Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0003377

Physical Location & Seq

Genomic Coordinates Reverse (-)

5419380 .. 5424593

Gene Structure 5214 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1076900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGACGAACGCCATGGGTCCTCCGCCAGTCCTCGACTCCGAAACCCTAAACACCGAACCGGCCGGAACGTCGTCGTCTTCGACCACAATGAAGCCCCCAATGGGTCCCCCGCCTTCCAAAAACCCTAGCCCTCCGCCTCCACCACAGTCCGAATCCCCAATCCCCGAAGACCAGCTCCAATCCAGTCCCGCCGTTAACGATTCAACCGAAGCAGCCGAAGAAAATGCCAAGCAGTCCTCAAACTCGAAGCCGCAATCTCACAGCGTCCCGATTCCGTACACGATTCCGCCCTGGAATGCAGCTCCGTGCCACCAGTTCCAGCTCGAGGTTCTCAAGGACGGTGCTATCATCAACCAATTCGATGTATACGAGAAAGGAGCGTACATGTTTGGCCGAATCGACCTCTGCGACTTTGTGCTGGAGCATCCGACTGTTTCTCGCTTCCATGCCGTTCTTCAGTTCAAGAGAAGTGGGGAGGCGTATATTTACGATCTTGGGAGTACTCACGGCACTTTCGTTAACAAGAATCAGGTGAACAAAAAGGTTTACGTGGATTTACGCGTTGGTGATGTCATCCGCTTTGGGCTTTCAACTCGTCTGTACATTTTCCAAGGACCATCCGATCTGATGCCACCGGAAAAAGACTTGAAGCTTTTAAAAATAGCCAAAATGCGTGAAGACATCCTAGATCAGGAAGCATCACTTCAACGGGCAAGACATGAAGCTTCTCTTGCTGATGGCATCTCATGGGGCATGGATGAGGATGCTATTGAGGAAGCTGAGGATGACGGTGAGGAAGTAACTTGGCAAACATACAAAGGACAGCTAACAGAAAAACAAGAAAAAACCCGCGAAAAAGTACTTAAAAGATTGGAAAAGATTGCTCATATGAAGAAGGAGATAGATGCTATTCGTGCTAAAGACATCCCTCAAGGTGGGTTGACTCAAGGACAACAAACTCAGATTGCTCGAAATGAACAGAGAATGGAACAGATTATGGAAGAACTTGAAAATCTGGAAGAGACGTTGAATGAGAGTATTCGAGAAAGTTTAGGTGCGCGTGTTGGGAAAGCATCTCGTGGTAAGAAGAAAGGAGCAGTTGAAGAAGAAGAAGAACTTTTGAGTGATGATGATGAATTCTATGACCGAACAAAGAAGCCTTCAAGTAAAAAGGCAGGTGAAAACCAAAGTGTTGAAACCGCGGACTCTCTTCTCGACAAGAGAGATGTGATCGTGAAAGAAATGGAAGAGAAGAAAGAATTGCTTTTAGTTGAGAAAGCCAAAATGGAATCAGAAACTGTAGAAAAAACTGATGCTGCAGATGCACTGGATGCATTCATGTCGGGGCTTTCAACTAAGCTAGTGCTTGATAAAACCGAGGAACTTCAAAAGGAACTATCAGCTCTCCAGTCCGAGTTGGACAGGGTAATGTTCCTTTTGAAGATTGCTGACCCAACTGGTGAAGCTGCCAAGAAAAGGGATTCAAAAGTGCAAGAGGTGCAAGAGTCTAAACCTAACAAATCTGAAACTCCTGCCACTGCCATAGAAAAGCAACCTCCAATCAAACCAAAGGAAAGTAGGAAACCCGAAAAACCAGCAAATGACTCTATACTGAAAGAGGGAACTACAGATGTTACCACGAATCCAGCTGCTGCTGAGATTGTAACTGATGCAACAGAAGGAAAAAAAGTTGTGTATGCTGTTGCAAAGCCACAGTGGCTTGGGGCTGTTGAGGACAGTAAAACTGAGGAGAATCGTCAAGAGGCAGCACCTGCAGCACCTTCAGATGAGCACGAGGCTGATGGATTTATCGACTATAAAGACAGGAAAAAGGTTTTGGAGACGGAATCTGGGATTGAAAATGCTGCCCCTGGTTTGATTATACGGAAGCGGAAACAAGTTCAAGAATCTGAAGGTAATGACAATGATTCTCGTTTGGCATCCTCAACCGGACCTGAGTTCATGGCAGAGGATGCTGTGGCACTGTTGTTAAAACATAAAAGAGGCTATTATGCACCAGATAATGAGAGCCAAGACGTTTCAGAAGGGAAAAAGTCGAGCAAGGATAAGAAGCCTAAAAGAGTTCTTGGTCCCGAGAAACCTTCATTTCTCGATACTAATACTGAGGAAACGTGGGTGCCTCCTGAAGGACAATCTGGCGATGGACGAACATCCTTGAACAGTCGCTATGGTTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA

Protein Analysis

733

Amino Acids

81.21

Weight (kDa)

4.97

Isoelectric Point (pI)

54.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	124 - 196	3.7e-09	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	128 - 195	9.3e-21	FHA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38840
fragaria_vesca	FvH4_6g46110 FvH4_6g46110 FvH4_6g46110 FvH4_6g46110
malus_domestica	MD09G1076900.v1.1
prunus_persica	Prupe.3G247200_v2.0.a1
pyrus_communis	pycom09g00410
rosa_chinensis	RchiOBHm_Chr2g0164301 RchiOBHm_Chr2g0164311 RchiOBHm_Chr2g0164441 RchiOBHm_Chr2g0164481
rosa_laevigata	RLG00000021452 RLG00000021462
rosa_multiflora	Rmu_sc0000144.1_g000022 Rmu_sc0002082.1_g000003 Rmu_sc0007154.1_g000011 Rmu_sc0020353.1_g000001 Rmu_sc0024157.1_g000001
rosa_roxburghii	Rroxscaffold_2G00086560 Rroxscaffold_2G00086640
rosa_rugosa	Rorug02G0508000 Rorug02G0508500 Rorug02G0508700
rosa_samantha	Rh2AG575900 Rh2AG576000 Rh2AG576700 Rh2BG587700 Rh2CG557600 Rh2CG557700 Rh2CG557800 Rh2CG558500 Rh2DG596400 Rh2DG598200
rosa_wichuraiana	Rw2G047780 Rw2G047870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1166, 1780
Acc36I	ACCTGC	2 cut(s)	1166, 1780
AccB1I	GGYRCC	1 cut(s)	2137
AccI	GTMKAC	1 cut(s)	366
AccII	CGCG	4 cut(s)	561, 852, 1060, 1202
AcoI	YGGCCR	2 cut(s)	60, 391
AcsI	RAATTY	1 cut(s)	1136
AcuI	CTGAAG	4 cut(s)	440, 1767, 1932, 2166
AfaI	GTAC	5 cut(s)	278, 383, 502, 602, 861
AfiI	CCNNNNNNNGG	6 cut(s)	101, 325, 691, 935, 1476, 2147
AflIII	ACRYGT	2 cut(s)	384, 559
AjnI	CCWGG	2 cut(s)	290, 1870
AjuI	GAANNNNNNNTTGG	2 cut(s)	1820, 1852
Alw21I	GWGCWC	1 cut(s)	1794
Alw26I	GTCTC	2 cut(s)	1016, 1835
AlwNI	CAGNNNCTG	3 cut(s)	1298, 1652, 1772
Ama87I	CYCGRG	2 cut(s)	323, 2093
AoxI	GGCC	2 cut(s)	60, 391
