Inner membrane component of T3SS, cytoplasmic domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G38840 |
| fragaria_vesca | FvH4_6g46110 FvH4_6g46110 FvH4_6g46110 FvH4_6g46110 |
| malus_domestica | MD09G1076900.v1.1 |
| prunus_persica | Prupe.3G247200_v2.0.a1 |
| pyrus_communis | pycom09g00410 |
| rosa_chinensis | RchiOBHm_Chr2g0164301 RchiOBHm_Chr2g0164311 RchiOBHm_Chr2g0164441 RchiOBHm_Chr2g0164481 |
| rosa_laevigata | RLG00000021452 RLG00000021462 |
| rosa_multiflora | Rmu_sc0000144.1_g000022 Rmu_sc0002082.1_g000003 Rmu_sc0007154.1_g000011 Rmu_sc0020353.1_g000001 Rmu_sc0024157.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00086560 Rroxscaffold_2G00086640 |
| rosa_rugosa | Rorug02G0508000 Rorug02G0508500 Rorug02G0508700 |
| rosa_samantha | Rh2AG575900 Rh2AG576000 Rh2AG576700 Rh2BG587700 Rh2CG557600 Rh2CG557700 Rh2CG557800 Rh2CG558500 Rh2DG596400 Rh2DG598200 |
| rosa_wichuraiana | Rw2G047780 Rw2G047870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1871 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1418 |
| AccB1I | GGYRCC | 3 cut(s) | 290, 332, 2149 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1574 |
| AccI | GTMKAC | 3 cut(s) | 342, 390, 1682 |
| AccII | CGCG | 4 cut(s) | 44, 221, 962, 964 |
| AclWI | GGATC | 1 cut(s) | 1436 |
| AcoI | YGGCCR | 1 cut(s) | 382 |
| AcsI | RAATTY | 2 cut(s) | 1006, 1127 |
| AcuI | CTGAAG | 4 cut(s) | 1683, 1797, 1920, 2178 |
| AcvI | CACGTG | 1 cut(s) | 1055 |
| AcyI | GRCGYC | 2 cut(s) | 291, 333 |
| AfaI | GTAC | 7 cut(s) | 473, 493, 502, 656, 1198, 1600, 2097 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 116, 117, 316, 1467, 1574, 2159 |
| AflIII | ACRYGT | 3 cut(s) | 375, 1054, 1329 |
| AjnI | CCWGG | 2 cut(s) | 519, 1858 |
| Alw21I | GWGCWC | 4 cut(s) | 417, 447, 1054, 1770 |
| Alw26I | GTCTC | 5 cut(s) | 71, 224, 1010, 1305, 2104 |
| Alw44I | GTGCAC | 1 cut(s) | 1050 |
| AlwI | GGATC | 1 cut(s) | 1436 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 991, 1949 |
| Ama87I | CYCGRG | 2 cut(s) | 314, 2105 |
| AoxI | GGCC | 2 cut(s) | 119, 382 |
| ApaLI | GTGCAC | 1 cut(s) | 1050 |
| ApeKI | GCWGC | 6 cut(s) | 1252, 1457, 1508, 1511, 1751, 1853 |
| ApoI | RAATTY | 2 cut(s) | 1006, 1127 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 987 |
| AspLEI | GCGC | 5 cut(s) | 223, 293, 335, 964, 1858 |
| AspS9I | GGNCC | 5 cut(s) | 5, 119, 319, 605, 2102 |
| AsuC2I | CCSGG | 1 cut(s) | 386 |
| AsuHPI | GGTGA | 4 cut(s) | 569, 797, 1463, 2183 |
