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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14090 AT5G14090 |
| fragaria_vesca | FvH4_4g23460 FvH4_6g53810 |
| malus_domestica | MD09G1008500.v1.1 MD13G1122400.v1.1 MD16G1122900.v1.1 MD17G1002300.v1.1 |
| prunus_persica | Prupe.1G222800_v2.0.a1 Prupe.1G222800_v2.0.a1 Prupe.3G308500_v2.0.a1 Prupe.3G308500_v2.0.a1 |
| pyrus_communis | pycom111g00680 pycom16g10510 |
| rosa_chinensis | RchiOBHm_Chr4g0429831 |
| rosa_laevigata | RLG00000007040 RLG00000022367 |
| rosa_multiflora | Rmu_co8344809.1_g000001 Rmu_sc0006762.1_g000005 Rmu_sc0012106.1_g000002 Rmu_sc0018638.1_g000001 Rmu_sc0018801.1_g000006 Rmu_sc0037594.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00076940 Rroxscaffold_5G00371590 |
| rosa_rugosa | Rorug02G0588700 Rorug02G0588800 Rorug04G0238500 Rorug04G0238500 Rorug04G0238500 |
| rosa_samantha | Rh2AG668000 Rh2BG679500 Rh2CG642300 Rh2DG693000 Rh4AG294700 Rh4BG301100 Rh4CG316300 Rh4DG298000 |
| rosa_wichuraiana | Rw2G054760 Rw4G025500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 5 cut(s) | 69, 142, 656, 761, 1106 |
| AcoI | YGGCCR | 1 cut(s) | 77 |
| AcsI | RAATTY | 3 cut(s) | 29, 185, 640 |
| AcuI | CTGAAG | 4 cut(s) | 383, 513, 888, 980 |
| AdeI | CACNNNGTG | 1 cut(s) | 470 |
| AfaI | GTAC | 4 cut(s) | 506, 564, 1037, 1155 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 411 |
| AgsI | TTSAA | 6 cut(s) | 50, 191, 367, 560, 851, 1078 |
| AhlI | ACTAGT | 1 cut(s) | 749 |
| AjiI | CACGTC | 1 cut(s) | 1162 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 528, 560 |
| AluBI | AGCT | 7 cut(s) | 7, 235, 370, 378, 692, 881, 964 |
| AluI | AGCT | 7 cut(s) | 7, 235, 370, 378, 692, 881, 964 |
| Alw21I | GWGCWC | 3 cut(s) | 24, 578, 1095 |
| Alw26I | GTCTC | 2 cut(s) | 401, 435 |
| Alw44I | GTGCAC | 1 cut(s) | 20 |
| AlwI | GGATC | 5 cut(s) | 69, 142, 656, 761, 1106 |
| AoxI | GGCC | 2 cut(s) | 77, 402 |
| ApaLI | GTGCAC | 1 cut(s) | 20 |
| ApeKI | GCWGC | 1 cut(s) | 4 |
| ApoI | RAATTY | 3 cut(s) | 29, 185, 640 |
| AspA2I | CCTAGG | 1 cut(s) | 155 |
| AspS9I | GGNCC | 4 cut(s) | 163, 549, 624, 1017 |
| AsuHPI | GGTGA | 3 cut(s) | 244, 803, 983 |
| AvaII | GGWCC | 4 cut(s) | 163, 549, 624, 1017 |
| AvrII | CCTAGG | 1 cut(s) | 155 |
| BaeGI | GKGCMC | 1 cut(s) | 24 |
| BalI | TGGCCA | 1 cut(s) | 79 |
| BanII | GRGCYC | 1 cut(s) | 740 |
| BbsI | GAAGAC | 1 cut(s) | 198 |
