90, 245, 326, 1322, 1472, 1584, 1667, 1784, 1898
Tsp45I	GTSAC	2 cut(s)	335, 2225
TspGWI	ACGGA	4 cut(s)	321, 593, 1673, 1933
TspRI	CASTG	4 cut(s)	1338, 1739, 1864, 2028
Tth111I	GACNNNGTC	2 cut(s)	71, 440
VneI	GTGCAC	1 cut(s)	1062
VpaK11BI	GGWCC	4 cut(s)	143, 355, 641, 2132
XagI	CCTNNNNNAGG	2 cut(s)	716, 2187
XapI	RAATTY	5 cut(s)	1018, 1142, 1814, 1842, 1997
XbaI	TCTAGA	1 cut(s)	464
XceI	RCATGY	2 cut(s)	415, 1348
XhoI	CTCGAG	1 cut(s)	350
XmiI	GTMKAC	2 cut(s)	1045, 1715
XspI	CTAG	5 cut(s)	165, 465, 713, 1671, 2239
ZrmI	AGTACT	1 cut(s)	529

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.