| AvaI | CYCGRG | 2 cut(s) | 314, 2105 |
| AvaII | GGWCC | 4 cut(s) | 5, 319, 605, 2102 |
| BaeGI | GKGCMC | 1 cut(s) | 1054 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 492, 525 |
| BanI | GGYRCC | 3 cut(s) | 290, 332, 2149 |
| BanII | GRGCYC | 1 cut(s) | 50 |
| BauI | CACGAG | 2 cut(s) | 1769, 1955 |
| BbrPI | CACGTG | 1 cut(s) | 1055 |
| BbsI | GAAGAC | 2 cut(s) | 1302, 1414 |
| Bbv12I | GWGCWC | 4 cut(s) | 417, 447, 1054, 1770 |
| BbvI | GCAGC | 6 cut(s) | 1239, 1469, 1495, 1498, 1763, 1840 |
| BccI | CCATC | 9 cut(s) | 67, 109, 281, 722, 776, 1186, 1523, 1723, 2168 |
| BceAI | ACGGC | 3 cut(s) | 245, 304, 346 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 566, 600 |
| BciT130I | CCWGG | 2 cut(s) | 521, 1860 |
| BcnI | CCSGG | 1 cut(s) | 386 |
| BcoDI | GTCTC | 5 cut(s) | 71, 224, 1010, 1305, 2104 |
| BfaI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| BfmI | CTRYAG | 3 cut(s) | 1290, 1713, 1971 |
| BfoI | RGCGCY | 2 cut(s) | 294, 336 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1702 |
| BglII | AGATCT | 1 cut(s) | 1393 |
| BisI | GCNGC | 8 cut(s) | 14, 224, 1253, 1458, 1509, 1512, 1752, 1854 |
| BlsI | GCNGC | 8 cut(s) | 15, 225, 1254, 1459, 1510, 1513, 1753, 1855 |
| BmcAI | AGTACT | 2 cut(s) | 493, 2097 |
| Bme1390I | CCNGG | 3 cut(s) | 386, 521, 1860 |
| Bme18I | GGWCC | 4 cut(s) | 5, 319, 605, 2102 |
| BmeT110I | CYCGRG | 2 cut(s) | 314, 2105 |
| BmgT120I | GGNCC | 5 cut(s) | 5, 119, 319, 605, 2102 |
| BmiI | GGNNCC | 7 cut(s) | 6, 49, 120, 292, 334, 2104, 2151 |
| BmrFI | CCNGG | 3 cut(s) | 386, 521, 1860 |
| BmrI | ACTGGG | 1 cut(s) | 1693 |
| BmuI | ACTGGG | 1 cut(s) | 1693 |
| BpiI | GAAGAC | 2 cut(s) | 1302, 1414 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 68, 100, 1938, 1970 |
| BpmI | CTGGAG | 4 cut(s) | 431, 1329, 1382, 1652 |
| BpuEI | CTTGAG | 3 cut(s) | 308, 909, 924 |
| BpuMI | CCSGG | 1 cut(s) | 386 |
| Bsa29I | ATCGAT | 1 cut(s) | 2197 |
| BsaAI | YACGTR | 1 cut(s) | 1055 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1917 |
| BsaHI | GRCGYC | 2 cut(s) | 291, 333 |
| BsaI | GGTCTC | 2 cut(s) | 71, 2104 |
| BsaJI | CCNNGG | 5 cut(s) | 42, 250, 484, 601, 774 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1701, 1731 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 116, 117, 316, 1467, 1574, 2159 |
| Bse1I | ACTGG | 5 cut(s) | 304, 1281, 1323, 1399, 1699 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1917 |