| Bbv12I | GWGCWC | 3 cut(s) | 24, 578, 1095 |
| BbvI | GCAGC | 1 cut(s) | 16 |
| BccI | CCATC | 5 cut(s) | 88, 125, 129, 436, 782 |
| BcoDI | GTCTC | 2 cut(s) | 401, 435 |
| BcuI | ACTAGT | 1 cut(s) | 749 |
| BfaI | CTAG | 3 cut(s) | 156, 750, 779 |
| BfmI | CTRYAG | 1 cut(s) | 876 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlnI | CCTAGG | 1 cut(s) | 155 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| BmcAI | AGTACT | 2 cut(s) | 506, 1155 |
| Bme18I | GGWCC | 4 cut(s) | 163, 549, 624, 1017 |
| BmgBI | CACGTC | 1 cut(s) | 1162 |
| BmgT120I | GGNCC | 4 cut(s) | 163, 549, 624, 1017 |
| BmiI | GGNNCC | 2 cut(s) | 550, 1018 |
| BmsI | GCATC | 2 cut(s) | 88, 806 |
| BpiI | GAAGAC | 1 cut(s) | 198 |
| BpmI | CTGGAG | 1 cut(s) | 913 |
| BpuEI | CTTGAG | 1 cut(s) | 41 |
| BsaAI | YACGTR | 1 cut(s) | 842 |
| BsaJI | CCNNGG | 1 cut(s) | 155 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 411 |
| Bse1I | ACTGG | 5 cut(s) | 285, 293, 930, 1100, 1161 |
| Bse3DI | GCAATG | 1 cut(s) | 1075 |
| BseDI | CCNNGG | 1 cut(s) | 155 |
| BseGI | GGATG | 5 cut(s) | 117, 215, 757, 774, 862 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 411 |
| BseMI | GCAATG | 1 cut(s) | 1075 |
| BseMII | CTCAG | 3 cut(s) | 79, 324, 567 |
| BseNI | ACTGG | 5 cut(s) | 285, 293, 930, 1100, 1161 |
| BseSI | GKGCMC | 1 cut(s) | 24 |
| BseXI | GCAGC | 1 cut(s) | 16 |
| BseYI | CCCAGC | 1 cut(s) | 474 |
| BshFI | GGCC | 2 cut(s) | 79, 404 |
| BsiHKAI | GWGCWC | 3 cut(s) | 24, 578, 1095 |
| BslFI | GGGAC | 2 cut(s) | 510, 1030 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 411 |
| BsmAI | GTCTC | 2 cut(s) | 401, 435 |
| BsmFI | GGGAC | 2 cut(s) | 510, 1030 |
| BsmI | GAATGC | 1 cut(s) | 1132 |
| BsnI | GGCC | 2 cut(s) | 79, 404 |
| Bsp1286I | GDGCHC | 4 cut(s) | 24, 578, 740, 1095 |
| Bsp143I | GATC | 5 cut(s) | 61, 134, 661, 766, 1098 |
| BspANI | GGCC | 2 cut(s) | 79, 404 |
| BspCNI | CTCAG | 3 cut(s) | 78, 325, 566 |
| BspLI | GGNNCC | 2 cut(s) | 550, 1018 |
| BspPI | GGATC | 5 cut(s) | 69, 142, 656, 761, 1106 |
| BspQI | GCTCTTC | 1 cut(s) | 1083 |
| BsrDI | GCAATG | 1 cut(s) | 1075 |
| BsrI | ACTGG | 5 cut(s) | 285, 293, 930, 1100, 1161 |
| BssECI | CCNNGG | 1 cut(s) | 155 |
| BssMI | GATC | 5 cut(s) | 61, 134, 661, 766, 1098 |
| BssT1I | CCWWGG | 1 cut(s) | 155 |
| Bst4CI | ACNGT | 6 cut(s) | 15, 446, 509, 517, 1028, 1118 |
| Bst6I | CTCTTC | 5 cut(s) | 495, 644, 733, 969, 1083 |