ApeKI	GCWGC	9 cut(s)	212, 299, 1316, 1466, 1649, 1652, 1766, 1775, 1865
ApoI	RAATTY	1 cut(s)	1136
AspLEI	GCGC	1 cut(s)	1060
AspS9I	GGNCC	5 cut(s)	17, 104, 614, 1952, 2090
AsuHPI	GGTGA	5 cut(s)	544, 578, 803, 1190, 1472
AvaI	CYCGRG	2 cut(s)	323, 2093
AvaII	GGWCC	5 cut(s)	17, 104, 614, 1952, 2090
BanI	GGYRCC	1 cut(s)	2137
BauI	CACGAG	2 cut(s)	1077, 1793
BbsI	GAAGAC	3 cut(s)	69, 174, 684
Bbv12I	GWGCWC	1 cut(s)	1794
BbvCI	CCTCAGC	1 cut(s)	780
BbvI	GCAGC	9 cut(s)	224, 311, 1303, 1453, 1636, 1639, 1778, 1787, 1852
BccI	CCATC	4 cut(s)	625, 731, 1796, 2156
BceAI	ACGGC	3 cut(s)	176, 434, 523
BcgI	CGANNNNNNTGC	4 cut(s)	206, 240, 1323, 1357
BciT130I	CCWGG	2 cut(s)	292, 1872
BcoDI	GTCTC	2 cut(s)	1016, 1835
BfaI	CTAG	4 cut(s)	126, 686, 1361, 2197
BfmI	CTRYAG	4 cut(s)	1299, 1317, 1626, 1773
BfuAI	ACCTGC	2 cut(s)	1166, 1780
BglI	GCCNNNNNGGC	1 cut(s)	1717
BmcAI	AGTACT	2 cut(s)	502, 861
Bme1390I	CCNGG	2 cut(s)	292, 1872
Bme18I	GGWCC	5 cut(s)	17, 104, 614, 1952, 2090
BmeT110I	CYCGRG	2 cut(s)	323, 2093
BmgT120I	GGNCC	5 cut(s)	17, 104, 614, 1952, 2090
BmiI	GGNNCC	5 cut(s)	18, 105, 106, 2092, 2139
BmrFI	CCNGG	2 cut(s)	292, 1872
BpiI	GAAGAC	3 cut(s)	69, 174, 684
BpmI	CTGGAG	2 cut(s)	440, 1391
Bpu10I	CCTNAGC	1 cut(s)	780
BpuEI	CTTGAG	3 cut(s)	317, 915, 930
BsaAI	YACGTR	1 cut(s)	550
BsaJI	CCNNGG	6 cut(s)	12, 290, 610, 1200, 1377, 1870
BsaWI	WCCGGW	2 cut(s)	634, 1949
Bsc4I	CCNNNNNNNGG	6 cut(s)	101, 325, 691, 935, 1476, 2147
Bse118I	RCCGGY	1 cut(s)	58
Bse1I	ACTGG	6 cut(s)	26, 183, 313, 1332, 1408, 1462
BseBI	CCWGG	2 cut(s)	292, 1872
BseDI	CCNNGG	6 cut(s)	12, 290, 610, 1200, 1377, 1870
BseLI	CCNNNNNNNGG	6 cut(s)	101, 325, 691, 935, 1476, 2147
BseMII	CTCAG	6 cut(s)	771, 974, 1647, 1737, 1947, 2115
BseNI	ACTGG	6 cut(s)	26, 183, 313, 1332, 1408, 1462
BseRI	GAGGAG	1 cut(s)	1763
BseX3I	CGGCCG	1 cut(s)	60
BseXI	GCAGC	9 cut(s)	224, 311, 1303, 1453, 1636, 1639, 1778, 1787, 1852
Bsh1236I	CGCG	4 cut(s)	561, 852, 1060, 1202
Bsh1285I	CGRYCG	1 cut(s)	63
BshFI	GGCC	2 cut(s)	62, 393
BshNI	GGYRCC	1 cut(s)	2137
BsiEI	CGRYCG	1 cut(s)	63
BsiHKAI	GWGCWC	1 cut(s)	1794
BsiHKCI	CYCGRG	2 cut(s)	323, 2093
BsiSI	CCGG	4 cut(s)	59, 63, 635, 1950
BslFI	GGGAC	4 cut(s)	90, 171, 251, 2076