| BseBI | CCWGG | 2 cut(s) | 521, 1860 |
| BseCI | ATCGAT | 1 cut(s) | 2197 |
| BseDI | CCNNGG | 5 cut(s) | 42, 250, 484, 601, 774 |
| BseGI | GGATG | 9 cut(s) | 197, 233, 273, 760, 784, 1327, 1528, 1972, 2183 |
| BseJI | GATNNNNATC | 1 cut(s) | 1917 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 116, 117, 316, 1467, 1574, 2159 |
| BseMII | CTCAG | 5 cut(s) | 603, 968, 1359, 1404, 1663 |
| BseNI | ACTGG | 5 cut(s) | 304, 1281, 1323, 1399, 1699 |
| BseRI | GAGGAG | 5 cut(s) | 141, 144, 147, 150, 153 |
| BseSI | GKGCMC | 1 cut(s) | 1054 |
| BseX3I | CGGCCG | 1 cut(s) | 382 |
| BseXI | GCAGC | 6 cut(s) | 1239, 1469, 1495, 1498, 1763, 1840 |
| Bsh1236I | CGCG | 4 cut(s) | 44, 221, 962, 964 |
| Bsh1285I | CGRYCG | 3 cut(s) | 385, 1138, 2197 |
| BshFI | GGCC | 2 cut(s) | 121, 384 |
| BshNI | GGYRCC | 3 cut(s) | 290, 332, 2149 |
| BshVI | ATCGAT | 1 cut(s) | 2197 |
| BsiEI | CGRYCG | 3 cut(s) | 385, 1138, 2197 |
| BsiHKAI | GWGCWC | 4 cut(s) | 417, 447, 1054, 1770 |
| BsiHKCI | CYCGRG | 2 cut(s) | 314, 2105 |
| BsiSI | CCGG | 2 cut(s) | 227, 385 |
| BslFI | GGGAC | 2 cut(s) | 248, 2088 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 116, 117, 316, 1467, 1574, 2159 |
| BsmAI | GTCTC | 5 cut(s) | 71, 224, 1010, 1305, 2104 |
| BsmBI | CGTCTC | 1 cut(s) | 1305 |
| BsmFI | GGGAC | 2 cut(s) | 248, 2088 |
| BsmI | GAATGC | 1 cut(s) | 577 |
| BsnI | GGCC | 2 cut(s) | 121, 384 |
| Bso31I | GGTCTC | 2 cut(s) | 71, 2104 |
| BsoBI | CYCGRG | 2 cut(s) | 314, 2105 |
| Bsp1286I | GDGCHC | 5 cut(s) | 50, 417, 447, 1054, 1770 |
| Bsp143I | GATC | 6 cut(s) | 679, 957, 1135, 1393, 1441, 2194 |
| BspANI | GGCC | 2 cut(s) | 121, 384 |
| BspCNI | CTCAG | 5 cut(s) | 604, 967, 1360, 1403, 1662 |
| BspDI | ATCGAT | 1 cut(s) | 2197 |
| BspFNI | CGCG | 4 cut(s) | 44, 221, 962, 964 |
| BspLI | GGNNCC | 7 cut(s) | 6, 49, 120, 292, 334, 2104, 2151 |
| BspPI | GGATC | 1 cut(s) | 1436 |
| BspQI | GCTCTTC | 1 cut(s) | 990 |
| BspT107I | GGYRCC | 3 cut(s) | 290, 332, 2149 |
| BspTNI | GGTCTC | 2 cut(s) | 71, 2104 |
| BsrI | ACTGG | 5 cut(s) | 304, 1281, 1323, 1399, 1699 |
| BssECI | CCNNGG | 5 cut(s) | 42, 250, 484, 601, 774 |
| BssMI | GATC | 6 cut(s) | 679, 957, 1135, 1393, 1441, 2194 |
| BssNAI | GTATAC | 1 cut(s) | 1683 |
| BssNI | GRCGYC | 2 cut(s) | 291, 333 |
| BssSI | CACGAG | 2 cut(s) | 1769, 1955 |
| BssT1I | CCWWGG | 3 cut(s) | 250, 484, 601 |
| Bst1107I | GTATAC | 1 cut(s) | 1683 |
| Bst2BI | CACGAG | 2 cut(s) | 1769, 1955 |