| BstBAI | YACGTR | 1 cut(s) | 842 |
| BstDEI | CTNAG | 4 cut(s) | 65, 145, 333, 553 |
| BstF5I | GGATG | 5 cut(s) | 117, 215, 757, 774, 862 |
| BstKTI | GATC | 5 cut(s) | 64, 137, 664, 769, 1101 |
| BstMAI | GTCTC | 2 cut(s) | 401, 435 |
| BstMBI | GATC | 5 cut(s) | 61, 134, 661, 766, 1098 |
| BstNSI | RCATGY | 1 cut(s) | 1048 |
| BstSFI | CTRYAG | 1 cut(s) | 876 |
| BstSLI | GKGCMC | 1 cut(s) | 24 |
| BstSNI | TACGTA | 1 cut(s) | 842 |
| BstV1I | GCAGC | 1 cut(s) | 16 |
| BstV2I | GAAGAC | 1 cut(s) | 198 |
| BstX2I | RGATCY | 3 cut(s) | 61, 134, 661 |
| BstYI | RGATCY | 3 cut(s) | 61, 134, 661 |
| BsuRI | GGCC | 2 cut(s) | 79, 404 |
| BtrI | CACGTC | 1 cut(s) | 1162 |
| BtsCI | GGATG | 5 cut(s) | 117, 215, 757, 774, 862 |
| BtsIMutI | CAGTG | 7 cut(s) | 20, 292, 300, 522, 937, 1093, 1184 |
| Cfr13I | GGNCC | 4 cut(s) | 163, 549, 624, 1017 |
| CseI | GACGC | 1 cut(s) | 1118 |
| Csp6I | GTAC | 4 cut(s) | 505, 563, 1036, 1154 |
| CviAII | CATG | 7 cut(s) | 131, 242, 449, 697, 967, 1039, 1045 |
| CviQI | GTAC | 4 cut(s) | 505, 563, 1036, 1154 |
| DdeI | CTNAG | 4 cut(s) | 65, 145, 333, 553 |
| DpnI | GATC | 5 cut(s) | 63, 136, 663, 768, 1100 |
| DpnII | GATC | 5 cut(s) | 61, 134, 661, 766, 1098 |
| DraIII | CACNNNGTG | 1 cut(s) | 470 |
| EaeI | YGGCCR | 1 cut(s) | 77 |
| Eam1104I | CTCTTC | 5 cut(s) | 495, 644, 733, 969, 1083 |
| EarI | CTCTTC | 5 cut(s) | 495, 644, 733, 969, 1083 |
| Eco105I | TACGTA | 1 cut(s) | 842 |
| Eco130I | CCWWGG | 1 cut(s) | 155 |
| Eco24I | GRGCYC | 1 cut(s) | 740 |
| Eco47I | GGWCC | 4 cut(s) | 163, 549, 624, 1017 |
| Eco57I | CTGAAG | 4 cut(s) | 383, 513, 888, 980 |
| EcoO109I | RGGNCCY | 1 cut(s) | 549 |
| EcoT14I | CCWWGG | 1 cut(s) | 155 |
| EcoT38I | GRGCYC | 1 cut(s) | 740 |
| ErhI | CCWWGG | 1 cut(s) | 155 |
| FaeI | CATG | 7 cut(s) | 134, 245, 452, 700, 970, 1042, 1048 |
| FaqI | GGGAC | 2 cut(s) | 510, 1030 |
| FatI | CATG | 7 cut(s) | 130, 241, 448, 696, 966, 1038, 1044 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| FokI | GGATG | 5 cut(s) | 104, 202, 744, 761, 849 |
| FriOI | GRGCYC | 1 cut(s) | 740 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| FspBI | CTAG | 3 cut(s) | 156, 750, 779 |
| GluI | GCNGC | 1 cut(s) | 5 |
| GsaI | CCCAGC | 1 cut(s) | 478 |
| GsuI | CTGGAG | 1 cut(s) | 913 |
| HaeIII | GGCC | 2 cut(s) | 79, 404 |
| HgaI | GACGC | 1 cut(s) | 1118 |