BslI	CCNNNNNNNGG	6 cut(s)	101, 325, 691, 935, 1476, 2147
BsmAI	GTCTC	2 cut(s)	1016, 1835
BsmBI	CGTCTC	2 cut(s)	1016, 1835
BsmFI	GGGAC	4 cut(s)	90, 171, 251, 2076
BsmI	GAATGC	2 cut(s)	301, 1334
BsnI	GGCC	2 cut(s)	62, 393
BsoBI	CYCGRG	2 cut(s)	323, 2093
Bsp1286I	GDGCHC	1 cut(s)	1794
Bsp1407I	TGTACA	1 cut(s)	600
Bsp143I	GATC	4 cut(s)	490, 622, 688, 1230
Bsp19I	CCATGG	1 cut(s)	12
BspANI	GGCC	2 cut(s)	62, 393
BspCNI	CTCAG	6 cut(s)	772, 973, 1648, 1738, 1948, 2116
BspFNI	CGCG	4 cut(s)	561, 852, 1060, 1202
BspLI	GGNNCC	5 cut(s)	18, 105, 106, 2092, 2139
BspMAI	CTGCAG	2 cut(s)	1321, 1777
BspMI	ACCTGC	2 cut(s)	1166, 1780
BspT107I	GGYRCC	1 cut(s)	2137
BsrFI	RCCGGY	1 cut(s)	58
BsrGI	TGTACA	1 cut(s)	600
BsrI	ACTGG	6 cut(s)	26, 183, 313, 1332, 1408, 1462
BssAI	RCCGGY	1 cut(s)	58
BssECI	CCNNGG	6 cut(s)	12, 290, 610, 1200, 1377, 1870
BssMI	GATC	4 cut(s)	490, 622, 688, 1230
BssNAI	GTATAC	1 cut(s)	367
BssSI	CACGAG	2 cut(s)	1077, 1793
BssT1I	CCWWGG	2 cut(s)	12, 610
Bst1107I	GTATAC	1 cut(s)	367
Bst2BI	CACGAG	2 cut(s)	1077, 1793
Bst2UI	CCWGG	2 cut(s)	292, 1872
Bst4CI	ACNGT	9 cut(s)	147, 341, 433, 791, 1300, 1716, 1739, 1986, 2183
Bst6I	CTCTTC	3 cut(s)	1014, 1215, 1242
BstAPI	GCANNNNNTGC	4 cut(s)	1331, 1498, 1772, 1973
BstAUI	TGTACA	1 cut(s)	600
BstBAI	YACGTR	1 cut(s)	550
BstDEI	CTNAG	7 cut(s)	780, 960, 1356, 1656, 1746, 1956, 2124
BstDSI	CCRYGG	2 cut(s)	12, 1200
BstENI	CCTNNNNNAGG	2 cut(s)	689, 2145
BstFNI	CGCG	4 cut(s)	561, 852, 1060, 1202
BstHHI	GCGC	1 cut(s)	1060
BstKTI	GATC	4 cut(s)	493, 625, 691, 1233
BstMAI	GTCTC	2 cut(s)	1016, 1835
BstMBI	GATC	4 cut(s)	490, 622, 688, 1230
BstMCI	CGRYCG	1 cut(s)	63
BstMWI	GCNNNNNNNGC	9 cut(s)	731, 914, 1322, 1331, 1498, 1717, 1772, 1775, 1973
BstNI	CCWGG	2 cut(s)	292, 1872
BstNSI	RCATGY	1 cut(s)	388
BstSCI	CCNGG	2 cut(s)	290, 1870
BstSFI	CTRYAG	4 cut(s)	1299, 1317, 1626, 1773
BstUI	CGCG	4 cut(s)	561, 852, 1060, 1202
BstV1I	GCAGC	9 cut(s)	224, 311, 1303, 1453, 1636, 1639, 1778, 1787, 1852
BstV2I	GAAGAC	3 cut(s)	69, 174, 684
BstZ17I	GTATAC	1 cut(s)	367
BstZI	CGGCCG	1 cut(s)	60
BsuRI	GGCC	2 cut(s)	62, 393
BtgI	CCRYGG	2 cut(s)	12, 1200
BtgZI	GCGATG	1 cut(s)	2175