| Bst2UI | CCWGG | 2 cut(s) | 521, 1860 |
| Bst4CI | ACNGT | 3 cut(s) | 609, 1687, 1980 |
| Bst6I | CTCTTC | 3 cut(s) | 990, 1008, 1206 |
| BstACI | GRCGYC | 2 cut(s) | 291, 333 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1322, 1967 |
| BstBAI | YACGTR | 1 cut(s) | 1055 |
| BstC8I | GCNNGC | 2 cut(s) | 46, 687 |
| BstDEI | CTNAG | 6 cut(s) | 612, 954, 1347, 1368, 1390, 1649 |
| BstDSI | CCRYGG | 1 cut(s) | 42 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2157 |
| BstF5I | GGATG | 9 cut(s) | 197, 233, 273, 760, 784, 1327, 1528, 1972, 2183 |
| BstFNI | CGCG | 4 cut(s) | 44, 221, 962, 964 |
| BstH2I | RGCGCY | 2 cut(s) | 294, 336 |
| BstHHI | GCGC | 5 cut(s) | 223, 293, 335, 964, 1858 |
| BstKTI | GATC | 6 cut(s) | 682, 960, 1138, 1396, 1444, 2197 |
| BstMAI | GTCTC | 5 cut(s) | 71, 224, 1010, 1305, 2104 |
| BstMBI | GATC | 6 cut(s) | 679, 957, 1135, 1393, 1441, 2194 |
| BstMCI | CGRYCG | 3 cut(s) | 385, 1138, 2197 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 19, 41, 297, 722, 908, 1313, 1322, 1702, 1967 |
| BstNI | CCWGG | 2 cut(s) | 521, 1860 |
| BstNSI | RCATGY | 3 cut(s) | 379, 554, 1333 |
| BstSCI | CCNGG | 3 cut(s) | 384, 519, 1858 |
| BstSFI | CTRYAG | 3 cut(s) | 1290, 1713, 1971 |
| BstSLI | GKGCMC | 1 cut(s) | 1054 |
| BstUI | CGCG | 4 cut(s) | 44, 221, 962, 964 |
| BstV1I | GCAGC | 6 cut(s) | 1239, 1469, 1495, 1498, 1763, 1840 |
| BstV2I | GAAGAC | 2 cut(s) | 1302, 1414 |
| BstX2I | RGATCY | 1 cut(s) | 1393 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1706 |
| BstYI | RGATCY | 1 cut(s) | 1393 |
| BstZ17I | GTATAC | 1 cut(s) | 1683 |
| BstZI | CGGCCG | 1 cut(s) | 382 |
| Bsu15I | ATCGAT | 1 cut(s) | 2197 |
| BsuRI | GGCC | 2 cut(s) | 121, 384 |
| BsuTUI | ATCGAT | 1 cut(s) | 2197 |
| BtgI | CCRYGG | 1 cut(s) | 42 |
| BtsCI | GGATG | 9 cut(s) | 197, 233, 273, 760, 784, 1327, 1528, 1972, 2183 |
| BtsI | GCAGTG | 1 cut(s) | 447 |
| BtsIMutI | CAGTG | 7 cut(s) | 447, 1019, 1299, 1316, 1657, 1706, 1976 |
| Cac8I | GCNNGC | 2 cut(s) | 46, 687 |
| CaiI | CAGNNNCTG | 2 cut(s) | 991, 1949 |
| CfoI | GCGC | 5 cut(s) | 223, 293, 335, 964, 1858 |
| Cfr13I | GGNCC | 5 cut(s) | 5, 119, 319, 605, 2102 |
| Cfr42I | CCGCGG | 1 cut(s) | 45 |
| ClaI | ATCGAT | 1 cut(s) | 2197 |
| CseI | GACGC | 1 cut(s) | 1322 |
| CsiI | ACCWGGT | 1 cut(s) | 519 |
| Csp6I | GTAC | 7 cut(s) | 472, 492, 501, 655, 1197, 1599, 2096 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 442, 477 |