| Hin1II | CATG | 7 cut(s) | 134, 245, 452, 700, 970, 1042, 1048 |
| HinfI | GANTC | 5 cut(s) | 420, 488, 803, 955, 998 |
| HphI | GGTGA | 3 cut(s) | 244, 803, 983 |
| Hpy166II | GTNNAC | 2 cut(s) | 22, 290 |
| Hpy188I | TCNGA | 5 cut(s) | 85, 184, 493, 802, 960 |
| Hpy188III | TCNNGA | 3 cut(s) | 646, 866, 1137 |
| Hpy8I | GTNNAC | 2 cut(s) | 22, 290 |
| HpyAV | CCTTC | 5 cut(s) | 154, 197, 410, 863, 978 |
| HpyCH4III | ACNGT | 6 cut(s) | 15, 446, 509, 517, 1028, 1118 |
| HpyCH4IV | ACGT | 3 cut(s) | 140, 841, 1161 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 22, 311, 512, 1132 |
| HpyF3I | CTNAG | 4 cut(s) | 65, 145, 333, 553 |
| HpySE526I | ACGT | 3 cut(s) | 140, 841, 1161 |
| Hsp92II | CATG | 7 cut(s) | 134, 245, 452, 700, 970, 1042, 1048 |
| Kzo9I | GATC | 5 cut(s) | 61, 134, 661, 766, 1098 |
| LguI | GCTCTTC | 1 cut(s) | 1083 |
| Lsp1109I | GCAGC | 1 cut(s) | 16 |
| LweI | GCATC | 2 cut(s) | 88, 806 |
| MaeI | CTAG | 3 cut(s) | 156, 750, 779 |
| MaeII | ACGT | 3 cut(s) | 140, 841, 1161 |
| MaeIII | GTNAC | 4 cut(s) | 9, 295, 349, 932 |
| MalI | GATC | 5 cut(s) | 63, 136, 663, 768, 1100 |
| MboI | GATC | 5 cut(s) | 61, 134, 661, 766, 1098 |
| MflI | RGATCY | 3 cut(s) | 61, 134, 661 |
| MhlI | GDGCHC | 4 cut(s) | 24, 578, 740, 1095 |
| MlsI | TGGCCA | 1 cut(s) | 79 |
| MluCI | AATT | 4 cut(s) | 29, 185, 640, 891 |
| MluNI | TGGCCA | 1 cut(s) | 79 |
| MlyI | GAGTC | 3 cut(s) | 414, 482, 1007 |
| MmeI | TCCRAC | 1 cut(s) | 785 |
| MnlI | CCTC | 9 cut(s) | 63, 384, 478, 539, 562, 736, 787, 1006, 1059 |
| Mox20I | TGGCCA | 1 cut(s) | 79 |
| MscI | TGGCCA | 1 cut(s) | 79 |
| MseI | TTAA | 2 cut(s) | 329, 1007 |
| MslI | CAYNNNNRTG | 2 cut(s) | 129, 1043 |
| Msp20I | TGGCCA | 1 cut(s) | 79 |
| MspA1I | CMGCKG | 1 cut(s) | 7 |
| Mva1269I | GAATGC | 1 cut(s) | 1132 |
| NdeII | GATC | 5 cut(s) | 61, 134, 661, 766, 1098 |
| NlaIII | CATG | 7 cut(s) | 134, 245, 452, 700, 970, 1042, 1048 |
| NlaIV | GGNNCC | 2 cut(s) | 550, 1018 |
| NmeAIII | GCCGAG | 1 cut(s) | 430 |
| NmuCI | GTSAC | 3 cut(s) | 295, 349, 932 |
| NspI | RCATGY | 1 cut(s) | 1048 |
| PciSI | GCTCTTC | 1 cut(s) | 1083 |
| PctI | GAATGC | 1 cut(s) | 1132 |
| PfeI | GAWTC | 2 cut(s) | 803, 955 |
| PflFI | GACNNNGTC | 1 cut(s) | 423 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PleI | GAGTC | 3 cut(s) | 414, 482, 1006 |
| PpsI | GAGTC | 3 cut(s) | 414, 482, 1006 |
| Ppu21I | YACGTR | 1 cut(s) | 842 |