BtsI	GCAGTG	1 cut(s)	1536
BtsIMutI	CAGTG	4 cut(s)	1325, 1536, 1721, 1982
BveI	ACCTGC	2 cut(s)	1166, 1780
CaiI	CAGNNNCTG	3 cut(s)	1298, 1652, 1772
CfoI	GCGC	1 cut(s)	1060
Cfr10I	RCCGGY	1 cut(s)	58
Cfr13I	GGNCC	5 cut(s)	17, 104, 614, 1952, 2090
Cfr42I	CCGCGG	1 cut(s)	1203
CseI	GACGC	1 cut(s)	253
Csp6I	GTAC	5 cut(s)	277, 382, 501, 601, 860
CspCI	CAANNNNNGTGG	2 cut(s)	451, 486
CviAII	CATG	8 cut(s)	13, 385, 446, 719, 747, 754, 1339, 1963
CviQI	GTAC	5 cut(s)	277, 382, 501, 601, 860
DdeI	CTNAG	7 cut(s)	780, 960, 1356, 1656, 1746, 1956, 2124
DpnI	GATC	4 cut(s)	492, 624, 690, 1232
DpnII	GATC	4 cut(s)	490, 622, 688, 1230
DraI	TTTAAA	1 cut(s)	657
EaeI	YGGCCR	2 cut(s)	60, 391
EagI	CGGCCG	1 cut(s)	60
Eam1104I	CTCTTC	3 cut(s)	1014, 1215, 1242
EarI	CTCTTC	3 cut(s)	1014, 1215, 1242
EciI	GGCGGA	3 cut(s)	12, 123, 276
EclXI	CGGCCG	1 cut(s)	60
Eco130I	CCWWGG	2 cut(s)	12, 610
Eco47I	GGWCC	5 cut(s)	17, 104, 614, 1952, 2090
Eco52I	CGGCCG	1 cut(s)	60
Eco57I	CTGAAG	4 cut(s)	440, 1767, 1932, 2166
Eco88I	CYCGRG	2 cut(s)	323, 2093
EcoNI	CCTNNNNNAGG	2 cut(s)	689, 2145
EcoO109I	RGGNCCY	2 cut(s)	17, 104
EcoRI	GAATTC	1 cut(s)	1136
EcoRII	CCWGG	2 cut(s)	290, 1870
EcoT14I	CCWWGG	2 cut(s)	12, 610
EcoT22I	ATGCAT	1 cut(s)	1336
ErhI	CCWWGG	2 cut(s)	12, 610
Esp3I	CGTCTC	2 cut(s)	1016, 1835
FaeI	CATG	8 cut(s)	16, 388, 449, 722, 750, 757, 1342, 1966
FalI	AAGNNNNNCTT	8 cut(s)	687, 719, 714, 746, 1101, 1133, 1248, 1280
FaqI	GGGAC	4 cut(s)	90, 171, 251, 2076
FatI	CATG	8 cut(s)	12, 384, 445, 718, 746, 753, 1338, 1962
FauI	CCCGC	3 cut(s)	117, 196, 857
FauNDI	CATATG	1 cut(s)	888
FblI	GTMKAC	1 cut(s)	366
FspBI	CTAG	4 cut(s)	126, 686, 1361, 2197
GlaI	GCGC	1 cut(s)	1059
GsuI	CTGGAG	2 cut(s)	440, 1391
HaeIII	GGCC	2 cut(s)	62, 393
HapII	CCGG	4 cut(s)	59, 63, 635, 1950
HgaI	GACGC	1 cut(s)	253
HhaI	GCGC	1 cut(s)	1060
Hin1II	CATG	8 cut(s)	16, 388, 449, 722, 750, 757, 1342, 1966
Hin6I	GCGC	1 cut(s)	1058
HinP1I	GCGC	1 cut(s)	1058
HincII	GTYRAC	3 cut(s)	196, 520, 942
HindII	GTYRAC	3 cut(s)	196, 520, 942
HindIII	AAGCTT	2 cut(s)	650, 723
HpaI	GTTAAC	2 cut(s)	196, 520
HpaII	CCGG	4 cut(s)	59, 63, 635, 1950
HphI	GGTGA	5 cut(s)	544, 578, 803, 1190, 1472