| CviAII | CATG | 9 cut(s) | 297, 376, 437, 497, 551, 1073, 1330, 1831, 2145 |
| CviQI | GTAC | 7 cut(s) | 472, 492, 501, 655, 1197, 1599, 2096 |
| DdeI | CTNAG | 6 cut(s) | 612, 954, 1347, 1368, 1390, 1649 |
| DinI | GGCGCC | 2 cut(s) | 292, 334 |
| DpnI | GATC | 6 cut(s) | 681, 959, 1137, 1395, 1443, 2196 |
| DpnII | GATC | 6 cut(s) | 679, 957, 1135, 1393, 1441, 2194 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1418 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1418 |
| EaeI | YGGCCR | 1 cut(s) | 382 |
| EagI | CGGCCG | 1 cut(s) | 382 |
| Eam1104I | CTCTTC | 3 cut(s) | 990, 1008, 1206 |
| EarI | CTCTTC | 3 cut(s) | 990, 1008, 1206 |
| EciI | GGCGGA | 2 cut(s) | 9, 1545 |
| EclXI | CGGCCG | 1 cut(s) | 382 |
| Eco130I | CCWWGG | 3 cut(s) | 250, 484, 601 |
| Eco24I | GRGCYC | 1 cut(s) | 50 |
| Eco31I | GGTCTC | 2 cut(s) | 71, 2104 |
| Eco47I | GGWCC | 4 cut(s) | 5, 319, 605, 2102 |
| Eco52I | CGGCCG | 1 cut(s) | 382 |
| Eco57I | CTGAAG | 4 cut(s) | 1683, 1797, 1920, 2178 |
| Eco72I | CACGTG | 1 cut(s) | 1055 |
| Eco88I | CYCGRG | 2 cut(s) | 314, 2105 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2157 |
| EcoO109I | RGGNCCY | 3 cut(s) | 5, 119, 319 |
| EcoRII | CCWGG | 2 cut(s) | 519, 1858 |
| EcoT14I | CCWWGG | 3 cut(s) | 250, 484, 601 |
| EcoT22I | ATGCAT | 2 cut(s) | 1327, 2011 |
| EcoT38I | GRGCYC | 1 cut(s) | 50 |
| EgeI | GGCGCC | 2 cut(s) | 292, 334 |
| EheI | GGCGCC | 2 cut(s) | 292, 334 |
| ErhI | CCWWGG | 3 cut(s) | 250, 484, 601 |
| Esp3I | CGTCTC | 1 cut(s) | 1305 |
| FaeI | CATG | 9 cut(s) | 300, 379, 440, 500, 554, 1076, 1333, 1834, 2148 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 705, 737, 804, 836, 1092, 1124, 1239, 1271 |
| FaqI | GGGAC | 2 cut(s) | 248, 2088 |
| FatI | CATG | 9 cut(s) | 296, 375, 436, 496, 550, 1072, 1329, 1830, 2144 |
| FauI | CCCGC | 2 cut(s) | 37, 49 |
| FauNDI | CATATG | 1 cut(s) | 882 |
| FblI | GTMKAC | 3 cut(s) | 342, 390, 1682 |
| Fnu4HI | GCNGC | 8 cut(s) | 14, 224, 1253, 1458, 1509, 1512, 1752, 1854 |
| FokI | GGATG | 9 cut(s) | 184, 220, 260, 767, 791, 1334, 1515, 1979, 2170 |
| FriOI | GRGCYC | 1 cut(s) | 50 |
| Fsp4HI | GCNGC | 8 cut(s) | 14, 224, 1253, 1458, 1509, 1512, 1752, 1854 |
| FspBI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| GlaI | GCGC | 5 cut(s) | 222, 292, 334, 963, 1857 |
| GluI | GCNGC | 8 cut(s) | 14, 224, 1253, 1458, 1509, 1512, 1752, 1854 |
| GsuI | CTGGAG | 4 cut(s) | 431, 1329, 1382, 1652 |
| HaeII | RGCGCY | 2 cut(s) | 294, 336 |