| PpuMI | RGGWCCY | 1 cut(s) | 549 |
| Psp5II | RGGWCCY | 1 cut(s) | 549 |
| PspFI | CCCAGC | 1 cut(s) | 474 |
| PspN4I | GGNNCC | 2 cut(s) | 550, 1018 |
| PspPI | GGNCC | 4 cut(s) | 163, 549, 624, 1017 |
| PspPPI | RGGWCCY | 1 cut(s) | 549 |
| PsuI | RGATCY | 3 cut(s) | 61, 134, 661 |
| PsyI | GACNNNGTC | 1 cut(s) | 423 |
| PvuII | CAGCTG | 1 cut(s) | 7 |
| RsaI | GTAC | 4 cut(s) | 506, 564, 1037, 1155 |
| RsaNI | GTAC | 4 cut(s) | 505, 563, 1036, 1154 |
| RseI | CAYNNNNRTG | 2 cut(s) | 129, 1043 |
| SapI | GCTCTTC | 1 cut(s) | 1083 |
| SaqAI | TTAA | 2 cut(s) | 329, 1007 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 5 cut(s) | 61, 134, 661, 766, 1098 |
| Sau96I | GGNCC | 4 cut(s) | 163, 549, 624, 1017 |
| ScaI | AGTACT | 2 cut(s) | 506, 1155 |
| SchI | GAGTC | 3 cut(s) | 414, 482, 1007 |
| SduI | GDGCHC | 4 cut(s) | 24, 578, 740, 1095 |
| SfaNI | GCATC | 2 cut(s) | 88, 806 |
| SfcI | CTRYAG | 1 cut(s) | 876 |
| SinI | GGWCC | 4 cut(s) | 163, 549, 624, 1017 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 129, 1043 |
| SmlI | CTYRAG | 1 cut(s) | 56 |
| SmoI | CTYRAG | 1 cut(s) | 56 |
| SnaBI | TACGTA | 1 cut(s) | 842 |
| SpeI | ACTAGT | 1 cut(s) | 749 |
| Sse9I | AATT | 4 cut(s) | 29, 185, 640, 891 |
| SspMI | CTAG | 3 cut(s) | 156, 750, 779 |
| StyI | CCWWGG | 1 cut(s) | 155 |
| TaaI | ACNGT | 6 cut(s) | 15, 446, 509, 517, 1028, 1118 |
| TaiI | ACGT | 3 cut(s) | 143, 844, 1164 |
| TaqI | TCGA | 1 cut(s) | 645 |
| TasI | AATT | 4 cut(s) | 29, 185, 640, 891 |
| TatI | WGTACW | 3 cut(s) | 504, 1035, 1153 |
| TfiI | GAWTC | 2 cut(s) | 803, 955 |
| Tru1I | TTAA | 2 cut(s) | 329, 1007 |
| Tru9I | TTAA | 2 cut(s) | 329, 1007 |
| TscAI | CASTG | 7 cut(s) | 20, 292, 300, 522, 937, 1100, 1184 |
| TseFI | GTSAC | 3 cut(s) | 295, 349, 932 |
| TseI | GCWGC | 1 cut(s) | 4 |
| Tsp45I | GTSAC | 3 cut(s) | 295, 349, 932 |
| TspDTI | ATGAA | 5 cut(s) | 230, 513, 713, 851, 1101 |
| TspGWI | ACGGA | 1 cut(s) | 208 |
| TspRI | CASTG | 7 cut(s) | 20, 292, 300, 522, 937, 1100, 1184 |
| Tth111I | GACNNNGTC | 1 cut(s) | 423 |
| VneI | GTGCAC | 1 cut(s) | 20 |
| VpaK11BI | GGWCC | 4 cut(s) | 163, 549, 624, 1017 |
| XapI | RAATTY | 3 cut(s) | 29, 185, 640 |
| XceI | RCATGY | 1 cut(s) | 1048 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 128 |
| XmaJI | CCTAGG | 1 cut(s) | 155 |
| XspI | CTAG | 3 cut(s) | 156, 750, 779 |
| ZrmI | AGTACT | 2 cut(s) | 506, 1155 |