Hpy166II	GTNNAC	7 cut(s)	196, 279, 367, 520, 535, 547, 942
Hpy8I	GTNNAC	7 cut(s)	196, 279, 367, 520, 535, 547, 942
Hpy99I	CGWCG	2 cut(s)	73, 76
HpyAV	CCTTC	9 cut(s)	123, 889, 1170, 1673, 1791, 1907, 2039, 2112, 2141
HpyCH4III	ACNGT	9 cut(s)	147, 341, 433, 791, 1300, 1716, 1739, 1986, 2183
HpyCH4IV	ACGT	5 cut(s)	68, 549, 1025, 2037, 2132
HpyF10VI	GCNNNNNNNGC	9 cut(s)	731, 914, 1322, 1331, 1498, 1717, 1772, 1775, 1973
HpyF3I	CTNAG	7 cut(s)	780, 960, 1356, 1656, 1746, 1956, 2124
HpySE526I	ACGT	5 cut(s)	68, 549, 1025, 2037, 2132
Hsp92II	CATG	8 cut(s)	16, 388, 449, 722, 750, 757, 1342, 1966
HspAI	GCGC	1 cut(s)	1058
KflI	GGGWCCC	1 cut(s)	104
KspAI	GTTAAC	2 cut(s)	196, 520
KspI	CCGCGG	1 cut(s)	1203
Kzo9I	GATC	4 cut(s)	490, 622, 688, 1230
LmnI	GCTCC	5 cut(s)	180, 307, 377, 421, 1094
Lsp1109I	GCAGC	9 cut(s)	224, 311, 1303, 1453, 1636, 1639, 1778, 1787, 1852
MaeI	CTAG	4 cut(s)	126, 686, 1361, 2197
MaeII	ACGT	5 cut(s)	68, 549, 1025, 2037, 2132
MaeIII	GTNAC	4 cut(s)	799, 1633, 1663, 2192
MalI	GATC	4 cut(s)	492, 624, 690, 1232
MboI	GATC	4 cut(s)	490, 622, 688, 1230
MhlI	GDGCHC	1 cut(s)	1794
MluCI	AATT	3 cut(s)	356, 1136, 1259
MluI	ACGCGT	1 cut(s)	559
MlyI	GAGTC	5 cut(s)	29, 937, 1199, 1514, 1598
MmeI	TCCRAC	2 cut(s)	452, 1398
Mph1103I	ATGCAT	1 cut(s)	1336
MseI	TTAA	5 cut(s)	195, 519, 656, 864, 1991
MspA1I	CMGCKG	2 cut(s)	1202, 1649
MspI	CCGG	4 cut(s)	59, 63, 635, 1950
MspR9I	CCNGG	2 cut(s)	292, 1872
Mva1269I	GAATGC	2 cut(s)	301, 1334
MvaI	CCWGG	2 cut(s)	292, 1872
MvnI	CGCG	4 cut(s)	561, 852, 1060, 1202
MwoI	GCNNNNNNNGC	9 cut(s)	731, 914, 1322, 1331, 1498, 1717, 1772, 1775, 1973
NcoI	CCATGG	1 cut(s)	12
NdeI	CATATG	1 cut(s)	888
NdeII	GATC	4 cut(s)	490, 622, 688, 1230
NlaIII	CATG	8 cut(s)	16, 388, 449, 722, 750, 757, 1342, 1966
NlaIV	GGNNCC	5 cut(s)	18, 105, 106, 2092, 2139
NsiI	ATGCAT	1 cut(s)	1336
NspI	RCATGY	1 cut(s)	388
PaeR7I	CTCGAG	1 cut(s)	323
PaqCI	CACCTGC	2 cut(s)	1166, 1780
PciI	ACATGT	1 cut(s)	384
PcsI	WCGNNNNNNNCGW	5 cut(s)	77, 204, 366, 405, 513
PctI	GAATGC	2 cut(s)	301, 1334
PleI	GAGTC	5 cut(s)	29, 937, 1199, 1513, 1598
PpsI	GAGTC	5 cut(s)	29, 937, 1199, 1513, 1598
Ppu21I	YACGTR	1 cut(s)	550