| HaeIII | GGCC | 2 cut(s) | 121, 384 |
| HapII | CCGG | 2 cut(s) | 227, 385 |
| HgaI | GACGC | 1 cut(s) | 1322 |
| HhaI | GCGC | 5 cut(s) | 223, 293, 335, 964, 1858 |
| Hin1I | GRCGYC | 2 cut(s) | 291, 333 |
| Hin1II | CATG | 9 cut(s) | 300, 379, 440, 500, 554, 1076, 1333, 1834, 2148 |
| Hin6I | GCGC | 5 cut(s) | 221, 291, 333, 962, 1856 |
| HinP1I | GCGC | 5 cut(s) | 221, 291, 333, 962, 1856 |
| HincII | GTYRAC | 4 cut(s) | 343, 391, 511, 1828 |
| HindII | GTYRAC | 4 cut(s) | 343, 391, 511, 1828 |
| HindIII | AAGCTT | 1 cut(s) | 714 |
| HpaI | GTTAAC | 2 cut(s) | 511, 1828 |
| HpaII | CCGG | 2 cut(s) | 227, 385 |
| HphI | GGTGA | 4 cut(s) | 569, 797, 1463, 2183 |
| HpyAV | CCTTC | 4 cut(s) | 1161, 1658, 2124, 2153 |
| HpyCH4III | ACNGT | 3 cut(s) | 609, 1687, 1980 |
| HpyCH4IV | ACGT | 1 cut(s) | 1054 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 19, 41, 297, 722, 908, 1313, 1322, 1702, 1967 |
| HpyF3I | CTNAG | 6 cut(s) | 612, 954, 1347, 1368, 1390, 1649 |
| HpySE526I | ACGT | 1 cut(s) | 1054 |
| Hsp92I | GRCGYC | 2 cut(s) | 291, 333 |
| Hsp92II | CATG | 9 cut(s) | 300, 379, 440, 500, 554, 1076, 1333, 1834, 2148 |
| HspAI | GCGC | 5 cut(s) | 221, 291, 333, 962, 1856 |
| KasI | GGCGCC | 2 cut(s) | 290, 332 |
| KspAI | GTTAAC | 2 cut(s) | 511, 1828 |
| KspI | CCGCGG | 1 cut(s) | 45 |
| Kzo9I | GATC | 6 cut(s) | 679, 957, 1135, 1393, 1441, 2194 |
| LguI | GCTCTTC | 1 cut(s) | 990 |
| LmnI | GCTCC | 6 cut(s) | 53, 412, 450, 1088, 1709, 1946 |
| Lsp1109I | GCAGC | 6 cut(s) | 1239, 1469, 1495, 1498, 1763, 1840 |
| MabI | ACCWGGT | 1 cut(s) | 519 |
| MaeI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| MaeII | ACGT | 1 cut(s) | 1054 |
| MaeIII | GTNAC | 1 cut(s) | 793 |
| MalI | GATC | 6 cut(s) | 681, 959, 1137, 1395, 1443, 2196 |
| MboI | GATC | 6 cut(s) | 679, 957, 1135, 1393, 1441, 2194 |
| MfeI | CAATTG | 4 cut(s) | 1092, 1182, 1260, 1373 |
| MflI | RGATCY | 1 cut(s) | 1393 |
| MhlI | GDGCHC | 5 cut(s) | 50, 417, 447, 1054, 1770 |
| MluCI | AATT | 7 cut(s) | 347, 1006, 1092, 1127, 1182, 1260, 1373 |
| Mly113I | GGCGCC | 2 cut(s) | 291, 333 |
| MlyI | GAGTC | 5 cut(s) | 203, 931, 1643, 1781, 1947 |
| MmeI | TCCRAC | 1 cut(s) | 1469 |
| Mph1103I | ATGCAT | 2 cut(s) | 1327, 2011 |
| MroXI | GAANNNNTTC | 1 cut(s) | 987 |
| MseI | TTAA | 4 cut(s) | 510, 647, 1536, 1827 |
| MslI | CAYNNNNRTG | 1 cut(s) | 555 |
| MspA1I | CMGCKG | 2 cut(s) | 44, 1193 |
| MspI | CCGG | 2 cut(s) | 227, 385 |
| MspR9I | CCNGG | 3 cut(s) | 386, 521, 1860 |
| MunI | CAATTG | 4 cut(s) | 1092, 1182, 1260, 1373 |
| Mva1269I | GAATGC | 1 cut(s) | 577 |
| MvaI | CCWGG | 2 cut(s) | 521, 1860 |
| MvnI | CGCG | 4 cut(s) | 44, 221, 962, 964 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 19, 41, 297, 722, 908, 1313, 1322, 1702, 1967 |
| NarI | GGCGCC | 2 cut(s) | 291, 333 |
| NciI | CCSGG | 1 cut(s) | 386 |
| NdeI | CATATG | 1 cut(s) | 882 |
| NdeII | GATC | 6 cut(s) | 679, 957, 1135, 1393, 1441, 2194 |
| NlaIII | CATG | 9 cut(s) | 300, 379, 440, 500, 554, 1076, 1333, 1834, 2148 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 49, 120, 292, 334, 2104, 2151 |
| NmeAIII | GCCGAG | 1 cut(s) | 799 |
| NsiI | ATGCAT | 2 cut(s) | 1327, 2011 |
| NspI | RCATGY | 3 cut(s) | 379, 554, 1333 |
| PaeR7I | CTCGAG | 1 cut(s) | 314 |
| PciI | ACATGT | 2 cut(s) | 375, 1329 |
| PciSI | GCTCTTC | 1 cut(s) | 990 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 387, 396 |
| PctI | GAATGC | 1 cut(s) | 577 |
| PdmI | GAANNNNTTC | 1 cut(s) | 987 |
| PfeI | GAWTC | 6 cut(s) | 988, 1472, 1835, 1895, 1913, 2132 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1574 |
| PkrI | GCNGC | 8 cut(s) | 15, 225, 1254, 1459, 1510, 1513, 1753, 1855 |
| Ple19I | CGATCG | 2 cut(s) | 1138, 2197 |
| PleI | GAGTC | 5 cut(s) | 203, 931, 1642, 1780, 1947 |
| PluTI | GGCGCC | 2 cut(s) | 294, 336 |
| PmaCI | CACGTG | 1 cut(s) | 1055 |
| PmlI | CACGTG | 1 cut(s) | 1055 |
| PpsI | GAGTC | 5 cut(s) | 203, 931, 1642, 1780, 1947 |
| Ppu21I | YACGTR | 1 cut(s) | 1055 |
| PpuMI | RGGWCCY | 2 cut(s) | 5, 319 |
| PscI | ACATGT | 2 cut(s) | 375, 1329 |
| PsiI | TTATAA | 1 cut(s) | 1871 |
| Psp5II | RGGWCCY | 2 cut(s) | 5, 319 |
| Psp6I | CCWGG | 2 cut(s) | 519, 1858 |
| PspCI | CACGTG | 1 cut(s) | 1055 |
| PspGI | CCWGG | 2 cut(s) | 519, 1858 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 49, 120, 292, 334, 2104, 2151 |
| PspPI | GGNCC | 5 cut(s) | 5, 119, 319, 605, 2102 |
| PspPPI | RGGWCCY | 2 cut(s) | 5, 319 |
| PspXI | VCTCGAGB | 1 cut(s) | 314 |
| PstNI | CAGNNNCTG | 2 cut(s) | 991, 1949 |
| PsuI | RGATCY | 1 cut(s) | 1393 |
| PvuI | CGATCG | 2 cut(s) | 1138, 2197 |
| RsaI | GTAC | 7 cut(s) | 473, 493, 502, 656, 1198, 1600, 2097 |
| RsaNI | GTAC | 7 cut(s) | 472, 492, 501, 655, 1197, 1599, 2096 |
| RseI | CAYNNNNRTG | 1 cut(s) | 555 |
| SacII | CCGCGG | 1 cut(s) | 45 |
| SalI | GTCGAC | 2 cut(s) | 341, 389 |
| SapI | GCTCTTC | 1 cut(s) | 990 |