PpuMI	RGGWCCY	2 cut(s)	17, 104
PscI	ACATGT	1 cut(s)	384
Psp5II	RGGWCCY	2 cut(s)	17, 104
Psp6I	CCWGG	2 cut(s)	290, 1870
PspGI	CCWGG	2 cut(s)	290, 1870
PspN4I	GGNNCC	5 cut(s)	18, 105, 106, 2092, 2139
PspPI	GGNCC	5 cut(s)	17, 104, 614, 1952, 2090
PspPPI	RGGWCCY	2 cut(s)	17, 104
PspXI	VCTCGAGB	1 cut(s)	323
PstI	CTGCAG	2 cut(s)	1321, 1777
PstNI	CAGNNNCTG	3 cut(s)	1298, 1652, 1772
PvuII	CAGCTG	1 cut(s)	1649
RsaI	GTAC	5 cut(s)	278, 383, 502, 602, 861
RsaNI	GTAC	5 cut(s)	277, 382, 501, 601, 860
SacII	CCGCGG	1 cut(s)	1203
SaqAI	TTAA	5 cut(s)	195, 519, 656, 864, 1991
Sau3AI	GATC	4 cut(s)	490, 622, 688, 1230
Sau96I	GGNCC	5 cut(s)	17, 104, 614, 1952, 2090
ScaI	AGTACT	2 cut(s)	502, 861
SchI	GAGTC	5 cut(s)	29, 937, 1199, 1514, 1598
ScrFI	CCNGG	2 cut(s)	292, 1872
SduI	GDGCHC	1 cut(s)	1794
SfcI	CTRYAG	4 cut(s)	1299, 1317, 1626, 1773
Sfr274I	CTCGAG	1 cut(s)	323
Sfr303I	CCGCGG	1 cut(s)	1203
SgrBI	CCGCGG	1 cut(s)	1203
SinI	GGWCC	5 cut(s)	17, 104, 614, 1952, 2090
SlaI	CTCGAG	1 cut(s)	323
SmlI	CTYRAG	4 cut(s)	323, 332, 930, 945
SmoI	CTYRAG	4 cut(s)	323, 332, 930, 945
Sse9I	AATT	3 cut(s)	356, 1136, 1259
SspMI	CTAG	4 cut(s)	126, 686, 1361, 2197
StyD4I	CCNGG	2 cut(s)	290, 1870
StyI	CCWWGG	2 cut(s)	12, 610
TaaI	ACNGT	9 cut(s)	147, 341, 433, 791, 1300, 1716, 1739, 1986, 2183
TaiI	ACGT	5 cut(s)	71, 552, 1028, 2040, 2135
TaqII	GACCGA	1 cut(s)	1161
TasI	AATT	3 cut(s)	356, 1136, 1259
TatI	WGTACW	3 cut(s)	500, 600, 859
TauI	GCSGC	1 cut(s)	253
Tru1I	TTAA	5 cut(s)	195, 519, 656, 864, 1991
Tru9I	TTAA	5 cut(s)	195, 519, 656, 864, 1991
TscAI	CASTG	4 cut(s)	1332, 1543, 1721, 1989
TseI	GCWGC	9 cut(s)	212, 299, 1316, 1466, 1649, 1652, 1766, 1775, 1865
TspDTI	ATGAA	8 cut(s)	104, 735, 905, 990, 1149, 1327, 1951, 2094
TspGWI	ACGGA	4 cut(s)	264, 294, 1859, 1900
TspRI	CASTG	4 cut(s)	1332, 1543, 1721, 1989
VpaK11BI	GGWCC	5 cut(s)	17, 104, 614, 1952, 2090
XagI	CCTNNNNNAGG	2 cut(s)	689, 2145
XapI	RAATTY	1 cut(s)	1136
XceI	RCATGY	1 cut(s)	388
XhoI	CTCGAG	1 cut(s)	323
XmiI	GTMKAC	1 cut(s)	366
XspI	CTAG	4 cut(s)	126, 686, 1361, 2197
ZrmI	AGTACT	2 cut(s)	502, 861
Zsp2I	ATGCAT	1 cut(s)	1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.