| SaqAI | TTAA | 4 cut(s) | 510, 647, 1536, 1827 |
| SatI | GCNGC | 8 cut(s) | 14, 224, 1253, 1458, 1509, 1512, 1752, 1854 |
| Sau3AI | GATC | 6 cut(s) | 679, 957, 1135, 1393, 1441, 2194 |
| Sau96I | GGNCC | 5 cut(s) | 5, 119, 319, 605, 2102 |
| ScaI | AGTACT | 2 cut(s) | 493, 2097 |
| SchI | GAGTC | 5 cut(s) | 203, 931, 1643, 1781, 1947 |
| ScrFI | CCNGG | 3 cut(s) | 386, 521, 1860 |
| SduI | GDGCHC | 5 cut(s) | 50, 417, 447, 1054, 1770 |
| SexAI | ACCWGGT | 1 cut(s) | 519 |
| SfcI | CTRYAG | 3 cut(s) | 1290, 1713, 1971 |
| SfoI | GGCGCC | 2 cut(s) | 292, 334 |
| Sfr274I | CTCGAG | 1 cut(s) | 314 |
| Sfr303I | CCGCGG | 1 cut(s) | 45 |
| SgrBI | CCGCGG | 1 cut(s) | 45 |
| SinI | GGWCC | 4 cut(s) | 5, 319, 605, 2102 |
| SlaI | CTCGAG | 1 cut(s) | 314 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 555 |
| SmlI | CTYRAG | 4 cut(s) | 314, 323, 924, 939 |
| SmoI | CTYRAG | 4 cut(s) | 314, 323, 924, 939 |
| Sse9I | AATT | 7 cut(s) | 347, 1006, 1092, 1127, 1182, 1260, 1373 |
| SspDI | GGCGCC | 2 cut(s) | 290, 332 |
| SspMI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| StyD4I | CCNGG | 3 cut(s) | 384, 519, 1858 |
| StyI | CCWWGG | 3 cut(s) | 250, 484, 601 |
| TaaI | ACNGT | 3 cut(s) | 609, 1687, 1980 |
| TaiI | ACGT | 1 cut(s) | 1057 |
| TaqI | TCGA | 6 cut(s) | 315, 342, 390, 1036, 1928, 2197 |
| TasI | AATT | 7 cut(s) | 347, 1006, 1092, 1127, 1182, 1260, 1373 |
| TatI | WGTACW | 4 cut(s) | 491, 654, 1598, 2095 |
| TauI | GCSGC | 2 cut(s) | 16, 226 |
| TfiI | GAWTC | 6 cut(s) | 988, 1472, 1835, 1895, 1913, 2132 |
| Tru1I | TTAA | 4 cut(s) | 510, 647, 1536, 1827 |
| Tru9I | TTAA | 4 cut(s) | 510, 647, 1536, 1827 |
| TscAI | CASTG | 7 cut(s) | 447, 1026, 1306, 1323, 1657, 1706, 1983 |
| TseI | GCWGC | 6 cut(s) | 1252, 1457, 1508, 1511, 1751, 1853 |
| TspGWI | ACGGA | 1 cut(s) | 839 |
| TspRI | CASTG | 7 cut(s) | 447, 1026, 1306, 1323, 1657, 1706, 1983 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1574 |
| VneI | GTGCAC | 1 cut(s) | 1050 |
| VpaK11BI | GGWCC | 4 cut(s) | 5, 319, 605, 2102 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2157 |
| XapI | RAATTY | 2 cut(s) | 1006, 1127 |
| XceI | RCATGY | 3 cut(s) | 379, 554, 1333 |
| XhoI | CTCGAG | 1 cut(s) | 314 |
| XmiI | GTMKAC | 3 cut(s) | 342, 390, 1682 |
| XmnI | GAANNNNTTC | 1 cut(s) | 987 |
| XspI | CTAG | 7 cut(s) | 59, 141, 1155, 1167, 1352, 1620, 1905 |
| ZrmI | AGTACT | 2 cut(s) | 493, 2097 |
| Zsp2I | ATGCAT | 2 cut(s) | 1327, 2011 |